View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7905_high_1 (Length: 462)

Name: NF7905_high_1
Description: NF7905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7905_high_1
NF7905_high_1
[»] chr6 (11 HSPs)
chr6 (19-462)||(3632481-3632924)
chr6 (216-298)||(10100428-10100510)
chr6 (216-290)||(5258721-5258795)
chr6 (220-288)||(9706415-9706483)
chr6 (216-297)||(27790786-27790867)
chr6 (250-298)||(33495836-33495884)
chr6 (231-290)||(5631454-5631513)
chr6 (216-270)||(2689313-2689367)
chr6 (216-290)||(20428207-20428281)
chr6 (379-447)||(30670365-30670433)
chr6 (388-436)||(26291270-26291318)
[»] chr3 (18 HSPs)
chr3 (228-447)||(19736643-19736865)
chr3 (216-297)||(19757698-19757779)
chr3 (226-298)||(51448290-51448362)
chr3 (226-298)||(52138457-52138529)
chr3 (216-298)||(38849723-38849805)
chr3 (226-298)||(47542292-47542364)
chr3 (216-290)||(25191016-25191090)
chr3 (216-294)||(27917205-27917283)
chr3 (216-296)||(48221415-48221495)
chr3 (369-447)||(19757461-19757539)
chr3 (228-298)||(29817134-29817204)
chr3 (220-280)||(26489964-26490024)
chr3 (232-298)||(43111606-43111669)
chr3 (213-252)||(54425474-54425513)
chr3 (222-271)||(28245093-28245142)
chr3 (219-280)||(30724374-30724435)
chr3 (216-277)||(44395080-44395141)
chr3 (253-281)||(1470705-1470733)
[»] chr5 (23 HSPs)
chr5 (226-298)||(20318620-20318692)
chr5 (216-290)||(3301486-3301560)
chr5 (216-290)||(3394347-3394421)
chr5 (216-298)||(16347973-16348055)
chr5 (226-298)||(2076055-2076127)
chr5 (226-298)||(1274894-1274966)
chr5 (226-298)||(10638926-10638998)
chr5 (226-298)||(12492968-12493040)
chr5 (226-298)||(24178153-24178225)
chr5 (226-298)||(28977438-28977510)
chr5 (227-290)||(1288171-1288234)
chr5 (216-292)||(17341772-17341848)
chr5 (218-280)||(25937719-25937781)
chr5 (227-297)||(27302529-27302599)
chr5 (228-281)||(43558397-43558450)
chr5 (254-328)||(37124168-37124243)
chr5 (255-297)||(23979862-23979904)
chr5 (216-281)||(6368496-6368561)
chr5 (255-299)||(27558-27602)
chr5 (379-435)||(43558543-43558599)
chr5 (377-432)||(35685345-35685400)
chr5 (216-298)||(36200411-36200493)
chr5 (377-434)||(27420-27477)
[»] chr4 (27 HSPs)
chr4 (226-298)||(48623108-48623180)
chr4 (226-298)||(435858-435930)
chr4 (226-298)||(23906882-23906954)
chr4 (226-298)||(31960395-31960467)
chr4 (226-298)||(48174674-48174746)
chr4 (226-297)||(33226839-33226910)
chr4 (216-298)||(47265775-47265857)
chr4 (226-298)||(1777596-1777668)
chr4 (226-298)||(56374919-56374991)
chr4 (226-298)||(53707423-53707495)
chr4 (217-288)||(27450745-27450816)
chr4 (216-290)||(16002566-16002639)
chr4 (227-305)||(41427461-41427539)
chr4 (350-439)||(54787953-54788043)
chr4 (377-439)||(55769111-55769173)
chr4 (231-280)||(7092798-7092847)
chr4 (226-447)||(10776000-10776224)
chr4 (254-299)||(17667935-17667980)
chr4 (233-281)||(30807244-30807292)
chr4 (228-275)||(33369419-33369466)
chr4 (369-447)||(8918039-8918117)
chr4 (231-273)||(50286625-50286667)
chr4 (231-293)||(55768963-55769025)
chr4 (231-293)||(55833219-55833281)
chr4 (377-439)||(55833367-55833429)
chr4 (230-279)||(20917630-20917679)
chr4 (383-439)||(41427335-41427391)
[»] chr1 (24 HSPs)
chr1 (226-298)||(8671549-8671621)
chr1 (222-298)||(43240958-43241034)
chr1 (226-298)||(51601687-51601759)
chr1 (216-290)||(32083316-32083390)
chr1 (216-447)||(37463436-37463667)
chr1 (226-298)||(1210374-1210446)
chr1 (216-281)||(34827673-34827738)
chr1 (226-298)||(49347974-49348047)
chr1 (216-280)||(7921574-7921638)
chr1 (226-298)||(51441345-51441417)
chr1 (216-295)||(12807658-12807737)
chr1 (226-299)||(52641035-52641105)
chr1 (216-298)||(27445527-27445609)
chr1 (339-439)||(7813980-7814080)
chr1 (254-298)||(32066877-32066921)
chr1 (220-296)||(46226887-46226963)
chr1 (219-273)||(19936175-19936229)
chr1 (369-431)||(35829120-35829182)
chr1 (227-280)||(40419328-40419381)
chr1 (216-296)||(35828964-35829044)
chr1 (226-281)||(28528227-28528282)
chr1 (369-436)||(52420919-52420986)
chr1 (228-287)||(16273415-16273471)
chr1 (252-292)||(32405091-32405131)
[»] chr8 (20 HSPs)
chr8 (226-298)||(36565822-36565894)
chr8 (226-297)||(12492423-12492494)
chr8 (216-290)||(15215841-15215915)
chr8 (220-290)||(42854579-42854649)
chr8 (230-298)||(36544781-36544849)
chr8 (216-290)||(4033065-4033139)
chr8 (213-293)||(13984669-13984749)
chr8 (234-297)||(29735447-29735510)
chr8 (382-445)||(30578968-30579031)
chr8 (228-298)||(18849698-18849768)
chr8 (226-305)||(28300689-28300765)
chr8 (350-439)||(19293988-19294078)
chr8 (216-291)||(25985178-25985251)
chr8 (372-439)||(6511107-6511174)
chr8 (226-280)||(8880015-8880069)
chr8 (226-328)||(41444885-41444987)
chr8 (254-299)||(38667187-38667232)
chr8 (390-435)||(41445051-41445096)
chr8 (253-281)||(3285135-3285163)
chr8 (367-447)||(13588917-13588997)
[»] chr7 (16 HSPs)
chr7 (226-298)||(37616545-37616617)
chr7 (226-298)||(46356432-46356504)
chr7 (219-290)||(32630244-32630315)
chr7 (216-290)||(36869860-36869934)
chr7 (229-298)||(33350390-33350459)
chr7 (226-298)||(31004853-31004924)
chr7 (226-298)||(36651623-36651695)
chr7 (226-298)||(49028896-49028968)
chr7 (216-283)||(38606649-38606716)
chr7 (226-298)||(11593589-11593661)
chr7 (226-298)||(39906960-39907032)
chr7 (216-298)||(48919017-48919099)
chr7 (230-298)||(24177780-24177848)
chr7 (388-447)||(36870035-36870094)
chr7 (216-281)||(43793611-43793676)
chr7 (216-280)||(21517895-21517959)
[»] chr2 (22 HSPs)
chr2 (226-298)||(2610157-2610229)
chr2 (226-290)||(38453201-38453265)
chr2 (219-290)||(45368198-45368268)
chr2 (216-290)||(11992677-11992751)
chr2 (216-290)||(41763620-41763694)
chr2 (226-298)||(4807221-4807293)
chr2 (216-290)||(24584177-24584251)
chr2 (216-297)||(37281739-37281820)
chr2 (226-298)||(8180409-8180481)
chr2 (216-287)||(13148953-13149024)
chr2 (223-299)||(36038848-36038924)
chr2 (231-297)||(23866285-23866351)
chr2 (228-290)||(30743260-30743322)
chr2 (369-430)||(35284816-35284877)
chr2 (255-298)||(12475031-12475074)
chr2 (226-272)||(452203-452249)
chr2 (217-281)||(876778-876842)
chr2 (254-305)||(17581094-17581145)
chr2 (255-305)||(13592958-13593008)
chr2 (228-274)||(14769943-14769989)
chr2 (258-298)||(3244259-3244299)
chr2 (226-290)||(3865709-3865773)
[»] scaffold0113 (1 HSPs)
scaffold0113 (216-298)||(12169-12251)
[»] scaffold0171 (1 HSPs)
scaffold0171 (221-298)||(5821-5898)
[»] scaffold0024 (1 HSPs)
scaffold0024 (213-298)||(82350-82435)
[»] scaffold0570 (1 HSPs)
scaffold0570 (226-290)||(2851-2915)
[»] scaffold0018 (1 HSPs)
scaffold0018 (226-298)||(31097-31169)
[»] scaffold0008 (1 HSPs)
scaffold0008 (371-436)||(48639-48704)
[»] scaffold0606 (1 HSPs)
scaffold0606 (228-281)||(9303-9356)
[»] scaffold0034 (1 HSPs)
scaffold0034 (223-280)||(110116-110173)


Alignment Details
Target: chr6 (Bit Score: 404; Significance: 0; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 19 - 462
Target Start/End: Complemental strand, 3632924 - 3632481
Alignment:
Q  19 caagtgtgcatgaaagtttcttttttctttataattttataaaaataatcgcgatcctaatgattatttacaactatctaaagtgggatttatactatgt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3632924 caagtgtgcatgaaagtttcttttttctttataattttataaaaataatcgcgatactaatgattatttacaactatctaaagtgggatttatactatgt 3632825  T
Q  119 ctttatgggttacataatcaagctcttacccctgagaaaacacctattggacaaaacatttgagacacttttccaattcaatcacttaggcagcttttac 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3632824 ctttatgggttacataatcaagctcttacccctgagaaaacacctattggacaaaacatttgagacacttttccaattcaatcacttaggcagcttttac 3632725  T
