View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7907_low_4 (Length: 311)
Name: NF7907_low_4
Description: NF7907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7907_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 49299264 - 49298981
Alignment:
| Q |
14 |
atatacccaaccgtcaaactaaatacttgtaatattttaataaagttcatagatcacaccgttaactaaggattgaaagtaacatgaaagatgattgtat |
113 |
Q |
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| T |
49299264 |
atatacccaaccgtcaaactaaatacttgtaatattttaataaagttcatagatcacaccgttaactaaggattgaaagtaacatgaaagatgattgtat |
49299165 |
T |
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| Q |
114 |
gtattccccttcagaatcaaaacacataatatttattctaaagtagggatatttgtgaagattgaattggtatatatcatttgaacttcgatccaatata |
213 |
Q |
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| T |
49299164 |
gtattccccttcagaatcaaaacaca--atatttattctaaagtagggatatttgtgaagattgaattggtatatatcatttgaacttcgatccaatata |
49299067 |
T |
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| Q |
214 |
tttgacttagttctttggttgtacagtcagtttgattttaagtcaaatcctttccaatgtaatcaaatttatattggtttggattg |
299 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49299066 |
tttgacttagttctttggttgtacagtcagttcgattttaagtcaaatcctttccaatgtaatcaaatttatattggtttggattg |
49298981 |
T |
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