View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7908_high_2 (Length: 373)

Name: NF7908_high_2
Description: NF7908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7908_high_2
NF7908_high_2
[»] chr4 (58 HSPs)
chr4 (9-360)||(5372874-5373226)
chr4 (9-293)||(12136116-12136393)
chr4 (201-360)||(15116051-15116209)
chr4 (21-157)||(12732271-12732409)
chr4 (165-360)||(54365835-54366025)
chr4 (213-360)||(15215994-15216141)
chr4 (9-152)||(19082906-19083049)
chr4 (99-323)||(41919034-41919253)
chr4 (213-359)||(9650118-9650265)
chr4 (112-224)||(13595908-13596021)
chr4 (201-287)||(14569666-14569751)
chr4 (201-257)||(55378769-55378825)
chr4 (201-283)||(43283273-43283354)
chr4 (201-257)||(8372546-8372602)
chr4 (201-257)||(15274668-15274724)
chr4 (201-257)||(18246117-18246173)
chr4 (201-257)||(26678118-26678174)
chr4 (201-257)||(10642313-10642369)
chr4 (201-257)||(18166813-18166869)
chr4 (201-257)||(19699611-19699667)
chr4 (201-257)||(19710196-19710252)
chr4 (201-257)||(19998456-19998512)
chr4 (201-257)||(34393324-34393380)
chr4 (165-286)||(50223991-50224105)
chr4 (99-278)||(19557499-19557671)
chr4 (201-253)||(7134513-7134565)
chr4 (201-257)||(9293651-9293707)
chr4 (201-257)||(15211454-15211510)
chr4 (201-257)||(17150253-17150309)
chr4 (200-278)||(38763040-38763112)
chr4 (9-62)||(19624090-19624142)
chr4 (99-284)||(10239268-10239446)
chr4 (11-62)||(14569472-14569522)
chr4 (246-284)||(24237195-24237233)
chr4 (165-286)||(47470166-47470282)
chr4 (201-257)||(16520740-16520796)
chr4 (165-276)||(17378031-17378136)
chr4 (201-257)||(22356621-22356677)
chr4 (201-233)||(37958921-37958953)
chr4 (200-278)||(5407412-5407484)
chr4 (9-40)||(15216320-15216351)
chr4 (244-287)||(42707007-42707050)
chr4 (99-152)||(15216191-15216245)
chr4 (244-286)||(19623872-19623914)
chr4 (99-157)||(24237077-24237137)
chr4 (319-360)||(41918935-41918976)
chr4 (201-233)||(7187805-7187837)
chr4 (201-233)||(7966474-7966506)
chr4 (137-233)||(13448913-13449007)
chr4 (244-284)||(17213700-17213740)
chr4 (201-233)||(18496357-18496389)
chr4 (201-233)||(20813913-20813945)
chr4 (201-233)||(21961463-21961495)
chr4 (201-233)||(30236434-30236466)
chr4 (201-233)||(34198048-34198080)
chr4 (201-233)||(41167792-41167824)
chr4 (250-286)||(41258177-41258213)
chr4 (201-233)||(44054113-44054145)
[»] chr5 (51 HSPs)
chr5 (9-360)||(20456319-20456672)
chr5 (9-360)||(14345412-14345779)
chr5 (124-360)||(11963789-11964025)
chr5 (13-316)||(16837553-16837840)
chr5 (201-360)||(5453053-5453212)
chr5 (9-157)||(23412050-23412199)
chr5 (201-357)||(24227689-24227848)
chr5 (99-287)||(19872082-19872264)
chr5 (202-323)||(3671689-3671810)
chr5 (124-278)||(3420666-3420812)
chr5 (127-276)||(24082309-24082450)
chr5 (201-257)||(10246-10302)
chr5 (201-257)||(111178-111234)
chr5 (201-257)||(1221831-1221887)
chr5 (201-257)||(9732787-9732843)
chr5 (201-257)||(10780310-10780366)
chr5 (201-257)||(11340538-11340594)
chr5 (201-257)||(18780240-18780296)
chr5 (201-257)||(25211987-25212043)
chr5 (201-257)||(25276139-25276195)
chr5 (201-257)||(34937510-34937566)
chr5 (99-280)||(23236240-23236414)
chr5 (201-283)||(23492175-23492256)
chr5 (201-278)||(17907754-17907830)
chr5 (201-257)||(17473897-17473953)
chr5 (201-257)||(22885239-22885295)
chr5 (201-257)||(25944755-25944811)
chr5 (201-253)||(28888154-28888206)
chr5 (201-257)||(35793350-35793406)
chr5 (305-360)||(11765500-11765555)
chr5 (129-278)||(26561621-26561762)
chr5 (201-257)||(11579861-11579917)
chr5 (201-257)||(29192862-29192918)
chr5 (246-286)||(23412254-23412294)
chr5 (130-233)||(33628143-33628246)
chr5 (127-233)||(6454900-6455004)
chr5 (16-62)||(37985911-37985957)
chr5 (9-50)||(5623486-5623527)
chr5 (201-257)||(43445906-43445962)
chr5 (201-252)||(431044-431095)
chr5 (201-283)||(37189945-37190021)
chr5 (319-360)||(3671836-3671877)
chr5 (99-152)||(11765666-11765719)
chr5 (9-62)||(11765769-11765821)
chr5 (201-257)||(19497875-19497931)
chr5 (201-233)||(20710717-20710749)
chr5 (201-233)||(21392377-21392409)
chr5 (201-233)||(21661615-21661647)
chr5 (201-233)||(23453129-23453161)
chr5 (201-233)||(23460373-23460405)
chr5 (201-233)||(23464634-23464666)
[»] chr8 (60 HSPs)
chr8 (9-360)||(22319700-22320040)
chr8 (9-319)||(22311120-22311433)
chr8 (99-360)||(19333780-19334042)
chr8 (99-360)||(45561445-45561710)
chr8 (99-360)||(17264666-17264928)
chr8 (9-357)||(11600137-11600470)
chr8 (113-360)||(25608087-25608329)
chr8 (165-360)||(23216880-23217074)
chr8 (201-360)||(25293794-25293952)
chr8 (201-360)||(25755783-25755941)
chr8 (9-140)||(16000244-16000374)
chr8 (9-140)||(22883851-22883982)
chr8 (201-360)||(23879217-23879376)
chr8 (25-140)||(11542086-11542199)
chr8 (248-360)||(24237327-24237440)
chr8 (99-278)||(22499136-22499309)
chr8 (200-321)||(18120207-18120328)
chr8 (99-278)||(24554408-24554580)
chr8 (248-360)||(23350457-23350574)
chr8 (201-257)||(645975-646031)
chr8 (99-233)||(20707956-20708089)
chr8 (201-257)||(23509007-23509063)
chr8 (124-276)||(24906121-24906268)
chr8 (201-257)||(831710-831766)
chr8 (99-286)||(33170419-33170600)
chr8 (201-257)||(3433723-3433779)
chr8 (201-257)||(17343419-17343475)
chr8 (201-257)||(18610367-18610423)
chr8 (201-257)||(24108662-24108718)
chr8 (201-257)||(24931013-24931069)
chr8 (201-257)||(28835919-28835975)
chr8 (201-257)||(41509127-41509183)
chr8 (201-252)||(269890-269941)
chr8 (203-256)||(22008553-22008606)
chr8 (201-257)||(24719518-24719575)
chr8 (201-257)||(6776427-6776483)
chr8 (201-257)||(13664748-13664804)
chr8 (201-257)||(13724023-13724079)
chr8 (201-257)||(16043250-16043306)
chr8 (201-257)||(22909540-22909596)
chr8 (201-257)||(16041574-16041630)
chr8 (199-277)||(17500109-17500181)
chr8 (199-280)||(18263246-18263321)
chr8 (244-286)||(22884069-22884111)
chr8 (165-286)||(23118675-23118789)
chr8 (319-360)||(11542327-11542368)
chr8 (9-46)||(17264560-17264597)
chr8 (200-233)||(38531826-38531859)
chr8 (201-257)||(23631178-23631234)
chr8 (9-40)||(45561785-45561816)
chr8 (244-286)||(15931626-15931668)
chr8 (98-171)||(23350327-23350401)
chr8 (9-50)||(17499921-17499962)
chr8 (200-233)||(21200031-21200064)
chr8 (201-230)||(23835490-23835519)
chr8 (173-233)||(11542213-11542273)
chr8 (201-233)||(20655966-20655998)
chr8 (201-233)||(21679379-21679411)
chr8 (280-327)||(23539254-23539302)
chr8 (201-233)||(25120690-25120722)
[»] scaffold0017 (1 HSPs)
scaffold0017 (9-322)||(10349-10650)
[»] chr3 (72 HSPs)
chr3 (9-360)||(8602369-8602700)
chr3 (80-360)||(15551649-15551920)
chr3 (165-360)||(17760557-17760752)
chr3 (165-360)||(19061877-19062072)
chr3 (9-360)||(37918661-37918990)
chr3 (9-287)||(10902543-10902805)
chr3 (125-348)||(15988721-15988938)
chr3 (248-360)||(31414399-31414511)
chr3 (201-360)||(6817387-6817546)
chr3 (201-360)||(38813159-38813318)
chr3 (33-360)||(38378035-38378342)
chr3 (205-356)||(12950836-12950987)
chr3 (9-333)||(40041355-40041666)
chr3 (95-360)||(14182155-14182416)
chr3 (250-360)||(25106101-25106211)
chr3 (99-319)||(5230400-5230616)
chr3 (244-360)||(17391285-17391402)
chr3 (201-327)||(20419021-20419145)
chr3 (99-280)||(43429368-43429543)
chr3 (9-79)||(8687932-8688002)
chr3 (9-79)||(9039801-9039871)
chr3 (201-283)||(17936394-17936475)
chr3 (127-278)||(6230494-6230637)
chr3 (202-257)||(7851623-7851678)
chr3 (99-278)||(17320410-17320583)
chr3 (201-257)||(12796662-12796718)
chr3 (127-278)||(14819681-14819824)
chr3 (201-257)||(16818982-16819038)
chr3 (201-257)||(18908618-18908674)
chr3 (201-257)||(22272973-22273029)
chr3 (201-283)||(12490652-12490733)
chr3 (203-257)||(51160340-51160394)
chr3 (201-257)||(19944744-19944800)
chr3 (199-286)||(41659870-41659951)
chr3 (201-252)||(48419905-48419956)
chr3 (203-257)||(30140925-30140979)
chr3 (9-62)||(293964-294017)
chr3 (201-257)||(11812740-11812796)
chr3 (201-252)||(9304888-9304939)
chr3 (213-283)||(11381033-11381102)
chr3 (9-152)||(20418832-20418978)
chr3 (201-257)||(33339977-33340033)
chr3 (201-253)||(38166151-38166203)
chr3 (127-233)||(4147567-4147671)
chr3 (127-233)||(4164119-4164223)
chr3 (315-360)||(5230343-5230388)
chr3 (9-46)||(6817706-6817743)
chr3 (9-50)||(21168773-21168814)
chr3 (9-50)||(22637393-22637434)
chr3 (9-50)||(41659679-41659720)
chr3 (201-257)||(54045708-54045765)
chr3 (244-284)||(14968127-14968167)
chr3 (201-233)||(40937888-40937920)
chr3 (201-232)||(23490714-23490745)
chr3 (9-55)||(5230677-5230722)
chr3 (244-278)||(11636812-11636846)
chr3 (250-283)||(11517291-11517324)
chr3 (9-38)||(12950634-12950663)
chr3 (9-46)||(15551969-15552006)
chr3 (201-233)||(6148746-6148778)
chr3 (201-233)||(11330863-11330895)
chr3 (201-233)||(11884106-11884138)
chr3 (201-233)||(12563420-12563452)
chr3 (201-233)||(14296675-14296707)
chr3 (201-233)||(14302302-14302334)
chr3 (201-233)||(15548773-15548805)
chr3 (201-233)||(17098858-17098890)
chr3 (201-233)||(25769479-25769511)
chr3 (201-233)||(35121866-35121898)
chr3 (201-233)||(39654108-39654140)
chr3 (201-233)||(47786758-47786790)
chr3 (201-233)||(53900485-53900517)
[»] chr1 (33 HSPs)
chr1 (9-360)||(20191813-20192148)
chr1 (9-348)||(78277-78601)
chr1 (9-287)||(25092923-25093186)
chr1 (9-360)||(20820501-20820842)
chr1 (244-360)||(33395168-33395285)
chr1 (99-227)||(33384091-33384220)
chr1 (99-278)||(40438121-40438295)
chr1 (127-278)||(52397854-52397997)
chr1 (201-257)||(20252281-20252337)
chr1 (201-257)||(22080129-22080185)
chr1 (201-257)||(22352224-22352280)
chr1 (201-248)||(41217482-41217529)
chr1 (199-287)||(40555631-40555713)
chr1 (201-257)||(22364882-22364938)
chr1 (9-50)||(5472461-5472502)
chr1 (9-50)||(21041856-21041897)
chr1 (201-258)||(24498444-24498501)
chr1 (199-286)||(41213496-41213576)
chr1 (201-286)||(21193427-21193505)
chr1 (244-278)||(46144067-46144101)
chr1 (199-287)||(5472220-5472301)
chr1 (201-257)||(15863513-15863569)
chr1 (9-72)||(41213705-41213769)
chr1 (165-277)||(5770042-5770145)
chr1 (13-50)||(5770265-5770302)
chr1 (279-359)||(15806999-15807080)
chr1 (200-233)||(18164438-18164471)
chr1 (201-233)||(9786337-9786369)
chr1 (173-233)||(21042023-21042082)
chr1 (201-233)||(22148264-22148296)
chr1 (201-233)||(35053086-35053118)
chr1 (201-233)||(36358197-36358229)
chr1 (201-233)||(51658279-51658311)
[»] scaffold0216 (1 HSPs)
scaffold0216 (9-354)||(22897-23218)
[»] chr2 (39 HSPs)
chr2 (9-360)||(18533422-18533757)
chr2 (9-287)||(25593236-25593498)
chr2 (95-360)||(29111926-29112186)
chr2 (115-360)||(43640530-43640773)
chr2 (201-360)||(19435684-19435843)
chr2 (165-360)||(6092676-6092864)
chr2 (201-360)||(19657724-19657882)
chr2 (201-327)||(45620229-45620354)
chr2 (244-360)||(20271209-20271326)
chr2 (201-257)||(3801311-3801367)
chr2 (201-257)||(12638192-12638248)
chr2 (201-257)||(19888925-19888981)
chr2 (201-257)||(42180407-42180463)
chr2 (251-360)||(23614339-23614446)
chr2 (201-257)||(21140078-21140134)
chr2 (124-286)||(24272241-24272395)
chr2 (115-256)||(24089281-24089420)
chr2 (248-357)||(24839670-24839779)
chr2 (201-257)||(21276540-21276596)
chr2 (201-257)||(24966364-24966420)
chr2 (201-257)||(34822254-34822310)
chr2 (201-257)||(38706998-38707054)
chr2 (201-246)||(7509865-7509910)
chr2 (9-75)||(19643951-19644015)
chr2 (244-345)||(23170097-23170199)
chr2 (244-345)||(23581354-23581456)
chr2 (9-50)||(24272112-24272153)
chr2 (201-233)||(7319663-7319695)
chr2 (201-278)||(24868806-24868877)
chr2 (201-231)||(25600119-25600149)
chr2 (201-233)||(269374-269406)
chr2 (201-233)||(4450194-4450226)
chr2 (201-233)||(22137694-22137726)
chr2 (201-233)||(22581881-22581913)
chr2 (165-233)||(23614457-23614525)
chr2 (201-233)||(24296442-24296474)
chr2 (201-233)||(28972217-28972249)
chr2 (201-233)||(32738731-32738763)
chr2 (201-233)||(36892651-36892683)
[»] scaffold0115 (1 HSPs)
scaffold0115 (9-360)||(19404-19739)
[»] chr7 (55 HSPs)
chr7 (25-360)||(28718124-28718448)
chr7 (99-360)||(4482436-4482690)
chr7 (167-360)||(14278648-14278841)
chr7 (127-360)||(21677269-21677500)
chr7 (13-140)||(18081277-18081405)
chr7 (9-360)||(39293898-39294262)
chr7 (201-360)||(4072746-4072904)
chr7 (200-360)||(12245941-12246101)
chr7 (208-356)||(14302613-14302762)
chr7 (16-284)||(15980350-15980617)
chr7 (9-76)||(17923050-17923117)
chr7 (112-224)||(9641224-9641337)
chr7 (95-287)||(13460489-13460677)
chr7 (203-283)||(7286502-7286581)
chr7 (201-257)||(7290847-7290903)
chr7 (201-257)||(14253268-14253324)
chr7 (201-257)||(16416448-16416504)
chr7 (201-252)||(369083-369134)
chr7 (9-76)||(17926887-17926954)
chr7 (165-286)||(9322893-9323007)
chr7 (201-257)||(11285287-11285343)
chr7 (201-257)||(16481034-16481090)
chr7 (244-327)||(19065539-19065623)
chr7 (201-252)||(2192808-2192859)
chr7 (201-248)||(12545815-12545862)
chr7 (9-120)||(12245755-12245866)
chr7 (201-283)||(13868060-13868141)
chr7 (201-278)||(15305693-15305768)
chr7 (9-62)||(16370399-16370452)
chr7 (201-257)||(18305836-18305892)
chr7 (201-286)||(5617721-5617800)
chr7 (201-254)||(3048007-3048060)
chr7 (250-286)||(3193868-3193904)
chr7 (9-57)||(4073050-4073098)
chr7 (305-356)||(3135512-3135563)
chr7 (19-120)||(14302845-14302942)
chr7 (201-286)||(16915915-16915994)
chr7 (202-327)||(16206293-16206420)
chr7 (165-233)||(18920976-18921042)
chr7 (165-287)||(13452419-13452535)
chr7 (115-233)||(14938890-14939007)
chr7 (115-233)||(15366483-15366600)
chr7 (115-233)||(9058497-9058613)
chr7 (306-344)||(15980299-15980337)
chr7 (9-72)||(17948072-17948136)
chr7 (199-233)||(31499504-31499538)
chr7 (201-286)||(13388251-13388331)
chr7 (200-233)||(15628948-15628981)
chr7 (201-233)||(141815-141847)
chr7 (201-252)||(2024634-2024683)
chr7 (202-230)||(4437141-4437169)
chr7 (201-233)||(13375949-13375981)
chr7 (201-233)||(15914294-15914326)
chr7 (201-233)||(45455604-45455636)
chr7 (201-233)||(49049746-49049778)
[»] scaffold0009 (4 HSPs)
scaffold0009 (9-140)||(98920-99050)
scaffold0009 (244-360)||(256550-256667)
scaffold0009 (201-257)||(270268-270324)
scaffold0009 (244-280)||(98797-98833)
[»] scaffold0725 (1 HSPs)
scaffold0725 (9-178)||(7150-7320)
[»] scaffold0601 (2 HSPs)
scaffold0601 (9-140)||(3353-3484)
scaffold0601 (261-349)||(3215-3304)
[»] chr6 (40 HSPs)
chr6 (99-359)||(29162665-29162919)
chr6 (125-356)||(21929634-21929859)
chr6 (99-357)||(16131426-16131681)
chr6 (253-360)||(23219619-23219728)
chr6 (95-284)||(17375555-17375739)
chr6 (99-277)||(22595494-22595666)
chr6 (99-276)||(34965100-34965273)
chr6 (124-275)||(22467942-22468086)
chr6 (202-360)||(31163070-31163228)
chr6 (201-257)||(4988927-4988983)
chr6 (201-257)||(16235707-16235763)
chr6 (201-257)||(19627437-19627493)
chr6 (201-257)||(23975647-23975703)
chr6 (201-257)||(33316611-33316667)
chr6 (201-257)||(35017650-35017706)
chr6 (124-286)||(19852456-19852610)
chr6 (201-287)||(4174546-4174627)
chr6 (201-287)||(4230175-4230256)
chr6 (201-257)||(14628566-14628622)
chr6 (201-257)||(18005055-18005111)
chr6 (201-257)||(18578773-18578829)
chr6 (201-257)||(18835549-18835605)
chr6 (201-257)||(18843905-18843961)
chr6 (205-252)||(18397107-18397154)
chr6 (203-327)||(16374242-16374364)
chr6 (201-257)||(16828008-16828064)
chr6 (201-257)||(35011321-35011377)
chr6 (244-287)||(17858215-17858258)
chr6 (19-120)||(16374062-16374163)
chr6 (201-286)||(22846386-22846465)
chr6 (201-278)||(33540069-33540140)
chr6 (9-50)||(19852329-19852370)
chr6 (9-50)||(22595729-22595770)
chr6 (99-157)||(15006587-15006646)
chr6 (16-55)||(16131326-16131365)
chr6 (128-278)||(31469375-31469517)
chr6 (201-233)||(941001-941033)
chr6 (201-233)||(21621371-21621403)
chr6 (201-233)||(25917926-25917958)
chr6 (201-233)||(32896227-32896259)
[»] scaffold0088 (2 HSPs)
scaffold0088 (11-140)||(45558-45688)
scaffold0088 (252-284)||(45432-45464)
[»] scaffold0047 (2 HSPs)
scaffold0047 (9-157)||(73245-73393)
scaffold0047 (244-287)||(1947-1990)
[»] scaffold0561 (1 HSPs)
scaffold0561 (13-140)||(4720-4847)
[»] scaffold0090 (2 HSPs)
scaffold0090 (201-360)||(6886-7048)
scaffold0090 (246-360)||(36944-37058)
[»] scaffold0231 (1 HSPs)
scaffold0231 (202-360)||(15096-15254)
[»] scaffold0331 (2 HSPs)
scaffold0331 (10-152)||(11418-11560)
scaffold0331 (176-323)||(11561-11702)
[»] scaffold0468 (1 HSPs)
scaffold0468 (173-356)||(13145-13323)
[»] scaffold0073 (3 HSPs)
scaffold0073 (9-131)||(49557-49680)
scaffold0073 (9-131)||(54088-54211)
scaffold0073 (171-286)||(55672-55781)
[»] scaffold1923 (1 HSPs)
scaffold1923 (203-357)||(646-801)
[»] scaffold0808 (1 HSPs)
scaffold0808 (201-327)||(5595-5721)
[»] scaffold0174 (1 HSPs)
scaffold0174 (244-360)||(22329-22449)
[»] scaffold0385 (1 HSPs)
scaffold0385 (9-85)||(12497-12573)
[»] scaffold0191 (1 HSPs)
scaffold0191 (201-257)||(688-744)
[»] scaffold0205 (2 HSPs)
scaffold0205 (16-152)||(4544-4679)
scaffold0205 (245-287)||(4761-4803)
[»] scaffold0005 (2 HSPs)
scaffold0005 (201-287)||(247625-247710)
scaffold0005 (11-62)||(247854-247904)
[»] scaffold0004 (3 HSPs)
scaffold0004 (99-286)||(25721-25901)
scaffold0004 (201-257)||(331026-331082)
scaffold0004 (99-286)||(84588-84757)
[»] scaffold0622 (1 HSPs)
scaffold0622 (201-257)||(7384-7440)
[»] scaffold0028 (2 HSPs)
scaffold0028 (201-257)||(91023-91079)
scaffold0028 (244-332)||(40290-40380)
[»] scaffold0023 (3 HSPs)
scaffold0023 (201-257)||(86154-86210)
scaffold0023 (201-278)||(53344-53420)
scaffold0023 (205-278)||(58537-58609)
[»] scaffold0133 (1 HSPs)
scaffold0133 (128-278)||(3543-3685)
[»] scaffold0032 (2 HSPs)
scaffold0032 (251-360)||(121728-121839)
scaffold0032 (201-278)||(110200-110276)
[»] scaffold0347 (1 HSPs)
scaffold0347 (201-326)||(3603-3727)
[»] scaffold0112 (1 HSPs)
scaffold0112 (80-171)||(11964-12057)
[»] scaffold0833 (1 HSPs)
scaffold0833 (201-278)||(5341-5417)
[»] scaffold0034 (1 HSPs)
scaffold0034 (204-257)||(77540-77593)
[»] scaffold0357 (1 HSPs)
scaffold0357 (127-278)||(5923-6066)
[»] scaffold0342 (1 HSPs)
scaffold0342 (201-257)||(2663-2719)
[»] scaffold0292 (1 HSPs)
scaffold0292 (201-257)||(17674-17730)
[»] scaffold0171 (1 HSPs)
scaffold0171 (201-257)||(30977-31033)
[»] scaffold0116 (1 HSPs)
scaffold0116 (201-257)||(27889-27945)
[»] scaffold0051 (1 HSPs)
scaffold0051 (201-257)||(56145-56201)
[»] scaffold0039 (1 HSPs)
scaffold0039 (201-257)||(21349-21405)
[»] scaffold0003 (1 HSPs)
scaffold0003 (201-257)||(5160-5216)
[»] scaffold0315 (1 HSPs)
scaffold0315 (203-257)||(16711-16765)
[»] scaffold0158 (2 HSPs)
scaffold0158 (203-257)||(16317-16371)
scaffold0158 (203-257)||(22981-23035)
[»] scaffold0049 (1 HSPs)
scaffold0049 (201-283)||(30589-30670)
[»] scaffold1486 (1 HSPs)
scaffold1486 (201-278)||(1002-1078)
[»] scaffold0130 (2 HSPs)
scaffold0130 (201-278)||(13114-13190)
scaffold0130 (201-257)||(31059-31115)
[»] scaffold0001 (2 HSPs)
scaffold0001 (201-278)||(166400-166476)
scaffold0001 (201-246)||(166969-167014)
[»] scaffold0447 (1 HSPs)
scaffold0447 (201-257)||(2414-2470)
[»] scaffold0383 (2 HSPs)
scaffold0383 (201-257)||(267-323)
scaffold0383 (201-257)||(5278-5334)
[»] scaffold0335 (1 HSPs)
scaffold0335 (201-257)||(10127-10183)
[»] scaffold0269 (2 HSPs)
scaffold0269 (201-257)||(220-276)
scaffold0269 (201-252)||(2995-3046)
[»] scaffold0226 (1 HSPs)
scaffold0226 (201-257)||(15244-15300)
[»] scaffold0044 (1 HSPs)
scaffold0044 (201-257)||(94206-94262)
[»] scaffold0026 (1 HSPs)
scaffold0026 (201-253)||(27107-27159)
[»] scaffold0148 (1 HSPs)
scaffold0148 (128-278)||(36093-36235)
[»] scaffold0057 (1 HSPs)
scaffold0057 (95-286)||(4101-4289)
[»] scaffold0219 (1 HSPs)
scaffold0219 (127-278)||(25805-25947)
[»] scaffold0183 (2 HSPs)
scaffold0183 (213-278)||(8645-8709)
scaffold0183 (319-360)||(8775-8816)
[»] scaffold0529 (1 HSPs)
scaffold0529 (201-257)||(743-799)
[»] scaffold0483 (1 HSPs)
scaffold0483 (201-257)||(4836-4892)
[»] scaffold0384 (1 HSPs)
scaffold0384 (201-257)||(453-509)
[»] scaffold0258 (2 HSPs)
scaffold0258 (9-123)||(8331-8447)
scaffold0258 (201-277)||(8521-8596)
[»] scaffold0138 (4 HSPs)
scaffold0138 (201-257)||(26390-26446)
scaffold0138 (9-50)||(18694-18735)
scaffold0138 (199-233)||(18894-18928)
scaffold0138 (201-233)||(24303-24335)
[»] scaffold0109 (1 HSPs)
scaffold0109 (201-257)||(49676-49732)
[»] scaffold0077 (1 HSPs)
scaffold0077 (201-257)||(24580-24636)
[»] scaffold0092 (2 HSPs)
scaffold0092 (201-248)||(13103-13150)
scaffold0092 (201-233)||(1598-1630)
[»] scaffold0035 (1 HSPs)
scaffold0035 (202-327)||(64281-64405)
[»] scaffold0010 (1 HSPs)
scaffold0010 (201-286)||(29369-29448)
[»] scaffold0597 (1 HSPs)
scaffold0597 (201-257)||(3088-3144)
[»] scaffold0020 (1 HSPs)
scaffold0020 (128-278)||(104151-104293)
[»] scaffold0327 (1 HSPs)
scaffold0327 (9-50)||(6954-6995)
[»] scaffold0165 (1 HSPs)
scaffold0165 (199-278)||(20385-20459)
[»] scaffold0442 (1 HSPs)
scaffold0442 (165-233)||(1851-1917)
[»] scaffold0253 (1 HSPs)
scaffold0253 (208-252)||(4014-4058)
[»] scaffold0031 (1 HSPs)
scaffold0031 (201-284)||(99023-99100)
[»] scaffold0222 (1 HSPs)
scaffold0222 (201-236)||(28521-28556)
[»] scaffold0132 (1 HSPs)
scaffold0132 (201-232)||(40924-40955)
[»] scaffold0013 (2 HSPs)
scaffold0013 (310-357)||(16636-16683)
scaffold0013 (14-54)||(16749-16789)
[»] scaffold1068 (1 HSPs)
scaffold1068 (201-278)||(1514-1585)
[»] scaffold0700 (1 HSPs)
scaffold0700 (200-233)||(853-886)
[»] scaffold0521 (1 HSPs)
scaffold0521 (200-233)||(6836-6869)
[»] scaffold0022 (2 HSPs)
scaffold0022 (200-233)||(114173-114206)
scaffold0022 (200-233)||(130146-130179)
[»] scaffold0786 (1 HSPs)
scaffold0786 (201-233)||(5009-5041)
[»] scaffold0507 (1 HSPs)
scaffold0507 (201-233)||(5278-5310)
[»] scaffold0503 (1 HSPs)
scaffold0503 (201-233)||(9629-9661)
[»] scaffold0434 (1 HSPs)
scaffold0434 (201-233)||(2852-2884)
[»] scaffold0390 (1 HSPs)
scaffold0390 (201-233)||(3542-3574)
[»] scaffold0338 (1 HSPs)
scaffold0338 (201-233)||(6927-6959)
[»] scaffold0151 (1 HSPs)
scaffold0151 (201-233)||(31523-31555)
[»] scaffold0125 (1 HSPs)
scaffold0125 (201-257)||(29577-29633)
[»] scaffold0121 (1 HSPs)
scaffold0121 (201-233)||(7244-7276)
[»] scaffold0102 (1 HSPs)
scaffold0102 (201-233)||(45841-45873)
[»] scaffold0080 (1 HSPs)
scaffold0080 (201-233)||(25487-25519)
[»] scaffold0068 (1 HSPs)
scaffold0068 (201-233)||(59810-59842)
[»] scaffold0021 (1 HSPs)
scaffold0021 (200-232)||(76532-76564)


Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 360
Target Start/End: Complemental strand, 5373226 - 5372874
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  5373226 acatcatcatataaattctccaaatcccaacatatgggtaaaatctccataataaataaattcaacaaagacataaagactaacgtcctaatcagagcct 5373127  T
Q  109 aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctac 207  Q
    |||||||||||||||||||||||||| |||| ||| | ||||||| |||| | |||||||||||||||||||||||||||||||  | ||   |||||||    
T  5373126 aatctaagactccaagaaacgataacagagattagcttccgctatccaagcaatcatcaagcaactcaccaaaagcaaactagtcatgcacgccgtctac 5373027  T
Q  208 ccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaatt 306  Q
    |||| |||||| | ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||    
T  5373026 ccattcatacaaacaggtaggcggtccatcacatatctact-ggggtaagcttcacatcaatcataatcaacataaacaaacataagcattcaaggattt 5372928  T
Q  307 catgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  5372927 catgcataacacatatacataatcatccctcctagaatactagcatcacatgat 5372874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 9 - 293
Target Start/End: Complemental strand, 12136393 - 12136116
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  12136393 acatcatcatataaattctccaagtaccgacatgtgggtaaaatctcaataataaataaatccaacaaagacataa-gaccaacatcctaatcagagcct 12136295  T
Q  109 aatctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacc 208  Q
    ||||||||||||||||| |||||||||||||||| | ||||||| |||| | ||| ||||||||||||||||||||||||| | || || ||||||||||    
T  12136294 aatctaagactccaagatacgataacggagatagcttccgctatccaagcaatcaccaagcaactcaccaaaagcaaactaatcctgcacttcgtctacc 12136195  T
Q  209 catccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataa 293  Q
    |||||||||||| |||||||||||| |      | ||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  12136194 catccatacagacaggtaggcggtcga------aaccattggtggtaaccttcacatcaatcataatcaacataaacaaacataa 12136116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 360
Target Start/End: Complemental strand, 15116209 - 15116051
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    ||||||| |||||||||||| | | |||| |||||||||||||||||||||||||||  | |||||||||||||||||||| |||||| |||| ||| ||    
T  15116209 cgtctacacatccatacagacatgcaggcagtccatcacagatccactgggggtaagtattacatcaatcataatcaacat-aacaaatataagcattca 15116111  T
Q  301 agaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || | |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  15116110 aggaatcatgcataacacataaacataatcatccctcctagaatactagcatcacatgat 15116051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 12732271 - 12732409
Alignment:
Q  21 aaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaagact 119  Q
    |||||||||||||  ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  12732271 aaattctccaaatttcgacatacgtgtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaaatctaggact 12732370  T
Q  120 ccaagaaacgataacggaga-taggtcccgctattcaag 157  Q
    |||||||| ||||||||||| ||| ||||||||| ||||    
T  12732371 ccaagaaatgataacggagattagctcccgctatccaag 12732409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 165 - 360