Q  219 tatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttttgtcatattatat 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  3632724 tatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttttgttaaattatat 3632625  T
Q  319 tccatatactatctcgctcatactcaagtagaagtcatacacttttgaggttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaa 418  Q
    || ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  3632624 tcaatatactatctcgcttatactcaagtagaagtcatacgcttttaaggttgtctcgatgtctccaatctcccattcaattcctcccctgactcttcaa 3632525  T
Q  419 gaaggactacatcatctgcaagaagcatagtgttgtgaaagtgc 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  3632524 gaaggactacatcatctgcaagaagcatagtgttgtgaaagtgc 3632481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 10100428 - 10100510
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  10100428 tactatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 10100510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 5258721 - 5258795
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||| ||||||||||||||  |||||| || ||||||||||||||||||||||||||| || ||||||||    
T  5258721 tactatggacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacttccaaggtaga 5258795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 9706483 - 9706415
Alignment:
Q  220 atggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggta 288  Q
    ||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||| ||| ||||||    
T  9706483 atggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctccaaggta 9706415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 27790867 - 27790786
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactactt 297  Q
    |||||||||||||||||||||||| | |||||||| | ||||  ||||| |||| || |||||||| | |||||||||||||    
T  27790867 tactatggatccaagatatttaaaccatgtaatttggagtattttatgacctcccaccttcacctccatggtagaactactt 27790786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 33495884 - 33495836
Alignment:
Q  250 tagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  33495884 tagggtatgatatgatcttcaactttcacctccaaggtagacctacttc 33495836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 5631513 - 5631454
Alignment:
Q  231 atatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||| ||||||| || ||||||||||||||||| |||||||||||  ||||||||    
T  5631513 atatttaaaccgtgtaacttggggtatgatatgatctctaactttcacctgcaaggtaga 5631454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 2689367 - 2689313
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctcca 270  Q
    |||||| || |||| ||||||||| ||||||| ||||||||||||||||||||||    
T  2689367 tactatagacccaaaatatttaaaccgtgtaacttagggtatgatatgatctcca 2689313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 20428207 - 20428281
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    |||| |||| |||| ||||||||| || |||| ||  |||||||||||||||||||||||||||||  |||||||    
T  20428207 tactgtggacccaatatatttaaaccgcgtaacttgtggtatgatatgatctccaactttcacctcctaggtaga 20428281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 30670433 - 30670365
Alignment:
Q  379 gtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaagaagcata 447  Q
    ||||| || ||||| ||||||||||||| ||||||  |||| | ||||||||||||||||| |||||||    
T  30670433 gtctctaacctcccgttcaattcctccctcgactcaccaagcaagactacatcatctgcaaaaagcata 30670365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 26291318 - 26291270
Alignment:
Q  388 ctcccattcaattcctcccacgactcttcaagaaggactacatcatctg 436  Q
    ||||||| ||||||||||| ||||| | |||| ||||||||||||||||    
T  26291318 ctcccatgcaattcctccctcgactttccaagcaggactacatcatctg 26291270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 228 - 447
Target Start/End: Complemental strand, 19736865 - 19736643
Alignment:
Q  228 aagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttttgtcatattatattccatatac 327  Q
    |||||||||||| | ||||| || |||||||||||||||||||||||||||||| ||||||| ||||||  |  ||||  | |  ||| |||||||||||    
T  19736865 aagatatttaaaccatgtaacttggggtatgatatgatctccaactttcacctccaaggtaggactactctgccttttgctgaagttacattccatatac 19736766  T
Q  328 tatctc--gctcatactcaagtagaagtcatacacttttgagg-ttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaagga 424  Q
    | | ||  |||  |||| | |  || | ||||||||| | ||| ||||||| ||||||| |||||||||||||||||||||| | ||||| |||| ||||    
T  19736765 tctgtcttgcttctactaaggcggatgccatacacttctaaggcttgtctctaagtctctaatctcccattcaattcctccctcaactctccaagcagga 19736666  T
Q  425 ctacatcatctgcaagaagcata 447  Q
    || |||||||||||| |||||||    
T  19736665 ctgcatcatctgcaaaaagcata 19736643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 19757779 - 19757698
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactactt 297  Q
    ||||||||| |||||||||||||| | ||||| || |||||||||||||||||||||||||||||| ||||||| |||||||    
T  19757779 tactatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcacctccaaggtaggactactt 19757698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 51448290 - 51448362
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  51448290 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 51448362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 52138529 - 52138457
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  52138529 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 52138457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 38849805 - 38849723
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||| |||| |||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||| |||||||| |||||||    
T  38849805 tactgtggacccaagatatttaaaccgtgtaaattgaggtatgatatgatctccaactttcacctccaaggtagacctacttc 38849723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 47542292 - 47542364
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||| ||||||||||||||||||||| |||||||| |||||||    
T  47542292 ccaagatatttaaaccgtgtaacttggggtatgaaatgatctccaactttcacctccaaggtagacctacttc 47542364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 25191090 - 25191016
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    |||||| || |||||||||||||| ||||||| || || ||||||||||||||||||||||||||| ||||||||    
T  25191090 tactatagacccaagatatttaaaccgtgtaacttgggctatgatatgatctccaactttcacctccaaggtaga 25191016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 27917283 - 27917205
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaacta 294  Q
    |||||||||  ||||||||||||| ||||||| || || ||||||||||||||||||||||||||  ||||||||||||    
T  27917283 tactatggactcaagatatttaaaccgtgtaacttgggatatgatatgatctccaactttcaccttcaaggtagaacta 27917205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 48221495 - 48221415
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactact 296  Q
    ||||||| ||||||||||||||||  |||||| ||  ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  48221495 tactatgaatccaagatatttaaaatgtgtaacttgtggtatgatatgatcttcaactttcacctctaagatagaactact 48221415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 369 - 447
Target Start/End: Complemental strand, 19757539 - 19757461
Alignment:
Q  369 ttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaagaagcata 447  Q
    ||||||| ||||||| || ||||||||||||||||||| | ||||| |||| |||||| |||||||||||| |||||||    
T  19757539 ttgtctccaagtctctaacctcccattcaattcctccctcaactctccaagcaggactgcatcatctgcaaaaagcata 19757461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 29817204 - 29817134
Alignment:
Q  228 aagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||| || ||||||| ||| ||||||||||||||||||||||||||||| ||| |||||| |||||    
