View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7906_high_16 (Length: 301)
Name: NF7906_high_16
Description: NF7906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7906_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 19 - 285
Target Start/End: Original strand, 9896568 - 9896831
Alignment:
| Q |
19 |
tccataatgctttcttttgagaaagagttctcaagagacaagtcc---ctaataatttggtttattcaaggtgtgatagaaatacaacaatattctttta |
115 |
Q |
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| T |
9896568 |
tccataatgctttcttttgagaaagagttctcaagagacaagtcctccctaataatttggtttattcaaggtgtgatagaaatacaacaatattctttt- |
9896666 |
T |
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| Q |
116 |
taaagttgccaaaatacgttacacagcttccaagcagatttcagttcttaaatctga---tgatattttttagagtcaaatttatttattgaagctcgtg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
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| T |
9896667 |
-------gccaaaatacgttacacagcttccaagcagatttcagttcttaaatctgaagatgatattttttagagtcaaatttatt-attgaagctcgtg |
9896758 |
T |
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| Q |
213 |
ttctacaattcttaaagggttcttgttgatcagcttgccttaattgttccaaaaatgattagagggttagtta |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9896759 |
ttctacaattcttaaagggttcttgttgatcagcttgccttaattgttccaaaaatgattagagggttagtta |
9896831 |
T |
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