Target Start/End: Complemental strand, 54366025 - 54365835
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    |||||||||||||||||||||| || | || || ||||||||||||| |||||| | ||||| || ||| |      | ||||| |||||||||||||||    
T  54366025 caagcaactcaccaaaagcaaattaatcctgcacttcgtctacccattcatacaaacaggtatgctgtcaa------aaccacttggggtaagcttcaca 54365932  T
Q  265 tcaatcataatcaacataaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||| ||||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||| ||| ||||| |||||||||| |||||||||||    
T  54365931 tcattcataatcaacataaacaaacataagcattcaaggatttcatgcataacacatatacatacccacccctcctagaatactaacatcacatgat 54365835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 213 - 360
Target Start/End: Complemental strand, 15216141 - 15215994
Alignment:
Q  213 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaattcatgc 311  Q
    |||||| | |||||||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||| ||| ||| || ||||| |    
T  15216141 catacaaacaggtaggcagtccatcacagatccactaggtgtaagcttcacatcaatcataatcaacgtaaac-aacataagcattcaaggatttcatac 15216043  T
Q  312 ataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||    
T  15216042 ataacacatatacataaacatccctcctaaaatactagcatcacatgat 15215994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 19083049 - 19082906
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtcctaatcagagcc 107  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||| || | ||||||||||  || ||||||||||||||    
T  19083049 acatcaccatataaaatctccaaatcccgacatatgcgtaaaatctcaacaacataataaatccagcata-acataaagactgacatcctaatcagagcc 19082951  T
Q  108 taatctaagactccaagaaacga-taacggagataggtcccgctat 152  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||    
T  19082950 taatctaagactccaa-aaacgaataacggagatagctcccgctat 19082906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 99 - 323
Target Start/End: Complemental strand, 41919253 - 41919034
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||| |||| | ||| ||  |||||||||||||||||| || | || ||    
T  41919253 atcagagcctaccctaagactcaaaggaaacaataacggagatagctcccgctatccaagcaatcaccagacaactcaccaaaagcaaattaatcctgca 41919154  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacat 297  Q
     ||||||||| |||||||||||| |||||||||||      || | ||||| ||||||||||| |||||||||| |||||||||||||||||| || |||    
T  41919153 cttcgtctactcatccatacagacaggtaggcggt------caaaaccact-ggggtaagctttacatcaatcaaaatcaacataaacaaacacaagcat 41919061  T
Q  298 gcaagaat-tcatgcataacacatata 323  Q
     |||| || |||||||| ||| |||||    
T  41919060 tcaaggatatcatgcatgacatatata 41919034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 359
Target Start/End: Original strand, 9650118 - 9650265
Alignment:
Q  213 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacatgcaagaatt-catg 310  Q
    |||||| ||| |||||||||||| |||||| ||| ||||||| ||||| ||||||||||||||||| ||||||||| ||||||||  |||| ||| ||||    
T  9650118 catacaaatatgtaggcggtccaccacaga-ccattgggggttagcttgacatcaatcataatcaaacataaacaatcataaacactcaaggatttcatg 9650216  T
Q  311 cataacacatatacataaccatccctcgtagaatactagcatcacatga 359  Q
    ||| |||| |||||||||||||||||| ||||||| || ||||||||||    
T  9650217 catgacacgtatacataaccatccctcttagaatattaacatcacatga 9650265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 13596021 - 13595908
Alignment:
Q  112 ctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctaccca 210  Q
    ||||||||| ||| |||||||||||||||||| |||| |||| |||| | ||| ||||||||||||||||||||||||| | || || ||||||||||||    
T  13596021 ctaagactcaaaggaaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccaaaagcaaactaatcctacacttcgtctaccca 13595922  T
Q  211 tccatacagatagg 224  Q
    ||||||||| ||||    
T  13595921 tccatacaggtagg 13595908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 14569666 - 14569751
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||| ||||||    
T  14569666 cgtctacccattcatacaaataggtaggcggtccaccacaga-ccattgggggttagcttcacatcaatcataatcaacaaaaacaa 14569751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 55378825 - 55378769
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  55378825 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 55378769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 43283354 - 43283273
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 283  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  | ||||| ||||||||| ||||||    
T  43283354 cgtctacccatccatacagacaggtaggcggtccatcacagatctactgggggtaagtattacatc-atcataatccacataa 43283273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 8372546 - 8372602
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  8372546 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 8372602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 15274724 - 15274668
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15274724 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 15274668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 18246117 - 18246173
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18246117 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 18246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 26678118 - 26678174
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  26678118 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 26678174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 10642313 - 10642369
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  10642313 cgtctacccatccatacagataggcaggtggtccatcacagatccactaggggtaag 10642369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 18166813 - 18166869
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  18166813 cgtctacccatccatacagataggcaggcggtccataacaaatccactgggggtaag 18166869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 19699667 - 19699611
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  19699667 cgtctacccatccatacagataggcaggcggtccataacagatccattgggggtaag 19699611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 19710252 - 19710196
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  19710252 cgtctacccatccatacagataggcaggcggtccataacagatccattgggggtaag 19710196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 19998456 - 19998512
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  19998456 cgtctactcatccatacagataggcaggcggtccataacagatccactgggggtaag 19998512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 34393324 - 34393380
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  34393324 cgtctacccatccatacagacaggtaggcggtccatcatagatccactggaggtaag 34393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 50224105 - 50223991
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    ||||||| ||||||||||||| ||| |  | || |||||||||||||||||||||| |||||||||||      || | ||||| ||||||||||| |||    
T  50224105 caagcaattcaccaaaagcaa-ctaatcgtgcacttcgtctacccatccatacagacaggtaggcggt------caaaaccactaggggtaagctttaca 50224013  T
Q  265 tcaatcataatcaacataaaca 286  Q
    |||||||||||| |||||||||    
T  50224012 tcaatcataatccacataaaca 50223991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 99 - 278
Target Start/End: Original strand, 19557499 - 19557671
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| ||||| |||||||||||| || |||||| |||| | ||| ||||||||||| ||||| | ||||| | || ||    
T  19557499 atcagagcctatcctaagactctaaggaaacggtaacggagatagctctcgctatccaaggaatcaccaagcaactcatcaaaaac-aactaatcctgca 19557597  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
     |||||||| |||||||||| || |||||||||||      || | ||||| ||||||||||| ||||||| |||||||||    
T  19557598 cttcgtcta-ccatccatactgacaggtaggcggt------caaaaccactaggggtaagctttacatcaaacataatcaa 19557671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 7134565 - 7134513
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactggggg 253  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  7134565 cgtctacccatccatacagataggcaggcggtccataacatatccactggggg 7134513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 9293651 - 9293707
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||    
T  9293651 cgtctacccatccatacagataggcaggtggtccattacagatccacttggggtaag 9293707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 15211454 - 15211510
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||    
T  15211454 cgtctacccatccatacagataagcaggcggtccagcacagatccactaggggtaag 15211510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 17150309 - 17150253
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  17150309 cgtctactcatccatacaaataggcaggcggtccataacagatccactgggggtaag 17150253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 38763040 - 38763112
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||||||||||||||||||| |||||||||||| |      | ||||||||||||||||| |||||||||||||||||    
T  38763040 tcgtctacccatccatacagacaggtaggcggtcaa------aaccactgggggtaagctttacatcaatcataatcaa 38763112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 19624142 - 19624090
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca 62  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  19624142 acatcatcatataaaatctccaaatcccgacatat-ggtaaaatctccataaca 19624090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 284
Target Start/End: Complemental strand, 10239446 - 10239268
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||  |||| ||||  ||| | ||| ||||||||||||| |||||  |||| |  | ||    
T  10239446 atcagagcctatcctaagactctaaggaaacgataacggagataactccctctatctaagcaatcaccaagcaactcacc-aaagc-gactaatcttgca 10239349  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 284  Q
     |||||||||||||||||| ||| ||||||| |||      || | ||||| ||||||||||| ||| ||||||||||| |||||||    
T  10239348 cttcgtctacccatccatatagacaggtaggtggt------caaaaccactaggggtaagctttacaacaatcataatccacataaa 10239268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 14569472 - 14569522
Alignment:
Q  11 atcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca 62  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  14569472 atcatcatataaaatctccaaatccc-acatatgggcaaaatctcaataaca 14569522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 24237195 - 24237233
Alignment:
Q  246 actgggggtaagcttcacatcaatcataatcaacataaa 284  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  24237195 actgggggttagcttcacatcaatcataatcaacataaa 24237233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 47470282 - 47470166
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccact--gggggtaagcttca 262  Q
    ||||||||||||||||||||| ||| |  | || |||||||||||||||||||||| | ||||| |||| |      | |||||  |||||||||||| |    
T  47470282 caagcaactcaccaaaagcaa-ctaatcatgcacttcgtctacccatccatacagacaagtaggtggtcaa------aaccactaggggggtaagcttta 47470190  T
Q  263 catcaatcataatcaacataaaca 286  Q
    |||||||||||||| |||||||||    
T  47470189 catcaatcataatccacataaaca 47470166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 16520740 - 16520796
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| |  | || ||| ||||||||||||||||||||    
T  16520740 cgtctacccatccatacagataggcatacagttcataacagatccactgggggtaag 16520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 17378136 - 17378031
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    ||||||||||||| ||||||||||| | |  || |||||||||||||  ||||| | |||||||||||      || | | |||||||||||| ||||||    
T  17378136 caagcaactcaccgaaagcaaactaatcccgcacttcgtctacccattgatacaaacaggtaggcggt------caaaactactgggggtaagtttcaca 17378043  T
Q  265 tcaatcataatc 276  Q
    ||||||||||||    
T  17378042 tcaatcataatc 17378031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 22356677 - 22356621
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| || ||||||||  | ||||||||||||| ||||||||||||||||||||    
T  22356677 cgtctactcacccatacaggcaagtaggcggtccataacagatccactgggggtaag 22356621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 37958953 - 37958921
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||||||||||||||||    
T  37958953 cgtctacccatccatacagataggtaggcggtc 37958921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 5407412 - 5407484
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||| |||||||||||| || ||||||||| |      | ||||||||||||||||| |||||||||||||||||    
T  5407412 tcgtctactcatccatacagacagataggcggtcaa------aaccactgggggtaagctttacatcaatcataatcaa 5407484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 15216351 - 15216320
Alignment:
Q  9 acatcatcatataaattctccaaatcccgaca 40  Q
    ||||||||||||||||||||||||||||||||    
T  15216351 acatcatcatataaattctccaaatcccgaca 15216320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 287
Target Start/End: Original strand, 42707007 - 42707050
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||    
T  42707007 ccactgggggtaagcattacatcaatcataatccacataaacaa 42707050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 15216245 - 15216191
Alignment:
Q  99 atcagagccta-atctaagactccaagaaacgataacggagataggtcccgctat 152  Q
    ||||||||||| |||||||||||||||||  ||||||| |||||| |||||||||    
T  15216245 atcagagcctacatctaagactccaagaagagataacgaagatagctcccgctat 15216191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 19623914 - 19623872
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||    
T  19623914 ccactaggggttagcttcacataaatcataatcaacataaaca 19623872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 24237077 - 24237137
Alignment:
Q  99 atcagagcctaatctaagactc--caagaaacgataacggagataggtcccgctattcaag 157  Q
    ||||||||||| ||||||||||  ||  |||||||||||||||||| ||||||||| ||||    
T  24237077 atcagagcctactctaagactcagcagaaaacgataacggagatagctcccgctatccaag 24237137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 41918976 - 41918935
Alignment:
Q  319 atatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||| ||||||||||||  ||||||||||||||||||||||    
T  41918976 atatatataaccatcccttctagaatactagcatcacatgat 41918935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 7187837 - 7187805
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  7187837 cgtctacccatccatacagacaggtaggcggtc 7187805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 7966506 - 7966474
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  7966506 cgtctacccatccatacagacaggtaggcggtc 7966474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 13449007 - 13448913
Alignment:
Q  137 agataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 233  Q
    |||||| ||||||||| |||| | ||| | |||||||||||||| |||| |||   || || |||||||||||||||||||||  ||||||||||||    
T  13449007 agatagctcccgctatccaagcaatcaccgagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctacccatccatacaggcaggtaggcggtc 13448913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 17213740 - 17213700
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaa 284  Q
    ||||||||| | |||||||||||||||||||||| ||||||    
T  17213740 ccactggggattagcttcacatcaatcataatcaccataaa 17213700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 18496389 - 18496357
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  18496389 cgtctacccatccatacagacaggtaggcggtc 18496357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 20813945 - 20813913
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  20813945 cgtctacccatccatacagacaggtaggcggtc 20813913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 21961495 - 21961463
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  21961495 cgtctacccatccatacagacaggtaggcggtc 21961463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 30236466 - 30236434
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  30236466 cgtctacccatccatacagacaggtaggcggtc 30236434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 34198080 - 34198048
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  34198080 cgtctacccatccatacagacaggtaggcggtc 34198048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 41167824 - 41167792
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  41167824 cgtctacccatccatacagacaggtaggcggtc 41167792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 41258213 - 41258177
Alignment:
Q  250 ggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  41258213 ggggtaagctttacatcaatcataatccacataaaca 41258177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 44054113 - 44054145
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  44054113 cgtctacccatccatacagacaggtaggcggtc 44054145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 9 - 360
Target Start/End: Complemental strand, 20456672 - 20456319
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  20456672 acatcatcatataaattctccaaatcccgacatatgggtaaaatctccataataaataaatccaacaaagacataaagatcaacgtcctaatcagagcct 20456573  T
Q  109 aatctaagactccaagaaacgataacggaga-taggtcccgcta--ttcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtct 205  Q
    ||||||||||||||||||||||||||| ||| ||| | ||||||  | | || | |||| ||||||||||||||||||||||||||  | ||   |||||    
T  20456572 aatctaagactccaagaaacgataacgaagattagcttccgctatgtcctagcaatcattaagcaactcaccaaaagcaaactagtcatgcacgccgtct 20456473  T
Q  206 acccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaa 304  Q
    |||||| |||||| | ||||||||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||     
T  20456472 acccattcatacaaacaggtaggcggtccatcacagatcta--gtgggtaagcttcacatcaatcataatcaacataaacaaacataagcattcaaggat 20456375  T
Q  305 ttcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  20456374 ttcatgcataacacatatacataaccatccctcctataatactagcatcacatgat 20456319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 360
Target Start/End: Complemental strand, 14345779 - 14345412
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaa---------ga-----cataaagaccaacgt 94  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||         ||     |||||||||  || |    
T  14345779 acatcatcatataaattcttcaagtcccgacatatgggtaaaatctcaataataaataaatccagcaaaaccaatctagaataatcataaagacagacat 14345680  T
Q  95 ccta-atcagagccta-atctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagtt 192  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| || | | ||| ||| ||||||||| ||||||||||| |     
T  14345679 cctagatcaaagcctacatctaagactccaagaaacgataacggagatagctcccgctatccacgcaatcaccaaacaactcaccgaaagcaaactaatc 14345580  T
Q  193 cttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacata 292  Q
     | ||    |||||||||| |||||| | | ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||    
T  14345579 ttgcacgctgtctacccattcatacaaacaagtaggcggtccatcacagatccatttggggtaagcttcacattaatcataatcaacataaacaaacata 14345480  T
Q  293 aacatgcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
     ||||  ||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  14345479 gacattaaaggattcatgcataacacatatacataatcatccctcctagaatactagcatcacatgat 14345412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 124 - 360
Target Start/End: Original strand, 11963789 - 11964025
Alignment:
Q  124 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 223  Q
    |||||||||||| |||||| ||||||||| |||| | ||| ||||||||||||||||||||||||| | || ||   |||||||  |  |||||| | ||    
T  11963789 gaaacgataacgaagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagcaaactaatcctgcaccccgtctactaagtcatacaaacag 11963888  T
Q  224 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatata 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||||| |||||    
T  11963889 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataggcattcaaggattcatgcataacatatata 11963988  T
Q  324 cataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||| |||||||| |||| |||||||||||||||||    
T  11963989 cataatcatccctcctagactactagcatcacatgat 11964025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 13 - 316
Target Start/End: Complemental strand, 16837840 - 16837553
Alignment:
Q  13 catcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aat 111  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||| |||    
T  16837840 catcatataaattctccaaatcccgacttatgggttaaatctcaataataaataaatccatcaaagacataaagaccaatgtcctaatcagagcctaaat 16837741  T
Q  112 ctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctaccca 210  Q
    ||||||||||||||||| |||||||||| ||| ||||||||| ||||             ||||||||||||||||||| | || || ||||||||||||    
T  16837740 ctaagactccaagaaacaataacggagattagctcccgctatccaag------------cactcaccaaaagcaaactactcctgcacttcgtctaccca 16837653  T
Q  211 tccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatg 310  Q
    |||||||||| ||||||| |||      || | |||||||| |||| ||| |||||||| |||||||||||||||||| |||| ||| |||| |||||||    
T  16837652 tccatacagacaggtaggtggt------caaaaccactgggagtaaactttacatcaattataatcaacataaacaaatataagcattcaaggattcatg 16837559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 201 - 360
Target Start/End: Complemental strand, 5453212 - 5453053
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||  | ||||||||||||||||||||||||||| |||| ||| ||    
T  5453212 cgtctacccatccatacagataggtaggcggttcatcacagatccatttggggtaagtattacatcaatcataatcaacataaacaaatataagcattca 5453113  T
Q  301 agaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || |||||||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  5453112 aggattcatgcataagacatatacataaccatccctccgagaatactagcatcacatgat 5453053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 23412050 - 23412199
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||    
T  23412050 acatcatcatataaattctccaaatcctgacatattggtaaaatctcaataataaataaatccaacaaagacataaagatgaacgtcctaatcatagcct 23412149  T
Q  109 aatctaagactccaagaaacgataacggaga-taggtcccgctattcaag 157  Q
    |||| ||||||||||||||| |||| ||||| ||| ||||||||| ||||    
T  23412150 aatcgaagactccaagaaacaataatggagattagctcccgctatccaag 23412199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 24227848 - 24227689
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatc---aacataaacaaacataaacat 297  Q
    |||||||||||| ||||||| ||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||   || |||||||||||||  |||    
T  24227848 cgtctacccatctatacagacaggtaggtggtccatcacataaacactgggggtaagcttcacatcaatcataatcaataaaataaacaaacatatgcat 24227749  T
Q  298 gcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacat 357  Q
     |||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  24227748 tcaaggattcatgcatagcacatatacataaccatccctcctaaaatactagcatcacat 24227689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 287
Target Start/End: Original strand, 19872082 - 19872264
Alignment:
Q  99 atcagagcctaatctaagactccaa-gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| || ||||| |||| |||||||| ||||||||| |||| | ||| ||||||||||||||||||| ||||| |  | ||    
T  19872082 atcagagcctaccctaagactctaaagaaacaataatggagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagc-aactaatcatgca 19872180  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
     |||||||||||||||||||||| |||||||||||      || | | ||||||||||||||| ||||||||||||||||||||||||||    
T  19872181 cttcgtctacccatccatacagacaggtaggcggt------caaaacaactgggggtaagctttacatcaatcataatcaacataaacaa 19872264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 323
Target Start/End: Original strand, 3671689 - 3671810
Alignment:
Q  202 gtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa 301  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  | | |||||||||||| |||||||||||| |||| ||| |||    
T  3671689 gtctacccatccatacagacaggtaggcggtccatcacagatccactaggggtaagtattatatcaatcataattaacataaacaaatataagcattcaa 3671788  T
Q  302 gaattcatgcataacacatata 323  Q
    | ||||| |||||||| |||||    
T  3671789 ggattcacgcataacatatata 3671810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 278
Target Start/End: Complemental strand, 3420812 - 3420666
Alignment:
Q  124 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 223  Q
    ||||||||||||||||||| | ||||||| |||| | ||| ||| ||||||||| ||||| ||||| | || || |||||||||||||||||||| | ||    
T  3420812 gaaacgataacggagatagcttccgctatccaagcaatcaccaaacaactcacc-aaagc-aactaatcctgcacttcgtctacccatccatacaaacag 3420715  T
Q  224 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||      || | ||||||||||||||||| |||||||||||||||||    
T  3420714 gtaggcggt------caaaaccactgggggtaagctttacatcaatcataatcaa 3420666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 276
Target Start/End: Original strand, 24082309 - 24082450
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||||||||||| ||||||||| |||| |  ||||||||||||||||||| |||| |||   || || ||| ||||||||||||||||||||||||    
T  24082309 acgataacggagatagctcccgctatccaagcaaccatcaagcaactcaccaaa-gcaa-ctaaccctgcacttcatctacccatccatacagataggta 24082406  T
Q  227 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatc 276  Q
    ||| ||      || | ||||||||||||||||| |||||||||||||||    
T  24082407 ggcagt------caaaaccactgggggtaagctttacatcaatcataatc 24082450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 10246 - 10302
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  10246 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 10302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 111234 - 111178
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  111234 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 111178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 1221887 - 1221831