T  29817204 aagatatttgaaccgtgtaacttatggtatgatatgatctccaactttcacctccaagatagaacaacttc 29817134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 26490024 - 26489964
Alignment:
Q  220 atggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacct 280  Q
    ||||| |||||||||||||||| ||||| || | |||||||||||||||| ||||||||||    
T  26490024 atggaaccaagatatttaaatcatgtaacttggagtatgatatgatctcccactttcacct 26489964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 43111606 - 43111669
Alignment:
Q  232 tatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||| |||||| |||   ||||||||||||||||||| ||||||| |||||| |||||||||    
T  43111606 tatttaaattgtgtaactta---tatgatatgatctccaactgtcacctctaaggtacaactacttc 43111669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 54425474 - 54425513
Alignment:
Q  213 ttttactatggatccaagatatttaaatcgtgtaatttag 252  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  54425474 ttttactatggatccaagatatttaaaccgtgtaacttag 54425513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 28245142 - 28245093
Alignment:
Q  222 ggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaa 271  Q
    |||||||||||||||||  ||||||| || |||||| |||||||||||||    
T  28245142 ggatccaagatatttaagccgtgtaacttggggtattatatgatctccaa 28245093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 30724374 - 30724435
Alignment:
Q  219 tatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacct 280  Q
    |||| ||||||||||| ||||  |||||| |||  ||||||||||||||||||| |||||||    
T  30724374 tatgtatccaagatatctaaactgtgtaacttatagtatgatatgatctccaacgttcacct 30724435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 44395141 - 44395080
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttca 277  Q
    ||||||||| || ||||||||||||||||||| ||  | | || ||||||||||||||||||    
T  44395141 tactatggacccgagatatttaaatcgtgtaacttgcgttgtggtatgatctccaactttca 44395080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 281
Target Start/End: Original strand, 1470705 - 1470733
Alignment:
Q  253 ggtatgatatgatctccaactttcacctc 281  Q
    |||||||||||||||||||||||||||||    
T  1470705 ggtatgatatgatctccaactttcacctc 1470733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 20318692 - 20318620
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  20318692 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagaactacttc 20318620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 3301560 - 3301486
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  3301560 tactatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtaga 3301486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 3394421 - 3394347
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  3394421 tactatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtaga 3394347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 16347973 - 16348055
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||  ||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  16347973 tactatggacacaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 16348055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 2076055 - 2076127
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  2076055 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagaactgcttc 2076127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 1274966 - 1274894
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||| ||| |||||||| |||||||    
T  1274966 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctccaaggtagacctacttc 1274894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 10638998 - 10638926
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||| ||||||||||||||| |||||||| |||||||    
T  10638998 ccaagatatttaaaccgtgtaacttggggtatgatatgatttccaactttcacctccaaggtagacctacttc 10638926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 12492968 - 12493040
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||| ||||| |||||||| |||||||    
T  12492968 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaacttttacctccaaggtagagctacttc 12493040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 24178225 - 24178153
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||||||||| || |||||||| |||||||    
T  24178225 ccaagatctttaaaccgtgtaacttagggtatgatatgatctccaactttcacttccaaggtagacctacttc 24178153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 28977438 - 28977510
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||| | || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  28977438 ccaagatatttaaaccgtgtgacttggggtatgatatgatctccaactttcacctctaaggtagacctacttc 28977510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 1288171 - 1288234
Alignment:
Q  227 caagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  1288171 caagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtaga 1288234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 17341772 - 17341848
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaac 292  Q
    ||||||||| |||| ||||||||| | ||||||||  |||||||||||||||||||||| |||||| ||||||||||    
T  17341772 tactatggacccaatatatttaaaccatgtaatttcaggtatgatatgatctccaacttccacctccaaggtagaac 17341848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 280
Target Start/End: Complemental strand, 25937781 - 25937719
Alignment:
Q  218 ctatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacct 280  Q
    ||||||| ||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||    
T  25937781 ctatggacccaagatatttaatttgtgtaatttggggaatgatatgatctccaactttcacct 25937719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 27302529 - 27302599
Alignment:
Q  227 caagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactactt 297  Q
    ||||||||||||| |||||| |||  ||||||||||||||||||||  ||||||  |||||||||||||||    
T  27302529 caagatatttaaaccgtgtagtttgaggtatgatatgatctccaacactcaccttcaaggtagaactactt 27302599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 43558397 - 43558450
Alignment:
Q  228 aagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctc 281  Q
    |||||||||||||||||||| ||  |||||| ||||||||||||||||||||||    
T  43558397 aagatatttaaatcgtgtaacttgtggtatgctatgatctccaactttcacctc 43558450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 37124243 - 37124168
Alignment:
Q  254 gtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttttg-tcatattatattccatatact 328  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||  ||||||| | | |||| ||||||||||||    
T  37124243 gtatgatttgatctccaactttcacctctaaggtagaaatacttcacatttttgctgaaattacattccatatact 37124168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 23979904 - 23979862
Alignment:
Q  255 tatgatatgatctccaactttcacctcaaaggtagaactactt 297  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    
T  23979904 tatgatatgatctccaactttcacctctaaggttgaactactt 23979862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 6368496 - 6368561
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctc 281  Q
    |||||| ||| |||||||||||||| |||||| ||  |||||| ||||||||||| ||||||||||    
T  6368496 tactatagatacaagatatttaaattgtgtaacttgtggtatgttatgatctccatctttcacctc 6368561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 27602 - 27558
Alignment:
Q  255 tatgatatgatctccaactttcacctcaaaggtagaactacttcg 299  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||    
T  27602 tatgatatgatctccaactttcacctccaaggcataactacttcg 27558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 43558543 - 43558599
Alignment:
Q  379 gtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatct 435  Q
