View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7898_low_6 (Length: 347)
Name: NF7898_low_6
Description: NF7898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7898_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 10 - 330
Target Start/End: Complemental strand, 1911771 - 1911450
Alignment:
| Q |
10 |
aataatatctctcaaaaa-gattagctttttacgaaaattaattggacaaatggaatgtgctatgttgggcacctaaagtgacataactttgaggtcccc |
108 |
Q |
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| T |
1911771 |
aataatatctctcaaaaaagattagcttttaccgaaaattaattggacaaatggaatgtgctatgttgggcacctaaagtgacataactttgaggtcccc |
1911672 |
T |
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| Q |
109 |
acgtgaaaaagatattgacccaagtgttgtgtgtttctgctggtttcttttgtttttcttggtcatcttagattcacctatgttgttgttaagtataatt |
208 |
Q |
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| T |
1911671 |
acgtgaaaaagatattgacccaagtgttgtgtgtttctgctggtttcttttgtttttcttggtcatcttagattcacctatgttgttgttaagtataatt |
1911572 |
T |
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| Q |
209 |
agaatcttgtacgtattattttattgaggttgtaataaacaaatcatctaggattctgttaactaggattttatgaatttaaaaatggatattcttttct |
308 |
Q |
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| T |
1911571 |
agaatcttgtacgtattattttattgaggttgtaataaacaaatcatctaggattctgttaactaggattttatgaatttaaaaatggatattcttttct |
1911472 |
T |
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| Q |
309 |
cagttttgtcgatattattcgt |
330 |
Q |
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|||||||||||||||||||||| |
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| T |
1911471 |
cagttttgtcgatattattcgt |
1911450 |
T |
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