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  1221887 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 1221831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 9732843 - 9732787
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  9732843 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 9732787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 10780366 - 10780310
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  10780366 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 10780310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 11340538 - 11340594
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  11340538 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 11340594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 18780296 - 18780240
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18780296 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 18780240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 25212043 - 25211987
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  25212043 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 25211987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 25276195 - 25276139
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  25276195 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 25276139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 34937510 - 34937566
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  34937510 cgtctacccatccatacagatatgcaggcggtccatcacagatccactgggggtaag 34937566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 280
Target Start/End: Complemental strand, 23236414 - 23236240
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| |||||||||  ||| | ||| |||||||||||||||| |||| ||| |  | ||    
T  23236414 atcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatctaagcaatcaccaagcaactcaccaaa-gcaa-ctaatcatgca 23236317  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaaca 280  Q
     |||||||||||||||||||||| ||||||| ||        | | ||| ||||||||||||| |||||||||||||||||||    
T  23236316 cttcgtctacccatccatacagacaggtaggtgg------ctaaaaccattgggggtaagctttacatcaatcataatcaaca 23236240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 23492175 - 23492256
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 283  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||  | ||||| ||||||||| ||||||    
T  23492175 cgtctacccagccatacagacaggtaggcggtccatcacagatccactaggggtaagtattacatc-atcataatccacataa 23492256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 17907754 - 17907830
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||  | ||||||| |||||||||    
T  17907754 cgtctacccatccatacagataggcaggcggtccataacagatccactaggggtaagtattacatcaa-cataatcaa 17907830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 17473953 - 17473897
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  17473953 cgtctacccatccatacagataggcaggcggtccataacagatccaatgggggtaag 17473897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 22885295 - 22885239
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  22885295 cgtctacccatccatacagataggcaggtggtccataacagatccactgggggtaag 22885239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 25944811 - 25944755
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  25944811 cgtctacccatccatacagacaggttggtggtccatcacagatccactgggggtaag 25944755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 28888154 - 28888206
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactggggg 253  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  28888154 cgtctacccatccatacagacaggtatgcggtccatcacagatccactggggg 28888206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 35793406 - 35793350
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  35793406 cgtctacccatccatacagatatgcaggcggtccataacagatccactgggggtaag 35793350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 11765555 - 11765500
Alignment:
Q  305 ttcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  11765555 ttcatgcataacacatatacataacaatccctcctataatactagcatcacatgat 11765500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 278
Target Start/End: Complemental strand, 26561762 - 26561621
Alignment:
Q  129 gataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtagg 228  Q
    ||||| |||||||| ||||||||| |||  | ||| |||||||||||||||| ||||  || |  | || |||||||||||||||||||||| |||||||    
T  26561762 gataatggagatagctcccgctatccaaccaatcaccaagcaactcaccaaa-gcaat-taatcatgcacttcgtctacccatccatacagacaggtagg 26561665  T
Q  229 cggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||      || |||||||| |||||||||| |||||||||||||||||    
T  26561664 cggt------caaatccactgagggtaagctttacatcaatcataatcaa 26561621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 11579861 - 11579917
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||    
T  11579861 cgtctacccatccatacagacaggcaggcggtccatcactgatccactaggggtaag 11579917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 29192918 - 29192862
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| || |||||||    
T  29192918 cgtctacccatccatacagataggcaggcggtccataacagatccagtgtgggtaag 29192862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 23412254 - 23412294
Alignment:
Q  246 actgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  23412254 actggggttaagcttcacatcaatcataatcaacataaaca 23412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 33628246 - 33628143
Alignment:
Q  130 ataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggc 229  Q
    ||||||||||||  ||||||||| |||| | ||| ||| ||| ||||||||| ||||||| | || || |||||||||||||  ||||| |||||||| |    
T  33628246 ataacggagataactcccgctatccaagcaatcaccaaacaattcaccaaaaacaaactaatcctgcacttcgtctacccatttatacaaataggtagac 33628147  T
Q  230 ggtc 233  Q
    ||||    
T  33628146 ggtc 33628143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 6454900 - 6455004
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||||||||||| |||| |||| |||| |  || |||||||||||||||| |||| |||   || || | |||||||||||||||||||| |||||    
T  6454900 acgataacggagatagctcccactatccaagcaaccaccaagcaactcaccaaa-gcaa-ctaaccctgcactccgtctacccatccatacagacaggta 6454997  T
Q  227 ggcggtc 233  Q
    |||||||    
T  6454998 ggcggtc 6455004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 37985911 - 37985957
Alignment:
Q  16 catataaattctccaaatcccgacatatgggtaaaatctcaataaca 62  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||    
T  37985911 catataaaatctccaaatcccgacatatgggaaaaatctcaagaaca 37985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 5623527 - 5623486
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  5623527 acatcatcataaaaattctccaaatcccgacaaatgggtaaa 5623486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 43445962 - 43445906
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| || ||||||||  | ||||||||||||| ||||||||||||||||||||    
T  43445962 cgtctactcacccatacaggcaagtaggcggtccataacagatccactgggggtaag 43445906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 431044 - 431095
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    |||||||| ||||||| ||| | ||||||||||||||||| |||||||||||    
T  431044 cgtctacctatccatatagacaagtaggcggtccatcacatatccactgggg 431095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 37190021 - 37189945
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 283  Q
    |||||||||||||||||||| |||||||||||      || | ||||||||||||||  | ||||||||||||||| ||||||    
T  37190021 cgtctacccatccatacagacaggtaggcggt------caaaaccactgggggtaagtattacatcaatcataatccacataa 37189945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 3671836 - 3671877
Alignment:
Q  319 atatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||| |||||||||| || ||||||||||||||||||||||    
T  3671836 atatatataaccatccatcctagaatactagcatcacatgat 3671877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 11765719 - 11765666
Alignment:
Q  99 atcagagcctaatctaagactccaagaaacgataacggagataggtcccgctat 152  Q
    ||||||||||| ||||| |||||||  | ||||||||||||||| |||||||||    
T  11765719 atcagagcctactctaaaactccaaagaccgataacggagatagctcccgctat 11765666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 11765821 - 11765769
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca 62  Q
    ||||||||||||||| |||| |||||| |||||||||| |||||||||| ||||    
T  11765821 acatcatcatataaaatctcaaaatcc-gacatatgggcaaaatctcaacaaca 11765769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 19497875 - 19497931
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| || ||||||||  | ||||||||||||  ||||||||||||||||||||    
T  19497875 cgtctactcacccatacaggcaagtaggcggtccaaaacagatccactgggggtaag 19497931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 20710717 - 20710749
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  20710717 cgtctacccatccatacagacaggtaggcggtc 20710749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 21392377 - 21392409
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  21392377 cgtctacccatccatacagacaggtaggcggtc 21392409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 21661647 - 21661615
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  21661647 cgtctacccatccatacagacaggtaggcggtc 21661615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 23453129 - 23453161
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  23453129 cgtctacccatccatacagacaggtaggcggtc 23453161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 23460373 - 23460405
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  23460373 cgtctacccatccatacagacaggtaggcggtc 23460405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 23464634 - 23464666
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  23464634 cgtctacccatccatacagacaggtaggcggtc 23464666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 1e-94; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 9 - 360
Target Start/End: Original strand, 22319700 - 22320040
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  22319700 acatcatcatataaattctctaaatcccgacatatgggtaaaatctcaataataaatagatccgacaaagacataaagaccaacgtcctaatcagagcct 22319799  T
Q  109 -aatctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctac 207  Q
     ||||| |||||||||||||||||||||||||||| ||||||||| ||||       |||     ||| | ||||||||||| | || ||   |||||||    
T  22319800 aaatcttagactccaagaaacgataacggagatagctcccgctatccaag-------caa-----tcagcgaaagcaaactaatcctgcacgccgtctac 22319887  T
Q  208 ccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaatt 306  Q
    |||| |||| | | |||||||||| |||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||| || ||    
T  22319888 ccattcatataaacaggtaggcgg-ccatcatagatccactgggggtaagttttacatcaatcataatcaacataaacaaacataagcattcaaggattt 22319986  T
Q  307 catgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  22319987 catgcataacacatatatataaccatccctcctagaatactagcatcacatgat 22320040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 22311120 - 22311433
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  22311120 acatcatcatgtaaattctccaaatcccgacatatgggtaaaatctcaataataaatagatccaacaaagacataaagaccaacatcctaattagagcct 22311219  T
Q  109 -aatctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctac 207  Q
     |||||||||||||||||||||||||||||||||| ||||||||| |||| | ||| ||||||||||||| |||| |||||| |  | ||   |||||||    
T  22311220 aaatctaagactccaagaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccgaaagaaaactaatcatgcacgccgtctac 22311319  T
Q  208 ccatccatacagataggtaggcggtccatcacagatccact-gggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaat 305  Q
    |||| |||||| | |||||| |||| ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||| ||| || |    
T  22311320 ccattcatacaaacaggtagccggttcatcacagatccactcgggggtaagctttacattaatcataatcaacataaacaaacataagcattcaaggatt 22311419  T
Q  306 tcatgcataacaca 319  Q
    ||||||||||||||    
T  22311420 tcatgcataacaca 22311433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 99 - 360
Target Start/End: Complemental strand, 19334042 - 19333780
Alignment:
Q  99 atcagagcctaa-tctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||| | ||| ||||||||||||| ||||||||||| | || ||    
T  19334042 atcagagcctaaatctaagactccaagaaacgataatggagatagctcccgctatccaagcaatcaccaagcaactcaccgaaagcaaactaatcctgca 19333943  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacat 297  Q
     |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||  |||    
T  19333942 cttcgtctacccatccatacagacaggtaggcgatccatcacagatccactaggggtaaacttcatatcaatcataatcaacataaacaagcataggcat 19333843  T
Q  298 gcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
     |||| |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||    
T  19333842 tcaaggattcatgcataacacatatacataaccatccctcctaaaatcctagcatcacatgat 19333780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 99 - 360
Target Start/End: Complemental strand, 45561710 - 45561445
Alignment:
Q  99 atcagagcctaa-tctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||   ||| |||||||||||||||||||||| || | || ||    
T  45561710 atcagagcctaaatctaagactccaagaaacgataacagagatagctcccgctatccaagcgatcaccaagcaactcaccaaaagcaaattaatcctgca 45561611  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatc---aacataaacaaacataaa 294  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||   || ||||||||||||||     
T  45561610 cttcgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaagcttcgcattaatcataatcaataaaataaacaaacataag 45561511  T
Q  295 catgcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||| |||| ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||    
T  45561510 cattcaaggattcatgcatagcacatatacataaccatccctcctaaaatactagcatcacatgat 45561445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 99 - 360
Target Start/End: Original strand, 17264666 - 17264928
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| |||| | |||||||| ||||||||||||||||||||||  |  |    
T  17264666 atcagagcctaccctaagactcaaaggaaacgataacggagatagctcccgctatccaagcaatcatcaagaaactcaccaaaagcaaactagtcatgta 17264765  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacat 297  Q
     || |||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||    
T  17264766 ctttgtctactcatccatacagacaggtaggcggtccatcacagatccactggaggtaagcttcacatcaatcataatcaacataaataaacataggcat 17264865  T
Q  298 gcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
     |||| ||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||    
T  17264866 tcaaggattcatgcataacacatatacataatcacccctcctagaatactagcatcatatgat 17264928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 357
Target Start/End: Original strand, 11600137 - 11600470
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  11600137 acatcatcatataaattcttcaaatcccaacatatgggtaaagtctcaataataaataaatccaacaaagacataaagaccaacgttctaatcagagcct 11600236  T
Q  109 -aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtcta 206  Q
     |||||| |||||||||||||||||||| ||| ||| || |||||| ||||             ||||||||||||||||||| |  | || | ||||||    
T  11600237 aaatctaggactccaagaaacgataacgaagattagctctcgctatccaag------------cactcaccaaaagcaaactactcatgcactccgtcta 11600324  T
Q  207 cccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaat 305  Q
    ||||| |||||| | |||||||||||      || | |||||||| ||||||||||||||||||| |||| |||||||||||||||| ||| ||| || |    
T  11600325 cccattcatacaaacaggtaggcggt------caaaaccactgggagtaagcttcacatcaatcacaatccacataaacaaacataagcattcaaggatt 11600418  T
Q  306 tcatgcataacacatatacataaccatccctcgtagaatactagcatcacat 357  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  11600419 tcatgcataacacatatatataaccatccctcctagaatactagcatcacat 11600470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 25608087 - 25608329
Alignment:
Q  113 taagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatc 212  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||| | ||| ||||||   |||||||||||||||| |  | ||   |||||||||||     
T  25608087 taagactccaaaaaacgataacggagatagctcccgctatccaagcaatcaccaagca---caccaaaagcaaactaatcttgcacgccgtctacccatt 25608183  T
Q  213 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgca 312  Q
    |||||| | ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  25608184 catacaaacaggtaggcggtccatgacagatccactggg--taagcttcacatcaatcataatcaacataaacaaacataagcatttaagaattcatgca 25608281  T
Q  313 taacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || ||||||||||||| |||||||| || |||||||||||||||||||    
T  25608282 tagcacatatacataaacatccctcctataatactagcatcacatgat 25608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 165 - 360
Target Start/End: Original strand, 23216880 - 23217074
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    |||||| |||||| ||||||||||| | || ||   ||||||||||| || ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23216880 caagcagctcaccgaaagcaaactaatcctgcacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactgggggtaagcttcaca 23216978  T
Q  265 tcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||    
T  23216979 tcaatcataatcaacataaacaaacataggcattcaaggattcatgcataacacatatacataatcatccctcctaaaatactagtatcacatgat 23217074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 201 - 360
Target Start/End: Original strand, 25293794 - 25293952
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||| ||||  || ||    
T  25293794 cgtctacccatc-atacagacaggtaggcggtccatcacagatccactgggggtaagtattacatcaatcataatcaacataaacaaatataagtattca 25293892  T
Q  301 agaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25293893 aggattcatgcataacacatatacataaccatccctcctagaatactagcatcacatgat 25293952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 201 - 360
Target Start/End: Original strand, 25755783 - 25755941
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||| ||||  || ||    
T  25755783 cgtctacccatc-atacagacaggtaggcggtccatcacagatccactgggggtaagtattacatcaatcataatcaacataaacaaatataagtattca 25755881  T
Q  301 agaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25755882 aggattcatgcataacacatatacataaccatccctcctagaatactagcatcacatgat 25755941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 16000244 - 16000374
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  16000244 acatcatcatataaattctctaaatcctgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgttctaatcagagcct 16000343  T
Q  109 aatctaagactccaagaaacgataacggagat 140  Q
    |||||||||||||||| |||||||||||||||    
T  16000344 aatctaagactccaag-aacgataacggagat 16000374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 22883851 - 22883982
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  22883851 acatcatcatataaagtctccaaatcccgacgcatgggtaaaatctcaataacaaataagtccaacaaaaacataaagaccgacgtcctaatcagagcct 22883950  T
Q  109 aatctaagactccaagaaacgataacggagat 140  Q
    |||||||||||| ||||||||||||| |||||    
T  22883951 aatctaagactctaagaaacgataacagagat 22883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 360
Target Start/End: Original strand, 23879217 - 23879376
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    ||||||||||| |||||| |||||||||||||||| |||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| ||    
T  23879217 cgtctacccattcatacaaataggtaggcggtccaccacaaa-ccactaggggttagcttcacatcaatcataatcaacataaacaaacataagcattca 23879315  T
Q  301 agaatt-catgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||  || ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  23879316 aggctttcatacataacacatatacataaccatccctcctagaatactagcatctcatgat 23879376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 11542086 - 11542199
Alignment:
Q  25 tctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaagactccaag 124  Q
    ||||||| |||||||| ||||| |||||||||| ||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  11542086 tctccaagtcccgacacatgggcaaaatctcaacaaca--taaatccaacaaatacataaataccaacgtcctaatcagagcctaatctaagactccaag 11542183  T
Q  125 aaacgataacggagat 140  Q
    ||||||||||||||||    
T  11542184 aaacgataacggagat 11542199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 360
Target Start/End: Original strand, 24237327 - 24237440
Alignment:
Q  248 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgc-aagaattcatgcataacacatatacataaccatccctcgtagaatac 346  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||| ||||||||| || |||||    
T  24237327 tgggggtaagattcacatcaatcataatcaacataaacaaacataaacattcaaagatttcatgcataacacatatacatacccatccctcctataatac 24237426  T
Q  347 tagcatcacatgat 360  Q
    || |||||||||||    
T  24237427 taacatcacatgat 24237440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 278
Target Start/End: Complemental strand, 22499309 - 22499136
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    ||||||| |||  ||||||||| ||| |||||||||||||||||| |||| |||| |||| | ||| ||||||||| ||||||||||||||| | || ||    
T  22499309 atcagagtctaccctaagactcaaaggaaacgataacggagatagctccctctatccaagcaatcaccaagcaactaaccaaaagcaaactaatcctgca 22499210  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
     |||||||| ||||||||||||| |||||||||||       | | ||||||||||||||||| |||||||||||||||||    
T  22499209 cttcgtcta-ccatccatacagacaggtaggcggt------taaaaccactgggggtaagctttacatcaatcataatcaa 22499136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 18120328 - 18120207
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacatg 298  Q
    ||||||| |||| |||||| |||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||  |||| ||||||||| |||     
T  18120328 tcgtctaaccattcatacaaataggtaggcggtccaccacaga-ccactgggggttagcttcacatcaatcataatcaagaataagcaaacataagcatt 18120230  T
Q  299 caagaattcatgcataacacata 321  Q
    |||| |||| | |||||||||||    
T  18120229 caaggattcttccataacacata 18120207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 99 - 278
Target Start/End: Complemental strand, 24554580 - 24554408
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| |||| | ||| ||||||||||||| ||||| ||||| | || ||    
T  24554580 atcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcacc-aaagc-aactaatcctgca 24554483  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
     |||||||||||||||||||||| ||||| |||||       | | ||||||||||||| ||| |||||||||||||||||    
T  24554482 cttcgtctacccatccatacagaaaggtaagcggt------taaaaccactgggggtaaactttacatcaatcataatcaa 24554408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 360
Target Start/End: Original strand, 23350457 - 23350574
Alignment:
Q  248 tgggggtaagcttcacatcaatcataatcaacat----aaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctcgtaga 342  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||| ||| ||| || |||||| ||||||||||||||||  |||||||| || |    
T  23350457 tgggggtaagcttcacatcaatcataatcaacatatgaaaacaaacataagcattcaaggacttcatggataacacatatacatacacatccctcctaaa 23350556  T
Q  343 atactagcatcacatgat 360  Q
    |||||| |||||||||||    
T  23350557 atactaacatcacatgat 23350574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 646031 - 645975
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  646031 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 645975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 233
Target Start/End: Original strand, 20707956 - 20708089
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||| | ||| ||||||||||||||| || ||||||||| |||  | ||| ||||||||||||||||   |||||| |||| ||    
T  20707956 atcagagcctatcctaagacactaaggaaacgataacggagagagctcccgctatccaaacaatcaccaagcaactcaccaaag--aaactaattctgca 20708053  T
Q  198 gttcgtctacccatccatacagataggtaggcggtc 233  Q
     |||||||||||||||||||||| ||||||||||||    
T  20708054 cttcgtctacccatccatacagacaggtaggcggtc 20708089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 23509007 - 23509063
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23509007 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 23509063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 276
Target Start/End: Original strand, 24906121 - 24906268
Alignment:
Q  124 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 223  Q
    ||||||||||||||||||| ||||||||| |||| | ||  |||||||||||||||| |||||||| | || || ||||||||||||| |||||| | ||    
T  24906121 gaaacgataacggagatagctcccgctatccaagcaatccccaagcaactcaccaaatgcaaactaatcctgcacttcgtctacccattcatacaaacag 24906220  T
Q  224 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatc 276  Q
    |||||||    |||| | | |||||||||||||| || |||||||||| ||||    
T  24906221 gtaggcg----atca-aaaaccactgggggtaagatttacatcaatcagaatc 24906268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 831766 - 831710
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  831766 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgngggtaag 831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 286
Target Start/End: Original strand, 33170419 - 33170600
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    ||||||| |||  ||||||||| ||| |||| |||| |||||||| ||||| ||| |||| | ||| ||||||||||||||||||| || || | || ||    
T  33170419 atcagagtctaccctaagactctaaggaaacaataatggagatagctcccgatatccaagcaatcaccaagcaactcaccaaaagc-aattaatcctgca 33170517  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
     |||||||||||||||||||||| | |||||||||      || | ||||| || |||||||| ||||||||||||||| |||||||||    