    ||||||||  ||||||| |||||||||| | ||||| ||||||||||||||||||||    
T  43558543 gtctccaacatcccattaaattcctccctcaactctccaagaaggactacatcatct 43558599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Complemental strand, 35685400 - 35685345
Alignment:
Q  377 aagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatca 432  Q
    |||||||||| | ||||||||||||||||  |||||||||||| ||||||| ||||    
T  35685400 aagtctccaaccacccattcaattcctcctccgactcttcaagtaggactatatca 35685345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 36200493 - 36200411
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||| | |||| |||||||||  |||||| ||  |||||||||||| |||| ||||||||||| |  |||||||||||||    
T  36200493 tactatgaacccaaaatatttaaacggtgtaacttgaggtatgatatgacctcccactttcacctccatagtagaactacttc 36200411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 27477 - 27420
Alignment:
Q  377 aagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatc 434  Q
    ||||||||||  |||||||||||||||||| || |||| |||  ||||||||||||||    
T  27477 aagtctccaacttcccattcaattcctccctcgtctctccaaacaggactacatcatc 27420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 48623108 - 48623180
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| |||||||    
T  48623108 ccaagatatttaaatcgtgtaatttggggtatgatatgctctccaactttcacctccaaggtagacctacttc 48623180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 435930 - 435858
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  435930 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 435858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 23906882 - 23906954
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  23906882 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 23906954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 31960395 - 31960467
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  31960395 ccaagatatttaaaccgtgtaaattggggtatgatatgatctccaactttcacctccaaggtagacctacttc 31960467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 48174674 - 48174746
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  48174674 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 48174746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 33226910 - 33226839
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactactt 297  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| ||||||    
T  33226910 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctactt 33226839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 47265775 - 47265857
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||||||||||||||||||   ||||| || ||||||||||||| |||||||||||||||| |||||||| |||||||    
T  47265775 tactatggatccaagatatttaaactatgtaacttggggtatgatatgacctccaactttcacctccaaggtagacctacttc 47265857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 1777596 - 1777668
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||| ||||||||||||||| |||||||| |||||||    
T  1777596 ccaagatatttaaaacgtgtaacttggggtatgatatgatttccaactttcacctccaaggtagacctacttc 1777668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 56374991 - 56374919
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||| ||||||||||||||||| |||||||| |||||||    
T  56374991 ccaagatatttaaaccgtgtaacttggggtatgatatgctctccaactttcacctccaaggtagacctacttc 56374919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 53707495 - 53707423
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||| | ||||||| || |||||||||||||||| ||||||||||||| |||||||| |||||||    
T  53707495 ccaagatatttagaccgtgtaacttggggtatgatatgatcttcaactttcacctccaaggtagacctacttc 53707423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 27450745 - 27450816
Alignment:
Q  217 actatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggta 288  Q
    |||||||| ||||||||| ||||  |||||| || |||||||||||||||||||||||||||||| ||||||    
T  27450745 actatggacccaagatatgtaaactgtgtaacttggggtatgatatgatctccaactttcacctccaaggta 27450816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 16002639 - 16002566
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||| ||||||| |||||| |||||||||| |||||||||||||| ||||||||| ||||| ||||||||    
T  16002639 tactatggaaccaagat-tttaaaccgtgtaatttggggtatgatatgatttccaacttttacctccaaggtaga 16002566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 305
Target Start/End: Complemental strand, 41427539 - 41427461
Alignment:
Q  227 caagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttt 305  Q
    |||||||||||| |||||||| || |||||||||||||||| ||| |||||| |  |||||||||||||||||| ||||    
T  41427539 caagatatttaagtcgtgtaacttggggtatgatatgatcttcaattttcacttttaaggtagaactacttcgtttttt 41427461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 54787953 - 54788043
Alignment:
Q  350 aagtcatacacttttgaggtt-gtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaa 439  Q
    ||||||||||||| | ||||| ||||| ||||| | || || ||||| ||||  |||| ||| ||||||||||||||||||||||||||||    
T  54787953 aagtcatacacttctaaggtttgtctccaagtccctaaccttccattaaatttatccctcgagtcttcaagaaggactacatcatctgcaa 54788043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 439
Target Start/End: Original strand, 55769111 - 55769173
Alignment:
Q  377 aagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaa 439  Q
    |||||||||||||||||||||||||||| | ||| ||| |||  |||||||||| ||||||||    
T  55769111 aagtctccaatctcccattcaattcctctctcgaatctccaaacaggactacattatctgcaa 55769173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 7092798 - 7092847
Alignment:
Q  231 atatttaaatcgtgtaatttagggtatgatatgatctccaactttcacct 280  Q
    ||||||||| ||||||||||| | ||||||||||||| ||||||||||||    
T  7092798 atatttaaaccgtgtaatttaagatatgatatgatcttcaactttcacct 7092847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 447
Target Start/End: Original strand, 10776000 - 10776224
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttttgtcatattatattccatat 325  Q
    |||||||||||||| | ||||| ||  |||||||||||||||||||||||| |||| ||  |||||  | ||||  ||||  | | |||| |||||||||    
T  10776000 ccaagatatttaaaccatgtaacttgtggtatgatatgatctccaactttcccctctaaactagaaacatttcgccttttgctaaaattacattccatat 10776099  T
Q  326 actatctc--gctcatactcaagtagaagtcatacacttttgagg-ttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaag 422  Q
    | ||| ||  |||  | |||| |  |||| |||||| || | ||| ||||||| |||| ||| | |||||||| |||||||| | ||||||| || | ||    
T  10776100 agtatgtcgtgcttctgctcaggcggaagccatacatttctaaggcttgtctccaagtgtcctacctcccatttaattcctctctcgactctccatgtag 10776199  T
Q  423 gactacatcatctgcaagaagcata 447  Q
    ||||| ||||||||||| |||||||    
T  10776200 gactatatcatctgcaaaaagcata 10776224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 17667935 - 17667980
Alignment:
Q  254 gtatgatatgatctccaactttcacctcaaaggtagaactacttcg 299  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||    
T  17667935 gtatgatatgatatccaactttcacctctaaggtataactacttcg 17667980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 30807292 - 30807244
Alignment:
Q  233 atttaaatcgtgtaatttagggtatgatatgatctccaactttcacctc 281  Q
    ||||||| ||||||| ||  |||||||||||||||||||||||||||||    
T  30807292 atttaaaccgtgtaacttgtggtatgatatgatctccaactttcacctc 30807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 33369466 - 33369419
Alignment:
Q  228 aagatatttaaatcgtgtaatttagggtatgatatgatctccaacttt 275  Q
    |||||||||||||| ||||||||  |||||||||||||||| ||||||    
T  33369466 aagatatttaaatcatgtaatttgtggtatgatatgatctctaacttt 33369419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 447
