View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7894_low_33 (Length: 287)
Name: NF7894_low_33
Description: NF7894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7894_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 9 - 270
Target Start/End: Complemental strand, 32297961 - 32297700
Alignment:
| Q |
9 |
ggtgttcatgtctgcgttcatggtttatacattatagattatgattcttctataaggccggcaccatcgacatatataaccactgaaacagtgtggacaa |
108 |
Q |
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| T |
32297961 |
ggtgttcatgtctgtgttcgtggtttatacattatagattatgattcttctataaggccggcaccatcaacatatataaccactgaaacagtgtggacaa |
32297862 |
T |
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| Q |
109 |
tgtgatctaatggacatggatacattgctatctccacatttattttcttggcatgttcctaaccccctagccttgtctttttcgttagatgtactataaa |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
32297861 |
tgtgatctaatggacatggatacattgctatctccacatttattttcttggcatgttcctaaccccctagccttgtctttttcgttagatgtactacaaa |
32297762 |
T |
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| Q |
209 |
tgatgttatttccttctagttatagttattttcctatgcataatccaaagtgattcctgtat |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32297761 |
tgatgttatttccttctagttatagttattttcctatgcataatccaaagtgattcctgtat |
32297700 |
T |
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