T  33170518 cttcgtctacccatccatacagacaagtaggcggt------caaaaccacttggcgtaagctttacatcaatcataatccacataaaca 33170600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 3433779 - 3433723
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  3433779 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 3433723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 17343419 - 17343475
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  17343419 cgtctacccatccatacagataggcaggcggtccattacagatccactgggggtaag 17343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 18610367 - 18610423
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18610367 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 18610423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 24108718 - 24108662
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  24108718 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 24108662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 24931069 - 24931013
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  24931069 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 24931013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 28835919 - 28835975
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  28835919 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 28835975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 41509183 - 41509127
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  41509183 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgagggtaag 41509127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 269890 - 269941
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  269890 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggg 269941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 22008606 - 22008553
Alignment:
Q  203 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaa 256  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  22008606 tctacccatccatacagataggcaggcggtccataacagatccactgggggtaa 22008553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 24719575 - 24719518
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactg-ggggtaag 257  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  24719575 cgtctacccatccatacagataggcaggcggtccatcacagatccactgaggggtaag 24719518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 6776483 - 6776427
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  6776483 cgtctacccatccatatagataggcaggcggtccataacagatccactgggggtaag 6776427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 13664804 - 13664748
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  13664804 cgtctacccatccatacagataggcaagcggtccataacagatccactgggggtaag 13664748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 13724079 - 13724023
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  13724079 cgtctacccatccatacagataggcaagcggtccataacagatccactgggggtaag 13724023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 16043306 - 16043250
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  16043306 cgtctacccatccatacagataggcaggcggtccatcacaaatccactcggggtaag 16043250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 22909596 - 22909540
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  22909596 cgtctacccatccatacagataggcagacggtccataacagatccactgggggtaag 22909540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 16041630 - 16041574
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||    
T  16041630 cgtctacccatccatacagataggcaggcggtccattacatatccacttggggtaag 16041574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 17500109 - 17500181
Alignment:
Q  199 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatca 277  Q
    ||||||||||||||||||||||||||||||||||      || | ||||||||||||||||| ||||||| ||||||||    
T  17500109 ttcgtctacccatccatacagataggtaggcggt------caaaaccactgggggtaagctttacatcaaacataatca 17500181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 18263321 - 18263246
Alignment:
Q  199 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaaca 280  Q
    |||||||||||||||||||||| |||||||||||      || | ||||||||||||||||  |||||||||||||||||||    
T  18263321 ttcgtctacccatccatacagacaggtaggcggt------caaaaccactgggggtaagctatacatcaatcataatcaaca 18263246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 22884069 - 22884111
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  22884069 ccactaggggttagcttcacatcaatcataatcaacataaaca 22884111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 23118789 - 23118675
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    ||||||||||||||||||| ||||| | || || ||||||||| ||||||||| || | |||||||||      || | |||||||||||||  || |||    
T  23118789 caagcaactcaccaaaagc-aactaatcctgcacttcgtctactcatccatacggacaagtaggcggt------caaaaccactgggggtaacttttaca 23118697  T
Q  265 tcaatcataatcaacataaaca 286  Q
    |||||||||||| |||||||||    
T  23118696 tcaatcataatccacataaaca 23118675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 11542327 - 11542368
Alignment:
Q  319 atatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  11542327 atatatataaccatccctcctagaatactagcatcacatgat 11542368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 17264560 - 17264597
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatggg 46  Q
    |||||||||||||||||||||||||||||||| |||||    
T  17264560 acatcatcatataaattctccaaatcccgacaaatggg 17264597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 38531826 - 38531859
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||||||||||||||||||||||||    
T  38531826 tcgtctacccatccatacagataggtaggcggtc 38531859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 23631234 - 23631178
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||| ||||| ||||| ||||  ||||||||||| ||||||||    
T  23631234 cgtctacccatccatacaaataggcaggcgatccaaaacagatccactaggggtaag 23631178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 45561816 - 45561785
Alignment:
Q  9 acatcatcatataaattctccaaatcccgaca 40  Q
    ||||||||||||||||||||||||||||||||    
T  45561816 acatcatcatataaattctccaaatcccgaca 45561785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 15931626 - 15931668
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    ||||||||||||||| | ||||||||||||||| |||||||||    
T  15931626 ccactgggggtaagcattacatcaatcataatccacataaaca 15931668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 23350327 - 23350401
Alignment:
Q  98 aatcagagcctaatctaagactcca-agaaacgataacggagataggtcccgctattcaagtagtcatcaagcaa 171  Q
    |||||||||||| |||||||||| | |||||||||||||||||||| | ||| ||| |||| | ||| |||||||    
T  23350327 aatcagagcctactctaagactcaacagaaacgataacggagatagcttccgttatccaagcactcaccaagcaa 23350401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 17499921 - 17499962
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||||||||||||||||| |||||| ||| |||||||||    
T  17499921 acatcatcatataaattctccgaatcccaacaaatgggtaaa 17499962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 21200064 - 21200031
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  21200064 tcgtctacccatccatacagacaggtaggcggtc 21200031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 23835490 - 23835519
Alignment:
Q  201 cgtctacccatccatacagataggtaggcg 230  Q
    ||||||||||||||||||||||||||||||    
T  23835490 cgtctacccatccatacagataggtaggcg 23835519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 11542213 - 11542273
Alignment:
Q  173 tcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||||||| |  | || || ||||||||||||||| ||| ||||||||||||    
T  11542213 tcaccaaaagcaaactaatcatgcactttgtctacccatccatagagacaggtaggcggtc 11542273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 20655998 - 20655966
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  20655998 cgtctacccatccatacagacaggtaggcggtc 20655966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 21679379 - 21679411
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  21679379 cgtctacccatccatacagacaggtaggcggtc 21679411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 23539254 - 23539302
Alignment:
Q  280 ataaacaaacataaacatgcaagaatt-catgcataacacatatacata 327  Q
    |||| ||||||||||||| |||| ||| |||||||||||||||||||||    
T  23539254 ataatcaaacataaacattcaaggattacatgcataacacatatacata 23539302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 25120690 - 25120722
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  25120690 cgtctacccatccatacagacaggtaggcggtc 25120722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 170; Significance: 4e-91; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 9 - 322
Target Start/End: Original strand, 10349 - 10650
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10349 acatcatcat-taaattctccaaatcccaacatatgggtaaaatctcaataataaataaatccaacaaagacataaagatcaacgtcctaatcagagcct 10447  T
Q  109 aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctac 207  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||| ||||             |||||||||||||| |||| | || || | |||||||    
T  10448 aatctaagactccaagaaacgataacagagattagctcccgctatccaag------------cactcaccaaaagcatactactcctgcactccgtctac 10535  T
Q  208 ccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattc 307  Q
    |||| |||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |||| ||||    
T  10536 ccattcatacaaacaggtaggcggttcatcacagatccactgggggtaagtttcacatcaatcataatcaacataaacaaacataggcattcaaggattc 10635  T
Q  308 atgcataacacatat 322  Q
    |||||||||||||||    
T  10636 atgcataacacatat 10650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 1e-87; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 9 - 360
Target Start/End: Original strand, 8602369 - 8602700
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  8602369 acatcatcatataaattctccaagtcccgacatatgggtaaaatctcaataa-taataaatccgacaaagacataaagaccaacgtcctaatcagagcct 8602467  T
Q  109 -aatctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctac 207  Q
     |||||||||||||||||||||||||||||||||| |||||||||  ||         |||||| |||||  ||||| |||| | || || |||||||||    
T  8602468 aaatctaagactccaagaaacgataacggagatagctcccgctat--aa---------aagcaa-tcacc--aagcagactaatcctgcacttcgtctac 8602553  T
Q  208 ccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattc 307  Q
    ||||||||||||| |||||| ||||      || | ||||||||||||||||| |||||||||||||||||||||||||||||||  ||| |||| ||||    
T  8602554 ccatccatacagacaggtagacggt------caaaaccactgggggtaagctttacatcaatcataatcaacataaacaaacataggcattcaaggattc 8602647  T
Q  308 atgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||| |||||    
T  8602648 atgcatatcacatatacataaccatccctcctaaaatactagcatcatatgat 8602700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 80 - 360
Target Start/End: Complemental strand, 15551920 - 15551649
Alignment:
Q  80 cataaagaccaacgtccta-atcagagcctaa-tctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcacc 177  Q
    ||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||| ||||           |||||||||    
T  15551920 cataaagacaaacatcctagatcagagcctaaatctaagactccaagaaacgataacggagatagctcccggtatccaag-----------caactcacc 15551832  T
Q  178 aaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatca 277  Q
    || | ||| ||| |  | || |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15551831 aacaacaa-ctaatcatacacttcgtctacccatccatacagacaggtaggcggtccatcacagatccacagggggtaagcttcacatcaatcataatca 15551733  T
Q  278 acataaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    |||||||||||||||  ||| ||| || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  15551732 acataaacaaacataggcattcaaggatttcatgcataacacatatacataaccatccctcctagaataataacatcacatgat 15551649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 165 - 360
Target Start/End: Complemental strand, 17760752 - 17760557
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    ||||||||||||||||| ||||||| | || ||   ||||||||||| |||||| |||||||  |||||||||||||||||||| |||||||||||||||    
T  17760752 caagcaactcaccaaaaacaaactaatcctgcacgccgtctacccattcatacaaataggtaaccggtccatcacagatccactaggggtaagcttcaca 17760653  T
Q  265 tcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||||||| ||||||||||  ||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  17760652 tcaatcataatcaacatgaacaaacataggcattcaaggattcatgcatatcacatatacataaccatccctcctagaatactagcatcacatgat 17760557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 165 - 360
Target Start/End: Complemental strand, 19062072 - 19061877
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    ||||||||||||||||| ||||||| | || ||   ||||||||||| |||||| |||||||  |||||||||||||||||||| |||||||||||||||    
T  19062072 caagcaactcaccaaaaacaaactaatcctgcacgccgtctacccattcatacaaataggtaaccggtccatcacagatccactaggggtaagcttcaca 19061973  T
Q  265 tcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||||||| ||||||||||  ||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  19061972 tcaatcataatcaacatgaacaaacataggcattcaaggattcatgcatatcacatatacataaccatccctcctagaatactagcatcacatgat 19061877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 9 - 360
Target Start/End: Complemental strand, 37918990 - 37918661
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||    
T  37918990 acatcatcataaaaattctccaagtcccgacatatgagtaaaatctcaataataaataaatttaacaaagacataaagaccaacgtcctgatcagagcct 37918891  T
Q  109 -aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaac-tagttcttcagttcgtct 205  Q
     |||||| |||||||||||||||||||||||| ||| ||||||                     ||||||||||||||||| || | || || ||||| |    
T  37918890 aaatctaggactccaagaaacgataacggagattagctcccgc---------------------actcaccaaaagcaaacatattcctgcacttcgttt 37918812  T
Q  206 acccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaaca-tgcaagaa 304  Q
    |||||| |||||| |  ||||||||||| |      | ||||||||||||||||| |||||||||||||||||||||||||||||||| || | ||| ||    
T  37918811 acccattcatacaaactggtaggcggtcga------aaccactgggggtaagctttacatcaatcataatcaacataaacaaacataagcatttcaataa 37918718  T
Q  305 -ttcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
     ||||||||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  37918717 tttcatgcataacacatatacataaccatccctcctaaaataccagcatcacatgat 37918661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 9 - 287
Target Start/End: Original strand, 10902543 - 10902805
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | | |||| ||    
T  10902543 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagatcaacgtcccagttagagtct 10902642  T
Q  109 -aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtcta 206  Q
     ||||||||||| ||||||||||||||||||| ||| ||||||||| ||||             ||||||||||||||||||| | || || | ||||||    
T  10902643 aaatctaagacttcaagaaacgataacggagattagctcccgctatccaag------------cactcaccaaaagcaaactactcctgcattccgtcta 10902730  T
Q  207 cccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    ||||| |||||| | |||||||||||      || | ||||||||||||||||||| ||||||||||||||||||||||||    
T  10902731 cccattcatacaaacaggtaggcggt------caaaaccactgggggtaagcttcatatcaatcataatcaacataaacaa 10902805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 125 - 348
Target Start/End: Original strand, 15988721 - 15988938
Alignment:
Q  125 aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatagg 224  Q
    |||||||||||||||||| |||| |||| |||| | ||| |||| |||||||| ||||||||||| | || || ||||||||||||| |||||| | |||    
T  15988721 aaacgataacggagatagctcccactatccaagcaatcaccaagaaactcaccgaaagcaaactaatcctgcacttcgtctacccattcatacaaacagg 15988820  T
Q  225 taggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatac 324  Q
    ||||||||| |      | ||||||||||||||||| |||||||||||||||||||||| |||| |||||||| |||| |||||||||||||||||||||    
T  15988821 taggcggtcaa------aaccactgggggtaagctttacatcaatcataatcaacataagcaaatataaacattcaaggattcatgcataacacatatac 15988914  T
Q  325 ataaccatccctcgtagaatacta 348  Q
    ||||||||||||| ||||||||||    
T  15988915 ataaccatccctcctagaatacta 15988938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 248 - 360
Target Start/End: Complemental strand, 31414511 - 31414399
Alignment:
Q  248 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtagaatact 347  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31414511 tgggggtaagctttacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtagaatact 31414412  T
Q  348 agcatcacatgat 360  Q
    |||||||||||||    
T  31414411 agcatcacatgat 31414399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 201 - 360
Target Start/End: Complemental strand, 6817546 - 6817387
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    ||||||||||| |||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||  ||| ||    
T  6817546 cgtctacccattcatacaaacaggtaggcggtccatcaaagatccactaggggtaagcttcacatcaatcataatcaacataaataaacataggcattca 6817447  T
Q  301 agaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || ||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  6817446 aggatttatgcatagcacatatacataaccatccctcctagaatactagcatcacatgat 6817387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 201 - 360
Target Start/End: Complemental strand, 38813318 - 38813159
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    ||||||||||| |||||||| |||||||| |||||||| ||||||||| ||||||||  | ||||||||||||||||||||||||||| |||| ||| ||    
T  38813318 cgtctacccatacatacagacaggtaggcagtccatcatagatccactaggggtaagtattacatcaatcataatcaacataaacaaatataagcattca 38813219  T
Q  301 agaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38813218 aggattcatgcataacacatatacataaccatccctcctagaatactagcatcacatgat 38813159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 33 - 360
Target Start/End: Complemental strand, 38378342 - 38378035
Alignment:
Q  33 tcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aatctaagactccaagaaacgat 131  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  38378342 tcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaaatctaggactccaagaaacgat 38378243  T
Q  132 aacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcg 230  Q
    |||||||| ||| ||||||||| ||||             ||||||||||||| ||| | | || || | ||||||| ||| |||||| |  ||||||||    
T  38378242 aacggagattagctcccgctatccaag------------cactcaccaaaagctaaccactcctgcactccgtctactcattcatacaaacgggtaggcg 38378155  T
Q  231 gtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaattcatgcataacacatatacataac 329  Q
    ||      || | ||||||||| ||||||     || |||||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||||     
T  38378154 gt------caaaaccactggggataagct-----tctatcataatcaacataaacaaacataagcattcaaggatttcatgcataacacatatacataaa 38378066  T
Q  330 catccctcgtagaatactagcatcacatgat 360  Q
    |||||||| || ||||||| ||| |||||||    
T  38378065 catccctcctacaatactaacatgacatgat 38378035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 205 - 356
Target Start/End: Original strand, 12950836 - 12950987
Alignment:
Q  205 tacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaa 304  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||| |||| ||| |||| |    
T  12950836 tacccatctatacagacaggtaggcggtccatcacagatccactgggggtaagtattacatcaatcataatcaacataaacaaatataagcattcaagga 12950935  T
Q  305 ttcatgcataacacatatacataaccatccctcgtagaatactagcatcaca 356  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||||||    
T  12950936 ttcatgcataacccatatacataaccatccatcctagaatactagcatcaca 12950987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 333
Target Start/End: Complemental strand, 40041666 - 40041355
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    |||| |||| ||||||||||||| ||| ||||||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |    
T  40041666 acattatcacataaattctccaagtcctgacatatgaataaaatctcaataataaataaatccaacaaagacaaaaagaccaacgtcctaatcagagcat 40041567  T
Q  109 -aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtcta 206  Q
     |||||| |||||||||||||||||||| ||| ||| ||| ||||||||||             ||||||||||| ||||||| | || || |  |||||    
T  40041566 aaatctaggactccaagaaacgataacgaagattagctcctgctattcaag------------cactcaccaaaaacaaactactcctgcactcggtcta 40041479  T
Q  207 cccatccatacagataggtaggcggtccatcacagatccact-gggggtaagcttcacatcaatcataatcaacataaacaaacataaaca-tgcaa-ga 303  Q
    ||||| |||||| | | |||||||      | || | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||    
T  40041478 cccattcatacaaacaagtaggcg------ctcaaaaccactggggggtaagcttcacatcaatcataatcaacataaacaaacataaacatttcaagga 40041385  T
Q  304 attcatgcataacacatatacataaccatc 333  Q
     ||||||||||||||| |||||||||||||    
T  40041384 tttcatgcataacacacatacataaccatc 40041355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 360
Target Start/End: Complemental strand, 14182416 - 14182155
Alignment:
Q  95 cctaatcagagcctaatctaagactccaagaaacgataacggagat-aggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttc 193  Q
    |||||||||||||||||||||||||| ||  | ||||||||||||| || ||| ||||| |||| | ||| ||||||||||||| |||| ||||||   |    
T  14182416 cctaatcagagcctaatctaagactctaaacaccgataacggagattagctcctgctatccaagcaatcaccaagcaactcaccgaaaggaaactaaccc 14182317  T
Q  194 ttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataa 293  Q
    |  | ||||||||||||| |||||| | || ||||||||| |      | ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  14182316 tatacttcgtctacccattcatacaaacagataggcggtcaa------aaccattgggggttagcttcacatcaatcataatcaacataaacaaacataa 14182223  T
Q  294 acatgcaa-gaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
     ||| ||| || |||||||||||||||||||||||  |||||||| |||||||||| |||||||||||    
T  14182222 gcattcaaggatttcatgcataacacatatacatactcatccctcctagaatactaacatcacatgat 14182155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 25106211 - 25106101
Alignment:
Q  250 ggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtagaatactag 349  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||| |||||||||||    
T  25106211 ggggtaagcttcacatcaatcataatcaacataaacaaatataagcattcaaggattcatgcataacacatatacataatcatccctcctagaatactag 25106112  T
Q  350 catcacatgat 360  Q
    |||||||||||    
T  25106111 catcacatgat 25106101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 319
Target Start/End: Complemental strand, 5230616 - 5230400
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| ||||||||| |||||||| ||||| ||| |||| | ||||||||| ||||||||||||||||||| | || ||    
T  5230616 atcagagcctaccctaagactcaaaggaaacgataatggagatagctcccgttatccaagcaatcatcaagccactcaccaaaagcaaactaatcctgca 5230517  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacat 297  Q
     || |||||||| |||||||| | |||||||||||      || | |||||  |||||| ||| |||||||||||||||||||||||||||||||| |||    
T  5230516 ctttgtctacccttccatacaaacaggtaggcggt------caaaaccactacgggtaaactttacatcaatcataatcaacataaacaaacataagcat 5230423  T
Q  298 gcaa-gaattcatgcataacaca 319  Q
     ||| || ||||||||| |||||    
T  5230422 tcaaggatttcatgcatcacaca 5230400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 360
Target Start/End: Original strand, 17391285 - 17391402
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctcgtaga 342  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| || |||||||||||||||||||||||  ||||| || ||||    
T  17391285 ccactaggggtaagcttcacatcaatcataatcaacattaacaaacataagcattcaaggatttcatgcataacacatatacatactcatccttcctaga 17391384  T
Q  343 atactagcatcacatgat 360  Q
    |||||| |||||||||||    
T  17391385 atactaacatcacatgat 17391402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 20419021 - 20419145
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacatgc 299  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||||| ||| || ||||||||||| |||||||||| || |||||| |||||||||      
T  20419021 cgtctacccattcatacaaataggtaggcggtccaccacaga-ccactagggcta-gcttcacatca-tcataatcaaacacaaacaatcataaacattt 20419117  T
Q  300 aagaattcatgcataacacatatacata 327  Q
    ||| ||||||||||||||||||||||||    
T  20419118 aaggattcatgcataacacatatacata 20419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 280
Target Start/End: Complemental strand, 43429543 - 43429368
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| |||| ||||||||||||  ||||| ||| |||| | ||| ||||||||||||||||||| ||||| | ||  |    
T  43429543 atcagagcctaccctaagactctaaggaaacaataacggagatatctcccgatatccaagcaatcaccaagcaactcaccaaaagc-aactaatcctgta 43429445  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaaca 280  Q
     |||||||||||||| ||||||| |||||| ||||      || | ||||||||||||||||| |||||||||||||||||||    
T  43429444 cttcgtctacccatctatacagacaggtagacggt------caaaaccactgggggtaagctttacatcaatcataatcaaca 43429368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 8687932 - 8688002
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaaga 79  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  8687932 acatcatgatataaaatctccaaatcccgacatatgggtcaaatctcaaaaacaaataaatccaacaaaga 8688002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 9039801 - 9039871
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaaga 79  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  9039801 acatcatgatataaaatctccaaatcccgacatatgggtcaaatctcaaaaacaaataaatccaacaaaga 9039871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 17936394 - 17936475