Target Start/End: Original strand, 8918039 - 8918117
Alignment:
Q  369 ttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaagaagcata 447  Q
    ||||||| ||||||||||  |||||||||||| ||||  | ||||||| |  | ||||||||||||||||||| |||||    
T  8918039 ttgtctccaagtctccaacatcccattcaattgctccatcaactcttctattaagactacatcatctgcaagatgcata 8918117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 50286667 - 50286625
Alignment:
Q  231 atatttaaatcgtgtaatttagggtatgatatgatctccaact 273  Q
    ||||||||| ||||||| || ||||||||||||||||||||||    
T  50286667 atatttaaaccgtgtaacttggggtatgatatgatctccaact 50286625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 55768963 - 55769025
Alignment:
Q  231 atatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaact 293  Q
    ||||||||| ||||| | ||  ||||||| ||||||| ||||||||||||| |||||||||||    
T  55768963 atatttaaaccgtgttacttgtggtatgacatgatcttcaactttcacctctaaggtagaact 55769025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 55833219 - 55833281
Alignment:
Q  231 atatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaact 293  Q
    ||||||||| ||||| | ||  ||||||| ||||||| ||||||||||||| |||||||||||    
T  55833219 atatttaaaccgtgttacttgtggtatgacatgatcttcaactttcacctctaaggtagaact 55833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 439
Target Start/End: Original strand, 55833367 - 55833429
Alignment:
Q  377 aagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaa 439  Q
    |||||||||||||||||||||||||||| | ||| ||| |||  |||||||||| ||| ||||    
T  55833367 aagtctccaatctcccattcaattcctctctcgaatctccaaacaggactacattatccgcaa 55833429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 20917679 - 20917630
Alignment:
Q  230 gatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacc 279  Q
    ||||||||||  |||||| ||| ||||||||||||||| |||||||||||    
T  20917679 gatatttaaactgtgtaacttatggtatgatatgatcttcaactttcacc 20917630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 41427391 - 41427335
Alignment:
Q  383 ccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaa 439  Q
    |||| |||||||||||||||||||  |||||| |||| ||||| ||||||| |||||    
T  41427391 ccaaactcccattcaattcctcccttgactctccaagtaggacaacatcatatgcaa 41427335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 8671621 - 8671549
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  8671621 ccaagatatttaaaccgtgtaacttagggtatgatatgatctccaactttcacctccaaggtagacctacttc 8671549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 43240958 - 43241034
Alignment:
Q  222 ggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  43240958 ggatccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagatctacttc 43241034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 51601759 - 51601687
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  51601759 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 51601687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 32083316 - 32083390
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||| ||||||||||||||| ||| || || |||||||||||||||||||||||||||||| ||||||||    
T  32083316 tactatggacccaagatatttaaattgtgcaacttggggtatgatatgatctccaactttcacctccaaggtaga 32083390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 447
Target Start/End: Original strand, 37463436 - 37463667
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttttgtcatatta 315  Q
    |||||||||  |||||||||||||  |||||| |  | |||||||||||||||||||||||||||| ||||||||||| |  |   ||||  | |  |||    
T  37463436 tactatggactcaagatatttaaactgtgtaactcggagtatgatatgatctccaactttcacctccaaggtagaactccggc---ttttgctgaagtta 37463532  T
Q  316 tattccatatactatctc--gctcatactcaagtagaagtcatacacttttgagg-ttgtctcgaagtctccaatctcccattcaattcctcccacgact 412  Q
     |||||||||||| | ||  | |  |||  ||| ||||| ||||||||| | ||| ||||||| ||||||| || |||||||||| |||| ||| |||||    
T  37463533 cattccatatactctgtcttgtttctacaaaagcagaagccatacacttctaaggcttgtctcaaagtctctaacctcccattcatttccaccctcgact 37463632  T
Q  413 cttcaagaaggactacatcatctgcaagaagcata 447  Q
    ||||||| |||||||| |||||||||| |||||||    
T  37463633 cttcaagcaggactacgtcatctgcaaaaagcata 37463667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 1210446 - 1210374
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||||||||  |||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  1210446 ccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 1210374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 34827673 - 34827738
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctc 281  Q
    ||||||||| |||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||    
T  34827673 tactatggacccaagatatttaaaccttgtaacttagggtatgatatgatctcccactttcacctc 34827738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 49347974 - 49348047
Alignment:
Q  226 ccaagatatttaaatc-gtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| | |||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  49347974 ccaagatatttaaaccagtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 49348047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 7921638 - 7921574
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacct 280  Q
    ||||||||||||||||||| |||||||||||| ||  |||| |||||||||||||||||||||||    
T  7921638 tactatggatccaagatatataaatcgtgtaacttgtggtaagatatgatctccaactttcacct 7921574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 51441345 - 51441417
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||||||||  |||||| || |||||||||||||||||||||||||||||  |||||||| |||||||    
T  51441345 ccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcaccttcaaggtagacctacttc 51441417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 12807658 - 12807737
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactac 295  Q
    ||||||||||||||||||||||||| |||||| ||   |||||||| ||||  ||||||||||||| |||||||||||||    
T  12807658 tactatggatccaagatatttaaattgtgtaacttgtagtatgatacgatcctcaactttcacctctaaggtagaactac 12807737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 52641035 - 52641105
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcg 299  Q
    |||| |||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||| |||||||||||    
T  52641035 ccaatatatttaaattgtgtaactt---gtatgatatgatctccaactttcacctctaaggtcgaactacttcg 52641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 27445609 - 27445527
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||| |||| ||| ||||| ||||||| || |||||||||| ||||||||||||||||||  |||||| | |||||||    
T  27445609 tactatggacccaacataattaaaccgtgtaacttggggtatgataagatctccaactttcacctgcaaggtaaagctacttc 27445527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 439
Target Start/End: Complemental strand, 7814080 - 7813980
Alignment:
Q  339 tactcaagtagaagtcatacacttttgagg-ttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgc 437  Q
    ||||||||  |||| ||||||||| | ||| ||||||| ||||||| || ||||||||||||||||||| |||||||  ||| | |||||||||||||||    
T  7814080 tactcaagcggaagccatacacttataaggcttgtctccaagtctc-aacctcccattcaattcctccctcgactctcgaagcatgactacatcatctgc 7813982  T
Q  438 aa 439  Q
    ||    
T  7813981 aa 7813980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 32066877 - 32066921
Alignment:
Q  254 gtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||    
T  32066877 gtatgatatgatctccaattttcacctctaaggtagaactacttc 32066921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 46226887 - 46226963
Alignment:
Q  220 atggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactact 296  Q
