View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7901_low_17 (Length: 257)
Name: NF7901_low_17
Description: NF7901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7901_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 35289930 - 35290156
Alignment:
| Q |
18 |
ccctttgcatcatgatcattccaagttccaacaccatgactctctgtctctctctggctaaaacttgttttttcctcattcattttctatgtaaccatcg |
117 |
Q |
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| T |
35289930 |
ccctttgcatcatgatcataccaagttccaacaccatgactctctgtctctctctggctaaaacttgttttttcctcattcattttctatgtaaccatcg |
35290029 |
T |
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| Q |
118 |
cactgtttaaaaaataaacacagcatattctctaatgatagctgtaccttattaagcctattcattttcttctccaagagaatactagaacttaatatat |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
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| T |
35290030 |
cactgtttaaaaaataaacacagcatattctctaatgatagctgtaccttattaagcctattcattttcttctccaagaaaatactagaatttaatatat |
35290129 |
T |
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| Q |
218 |
aagaacttaacaaaagaactaacacca |
244 |
Q |
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||||||||||||||||||||||||||| |
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| T |
35290130 |
aagaacttaacaaaagaactaacacca |
35290156 |
T |
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