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 283  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||    
T  17936394 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaagtattacatc-atcataatccacataa 17936475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 6230637 - 6230494
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||||||||||| ||||||||| |||| |  || |||||||||||||||| |||| |||   || || |||||||||||||||||||||| |||||    
T  6230637 acgataacggagatagctcccgctatccaagcaaccagcaagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctacccatccatacagacaggta 6230540  T
Q  227 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||||      || | ||||||||||||||||| |||||||||||||||||    
T  6230539 ggcggt------caaaaccactgggggtaagctttacatcaatcataatcaa 6230494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 7851623 - 7851678
Alignment:
Q  202 gtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7851623 gtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 7851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 278
Target Start/End: Complemental strand, 17320583 - 17320410
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||| ||||| ||| |||||| ||||||||||| ||||  ||| |||| | ||||||||||||| | ||||| ||| ||| | || ||    
T  17320583 atcagagcctaccctaggactctaaggaaacgacaacggagatagctcccaatatccaagcaatcatcaagcaacttatcaaaaacaa-ctaatcctgca 17320485  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
     |||||||||||||||||||||| |||||||||||      || | ||||||||| ||||||| |||||||||||||||||    
T  17320484 cttcgtctacccatccatacagacaggtaggcggt------caaaaccactggggttaagctttacatcaatcataatcaa 17320410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 12796662 - 12796718
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  12796662 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 12796718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 14819824 - 14819681
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||||||||||| ||||||||| |||| | ||| |||||||||||||||| |||| |||   || || ||||||||| |||||||||||| |||||    
T  14819824 acgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctactcatccatacagacaggta 14819727  T
Q  227 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||||      || | ||||||| ||||||||| |||||||||||||||||    
T  14819726 ggcggt------caaaaccactggaggtaagctttacatcaatcataatcaa 14819681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 16818982 - 16819038
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16818982 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 16819038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 18908618 - 18908674
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18908618 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 18908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 22272973 - 22273029
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  22272973 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 22273029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 12490733 - 12490652
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 283  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||    
T  12490733 cgtctacccatccatacaaacaggtaggtggtccatcacagatccactgggggtaagtattacatc-atcataatccacataa 12490652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 51160394 - 51160340
Alignment:
Q  203 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  51160394 tctacccatccatacagataggcaggcggtccatcacagatccacttggggtaag 51160340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 19944744 - 19944800
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  19944744 cgtctacccatccatacagataggcaggcggtccatcacatatccactaggggtaag 19944800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 286
Target Start/End: Original strand, 41659870 - 41659951
Alignment:
Q  199 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    |||||||||||||||||||||| |||||||||||| |      | ||||||||||||||||| ||||||||||||||| |||||||||    
T  41659870 ttcgtctacccatccatacagacaggtaggcggtcaa------aaccactgggggtaagctttacatcaatcataatccacataaaca 41659951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 48419905 - 48419956
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  48419905 cgtctacccatccatacagacaggtaggcggtccatcacagatccattgggg 48419956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 30140925 - 30140979
Alignment:
Q  203 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  30140925 tctacccatccatacagataggcaggcggtccataacagatccactgggtgtaag 30140979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 293964 - 294017
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca 62  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  293964 acatcaccatataaaatctccaaatcccgacatatgggtaaaatctcaacaaca 294017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 11812740 - 11812796
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  11812740 cgtctactcatccatacagataggcaggcggtccataacagatccactaggggtaag 11812796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 9304939 - 9304888
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  9304939 cgtctacccatccgtacagataggcaggcggtccataacagatccactgggg 9304888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 11381033 - 11381102
Alignment:
Q  213 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 283  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||  | ||||| ||||||||| ||||||    
T  11381033 catacagacaggtaggcggtccatcacagatccactggaggtaagtattacatc-atcataatccacataa 11381102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 20418832 - 20418978
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtccta-atcagagc 106  Q
    |||||| || ||||| |||||||||||||||||||||||| |||||||| |||| ||| ||||||| | | |  |||||||| ||  |||| ||||||||    
T  20418832 acatcaccacataaaatctccaaatcccgacatatgggtagaatctcaacaacataatcaatccaaaataaaagtaaagaccgacaccctacatcagagc 20418931  T
Q  107 c-taatctaagactccaagaaacgataacggagataggtcccgctat 152  Q
    | ||  |||||||||||| ||  |||||||||| ||| |||||||||    
T  20418932 catatactaagactccaaaaacagataacggaggtagctcccgctat 20418978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 33339977 - 33340033
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||||||| ||||||    
T  33339977 cgtctacccatccatacagataggcaggaggttcatcacatatccactggaggtaag 33340033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 38166151 - 38166203
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactggggg 253  Q
    ||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||    
T  38166151 cgtctacacatccatacagataggcaggcggtccataacaaatccactggggg 38166203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 4147671 - 4147567
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||||||||||| |||||||||  ||| |  || |||||||||||||||| |||| |||   || || |||||||||||||||||| ||| |||||    
T  4147671 acgataacggagatagctcccgctatctaagcaaccaccaagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctacccatccatatagacaggta 4147574  T
Q  227 ggcggtc 233  Q
    |||||||    
T  4147573 ggcggtc 4147567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 4164223 - 4164119
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||||||||||| |||| |||| |||| |  || |||||||||||||||| |||| |||    | || |||||||||||||||||||||| |||||    
T  4164223 acgataacggagatagttcccactatccaagcaaccaccaagcaactcaccaaa-gcaa-ctaaccttgcacttcgtctacccatccatacagacaggta 4164126  T
Q  227 ggcggtc 233  Q
    |||||||    
T  4164125 ggcggtc 4164119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 5230388 - 5230343
Alignment:
Q  315 acacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||    
T  5230388 acacatatatataaccatcccttctagaatactagcatcacatgat 5230343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 6817743 - 6817706
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatggg 46  Q
    |||||||||||||||||||||||||||||||| |||||    
T  6817743 acatcatcatataaattctccaaatcccgacaaatggg 6817706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 21168814 - 21168773
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  21168814 acatcatcataaaaattctccaaatcccgacaaatgggtaaa 21168773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 22637393 - 22637434
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  22637393 acatcatcataaaaattctccaaatcccgacaaatgggtaaa 22637434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 41659679 - 41659720
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  41659679 acatcatcataaaaattctccaaatcccgacaaatgggtaaa 41659720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 54045765 - 54045708
Alignment:
Q  201 cgtctacccatccatacagataggtaggc-ggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| || | ||||||||||| ||||||| ||||||||    
T  54045765 cgtctacccatccatacagataggcagacgggtccatcacatatccactaggggtaag 54045708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 14968127 - 14968167
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaa 284  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  14968127 ccactgggggttagtttcacatcaatcataatcaacataaa 14968167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 40937888 - 40937920
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||||||||||||||||    
T  40937888 cgtctacccatccatacagataggtaggcggtc 40937920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 232
Target Start/End: Original strand, 23490714 - 23490745
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggt 232  Q
    ||||||||||||||||||||||||||||||||    
T  23490714 cgtctacccatccatacagataggtaggcggt 23490745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 5230722 - 5230677
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctc 55  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||    
T  5230722 acatcatcatataaaatctccaaatcccgacaaatgggt-aaatctc 5230677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 11636812 - 11636846
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||||||||||||||| |||||||||||||||||    
T  11636812 ccactgggggtaagctttacatcaatcataatcaa 11636846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 11517324 - 11517291
Alignment:
Q  250 ggggtaagcttcacatcaatcataatcaacataa 283  Q
    ||||| ||||||||||||||||||||||||||||    
T  11517324 ggggttagcttcacatcaatcataatcaacataa 11517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 12950634 - 12950663
Alignment:
Q  9 acatcatcatataaattctccaaatcccga 38  Q
    ||||||||||||||||||||||||||||||    
T  12950634 acatcatcatataaattctccaaatcccga 12950663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 15552006 - 15551969
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatggg 46  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  15552006 acatcatcatataaattctctaaatcccgacaaatggg 15551969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 6148778 - 6148746
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  6148778 cgtctacccatccatacagacaggtaggcggtc 6148746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 11330895 - 11330863
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  11330895 cgtctacccatccatacagacaggtaggcggtc 11330863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 11884138 - 11884106
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  11884138 cgtctacccatccatacagacaggtaggcggtc 11884106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 12563452 - 12563420
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  12563452 cgtctacccatccatacagacaggtaggcggtc 12563420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 14296675 - 14296707
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  14296675 cgtctacccatccatacagacaggtaggcggtc 14296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 14302302 - 14302334
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  14302302 cgtctacccatccatacagacaggtaggcggtc 14302334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 15548773 - 15548805
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  15548773 cgtctacccatccatacagacaggtaggcggtc 15548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 17098858 - 17098890
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  17098858 cgtctacccatccatacagacaggtaggcggtc 17098890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 25769479 - 25769511
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  25769479 cgtctacccatccatacagacaggtaggcggtc 25769511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 35121866 - 35121898
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  35121866 cgtctacccatccatacagacaggtaggcggtc 35121898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 39654108 - 39654140
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  39654108 cgtctacccatccatacagacaggtaggcggtc 39654140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 47786790 - 47786758
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  47786790 cgtctacccatccatacagacaggtaggcggtc 47786758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 53900517 - 53900485
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  53900517 cgtctacccatccatacagacaggtaggcggtc 53900485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 5e-84; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 9 - 360
Target Start/End: Original strand, 20191813 - 20192148
Alignment:
Q  9 acatcatcatataaattctccaaatcccgaca-tatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcc 107  Q
    |||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  20191813 acatcatcatataagttctccaagtcccgacaatatgggtaaaatctcaataataaataaattcaacaaagacataaagaccaacgtcctaatcagagcc 20191912  T
Q  108 taatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtcta 206  Q
    |||||||||||||||| ||||||||| ||||| ||| ||||||||| ||||             |||||| |||||||||||| | || || | ||||||    
T  20191913 taatctaagactccaataaacgataatggagattagctcccgctatccaag------------cactcacaaaaagcaaactactcctacactccgtcta 20192000  T
Q  207 cccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaatt 306  Q
    ||||| |||||| | |||||||||||| |      | ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||  |||    
T  20192001 cccattcatacaaacaggtaggcggtcga------aaccactgggggtaagcttcacatcaatcatgatcaacataaacaaatataagcattcaaagatt 20192094  T
Q  307 catgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  20192095 catgcataacacatatacataaccattcctcctagaatactaacatcacatgat 20192148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 9 - 348
Target Start/End: Complemental strand, 78601 - 78277
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    |||||||||| |||||||||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  78601 acatcatcatgtaaattctccaaatcttgacatgtgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 78502  T
Q  109 aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctac 207  Q
    |||||||||| |||||||||||||||||||| ||  | |||||||            |||||||||||||||||||||||||||  | || |||||||||    
T  78501 aatctaagaccccaagaaacgataacggagattatcttccgctat-----------ccaagcaactcaccaaaagcaaactagtcatgcacttcgtctac 78413  T
Q  208 ccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaatt 306  Q
    ||||||||||||| |||||||||| | |      |  |||| ||| ||| ||| |||||||||||||||||||||||||||||||| ||| ||| || ||    
T  78412 ccatccatacagacaggtaggcggccga------aaacactagggataaactttacatcaatcataatcaacataaacaaacataagcattcaaggattt 78319  T
Q  307 catgcataacacatatacataaccatccctcgtagaatacta 348  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  78318 catgcataacatatatacataaccatccctcctagaatacta 78277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 287
Target Start/End: Original strand, 25092923 - 25093186
Alignment:
Q  9 acatcatcatataaattctccaaatcccgaca-tatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcc 107  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  25092923 acatcatcatataaattctccaaatcccgacaatatgggtaaattctcaataataaataaatccaacaaagacataatgaccaacgtcctagtcagagcc 25093022  T
Q  108 t-aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtct 205  Q
    | ||||||||||||||||||| ||||||||||| ||| ||||||||| ||||             ||||||||||||||||||| | || || | |||||    
T  25093023 taaatctaagactccaagaaatgataacggagattagctcccgctatccaag------------cactcaccaaaagcaaactactcctgcactccgtct 25093110  T
Q  206 acccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    | |||| |||||| | |||| ||||||      || | ||||| ||||||||||||||||||||||||||||||||||||||    
T  25093111 atccattcatacaaacaggttggcggt------caaaaccactaggggtaagcttcacatcaatcataatcaacataaacaa 25093186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 360
Target Start/End: Original strand, 20820501 - 20820842
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca--aataaatccaacaaagacataaagaccaacgtccta-atcagag 105  Q
    ||||||||||||||| |||| |||||||||||||| || |||||||||| ||||  || ||||| |  | |  ||||||||   || ||||| |||||||    
T  20820501 acatcatcatataaaatctctaaatcccgacatattggcaaaatctcaacaacataaacaaatctagaataatcataaagatagacatcctagatcagag 20820600  T
Q  106 cctaatctaagactccaag--aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgt 203  Q
    ||||  ||||||||| ||   |||||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||| ||||||| |||| || |||||    
T  20820601 cctatcctaagactcaaaagaaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccaaaaacaaactaattctgcacttcgt 20820700  T
Q  204 ctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaaga 303  Q
    | ||||||  ||||| | |||||||||||      || | ||||| ||||| |||||||||||||||||||||||||||||||  ||         | ||    
T  20820701 caacccatttatacaaacaggtaggcggt------caaaaccactaggggttagcttcacatcaatcataatcaacataaacattca---------agga 20820785  T
Q  304 attcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
     ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  20820786 tttcatgcataacacatatacatacccatccctcctagaatactaacatcacatgat 20820842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 244 - 360
Target Start/End: Original strand, 33395168 - 33395285
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgc-aagaattcatgcataacacatatacataaccatccctcgtaga 342  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| | |||| |||||||||||||||| || ||||||||||||| ||||    
T  33395168 ccactgggggtaagctttacatcaatcataatcaacataaacaaacataagcattcaaagatttcatgcataacacatgtatataaccatccctcctaga 33395267  T
Q  343 atactagcatcacatgat 360  Q
    ||||||||||||||||||    
T  33395268 atactagcatcacatgat 33395285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 33384091 - 33384220
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| ||||  ||||||||||||||||||||||||||||||||  | ||    
T  33384091 atcagagcctaccctaagactctaaggaaacgataacggagatagctcccgctatccaagcggtcatcaagcaactcaccaaaagcaaactagtcttgca 33384190  T
Q  198 gttcgtctacccatccatacagataggtag 227  Q
     |||||||||||||||||||||| ||||||    
T  33384191 cttcgtctacccatccatacagacaggtag 33384220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 99 - 278
Target Start/End: Complemental strand, 40438295 - 40438121
Alignment:
Q  99 atcagagcctaatctaagactccaagaaa-cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| |||||| ||||||||||||||| ||||||||| |||  | ||| ||||||||||||||||||||||||| |  | ||    
T  40438295 atcagagcctaccctaagactctaagaaaacgataacggagatagctcccgctatccaaacaatcaccaagcaactcaccaaaagcaaactaatcatgca 40438196  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
     | ||||||||||||||||| || |||||||||||       | | ||||||||||||||||| |||||||||||||||||    
T  40438195 ctccgtctacccatccatacggacaggtaggcggt------taaaaccactgggggtaagctttacatcaatcataatcaa 40438121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 52397854 - 52397997
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||| ||||||| ||||||||| |||| |  || |||||||||||||||||   |||||  ||| || |||||||||||||||||||||| ||||     
T  52397854 acgataacagagatagctcccgctatccaagcaaccaccaagcaactcaccaaaa--caactaactctgcatttcgtctacccatccatacagacaggtc 52397951  T
Q  227 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||||      || | ||||||||||||||||| |||||||||||||||||    
T  52397952 ggcggt------caaaaccactgggggtaagctttacatcaatcataatcaa 52397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 20252281 - 20252337
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  20252281 cgtctacccatccatacagataggcaggcggtccatcacagatctactgggggtaag 20252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 22080129 - 22080185
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  22080129 cgtctacccatccatacagaaaggtaggcggtccatcacagatccactgggcgtaag 22080185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 22352224 - 22352280
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  22352224 cgtctatccatccatacagaaaggtaggcggtccatcacagatccactggggctaag 22352280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 41217482 - 41217529
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccact 248  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  41217482 cgtctacccatccatacagacaggtaggcggtccatcacagatccact 41217529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 40555631 - 40555713
Alignment:
Q  199 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    |||||||||||||||||||||| |||||||||||| |      | ||||| ||||||||||| ||||||||||||||| ||||||||||    
T  40555631 ttcgtctacccatccatacagacaggtaggcggtcaa------aaccactaggggtaagctttacatcaatcataatccacataaacaa 40555713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 22364882 - 22364938
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||    
T  22364882 cgtctacccattcatacagataggcagacggtccatcacatatccactgggggtaag 22364938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 5472502 - 5472461
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  5472502 acatcatcatataaattctccaaatcccgacaaatgggtaaa 5472461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 21041856 - 21041897
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  21041856 acatcatcatataaattctccaaatcccgacaaatgggtaaa 21041897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 24498501 - 24498444
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagc 258  Q
    ||||||| || |||||||| || ||||||||||||| |||||||||||||||||||||    
T  24498501 cgtctactcacccatacaggtaagtaggcggtccataacagatccactgggggtaagc 24498444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 286
Target Start/End: Complemental strand, 41213576 - 41213496
Alignment:
Q  199 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    |||||||||||||||||||||| ||||||||||||||      | ||||| ||||||||||| ||||||||||||||| | |||||||    
T  41213576 ttcgtctacccatccatacagacaggtaggcggtcca------aaccact-ggggtaagctttacatcaatcataatccagataaaca 41213496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 21193427 - 21193505
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    ||||||||||||||| ||||||||||||||||| |      | |||||||| |||||||| ||||||||||||||| |||||||||    
T  21193427 cgtctacccatccat-cagataggtaggcggtcaa------aaccactgggagtaagctttacatcaatcataatccacataaaca 21193505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 46144067 - 46144101
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||||||||||||||||||    
T  46144067 ccactgggggtaagcttcacatcaatcataatcaa 46144101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 5472301 - 5472220
Alignment:
Q  199 ttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    |||||||| ||||||||||||| |||||||||||| |      | ||||||||| ||||||| ||||||||||||||| ||||||||||    
T  5472301 ttcgtctatccatccatacagacaggtaggcggtcaa------aaccactgggg-taagctttacatcaatcataatccacataaacaa 5472220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 15863569 - 15863513
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| || ||||||||  | ||||||||||||| ||||||||||||||||||||    
T  15863569 cgtctactcacccatacaggcaagtaggcggtccataacagatccactgggggtaag 15863513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 41213769 - 41213705
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataac--aaataaatcca 72  Q
    ||||||||||| |||||||||||||||||||| |||||  ||||||| |||||  |||||||||||    
T  41213769 acatcatcataaaaattctccaaatcccgacaaatggg-caaatctccataacataaataaatcca 41213705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 5770145 - 5770042
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    |||||||||||||||| |||| ||| | || || |||||||||||||||||||||| ||||||| |||      || | ||||| ||||||||||| |||    
T  5770145 caagcaactcaccaaa-gcaa-ctaatcctgcacttcgtctacccatccatacagacaggtaggtggt------caaaaccact-ggggtaagctttaca 5770055  T
Q  265 tcaatcataatca 277  Q
    |||||||||||||    
T  5770054 tcaatcataatca 5770042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 5770302 - 5770265
Alignment:
Q  13 catcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  5770302 catcataaaaattctccaaatcccgacaaatgggtaaa 5770265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 15807080 - 15806999
Alignment:
Q  279 cataaacaaacataaacatgcaagaatt-catgcataacacatatacataaccatccctcgtagaatactagcatcacatga 359  Q
    ||||| ||||||||| ||| |||| ||| |||||||||||||||||||||  |||| ||  ||||| |||| ||||||||||    
T  15807080 cataatcaaacataagcattcaaggatttcatgcataacacatatacatattcatcactactagaaaactaacatcacatga 15806999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 18164438 - 18164471