    ||||| |||||||||||||| ||||||| | | |||||| ||||||||||||||| |||||| || |||| ||||||    
T  46226887 atggacccaagatatttaaaccgtgtaactcaaggtatggtatgatctccaacttgcacctccaaagtagtactact 46226963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 19936229 - 19936175
Alignment:
Q  219 tatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaact 273  Q
    |||||| |||||||||||||| | ||||| || ||||||||||||||||||||||    
T  19936229 tatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaact 19936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 431
Target Start/End: Original strand, 35829120 - 35829182
Alignment:
Q  369 ttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatc 431  Q
    ||||||| |||||||||| ||||||||||||||||| | ||||||| |||| ||||| |||||    
T  35829120 ttgtctcaaagtctccaacctcccattcaattcctctctcgactctccaagcaggacgacatc 35829182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 40419381 - 40419328
Alignment:
Q  227 caagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacct 280  Q
    |||||||||||||  |||||| ||  ||||||||||||||||||||||||||||    
T  40419381 caagatatttaaactgtgtaacttgtggtatgatatgatctccaactttcacct 40419328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 35828964 - 35829044
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactact 296  Q
    ||||||||| ||||||| |||||   | |||| ||  |||||||||||||||| | |||||||||| ||||||||||||||    
T  35828964 tactatggacccaagatgtttaagcagcgtaacttgtggtatgatatgatctctagctttcacctccaaggtagaactact 35829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 28528282 - 28528227
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctc 281  Q
    ||||||||||||||  |||||| ||  |||||| ||||||||||||||||||||||    
T  28528282 ccaagatatttaaactgtgtaacttgtggtatgctatgatctccaactttcacctc 28528227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 52420986 - 52420919
Alignment:
Q  369 ttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctg 436  Q
    ||||||| |||| ||||| || |||||||||||||||  ||||| |||||| |||||||||| |||||    
T  52420986 ttgtctctaagtttccaaccttccattcaattcctccatcgacttttcaagtaggactacattatctg 52420919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 16273415 - 16273471
Alignment:
Q  228 aagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggt 287  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||| ||| |||||    
T  16273415 aagatatttaaattgtgtaactt---gtatgatatgatctccaactttcatctctaaggt 16273471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 32405091 - 32405131
Alignment:
Q  252 gggtatgatatgatctccaactttcacctcaaaggtagaac 292  Q
    |||||||||||||||||||||||| ||||| ||| ||||||    
T  32405091 gggtatgatatgatctccaactttaacctctaagctagaac 32405131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 36565822 - 36565894
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  36565822 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 36565894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 12492423 - 12492494
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactactt 297  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| ||||||    
T  12492423 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctactt 12492494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 15215841 - 15215915
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||| |||| ||||||||| ||||||| || |||||||||||||||||||||||||||||| | ||||||    
T  15215841 tactatggacccaatatatttaaaccgtgtaactttgggtatgatatgatctccaactttcacctccatggtaga 15215915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 290
Target Start/End: Original strand, 42854579 - 42854649
Alignment:
Q  220 atggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||| |||||||||||||| ||||||| || ||||||||||||||||||| |||||||||| ||||||||    
T  42854579 atggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccacctttcacctccaaggtaga 42854649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 36544849 - 36544781
Alignment:
Q  230 gatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||| | ||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  36544849 gatatttaaaccttgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 36544781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 4033065 - 4033139
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||| | |||||||| ||||| ||||||| || |||||||||||||||||||||||||| ||| ||||||||    
T  4033065 tactatgaacccaagatacttaaaccgtgtaacttggggtatgatatgatctccaactttcatctccaaggtaga 4033139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 13984749 - 13984669
Alignment:
Q  213 ttttactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaact 293  Q
    |||||||||||| |||||||||||||| ||||||  || |||||||||||||||| |  |||||||||  |||||||||||    
T  13984749 ttttactatggacccaagatatttaaaccgtgtatcttggggtatgatatgatcttcttctttcaccttcaaggtagaact 13984669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 29735510 - 29735447
Alignment:
Q  234 tttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactactt 297  Q
    |||||||||| ||| || |||||||||||||||||| ||||||||||| | |||||||||||||    
T  29735510 tttaaatcgtataacttggggtatgatatgatctcccactttcacctccatggtagaactactt 29735447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 30578968 - 30579031
Alignment:
Q  382 tccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaagaagca 445  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||||| ||||| ||| |||||    
T  30578968 tccaacctccaattcaattcctccctcgactcttcaagaaggactacaccatcttcaaaaagca 30579031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 18849698 - 18849768
Alignment:
Q  228 aagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||| ||||||| || |||||||||||||||||||| ||| ||||| |||| | |||||||||    
T  18849698 aagatatttaaaccgtgtaacttggggtatgatatgatctccaatttttacctctaaggcataactacttc 18849768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 28300689 - 28300765
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttt 305  Q
    ||||||||||||||  |||||| ||   ||||||||||||||||| |||||||||| ||||| |||||||||||| ||||    
T  28300689 ccaagatatttaaactgtgtaactt---gtatgatatgatctccagctttcacctctaaggtcgaactacttcgtctttt 28300765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 19293988 - 19294078
Alignment:
Q  350 aagtcatacacttttgaggtt-gtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaa 439  Q
    ||||||||||||| | ||||| ||||| ||||| | || || ||||| ||||  |||| ||| ||||||||||||||||||||||||||||    
T  19293988 aagtcatacacttctaaggtttgtctccaagtccctaaccttccattaaatttatccctcgagtcttcaagaaggactacatcatctgcaa 19294078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 25985251 - 25985178
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaa 291  Q
    |||||| ||||||| ||||||||| ||||||| ||  ||||||||||||  ||||||||||||||| ||| |||||    
T  25985251 tactatagatccaatatatttaaaccgtgtaacttgtggtatgatatga--tccaactttcacctctaagctagaa 25985178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 439
Target Start/End: Original strand, 6511107 - 6511174
Alignment:
Q  372 tctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaa 439  Q
    |||| ||||||| | ||||||||||||||| |||  |||||||||||||  ||||||||||| |||||    
T  6511107 tctccaagtctctagtctcccattcaattcttccatcgactcttcaagatagactacatcatttgcaa 6511174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 8880015 - 8880069
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacct 280  Q
    |||||||||||||| ||||||| || || ||||||||||| | ||||||||||||    