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  18164438 tcgtctacccatccatacagacaggtaggcggtc 18164471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 9786369 - 9786337
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  9786369 cgtctacccatccatacagacaggtaggcggtc 9786337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 21042023 - 21042082
Alignment:
Q  173 tcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||| ||| | || || ||||| |||||||||||||||| ||||||||||||    
T  21042023 tcaccaaaagcaa-ctaatcctgcacttcgtttacccatccatacagacaggtaggcggtc 21042082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 22148296 - 22148264
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  22148296 cgtctacccatccatacagacaggtaggcggtc 22148264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 35053086 - 35053118
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  35053086 cgtctacccatccatacagacaggtaggcggtc 35053118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 36358229 - 36358197
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  36358229 cgtctacccatccatacagacaggtaggcggtc 36358197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 51658311 - 51658279
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  51658311 cgtctacccatccatacagacaggtaggcggtc 51658279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 146; Significance: 8e-77; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 9 - 354
Target Start/End: Complemental strand, 23218 - 22897
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  23218 acatcatcatataaattctccaaattctgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgttctaatcaaagcct 23119  T
Q  109 -aatctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctac 207  Q
     ||| ||||||||||| ||||||||| |||||||| ||||||||| |||| | ||| ||||||||||||                   || |||||||||    
T  23118 aaatttaagactccaaaaaacgataatggagatagctcccgctatccaagcaatcaccaagcaactcac-------------------cacttcgtctac 23038  T
Q  208 ccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattc 307  Q
    |||| |||||||| | |||||||||      || | ||||||||||||||||| |||||||||||||||||||||||||||||||  ||| |||| ||||    
T  23037 ccattcatacagacatgtaggcggt------caaaaccactgggggtaagctttacatcaatcataatcaacataaacaaacatatgcattcaaggattc 22944  T
Q  308 atgcataacacatatacataaccatccctcgtagaatactagcatca 354  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  22943 atgcatagcacatatacataaccatctctcctagaatactagcatca 22897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 7e-74; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 9 - 360
Target Start/End: Original strand, 18533422 - 18533757
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |||||||| |||| |||||||||| |||||||| |||||||||||||    
T  18533422 acatcatcatataaattcttcaagtcccaacatatgggtaaaatctcaataataaataaattcaacgaagacataaataccaacgttctaatcagagcct 18533521  T
Q  109 aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctac 207  Q
    |||||||||||||||||| |||||||||||| ||  ||||||||| ||||       |||     |||||||||||||| || | || || |  ||||||    
T  18533522 aatctaagactccaagaaccgataacggagattaactcccgctatccaag-------caa-----tcaccaaaagcaaaatactcctgcactctgtctac 18533609  T
Q  208 ccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaatt 306  Q
    |||| |||||| | |||||||||||       | | |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| || ||    
T  18533610 ccattcatacaaacaggtaggcggt------taaaaccactgggggtaagcttcacatcaatcataatcaacataatcaaacataagcattcaaggattt 18533703  T
Q  307 catgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  18533704 catgcataacacatatacatacccatccctcctagaatactaacatcacatgat 18533757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 9 - 287
Target Start/End: Original strand, 25593236 - 25593498
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  25593236 acatcatcacataaattctccaagtcccgacatataggtaaaatctcaataataaataaatccaacaaagacataaagaccaatgtcctaatcagagcct 25593335  T
Q  109 -aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtcta 206  Q
     |||||| ||||||||||||||||||| |||| ||| ||| ||||| ||||             ||||||||||||||||||| | || || | ||||||    
T  25593336 aaatctaggactccaagaaacgataacagagattagctcctgctatccaag------------cactcaccaaaagcaaactactcctacactccgtcta 25593423  T
Q  207 cccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    ||||| |||||| | |||||||||||      || | ||||||||||||||||||||||||||||||||||||||||||||    
T  25593424 cccattcatacaaacaggtaggcggt------caaaaccactgggggtaagcttcacatcaatcataatcaacataaacaa 25593498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 95 - 360
Target Start/End: Original strand, 29111926 - 29112186
Alignment:
Q  95 cctaatcagagcctaatctaagactccaagaaacgataacggagat-aggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttc 193  Q
    ||||||||||||||||||||||| || || || ||||||||||||| || ||| ||||| |||  | ||| ||||||||||||| ||||||||||| |      
T  29111926 cctaatcagagcctaatctaagattctaaaaaccgataacggagattagctccagctatccaaacaatcaccaagcaactcaccgaaagcaaactaatca 29112025  T
Q  194 ttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataa 293  Q
    | || ||||||||| ||| |||||| | ||| |||| ||| |      | |||||||||||||||||||||||||||| ||||||||||||||||||||     
T  29112026 tgcacttcgtctacgcattcatacaaacaggcaggctgtcaa------aaccactgggggtaagcttcacatcaatcacaatcaacataaacaaacatag 29112119  T
Q  294 acatgcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    |||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29112120 acattcaacgattcatgcataacacatatacataaccatccctcctagaatactagcatcacatgat 29112186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 115 - 360
Target Start/End: Original strand, 43640530 - 43640773
Alignment:
Q  115 agactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 214  Q
    |||||| |||| |||||| || |||||| ||||||||| |||| |  || | |||||||||||||| |||| ||| | || ||   ||||||||||||||    
T  43640530 agactctaagacacgatagcgaagatagctcccgctatccaagcaaccaccgagcaactcaccaaa-gcaa-ctaatcctgcacaacgtctacccatcca 43640627  T
Q  215 tacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatc---aacataaacaaacataaacatgcaagaattcatgc 311  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||   || |||||||||||||  ||| |||| ||||||||    
T  43640628 tacagataggtaggcggtccatcacagatccact--gggtaagcttcacatcaatcataatcaataaaataaacaaacataggcattcaaggattcatgc 43640725  T
Q  312 ataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||| |||||||||||||||||||||| || |||||||||||||||||||    
T  43640726 atagcacatatacataaccatccctccta-aatactagcatcacatgat 43640773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 201 - 360
Target Start/End: Complemental strand, 19435843 - 19435684
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||  | |||| |||||||||||||| ||||||| |||| ||| ||    
T  19435843 cgtctacccatccatatagacaggtaggcggtccatcatagatccattgggggtaagtattacataaatcataatcaacaaaaacaaatataagcattca 19435744  T
Q  301 agaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  19435743 aggattcatgcataacacatatacataaccacctctcctagaatactagcatcacatgat 19435684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 165 - 360
Target Start/End: Original strand, 6092676 - 6092864
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    ||||||||||||||||||||||||| |  | || |||||||||||||||||| ||| || ||||||||| |      | ||| ||||| ||||||| |||    
T  6092676 caagcaactcaccaaaagcaaactaatcatgcacttcgtctacccatccatatagacagataggcggtcaa------aaccaatgggg-taagctttaca 6092768  T
Q  265 tcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    |||||||||||||||||||||||||| |  ||| |||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  6092769 tcaatcataatcaacataaacaaacacaggcattcaaggattcatgcataacacatatacataaccatccctcctataatactagcatcacatgat 6092864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 201 - 360
Target Start/End: Original strand, 19657724 - 19657882
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    |||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||| | |||||| |||||||| ||||||||| |||||  ||| ||    
T  19657724 cgtctacctatccatacagacaggcatgcggtccatcacagatccactgggggtaagcattacatca-tcataatccacataaacagacataggcattca 19657822  T
Q  301 agaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || ||||||||||||||  ||||||||||||||  || ||||||||||||| ||||||||    
T  19657823 aggattcatgcataacaattatacataaccatctatcctagaatactagcaacacatgat 19657882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 45620354 - 45620229
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    ||||||||||| |||||| |||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||| |||||||||||||| ||| ||    
T  45620354 cgtctacccattcatacaaataggtaggcggtccaccacaga-ccactgagggttagcttcacatcaatcataatcaa-ataaacaaacataagcattca 45620257  T
Q  301 a-gaattcatgcataacacatatacata 327  Q
    | || |||||||||||||||||||||||    
T  45620256 aggatttcatgcataacacatatacata 45620229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 360
Target Start/End: Original strand, 20271209 - 20271326
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatc-aacataaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctcgtag 341  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||  ||||| ||| ||| || ||||||||| | ||||||||||| ||||||||| |||    
T  20271209 ccactgggggtaagcttcacatcaatcataatcaaacat-aacaggcataagcattcaaggatttcatgcatgatacatatacatacccatccctcctag 20271307  T
Q  342 aatactagcatcacatgat 360  Q
    | ||||| |||||||||||    
T  20271308 agtactaacatcacatgat 20271326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 3801367 - 3801311
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  3801367 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 3801311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 12638248 - 12638192
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  12638248 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 12638192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 19888981 - 19888925
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  19888981 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 19888925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 42180463 - 42180407
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  42180463 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 42180407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 23614446 - 23614339
Alignment:
Q  251 gggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctcgtagaatactag 349  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| ||| ||| || ||||||||||||||  |||| |||||||||||| ||| |||||||    
T  23614446 gggtaagattcacgtcaatcataatcaacataaacaaatataagcattcaaggatttcatgcataacac--atacctaaccatccctcctag-atactag 23614350  T
Q  350 catcacatgat 360  Q
    ||||| |||||    
T  23614349 catcagatgat 23614339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 21140078 - 21140134
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  21140078 cgtctacccatccatacagataggcagtcggtccataacagatccactgggggtaag 21140134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 124 - 286
Target Start/End: Original strand, 24272241 - 24272395
Alignment:
Q  124 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 223  Q
    |||||||||||||||||||  |||||||| |||| | ||| ||||||||||||| ||||| ||||| | || || |||||||||||||| ||||||| |     
T  24272241 gaaacgataacggagatagcacccgctatccaagcaatcaccaagcaactcacc-aaagc-aactaatcctgcacttcgtctacccatcaatacagacaa 24272338  T
Q  224 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    |||||| ||      || | ||| | ||||||||||| ||||||||||||||| |||||||||    
T  24272339 gtaggcagt------caaaaccattaggggtaagctttacatcaatcataatccacataaaca 24272395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 24089420 - 24089281
Alignment:
Q  115 agactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 214  Q
    |||||| |||| | |||| ||||||||| ||||||||| |||| |  || |||||||||||||||| |||| ||| | || ||   | ||||||||||||    
T  24089420 agactctaagacatgatagcggagatagctcccgctatccaagcaaccaccaagcaactcaccaaa-gcaa-ctaatcctgcacaacatctacccatcca 24089323  T
Q  215 tacagataggtaggcggtccatcacagatccactgggggtaa 256  Q
    |||| | | |||||||||||||||||||||||||| ||||||    
T  24089322 tacatacatgtaggcggtccatcacagatccactgcgggtaa 24089281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 248 - 357
Target Start/End: Original strand, 24839670 - 24839779
Alignment:
Q  248 tgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtagaatact 347  Q
    ||||||||||||| |||||||||||||||||||||   ||||| || ||| |||| |||||| ||||  ||||||| ||| |||||| ||  ||||||||    
T  24839670 tgggggtaagctttacatcaatcataatcaacatatgaaaacacaagcattcaaggattcatacatattacatataaatacccatccttcccagaatact 24839769  T
Q  348 agcatcacat 357  Q
    | ||||||||    
T  24839770 aacatcacat 24839779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 21276596 - 21276540
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||| ||||    
T  21276596 cgtctacccatccatacagataggcaggcagtccataacagatccactggggataag 21276540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 24966364 - 24966420
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||    
T  24966364 cgtctacccatccatactgataggcaggcggtccataacagatccactaggggtaag 24966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 34822254 - 34822310
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||    
T  34822254 cgtctacccatccatatagataggcaggcggtccagaacagatccactgggggtaag 34822310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 38707054 - 38706998
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||    
T  38707054 cgtctacccatccatacagataggcagacggtccataacagatccactaggggtaag 38706998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 7509910 - 7509865
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatcca 246  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  7509910 cgtctacccatccatacagataggcaggcggtccataacagatcca 7509865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 19643951 - 19644015
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaaca 75  Q
    |||||||||||||||||||| ||||| |||| |||||| |||||||||| |||  ||||||||||||    
T  19643951 acatcatcatataaattctctaaatctcgacgtatgggaaaaatctcaacaac--ataaatccaaca 19644015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 23170199 - 23170097
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtaga 342  Q
    ||||| ||||| ||||||||||| |||||| | || |||||  |||||||||| |  | || ||||||||| ||||||||| ||||||||||||| ||||    
T  23170199 ccactaggggttagcttcacatcgatcatacttaatcataagtaaacataaacttcaaggatttcatgcatgacacatatatataaccatccctcctaga 23170100  T
Q  343 ata 345  Q
    |||    
T  23170099 ata 23170097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 23581456 - 23581354
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacatgcaagaattcatgcataacacatatacataaccatccctcgtaga 342  Q
    ||||| ||||| ||||||||||| |||||| | || |||||  |||||||||| |  | || ||||||||| ||||||||| ||||||||||||| ||||    
T  23581456 ccactaggggttagcttcacatcgatcatacttaatcataagtaaacataaacttcaaggatttcatgcatgacacatatatataaccatccctcctaga 23581357  T
Q  343 ata 345  Q
    |||    
T  23581356 ata 23581354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 24272112 - 24272153
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  24272112 acatcatcataaaaattctccaaatcccgacaaatgggtaaa 24272153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 7319663 - 7319695
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||||||||||||||||    
T  7319663 cgtctacccatccatacagataggtaggcggtc 7319695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 24868806 - 24868877
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||| |||||||||||      || | ||||| | ||||||||| |||||||||||||||||    
T  24868806 cgtctacccatccatacagacaggtaggcggt------caaaaccactagaggtaagctttacatcaatcataatcaa 24868877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 231
Target Start/End: Original strand, 25600119 - 25600149
Alignment:
Q  201 cgtctacccatccatacagataggtaggcgg 231  Q
    |||||||||||||||||||||||||||||||    
T  25600119 cgtctacccatccatacagataggtaggcgg 25600149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 269374 - 269406
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  269374 cgtctacccatccatacagacaggtaggcggtc 269406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 4450226 - 4450194
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  4450226 cgtctacccatccatacagacaggtaggcggtc 4450194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 22137726 - 22137694
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  22137726 cgtctacccatccatacagacaggtaggcggtc 22137694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 22581913 - 22581881
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  22581913 cgtctacccatccatacagacaggtaggcggtc 22581881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 23614525 - 23614457
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||  |||||||||| |  | || ||||||||||||| |||||| | ||||||||||||    
T  23614525 caagcaactcaccggaagcaaactaatcatgcacttcgtctacccattcatacaaaaaggtaggcggtc 23614457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 24296474 - 24296442
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  24296474 cgtctacccatccatacagacaggtaggcggtc 24296442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 28972217 - 28972249
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  28972217 cgtctacccatccatacagacaggtaggcggtc 28972249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 32738731 - 32738763
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  32738731 cgtctacccatccatacagacaggtaggcggtc 32738763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 36892683 - 36892651
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  36892683 cgtctacccatccatacagacaggtaggcggtc 36892651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 360
Target Start/End: Original strand, 19404 - 19739
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  19404 acatcatcatataaattctccaaatcccgacatataggtaaaatctcaataataaataaatccaac-aagacataaagatcaacgtcctaatcagagcct 19502  T
Q  109 -aatctaagactccaagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtcta 206  Q
     ||||||||||||||||||||||||||| ||| ||| || |||||| |||              ||||||||||||||||||| | || || | ||||||    
T  19503 aaatctaagactccaagaaacgataacgaagattagctctcgctatccaa------------acactcaccaaaagcaaactactactgcactccgtcta 19590  T
Q  207 cccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaaca-tgcaa-gaa 304  Q
    | ||| |||||| | |||||||||||      || | |||||   | ||||||||||||||||||||||||||||||||||||||||||| | ||| ||     
T  19591 cacattcatacaaacaggtaggcggt------caaaaccact-atgttaagcttcacatcaatcataatcaacataaacaaacataaacatttcaaggat 19683  T
Q  305 ttcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  19684 ttcatgcataacatatatacataaccatccctcctagagtactagcatcacatgat 19739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 7e-68; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 25 - 360
Target Start/End: Original strand, 28718124 - 28718448
Alignment:
Q  25 tctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcctaa-tctaagactccaa 123  Q
    |||||||| ||| ||||| ||| |||||||| |||| ||||||||| |||||| ||||||||| |||| ||||||||||||||||| |||||||||  ||    
T  28718124 tctccaaaacccaacataagggcaaaatctccataataaataaatctaacaaatacataaagatcaacttcctaatcagagcctaaatctaagacttaaa 28718223  T
Q  124 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 223  Q
     |||||||||||| ||||| |||  |||| ||||           ||||||||  ||||||||||| |  | ||   ||||||||||| |||||| ||||    
T  28718224 -aaacgataacggggatagctcctactatccaag-----------caactcactgaaagcaaactaatcatgcacgccgtctacccattcatacaaatag 28718311  T
Q  224 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatata 323  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||| ||||||||||| ||||||||    
T  28718312 gtaggcggtccatcatagatccactgggggtaagcttcacattaatcataatcaacataaacaaacataggcattcaaggattcatgcatagcacatata 28718411  T
Q  324 cataaccatccctcgtagaatactagcatcacatgat 360  Q
    |||||||||||||  |||||| |||||||||||||||    
T  28718412 cataaccatcccttctagaattctagcatcacatgat 28718448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 99 - 360
Target Start/End: Original strand, 4482436 - 4482690
Alignment:
Q  99 atcagagcctaatctaagactccaa-gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||| ||||||  ||||||||| || ||||||||||||||||||| ||||||||| |||| | ||| |||||||||||||||| |||| ||| | || ||    
T  4482436 atcaaagcctatcctaagactctaatgaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccaaa-gcaa-ctaatcctgca 4482533  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacat 297  Q
     |||||||||||||||||||||| |||||||||||| |      |  |||||||||||||||| |||||||||||||||||||||||||||||||  |||    
T  4482534 cttcgtctacccatccatacagacaggtaggcggtcga------aatcactgggggtaagctttacatcaatcataatcaacataaacaaacataggcat 4482627  T
Q  298 gcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
     |||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  4482628 tcaaggattcatgcatagcacatatacataaccatccctcctagaatactagcatcacatgat 4482690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 167 - 360
Target Start/End: Complemental strand, 14278841 - 14278648
Alignment:
Q  167 agcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatc 266  Q
    |||||||| |||||||||||||||| || || |||||||||||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  14278841 agcaactc-ccaaaagcaaactagtcctgcacttcgtctacccatccataaagacaggtaggtggtccatcacagatccactaggggtaagcttcacatc 14278743  T
Q  267 aatcataatcaacataaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||||||||||||||||||||||||  ||| ||| || |||||||||||||||| ||||||||||||||||  ||||||||||||||| |||||    
T  14278742 aatcataatcaacataaacaaacataggcattcaaggatttcatgcataacacatttacataaccatccctcccagaatactagcatcatatgat 14278648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 127 - 360
Target Start/End: Complemental strand, 21677500 - 21677269
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||||||| ||| |  | ||    |||||||||| |||||| | |||||    
T  21677500 acgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagcaa-ctaatcatgcacgcagtctacccattcatacaaacaggta 21677402  T
Q  227 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatacat 326  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||  ||| |||| ||||||||||| |||||||||||    
T  21677401 ggcggtccattacagatccaatgggggtaagcttcacatcaatcataatcaacataaataaacataggcattcaaggattcatgcatagcacatatacat 21677302  T
Q  327 aaccatccctcgtagaatactagcatcacatgat 360  Q
    |||||| |||| ||||||||||||||||||||||    
T  21677301 aaccat-cctcctagaatactagcatcacatgat 21677269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 18081405 - 18081277
Alignment:
Q  13 catcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aat 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  18081405 catcatataaattctccaaatcccgacataagggtaaaatctcaataataaataaatccaacaaaaacataaagaccaacgtcctaatcagagcctaaat 18081306  T
Q  112 ctaagactccaagaaacgataacggagat 140  Q
    ||| |||||||||||||||||||||||||    
T  18081305 ctaggactccaagaaacgataacggagat 18081277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 360
Target Start/End: Complemental strand, 39294262 - 39293898
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaa---------ga-----cataaagaccaacgt 94  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||| ||||         ||     ||||||||    | |    
T  39294262 acatcatcatataaattcttcaagtaccgacatatgggtaaaatctcaataataaataaatccagcaaaaccaatctagaataatcataaagataggcat 39294163  T
Q  95 ccta-atcagagcctaatctaagactccaag--aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagt 191  Q
    |||| |||||||||||   |||||||| ||   |||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| ||||||| |    
T  39294162 cctagatcagagcctaccataagactcaaaagaaaacgataacggagatagctcccgctatccaagcaatcatcaagcaactcaccaaaatcaaactaat 39294063  T
Q  192 tcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacat 291  Q
      | || ||||||| ||||| |||||| | ||||||||| || |      | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39294062 catgcacttcgtctgcccattcatacaaacaggtaggcgatcaa------aaccactggggctaagcttcacatcaatcataatcaacataaacaaacat 39293969  T
Q  292 aaaca-tgcaa-gaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || || | ||| || |||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  39293968 aagcatttcaaggatttcatgtataacacatatacataaccatccctcctagaatactagcatcgcatgat 39293898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 201 - 360
Target Start/End: Complemental strand, 4072904 - 4072746
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    ||||||||||| |||||| | |||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||| ||    
T  4072904 cgtctacccattcatacaaacaggtaggcggtccaccacaga-ccactaggggttagcttcacatcaatcataatcaacataaacaa-cataagcattca 4072807  T
Q  301 agaatt-catgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||  || ||||||||||||||||||||| ||||||||| || ||||||| |||||||||||    
T  4072806 agggtttcatgcataacacatatacatacccatccctcctaaaatactaacatcacatgat 4072746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 200 - 360
Target Start/End: Original strand, 12245941 - 12246101
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacatg 298  Q
    |||||||||||| |||||| ||||||||||||| || |||||| ||||||||| || |||| ||||||||||||||||| |||||| || |||||||||     
T  12245941 tcgtctacccattcatacaaataggtaggcggtacaccacaga-ccactggggtta-gcttgacatcaatcataatcaaacataaataatcataaacatt 12246038  T
Q  299 caagaat-tcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    |||| || ||||||||||||||||||||||  |||||||| |||||||||| |||||||||||    
T  12246039 caaggatctcatgcataacacatatacatacacatccctcctagaatactaacatcacatgat 12246101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 14302762 - 14302613
Alignment:
Q  208 ccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacatgcaagaatt 306  Q
    |||| |||||| |||||||||||||||| |||||| ||||||||||| | |||||||| ||||||| |||| |||||||||  |||||||| |||| |||    
T  14302762 ccattcatacaaataggtaggcggtccaccacaga-ccactgggggttaacttcacattaatcatattcaagcataaacaattataaacattcaaggatt 14302664  T
Q  307 -catgcataacacatatacataaccatccctcgtagaatactagcatcaca 356  Q
     ||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  14302663 tcatgcatgacacatatacataaccatccctcttagaatattaacatcaca 14302613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 284
Target Start/End: Complemental strand, 15980617 - 15980350
Alignment:
Q  16 catataaattctccaaatcccgacatatgggtaaaatctcaataaca--aataaatccaacaaagacataaagaccaacgtccta-atcagagcctaatc 112  Q
    |||||||| ||| ||||||||||||||||||||||||||| | ||||  ||||||| ||  | |  ||||||||   || ||||| ||||||||||| ||    
T  15980617 catataaaatcttcaaatcccgacatatgggtaaaatctccacaacataaataaattcagaataatcataaagatagacatcctagatcagagcctactc 15980518  T
Q  113 taagactccaa-gaaacgataacggagat-aggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctaccca 210  Q
    |||||||| || ||| ||||||||||||| || ||||||||| |||| | ||| ||||||||||||| ||||||| ||| | || ||   ||||||||||    
T  15980517 taagactctaaagaaccgataacggagattagctcccgctatccaagcaatcaccaagcaactcaccgaaagcaatctaatcctacaaaacgtctaccca 15980418  T
Q  211 tccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 284  Q
    |   |||| | |||||||||||| |      | ||||||||||||||||||||||||||||| |||||||||||    
T  15980417 tttttacaaagaggtaggcggtcga------aaccactgggggtaagcttcacatcaatcattatcaacataaa 15980350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 17923050 - 17923117
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaa 76  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  17923050 acatcatcatataaattctccaaatcctgacatatgggtaaaatctcaataataaataaatccaacaa 17923117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 9641224 - 9641337
Alignment:
Q  112 ctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctaccca 210  Q
    ||||||||| ||| |||||||||||||||||| |||| |||| |||| | ||| ||||||||||||||||||||||||| | || || ||||||||||||    
T  9641224 ctaagactcaaaggaaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccaaaagcaaactaatcctacacttcgtctaccca 9641323  T
Q  211 tccatacagatagg 224  Q
    ||||||||| ||||    
T  9641324 tccatacaggtagg 9641337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 13460489 - 13460677
Alignment:
Q  95 cctaatcagagcctaatctaagactc-caagaaacgataacggaga-taggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagtt 192  Q
    |||||||| |||||||||||||||||  ||||| |||||||||||| ||| ||||||| | |||| | ||| |||| |||||||| ||||||||||| |     
T  13460489 cctaatcatagcctaatctaagactctaaagaaccgataacggagattagctcccgctgtccaaggaatcaccaagaaactcaccgaaagcaaactactc 13460588  T
Q  193 cttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    || || |  |||||||||| |||||| | |||||||||||      || | | | ||||||||||||| ||||||||||||||||||||||||||    
T  13460589 ctgcactctgtctacccattcatacaaacaggtaggcggt------caaaactattgggggtaagctttacatcaatcataatcaacataaacaa 13460677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 7286581 - 7286502
Alignment:
Q  203 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 283  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||  | ||||| ||||||||||||||||    
T  7286581 tctacccatccatacagatagttaggcggtccatcacagatccactaggggtaagtattacatc-atcataatcaacataa 7286502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 7290847 - 7290903
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  7290847 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 7290903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 14253324 - 14253268
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  14253324 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 14253268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 16416448 - 16416504
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16416448 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 16416504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 369083 - 369134
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  369083 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggg 369134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 17926887 - 17926954
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaa 76  Q
    |||| |||||||||||||||  |||||||||||||||||||| ||||||||| |||||||||||||||    
T  17926887 acattatcatataaattctctgaatcccgacatatgggtaaattctcaataataaataaatccaacaa 17926954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 9323007 - 9322893
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    ||||||||||||||||||||| ||| | || || |||||||||||||| ||||||| | |||||||||| |      | ||||||||||||||||| |||    
T  9323007 caagcaactcaccaaaagcaa-ctaatcctgcacttcgtctacccatcgatacagacaagtaggcggtcaa------aaccactgggggtaagctttaca 9322915  T
Q  265 tcaatcataatcaacataaaca 286  Q
    |||||||||||| |||||||||    
T  9322914 tcaatcataatccacataaaca 9322893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 11285287 - 11285343
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  11285287 cgtctactcatccatacagacaggtaggcggtccatcacaaatccactgggggtaag 11285343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 16481090 - 16481034
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  16481090 cgtctacccattcatacagataggcaggcggtccataacagatccactgggggtaag 16481034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 19065539 - 19065623
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaattcatgcataacacatatacata 327  Q
    |||||| |||| |||||||||||||||||||||| ||||||||||||||| |||  || || |||||||||| ||||||||||||    
T  19065539 ccactgtgggttagcttcacatcaatcataatcatcataaacaaacataagcatttaaggatttcatgcatatcacatatacata 19065623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 2192859 - 2192808
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  2192859 cgtctacccatccatacagataggcaggcggtccataacagatccactgggg 2192808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 12545862 - 12545815
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccact 248  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  12545862 cgtctacccatccatacagacaggtaggcggtccatcacagatccact 12545815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 12245755 - 12245866
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataac--aaataaatccaacaaagacataaagaccaacgtcctaatcagagc 106  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| |||||  |||||||||| | | |  ||||||||   ||  ||||||||||||    
T  12245755 acatcatcatataaaatctccaaatcccgacatatgggcaaaatctccataacataaataaatcc-agagaatcataaagattgac-acctaatcagagc 12245852  T
Q  107 ctaatctaagactc 120  Q
    ||||||||||||||    
T  12245853 ctaatctaagactc 12245866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 13868141 - 13868060
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 283  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||  | ||||| ||||||||| ||||||    
T  13868141 cgtctacccatccatacagacaggtaggcaatccatcacagatccactaggggtaagtattacatc-atcataatccacataa 13868060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 15305693 - 15305768
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||  ||||||||||  |||||||||||    
T  15305693 cgtctacccattcatacagataggtaggcggtccaccacaga-ccactgggggctagcttcacat-tatcataatcaa 15305768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 16370452 - 16370399
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca 62  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  16370452 acatcatcatataaaatctccaaatcccgacatataggtaaaatctcaacaaca 16370399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 18305892 - 18305836
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  18305892 cgtctactcatccatacagacaggtaggcagtccatcacagatccactaggggtaag 18305836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 5617721 - 5617800
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    |||||||||||||||||||| |||||||||||| |      | ||||||||||||||| | ||||||||||||||| |||||||||    
T  5617721 cgtctacccatccatacagacaggtaggcggtcaa------aaccactgggggtaagcattacatcaatcataatccacataaaca 5617800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 3048007 - 3048060
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggt 254  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||| |||||    
T  3048007 cgtctacccatccatacagataggcaggccgtccataacagatccactaggggt 3048060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 3193904 - 3193868
Alignment:
Q  250 ggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    |||||||||||||||||||||||||||||||||||||    
T  3193904 ggggtaagcttcacatcaatcataatcaacataaaca 3193868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 4073098 - 4073050
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaa 57  Q
    ||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  4073098 acatcatcatataaaatctccaaatcccgatatatgggtaatatctcaa 4073050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 305 - 356
Target Start/End: Original strand, 3135512 - 3135563
Alignment:
Q  305 ttcatgcataacacatatacataaccatccctcgtagaatactagcatcaca 356  Q
    |||||||||||||||||||||||  |||||||| |||||||||| |||||||    
T  3135512 ttcatgcataacacatatacatacacatccctcctagaatactaacatcaca 3135563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 14302942 - 14302845
Alignment:
Q  19 ataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaaga 117  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||| | | ||| |||      ||||||||| ||| ||||||||||| ||||||||||||    
T  14302942 ataaaatctacaaatcccgacatatgggtaaaatctcaacaacatactcaatgcaa-----tcataaagactaacatcctaatcagatcctaatctaaga 14302848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 16915915 - 16915994
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    |||||||||||||||||||| |||||||||||      || | ||||||||||||||  | ||||||||||||||| |||||||||    
T  16915915 cgtctacccatccatacagacaggtaggcggt------caaaaccactgggggtaagtattacatcaatcataatccacataaaca 16915994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 16206293 - 16206420
Alignment:
Q  202 gtctacccatccatacagataggtaggcggtccatcacagatccactggggg-taagcttcacatcaatcataatcaacataaac--aaacataaacatg 298  Q
    |||||||||| |||||| ||||| |||||||| |||  |   |||||||||| | |||||||||||| |||||||||| ||| |   ||| |||| |||     
T  16206293 gtctacccattcatacaaataggcaggcggtcaatcgaacgaccactggggggttagcttcacatca-tcataatcaagatataataaaaaataagcatt 16206391  T
Q  299 caagaattcatgcataacacatatacata 327  Q
    |||| ||||||||||||||||||||||||    
T  16206392 caaggattcatgcataacacatatacata 16206420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 18921042 - 18920976
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||| |||| ||| | || || |||||||||||||||||||||| ||||||||||||    
T  18921042 caagcaactcaccaaa-gcaa-ctaatcctgcacttcgtctacccatccatacagacaggtaggcggtc 18920976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 287
Target Start/End: Original strand, 13452419 - 13452535
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcaca 264  Q
    ||||||||||||| ||||||||| | | || || || ||||||| || |||||| | |||||||||||| |      | | ||||||| ||| ||| |||    
T  13452419 caagcaactcaccgaaagcaaaccactcctgcactttgtctaccaattcatacaaacaggtaggcggtcaa------aactactggggataaactttaca 13452512  T
Q  265 tcaatcataatcaacataaacaa 287  Q
    |||||||||||||||||||||||    
T  13452513 tcaatcataatcaacataaacaa 13452535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 233
Target Start/End: Original strand, 14938890 - 14939007
Alignment:
Q  115 agactccaagaaac-gataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcc 213  Q
    |||||| ||||||| |||| ||||||||| ||||| ||| |||| |  || ||||||||||||| || |||| ||| | || ||  ||||||||||||||    
T  14938890 agactctaagaaaccgataccggagatagctcccgatatccaagcaagcaccaagcaactcaccgaa-gcaa-ctaatcctacacgtcgtctacccatcc 14938987  T
Q  214 atacagataggtaggcggtc 233  Q
    ||||||| ||||||||||||    
T  14938988 atacagacaggtaggcggtc 14939007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 233
Target Start/End: Original strand, 15366483 - 15366600
Alignment:
Q  115 agactccaagaaac-gataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcc 213  Q
    |||||| ||||||| |||| ||||||||| ||||| ||| |||| |  || ||||||||||||| || |||| ||| | || ||  ||||||||||||||    
T  15366483 agactctaagaaaccgataccggagatagctcccgatatccaagcaagcaccaagcaactcaccgaa-gcaa-ctaatcctacacgtcgtctacccatcc 15366580  T
Q  214 atacagataggtaggcggtc 233  Q
    ||||||| ||||||||||||    
T  15366581 atacagacaggtaggcggtc 15366600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 9058613 - 9058497
Alignment:
Q  115 agactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatcca 214  Q
    |||||| |||| |||||| ||||||||| ||||||||| |||| |  || | ||| |||||||||| |||| ||| | || ||   ||||||||||||||    
T  9058613 agactctaagacacgatagcggagatagctcccgctatccaagcaaccaccgagccactcaccaaa-gcaa-ctaatcctgcacaacgtctacccatcca 9058516  T
Q  215 tacagataggtaggcggtc 233  Q
    |||||| ||||||||||||    
T  9058515 tacagacaggtaggcggtc 9058497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 344
Target Start/End: Complemental strand, 15980337 - 15980299
Alignment:
Q  306 tcatgcataacacatatacataaccatccctcgtagaat 344  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  15980337 tcatgcataacacatatacatacccatccctcctagaat 15980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 17948136 - 17948072
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataac--aaataaatcca 72  Q
    ||||||||||| |||||||||||||||||||| |||||  ||||||||| |||  |||||||||||    
T  17948136 acatcatcataaaaattctccaaatcccgacaaatggg-caaatctcaacaacataaataaatcca 17948072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 31499504 - 31499538
Alignment:
Q  199 ttcgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||||| ||||||||||||    
T  31499504 ttcgtctacccatccatacagacaggtaggcggtc 31499538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 13388251 - 13388331
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    |||||||||||||||||||| ||||||||||||      | | ||||||||||||||  | ||||||||||||||| |||| ||||    
T  13388251 cgtctacccatccatacagacaggtaggcggtc-----aaaaaccactgggggtaagtattacatcaatcataatccacatgaaca 13388331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 15628948 - 15628981
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  15628948 tcgtctacccatccatacagacaggtaggcggtc 15628981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 141815 - 141847
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  141815 cgtctacccatccatacagacaggtaggcggtc 141847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 2024634 - 2024683
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||    
T  2024634 cgtctacccatccaga--gacaggcaggcggtccatcacagatccactgggg 2024683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 4437141 - 4437169
Alignment:
Q  202 gtctacccatccatacagataggtaggcg 230  Q
    |||||||||||||||||||||||||||||    
T  4437141 gtctacccatccatacagataggtaggcg 4437169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 13375949 - 13375981
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  13375949 cgtctacccatccatacagacaggtaggcggtc 13375981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 15914326 - 15914294
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  15914326 cgtctacccatccatacagacaggtaggcggtc 15914294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 45455636 - 45455604
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  45455636 cgtctacccatccatacagacaggtaggcggtc 45455604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 49049778 - 49049746
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  49049778 cgtctacccatccatacagacaggtaggcggtc 49049746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 116; Significance: 6e-59; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 99050 - 98920
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  99050 acatcattatataaattctccaaatcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 98951  T
Q  109 aatctaagactccaagaaacgataacggagat 140  Q
    |||||||||||||||| |||||||||||||||    
T  98950 aatctaagactccaag-aacgataacggagat 98920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 244 - 360
Target Start/End: Complemental strand, 256667 - 256550
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctcgtaga 342  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||||| ||||||||||||||||||||||||||| ||||    
T  256667 ccactaggggtaagcttcacatcaatcataatcaacataaacaaacataagcattcaaggatttcatacataacacatatacataaccatccctcctaga 256568  T
Q  343 atactagcatcacatgat 360  Q
    |||||| | |||||||||    
T  256567 atactaacttcacatgat 256550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 270268 - 270324
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  270268 cgtctacccatccatacagataggcaagcggtccatcacagatccactgggggtaag 270324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 98833 - 98797
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaaca 280  Q
    |||| |||| |||||||||||||||||||||||||||    
T  98833 ccacaggggttaagcttcacatcaatcataatcaaca 98797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 9 - 178
Target Start/End: Original strand, 7150 - 7320
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  7150 acatcatcatataaattctccaaattccgacatatggataaaatctcaataataaataaatccaacaaagacataaagaccaacgttctaatcagagcct 7249  T
Q  109 -aatctaagactccaagaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcacca 178  Q
     ||| ||||||||||| ||||||||||| |||||  ||||||||| |||| | ||| ||||||||||||||    
T  7250 aaatttaagactccaaaaaacgataacgaagataactcccgctatccaagcaatcaccaagcaactcacca 7320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 3484 - 3353
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||    
T  3484 acatcattatataaattcttcaaatcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagatcaacgtcctaattagagcct 3385  T
Q  109 aatctaagactccaagaaacgataacggagat 140  Q
    |||||||||||||||| |||||||||||||||    
T  3384 aatctaagactccaaggaacgataacggagat 3353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 3304 - 3215
Alignment:
Q  261 cacatcaatcataatcaacataaacaaacataaacatgcaagaatt-catgcataacacatatacataaccatccctcgtagaatactag 349  Q
    |||||||||||||||||| |||||||||||||| ||| |||| ||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  3304 cacatcaatcataatcaaaataaacaaacataagcattcaaggatttcatgcataacaaatatacataaccatccctcctagaatactag 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 99 - 359
Target Start/End: Complemental strand, 29162919 - 29162665
Alignment:
Q  99 atcagagcctaatctaagactccaagaa-acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| | |||||||||||||||| ||||| ||| |||| | ||| ||||||||||||||||||||| ||||| || ||    
T  29162919 atcagagcctaccctaagactctaaggatacgataacggagatagctcccgatatccaagcaatcaccaagcaactcaccaaaagcaa-ctagtcctgca 29162821  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacat 297  Q
     |||||| ||||||||||||||| |||||||||||| |      | ||| ||||||||||||| |||||| || |||||||||||||||||||||  |||    
T  29162820 cttcgtccacccatccatacagacaggtaggcggtcaa------aaccattgggggtaagctttacatcagtcctaatcaacataaacaaacataggcat 29162727  T
Q  298 gcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatga 359  Q
     |||| ||||||||||||||||||||||||  |||||||| |||||||||| ||||||||||    
T  29162726 tcaaggattcatgcataacacatatacatagtcatccctcctagaatactatcatcacatga 29162665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 125 - 356
Target Start/End: Original strand, 21929634 - 21929859
Alignment:
Q  125 aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatagg 224  Q
    |||||||||||||||||| |||| |||| |||| | ||| ||||||||||||| ||||||||||| |  | || ||||||||||||| |||||| | |||    
T  21929634 aaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccgaaagcaaactaatcatgcatttcgtctacccattcatacaaacagg 21929733  T
Q  225 taggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaattcatgcataacacatatac 324  Q
    ||||||||| |      | ||||||| |||||| || |||||||||||||||||||||| ||||||||| ||| |||| |||||||||||||||||||||    
T  21929734 taggcggtcaa------aaccactggaggtaaggtttacatcaatcataatcaacataagcaaacataagcattcaaggattcatgcataacacatatac 21929827  T
Q  325 ataaccatccctcgtagaatactagcatcaca 356  Q
    ||||||||| ||| |||||||||| |||||||    
T  21929828 ataaccatctctcctagaatactatcatcaca 21929859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 99 - 357
Target Start/End: Original strand, 16131426 - 16131681
Alignment:
Q  99 atcagagcctaatctaagactccaag--aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttc 196  Q
    |||||||||||  ||||||||| ||   |||||||||||||||||| ||| | ||| |||  | ||| ||||||||||||||||||||||||| | || |    
T  16131426 atcagagcctaccctaagactcaaaagaaaacgataacggagatagctcctgttatccaaacaatcaccaagcaactcaccaaaagcaaactaatcctgc 16131525  T
Q  197 agttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaaca 296  Q
    | ||||||||||||| |||||| | ||||||| |||| |      | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  16131526 acttcgtctacccattcatacaaacaggtaggtggtcaa------aaccactggggataagcttcacatcaatcataatcaacataaacaaacataagca 16131619  T
Q  297 tgcaa-gaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacat 357  Q
    | ||| || ||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||    
T  16131620 ttcaaggatttcatgcataaaacatatacatatccatccctcctagaatactaacatcacat 16131681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 23219619 - 23219728
Alignment:
Q  253 gtaagcttcacatcaatcataatcaacataaacaaacataaacatg-caagaatt-catgcataacacatatacataaccatccctcgtagaatactagc 350  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  |||| ||| ||||||||||||||||||||||||||||||| |||||||| |||    
T  23219619 gtaagcttcacatcaatcataatcaacataaacaaacataagcatttcaaggatttcatgcataacacatatacataaccatccctcctagaatacaagc 23219718  T
Q  351 atcacatgat 360  Q
    ||||||||||    
T  23219719 atcacatgat 23219728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 95 - 284
Target Start/End: Complemental strand, 17375739 - 17375555
Alignment:
Q  95 cctaatcagagcctaatctaagactccaagaaac-gataacggagat-aggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagtt 192  Q
    |||||||| ||||||||||||||||  ||  ||| |||||||||||| || ||||||||| |||| | ||| ||||||||||||| ||||||||||| |     
T  17375739 cctaatcaaagcctaatctaagactttaaagaactgataacggagattagttcccgctatccaagcaatcaccaagcaactcaccgaaagcaaactaatc 17375640  T
Q  193 cttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 284  Q
    || || ||||||||||||| |||||| | |||||||||||      || | ||||| |||||||||||||||||||||||||||||||||||    
T  17375639 ctgcacttcgtctacccattcatacaaacaggtaggcggt------caaaaccact-ggggtaagcttcacatcaatcataatcaacataaa 17375555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 277
Target Start/End: Complemental strand, 22595666 - 22595494
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| |||| | ||| ||||||||||| ||||||| ||||| | || ||    
T  22595666 atcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcatcaaaagc-aactaatcctgca 22595568  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatca 277  Q
     |||||||||||||||||||||| |||||||||||      || | ||||||| ||||||||| ||||||| ||||||||    
T  22595567 cttcgtctacccatccatacagacaggtaggcggt------caaaaccactggaggtaagcttgacatcaaacataatca 22595494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 276
Target Start/End: Original strand, 34965100 - 34965273
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||||||||||| |  | ||    
T  34965100 atcagagcctaccctaagactcaaaggaaacgataacggagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagcaaactaatcttgca 34965199  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccact-gggggtaagcttcacatcaatcataatc 276  Q
      ||||||||||||||||| ||| |||||||||||      || | ||||| |||||||||||| |||||||||||||||    
T  34965200 cgtcgtctacccatccatatagacaggtaggcggt------caaaaccactggggggtaagctttacatcaatcataatc 34965273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 275
Target Start/End: Complemental strand, 22468086 - 22467942
Alignment:
Q  124 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 223  Q
    ||||||||||||||||||| |||| |||| |||| | ||| ||||||||||||||||| ||| ||| |  | || |||||||||||||||||||||||||    
T  22468086 gaaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccaaaatcaa-ctaatcatgcacttcgtctacccatccatacagatag 22467988  T
Q  224 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataat 275  Q
    |||||||||      || | |||||| |||||||||| ||||||||||||||    
T  22467987 gtaggcggt------caaaaccactgagggtaagctttacatcaatcataat 22467942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 360