T  8880015 ccaagatatttaaaccgtgtaacttgggatatgatatgattttcaactttcacct 8880069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 328
Target Start/End: Original strand, 41444885 - 41444987
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttttgtcatattatattccatat 325  Q
    |||||||||||||| |  |||| ||  |||||||||||||||||| |||||||||| ||| ||||| | |||||  ||||  | | |||| |||||||||    
T  41444885 ccaagatatttaaaccaagtaacttgtggtatgatatgatctccacctttcacctctaagttagaaatgcttcgccttttgctaaaattacattccatat 41444984  T
Q  326 act 328  Q
    |||    
T  41444985 act 41444987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 38667232 - 38667187
Alignment:
Q  254 gtatgatatgatctccaactttcacctcaaaggtagaactacttcg 299  Q
    |||||||||||||||||| ||||||||| | | |||||||||||||    
T  38667232 gtatgatatgatctccaagtttcacctctaggatagaactacttcg 38667187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 41445051 - 41445096
Alignment:
Q  390 cccattcaattcctcccacgactcttcaagaaggactacatcatct 435  Q
    |||||| |||||||||| ||||||| |||| |||||||||||||||    
T  41445051 cccatttaattcctccctcgactctccaagtaggactacatcatct 41445096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 281
Target Start/End: Complemental strand, 3285163 - 3285135
Alignment:
Q  253 ggtatgatatgatctccaactttcacctc 281  Q
    |||||||||||||||||||||||||||||    
T  3285163 ggtatgatatgatctccaactttcacctc 3285135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 13588997 - 13588917
Alignment:
Q  367 ggttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaagaagcata 447  Q
    ||||||||| |||| |  || ||||||||||||||||||  ||||||| |||| | ||||||||||||  ||| |||||||    
T  13588997 ggttgtctccaagtgtttaacctcccattcaattcctccatcgactctccaagcaagactacatcatcaccaaaaagcata 13588917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 37616617 - 37616545
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||| |||||||    
T  37616617 ccaagatatttaaatcgtgtaacttggggtatgatatgatctccacctttcacctccaaggtagacctacttc 37616545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 46356432 - 46356504
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  46356432 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 46356504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 32630315 - 32630244
Alignment:
Q  219 tatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    |||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  32630315 tatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtaga 32630244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 36869860 - 36869934
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||| | ||||||    
T  36869860 tactatggatccaagatatttaaaccgcgtaatttggggtatgatatgctctccaactttcacctccagggtaga 36869934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 33350390 - 33350459
Alignment:
Q  229 agatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  33350390 agatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 33350459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 31004924 - 31004853
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  31004924 ccaagatatttaaa-cgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 31004853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 36651695 - 36651623
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| || |||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  36651695 ccaagatatttaaaccgcgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 36651623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 49028968 - 49028896
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  49028968 ccaagatatttaaaccgtgtaacttggggtatgatctgatctccaactttcacctccaaggtagacctacttc 49028896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 38606716 - 38606649
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaa 283  Q
    ||||||||| |||||||||||||| ||||||| || || |||||||||||||||||||||||||||||    
T  38606716 tactatggacccaagatatttaaaccgtgtaacttgggatatgatatgatctccaactttcacctcaa 38606649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 11593661 - 11593589
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||| ||| || |||||||||||||||| ||||||||||||| |||||||| |||||||    
T  11593661 ccaagatatttaaaccgtctaacttggggtatgatatgatcttcaactttcacctccaaggtagacctacttc 11593589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 39906960 - 39907032
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| |||||||  | || ||||||||||||||||||||||||||| |||||||| |||||||    
T  39906960 ccaagatatttaaaccgtgtaacatgggatatgatatgatctccaactttcacctccaaggtagacctacttc 39907032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 48919099 - 48919017
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||||| ||||||| || |||| | ||||||||||| ||||| ||||  || ||||| |||||||    
T  48919099 tactatggatccaaaatatttaaaccgtgtaacttggggtgtaatatgatctcctacttttaccttcaatgtagacctacttc 48919017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 24177780 - 24177848
Alignment:
Q  230 gatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||| ||||||| || ||||||||||||||||||||| |||| ||  ||| |||| |||||||    
T  24177780 gatatttaaaccgtgtaaattggggtatgatatgatctccaaccttcatctacaagctagacctacttc 24177848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 447
Target Start/End: Original strand, 36870035 - 36870094
Alignment:
Q  388 ctcccattcaattcctcccacgactcttcaagaaggactacatcatctgcaagaagcata 447  Q
    ||||| ||||||||||||| ||||||  |||| | ||||||||||||||||| |||||||    
T  36870035 ctcccgttcaattcctccctcgactcaccaagcaagactacatcatctgcaaaaagcata 36870094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 43793611 - 43793676
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctc 281  Q
    |||||| || ||||||||||||||  |||||| |   |||||||||||||||| ||||||||||||    
T  43793611 tactatagacccaagatatttaaaatgtgtaactagtggtatgatatgatctctaactttcacctc 43793676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 21517895 - 21517959
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacct 280  Q
    ||||||| ||||||||||||||||  |||||| ||  ||||| || || ||||||||||||||||    
T  21517895 tactatgaatccaagatatttaaactgtgtaaattgaggtatcatgtggtctccaactttcacct 21517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 2610229 - 2610157
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  2610229 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 2610157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 38453201 - 38453265
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  38453201 ccaagatatttaaatcgtgtaacttggggtatgatatgatctccaactttcacctccaaggtaga 38453265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 45368198 - 45368268
Alignment:
Q  219 tatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  45368198 tatggacccaagatatttaaaccgtgtaattt-gggtatgatatgatctccaactttcacctccaaggtaga 45368268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 11992677 - 11992751
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    |||||| || |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  11992677 tactatagacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctctaaggtaga 11992751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 41763620 - 41763694
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||| ||||||||||||||||||| || || ||||||||||| |||||||||||||||||| ||||||||    
T  41763620 tactatggacccaagatatttaaatcgtgcaacttggggtatgatataatctccaactttcacctccaaggtaga 41763694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 4807293 - 4807221
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||||||||  |||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  4807293 ccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttc 4807221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 24584177 - 24584251
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||||||| |||||||||||||| ||||||| ||  ||| ||||||||||||||||||||||||| ||||||||    
T  24584177 tactatggacccaagatatttaaaccgtgtaacttgcggtctgatatgatctccaactttcacctccaaggtaga 24584251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 37281820 - 37281739
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactactt 297  Q
    ||||||||| | ||||||||||||  |||||| || |||||||| |||||||| |||||||||||| |||||||||||||||    
T  37281820 tactatggagctaagatatttaaaatgtgtaacttggggtatgacatgatctcaaactttcacctccaaggtagaactactt 37281739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 8180481 - 8180409
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||| ||||||||| ||||||| || | |||||||||||||||||||||||||||| |||||||| |||||||    
T  8180481 ccaaaatatttaaaccgtgtaacttggagtatgatatgatctccaactttcacctccaaggtagacctacttc 8180409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 13149024 - 13148953
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggt 287  Q
    ||||||||| |  ||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||    
T  13149024 tactatggacctgagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggt 13148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 36038924 - 36038848
Alignment:
Q  223 gatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttcg 299  Q
    ||||||||||||||||||  ||||| || |||||||||||||||| |||||||||  |  |||||||||||||||||    
T  36038924 gatccaagatatttaaatgatgtaaattggggtatgatatgatcttcaactttcagttataaggtagaactacttcg 36038848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 23866351 - 23866285
Alignment:
Q  231 atatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactactt 297  Q
    |||||||||| |||||||||  |||||||||||||||| ||||||||| || ||| |||||||||||    
T  23866351 atatttaaattgtgtaatttgtggtatgatatgatctctaactttcacatctaagttagaactactt 23866285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 30743322 - 30743260
Alignment:
Q  228 aagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    |||||||||||| ||||||| || || |||| |||||||||||||||||||||| ||||||||    
T  30743322 aagatatttaaaccgtgtaacttgggatatggtatgatctccaactttcacctccaaggtaga 30743260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 35284816 - 35284877
Alignment:
Q  369 ttgtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacat 430  Q
    ||||||||||| |||||| ||||||||||||||||||  | |||||||||| ||||||||||    
T  35284816 ttgtctcgaagcctccaaactcccattcaattcctccaccaactcttcaagcaggactacat 35284877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 12475031 - 12475074
Alignment:
Q  255 tatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  12475031 tatgatatgatctccaactttcacctctaaggtagacctacttc 12475074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 452203 - 452249
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaac 272  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||    
T  452203 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaac 452249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 281
Target Start/End: Complemental strand, 876842 - 876778
Alignment:
Q  217 actatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctc 281  Q
    ||||| ||||||| |||||||||  |||||| ||  |||| ||||||||||||||||||||||||    
T  876842 actatagatccaacatatttaaactgtgtaacttgtggtaggatatgatctccaactttcacctc 876778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 17581145 - 17581094
Alignment:
Q  254 gtatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttt 305  Q
    ||||||||||||||| ||||||||| || ||||| ||||||||||| |||||    
T  17581145 gtatgatatgatctctaactttcacttctaaggtcgaactacttcgcatttt 17581094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 13592958 - 13593008
Alignment:
Q  255 tatgatatgatctccaactttcacctcaaaggtagaactacttcgtatttt 305  Q
    ||||||||||||| ||||||||||||| ||| | |||||||||||| ||||    
T  13592958 tatgatatgatcttcaactttcacctctaagtttgaactacttcgtctttt 13593008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 14769989 - 14769943
Alignment:
Q  228 aagatatttaaatcgtgtaatttagggtatgatatgatctccaactt 274  Q
    |||||||||||| ||||||| ||| | ||||||||||||||||||||    
T  14769989 aagatatttaaaccgtgtaacttatgctatgatatgatctccaactt 14769943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 3244259 - 3244299
Alignment:
Q  258 gatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||| ||||||||||||| |||||||| |||||||    
T  3244259 gatatgatcttcaactttcacctccaaggtagacctacttc 3244299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 3865773 - 3865709
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    ||||| |||| ||| ||||||| || || ||  ||||||||||||||||||||||| ||||||||    
T  3865773 ccaagttattgaaaccgtgtaacttgggatacaatatgatctccaactttcacctccaaggtaga 3865709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 12169 - 12251
Alignment:
Q  216 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||||| |||||||||||||| | ||||| || |||||||||||||||||||||||||||| | |||||||| |||||||    
T  12169 tactatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcaccgcgaaggtagacctacttc 12251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 5898 - 5821
Alignment:
Q  221 tggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||| |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||| || |||||||||    
T  5898 tggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaagatataactacttc 5821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 82435 - 82350
Alignment:
Q  213 ttttactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    |||||||||||| |||||||||||||| ||||||| ||  |||||||||| ||||||||||||| |||| |||| ||| |||||||    
T  82435 ttttactatggacccaagatatttaaaccgtgtaacttgtggtatgatataatctccaactttcgcctccaaggcagacctacttc 82350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 2851 - 2915
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 290  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||| || |||||    
T  2851 ccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaatgtaga 2915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 31169 - 31097
Alignment:
Q  226 ccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 298  Q
    ||||||| |||||| ||||||| || ||||||||||||||||||||||||||| || |||||||| |||||||    
T  31169 ccaagatgtttaaaccgtgtaacttggggtatgatatgatctccaactttcacttccaaggtagacctacttc 31097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 48639 - 48704
Alignment:
Q  371 gtctcgaagtctccaatctcccattcaattcctcccacgactcttcaagaaggactacatcatctg 436  Q
    ||||| ||||||| || ||||||||||||||||||| ||||||| |||| |  |||||||||||||    
T  48639 gtctccaagtctctaacctcccattcaattcctccctcgactctccaagcaaaactacatcatctg 48704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 9356 - 9303
Alignment:
Q  228 aagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctc 281  Q
    |||||||||||||||||||| | |   ||||||||||||||||||||| |||||    
T  9356 aagatatttaaatcgtgtaactaataatatgatatgatctccaacttttacctc 9303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 110116 - 110173
Alignment:
Q  223 gatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacct 280  Q
    |||||||| |||||||| ||| ||||||| | ||||||| || |||||||||||||||    
T  110116 gatccaagttatttaaaacgtataatttatgatatgataagaactccaactttcacct 110173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University