Target Start/End: Complemental strand, 31163228 - 31163070
Alignment:
Q  202 gtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaaca-taaacaaacataaacatgca 300  Q
    |||||||||| |||||| |||||||||||||||| || ||| ||||||||  || ||||||||| |||||||| ||| | ||| ||||||||| ||| ||    
T  31163228 gtctacccattcatacaaataggtaggcggtccaccataga-ccactgggatta-gcttcacatgaatcataaacaagaataagcaaacataagcattca 31163131  T
Q  301 agaattc-atgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    || |||  ||||||||| |||||||||| ||||||||| |||||||||| |||||||||||    
T  31163130 aggattttatgcataactcatatacatacccatccctcctagaatactaacatcacatgat 31163070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 4988927 - 4988983
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  4988927 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 4988983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 16235707 - 16235763
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16235707 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 16235763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 19627437 - 19627493
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  19627437 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 19627493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 23975647 - 23975703
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  23975647 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 23975703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 33316667 - 33316611
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  33316667 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 33316611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 35017706 - 35017650
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  35017706 cgtctacccatccatacagataagcaggcggtccatcacagatccactgggggtaag 35017650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 286
Target Start/End: Original strand, 19852456 - 19852610
Alignment:
Q  124 gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagatag 223  Q
    |||| ||||||| |||||| ||||||||| |||| | ||| ||||||||||||| || |||| ||| |  | ||  ||||||||||||||||||||||||    
T  19852456 gaaatgataacgaagatagctcccgctatccaagcaatcaccaagcaactcacccaa-gcaa-ctaatcttgcatgtcgtctacccatccatacagatag 19852553  T
Q  224 gtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    |||||||||      || | ||||| ||||||||||| ||||||||||||||| |||||||||    
T  19852554 gtaggcggt------caaaaccactaggggtaagctttacatcaatcataatccacataaaca 19852610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 4174627 - 4174546
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    |||||||||||||||||| | |||||||||||| |    ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  4174627 cgtctacccatccatacaaacaggtaggcggtcaa----aga-ccactgggggttagcttcacatcaatcataatcaacataaacaa 4174546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 4230256 - 4230175
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    |||||||||||||||||| | |||||||||||| |    ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  4230256 cgtctacccatccatacaaacaggtaggcggtcaa----aga-ccactgggggttagcttcacatcaatcataatcaacataaacaa 4230175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 14628622 - 14628566
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  14628622 cgtctacccatccatacagataggcaggcggtccataacagatccactaggggtaag 14628566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 18005111 - 18005055
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  18005111 cgtctacccatccatacagataggcaggcggtccataacagatccactgggtgtaag 18005055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 18578773 - 18578829
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  18578773 cgtctacccatccatacagataggcagtcggttcatcacagatccactgggggtaag 18578829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 18835605 - 18835549
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  18835605 cgtctacccatccatacagataggcaggcggtccataacagacccactgggggtaag 18835549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 18843961 - 18843905
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  18843961 cgtctacccatccatacagatatgcaggcggtccataacagatccactgggggtaag 18843905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 18397107 - 18397154
Alignment:
Q  205 tacccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  18397107 tacccatccatacagacaggtaggcggtccatcacagatccactgggg 18397154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 327
Target Start/End: Original strand, 16374242 - 16374364
Alignment:
Q  203 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaag 302  Q
    ||||||||| |||| | |||||||||||||||| | || | ||||||||| || ||||||||||||||||||  |  ||||| |||||||||||| ||||    
T  16374242 tctacccattcatataaataggtaggcggtccaccgcata-ccactggggtta-gcttcacatcaatcataacaagaataaagaaacataaacattcaag 16374339  T
Q  303 aattcatgcataacacatatacata 327  Q
     |||||||||| ||| ||| |||||    
T  16374340 gattcatgcatgacaaatacacata 16374364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 16828064 - 16828008
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||    
T  16828064 cgtctacccatccatacagataggcaggcggtccataacagatccattggggttaag 16828008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 35011377 - 35011321
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  35011377 cgtcgacccatctataaagataggcaggcggtccatcacagatccactgggggtaag 35011321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 287
Target Start/End: Complemental strand, 17858258 - 17858215
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  17858258 ccactggaggtaagcttcacatcaatcataatcaacataaacaa 17858215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 16374062 - 16374163
Alignment:
Q  19 ataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatctaaga 117  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||   | ||||||| | | ||||||||||  || |||||||||||| |||||||||||    
T  16374062 ataaaatctccaaatcccaacatatgggtaaaatctcaacaacatgctcaatccaagata-acataaagactcacatcctaatcagagtctaatctaaga 16374160  T
Q  118 ctc 120  Q
    |||    
T  16374161 ctc 16374163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 22846386 - 22846465
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    ||||||||||||||||||||||||||||||||      || | ||||| ||| ||||||| ||||||||||||||| |||||||||    
T  22846386 cgtctacccatccatacagataggtaggcggt------caaaaccacttgggataagctttacatcaatcataatccacataaaca 22846465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 33540140 - 33540069
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||| |||||||||||      || | |||||||| |||||||| |||||||||||||||||    
T  33540140 cgtctacccatccatacagacaggtaggcggt------caaaaccactgggcgtaagctttacatcaatcataatcaa 33540069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 19852329 - 19852370
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  19852329 acatcatcataaaaattctccaaatcccgacaaatgggtaaa 19852370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 22595770 - 22595729
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  22595770 acatcatcatataaattctccaaaccccgacaaatgggtaaa 22595729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 15006646 - 15006587
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaag 157  Q
    |||||||||||  ||||||||| ||| ||||||||| |||||||||||||||||| ||||    
T  15006646 atcagagcctatcctaagactctaaggaaacgataatggagataggtcccgctatccaag 15006587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 16131326 - 16131365
Alignment:
Q  16 catataaattctccaaatcccgacatatgggtaaaatctc 55  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  16131326 catataaaatctccaaatcccgacatatgggcaaaatctc 16131365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 278
Target Start/End: Complemental strand, 31469517 - 31469375
Alignment:
Q  128 cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtag 227  Q
    ||||||||||||||| ||||||||| |||| |  || |||| ||||||||||| |||| |||   || || ||||||||| |||||||| ||| ||||||    
T  31469517 cgataacggagatagctcccgctatccaagcaaacaccaagtaactcaccaaa-gcaa-ctaaccctgcacttcgtctactcatccatagagacaggtag 31469420  T
Q  228 gcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||      || | | ||| ||||||||||| |||||||||||||||||    
T  31469419 gcggt------caaaactactaggggtaagctttacatcaatcataatcaa 31469375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 941033 - 941001
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  941033 cgtctacccatccatacagacaggtaggcggtc 941001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 21621371 - 21621403
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  21621371 cgtctacccatccatacagacaggtaggcggtc 21621403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 25917926 - 25917958
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  25917926 cgtctacccatccatacagacaggtaggcggtc 25917958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 32896227 - 32896259
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  32896227 cgtctacccatccatacagacaggtaggcggtc 32896259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 99; Significance: 9e-49; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 45688 - 45558
Alignment:
Q  11 atcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-a 109  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  45688 atcatcatataaattcttcaagtctcgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagaccaacgtcctaatcagaacctaa 45589  T
Q  110 atctaagactccaagaaacgataacggagat 140  Q
    ||||| |||||||||||||||||||||||||    
T  45588 atctaggactccaagaaacgataacggagat 45558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 45464 - 45432
Alignment:
Q  252 ggtaagcttcacatcaatcataatcaacataaa 284  Q
    |||||||||||||||||||||||||||||||||    
T  45464 ggtaagcttcacatcaatcataatcaacataaa 45432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 73393 - 73245
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct 108  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| |    
T  73393 acatcatcatataaattctccaagtcccgacatatgggtaaaatatcaataataaataaatccaac-aagacatcaagaccaacgtcctaatcagagctt 73295  T
Q  109 aatctaagactccaagaaacgataacggaga-taggtcccgctattcaag 157  Q
    |||||||||||| |||||||||||||| ||| ||| ||||||||| ||||    
T  73294 aatctaagactcaaagaaacgataacgaagattagctcccgctatccaag 73245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 287
Target Start/End: Complemental strand, 1990 - 1947
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||    
T  1990 ccactgggggtaagcattacatcaatcataatccacataaacaa 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 4847 - 4720
Alignment:
Q  13 catcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcct-aat 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |||    
T  4847 catcataaaaattctccaaatcccgacatatgggtaaaatctcaataataaataaatccaac-aagacataaagaccaacgtccaaatcagagcctaaat 4749  T
Q  112 ctaagactccaagaaacgataacggagat 140  Q
    ||| ||||||||||||||||||| |||||    
T  4748 ctaggactccaagaaacgataacagagat 4720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 360
Target Start/End: Complemental strand, 7048 - 6886
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatca---acataaacaaacataaacat 297  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||   | |||||||||||||  |||    
T  7048 cgtctacccatccatacagacaggtaggcggtccatcactgatccactggtggtaagctttacatcaatcataatcaatgaaataaacaaacataggcat 6949  T
Q  298 gcaagaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
     |||| |||||||||||  | ||||||||||||||||||| || |||||||||||||||||||    
T  6948 tcaaggattcatgcatagtatatatacataaccatccctcctaaaatactagcatcacatgat 6886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 37058 - 36944
Alignment:
Q  246 actgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaagaat-tcatgcataacacatatacataaccatccctcgtagaat 344  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| || ||||||||||||||||||| || |||||  |  ||||||    
T  37058 actgggggtaagcttcacatcaatcataatcaacataaacaaa-ataagcattcaaggatctcatgcataacacatatacctacccatcatttctagaat 36960  T
Q  345 actagcatcacatgat 360  Q
    |||| |||||||||||    
T  36959 actaacatcacatgat 36944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 360
Target Start/End: Complemental strand, 15254 - 15096
Alignment:
Q  202 gtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgcaa 301  Q
    |||| ||||| |||| | ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| |||    
T  15254 gtcttcccattcatataaataggtaggcggtccatcacaga-ccactgggggttagcttcacataaatcataatcaacataaacaaacataagcattcaa 15156  T
Q  302 -gaattcatgcataacacatatacataaccatccctcgtagaatactagcatcacatgat 360  Q
     || ||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||    
T  15155 ggatttcatgcataacatatatacatacccatccctcctagaatactaacatcacatgat 15096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 11418 - 11560
Alignment:
Q  10 catcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagccta 109  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || | |||||| ||||||||    
T  11418 catcatcacaaaaatcctccaaatcccgacatatgggtaaaatctcaataataaataaatccaacaaagacataaagactaatg-cctaattagagccta 11516  T
Q  110 atctaagactccaagaaacgataacggaga-taggtcccgctat 152  Q
    ||||||||||| |||||||||||| ||||| ||| |||||||||    
T  11517 atctaagactcaaagaaacgataatggagattagctcccgctat 11560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 323
Target Start/End: Original strand, 11561 - 11702
Alignment:
Q  176 ccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataat 275  Q
    |||||||||||||| | || || | ||||||||||| |||||| | |||||||||||| |      | ||||| ||||| || || ||||||||||||||    
T  11561 ccaaaagcaaactactcctacaatccgtctacccattcatacaaacaggtaggcggtcaa------aaccactaggggttagttttacatcaatcataat 11654  T
Q  276 caacataaacaaacataaacatgcaa-gaattcatgcataacacatata 323  Q
    |||||||||||||||| ||||| ||| || ||||||||||||| |||||    
T  11655 caacataaacaaacat-aacattcaaggatttcatgcataacatatata 11702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 173 - 356
Target Start/End: Complemental strand, 13323 - 13145
Alignment:
Q  173 tcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcat 272  Q
    ||||| ||||||||||| |||| || ||||||||||||| |||||||| |||||||||||| |      | |||||  ||||||||||||||||||||||    
T  13323 tcaccgaaagcaaactatttctacacttcgtctacccattcatacagacaggtaggcggtcaa------aaccactatgggtaagcttcacatcaatcat 13230  T
Q  273 aatcaacataaacaaacataaacatgcaa-gaattcatgcataacacatatacataaccatccctcgtagaatactagcatcaca 356  Q
    ||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||| |||| |||| |||||||||| |||||||    
T  13229 aatcaacataaacaaacataagcattcaaggatttcatgcataacacatatacatacccatgcctcctagaatactatcatcaca 13145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 49557 - 49680
Alignment:
Q  9 acatcatcatataaattctccaaa-tcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcc 107  Q
    ||||||||| | ||||||| |||| |||||||||||||||||||||||||||| ||  ||||| |||||||  | ||||||||||||| |||||||||||    
T  49557 acatcatcagaaaaattcttcaaaatcccgacatatgggtaaaatctcaataataaccaaatctaacaaagggaaaaagaccaacgtcttaatcagagcc 49656  T
Q  108 taatctaagactccaagaaacgat 131  Q
    ||||||||||||||||||||||||    
T  49657 taatctaagactccaagaaacgat 49680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 54088 - 54211
Alignment:
Q  9 acatcatcatataaattctccaaa-tcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaagaccaacgtcctaatcagagcc 107  Q
    ||||||||| | ||||||| |||| |||||||||||||||||||||||||||| ||  ||||| |||||||  | ||||||||||||| |||||||||||    
T  54088 acatcatcagaaaaattcttcaaaatcccgacatatgggtaaaatctcaataataaccaaatctaacaaagggaaaaagaccaacgtcttaatcagagcc 54187  T
Q  108 taatctaagactccaagaaacgat 131  Q
    ||||||||||||||||||||||||    
T  54188 taatctaagactccaagaaacgat 54211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 55672 - 55781
Alignment:
Q  171 actcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatc 270  Q
    ||||||||||||||||||| | || || ||||||||| ||| |||| | | |||||||||||| |      | ||||| |||||||||||||||||||||    
T  55672 actcaccaaaagcaaactactcctgcacttcgtctactcattcatagaaacaggtaggcggtcaa------aaccactaggggtaagcttcacatcaatc 55765  T
Q  271 ataatcaacataaaca 286  Q
    |||||| |||||||||    
T  55766 ataatccacataaaca 55781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1923 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold1923
Description:

Target: scaffold1923; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 203 - 357
Target Start/End: Original strand, 646 - 801
Alignment:
Q  203 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaac-ataaacaaacataaacatgcaa 301  Q
    ||||||||| |||||| |||||||||||||||| |||||| |||||| |||| | |||||||||||||||||||||  |||||||| ||||||||| |||    
T  646 tctacccattcatacaaataggtaggcggtccaccacaga-ccactgagggttatcttcacatcaatcataatcaaatataaacaaccataaacattcaa 744  T
Q  302 gaatt-catgcataacacatatacataaccatccctcgtagaatactagcatcacat 357  Q
    | ||| ||||||| |||||||| ||||||||||||||  |||||| || ||||||||    
T  745 ggatttcatgcatgacacatatgcataaccatccctctgagaatattaacatcacat 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 5595 - 5721
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaacatgca 300  Q
    ||||||||||| |||||| |||||||||||||||| || | | ||||||||||| | |||||||||||||||||||||||||||||||||||| ||| ||    
T  5595 cgtctacccattcatacaaataggtaggcggtccaccataca-ccactgggggttaacttcacatcaatcataatcaacataaacaaacataagcattca 5693  T
Q  301 a-gaattcatgcataacacatatacata 327  Q
    | || ||||| |||||||||||||||||    
T  5694 aggatttcattcataacacatatacata 5721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 360
Target Start/End: Complemental strand, 22449 - 22329
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatcaacataaacaaacataaaca---tgcaagaatt-catgcataacacatatacataaccatccctcgt 339  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||   | |||| ||| ||||||| ||||||||| ||||||||||||| |    
T  22449 ccactaggggtaagcttcacatcaatcacaatcaacataaacaaacataagcagcattcaaggatttcatgcatgacacatatatataaccatccctcct 22350  T
Q  340 agaatactagcatcacatgat 360  Q
    |||||||||||||||||||||    
T  22349 agaatactagcatcacatgat 22329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 12573 - 12497
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataacaaataaatccaacaaagacataaa 85  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  12573 acatcatcatataaattctcaaaatcccggcatatgggtaaaatctcaataataaataaatccaacaaagacataaa 12497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 744 - 688
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  744 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 4544 - 4679
Alignment:
Q  16 catataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtcctaatcagagcctaatcta 114  Q
    |||||||| ||||||||||||||||||||||||||||||||| | || || ||||| | || | ||||| ||||  || |||||||||||||||||||||    
T  4544 catataaaatctccaaatcccgacatatgggtaaaatctcaacagcataacaaatctagcata-acatagagactgacatcctaatcagagcctaatcta 4642  T
Q  115 agactccaagaaacg-ataacggagataggtcccgctat 152  Q
    ||||||||  ||||| ||||||||||||| |||||||||    
T  4643 agactcca--aaacgaataacggagatagctcccgctat 4679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 4761 - 4803
Alignment:
Q  245 cactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  4761 cactgggggttaacttcacatcaatcataatcaacataaacaa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 247710 - 247625
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaacaa 287  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||| ||||||    
T  247710 cgtctacccattcatacaaataggtaggcggtccaccacaga-ccattgggggttagcttcacatcaatcataatcaacaaaaacaa 247625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 247904 - 247854
Alignment:
Q  11 atcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca 62  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  247904 atcatcatataaaatctccaaatccc-acatatgggcaaaatctcaataaca 247854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 6e-22; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 286
Target Start/End: Original strand, 25721 - 25901
Alignment:
Q  99 atcagagcctaatctaagactccaagaaa-cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||||||  ||||||||| ||| || ||||||||||||||| ||||||||| |||| | ||| |||||||||||||||| |||| ||| | || ||    
T  25721 atcagagcctatcctaagactctaaggaagcgataacggagatagctcccgctatccaaggaatcaccaagcaactcaccaaa-gcaa-ctaatcctgca 25818  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
      ||||||||||||||||||||| | |||||||||      || | |||||||||||||| || | ||||||||||||| |||||||||    
T  25819 cctcgtctacccatccatacagacatgtaggcggt------caaaaccactgggggtaagatttatatcaatcataatccacataaaca 25901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 331082 - 331026
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  331082 cgtctacccatccatacagacaggtaggcagtccatcacagatccactgggggtaag 331026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 286
Target Start/End: Original strand, 84588 - 84757
Alignment:
Q  99 atcagagcctaatctaagactccaag-aaacgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttca 197  Q
    |||||||| || |||||||||| ||| |||||||||||||||||| |||||||||            ||||||||||||| ||||| ||||| | || ||    
T  84588 atcagagcttattctaagactctaaggaaacgataacggagatagctcccgctat-----------ccaagcaactcacc-aaagc-aactaatcctgca 84674  T
Q  198 gttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
     ||||||||||||||||||||||  ||||||||||      || | |||||  |||||||||| ||||||||||||||| |||||||||    
T  84675 cttcgtctacccatccatacagacgggtaggcggt------caaaaccacttagggtaagctttacatcaatcataatccacataaaca 84757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 7384 - 7440
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7384 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 7440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 91079 - 91023
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  91079 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 91023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 332
Target Start/End: Complemental strand, 40380 - 40290
Alignment:
Q  244 ccactgggggtaagcttcacatcaatcataatc-aacataaacaaacataaaca-tgcaagaattcatgcataacacatatacataaccat 332  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||| |  | || ||||||||| ||||||||||||||||||    
T  40380 ccactaggggttagcttcacatcaatcataatcaaacataaacaatcataaacattataggatttcatgcatgacacatatacataaccat 40290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 86210 - 86154
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  86210 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 86154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 53420 - 53344
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||  | ||||||| |||||||||    
T  53420 cgtctacccatccaaacagataggcaggcggtccataacagatccactgggggtaagtattacatcaa-cataatcaa 53344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 58609 - 58537
Alignment:
Q  205 tacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||| |||||||||    
T  58609 tacccatccatacagataggcaggcggtccataacagatccactgggggtaagtattacatcaa-cataatcaa 58537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 278
Target Start/End: Complemental strand, 3685 - 3543
Alignment:
Q  128 cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtag 227  Q
    ||||||||||||||| ||||||||| |||| | ||| | |||||||||||||| |||| ||| |||| || |||||||||||||||||||||| | ||||    
T  3685 cgataacggagatagctcccgctatccaagcaatcaccgagcaactcaccaaa-gcaa-ctaattctgcacttcgtctacccatccatacagacatgtag 3588  T
Q  228 gcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||      || | |||||||||||||| || |||||||||||||||||    
T  3587 gcggt------caaaaccactgggggtaagttttacatcaatcataatcaa 3543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 121839 - 121728
Alignment:
Q  251 gggtaagcttcacatcaatcataatcaac-ataaacaaacataaacatgcaagaatt-catgcataacacatatacataaccatccctcgtagaatacta 348  Q
    |||| |||||||||||||||||||||||  |||||||| ||||| ||| |||||||| ||| |||| |||||||||||| || |||||| ||||||||||    
T  121839 gggttagcttcacatcaatcataatcaaatataaacaatcataagcattcaagaatttcatacatagcacatatacatacccgtccctcctagaatacta 121740  T
Q  349 gcatcacatgat 360  Q
     |||||||||||    
T  121739 acatcacatgat 121728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 110276 - 110200
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||||| || ||||||||  | ||||||||||||| ||||||||||| ||||||||  | ||||||| |||||||||    
T  110276 cgtctactcacccatacaggcaagtaggcggtccataacagatccactaggggtaagtattacatcaa-cataatcaa 110200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 326
Target Start/End: Original strand, 3603 - 3727
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacatgc 299  Q
    ||||||||||| |||||| |||| ||||||||||| |||| | ||||| ||||| ||||||||||| ||||||||||| |||| |||||||||| ||| |    
T  3603 cgtctacccattcatacaaatagttaggcggtccaccacata-ccactaggggttagcttcacatc-atcataatcaagcatagacaaacataagcattc 3700  T
Q  300 aagaattcatgcataacacatatacat 326  Q
    ||| |||| | ||||||||||||||||    
T  3701 aaggattcctacataacacatatacat 3727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 11964 - 12057
Alignment:
Q  80 cataaagaccaacgtcctaatcagagcctaatctaagactccaa--gaaacgataacggagataggtcccgctattcaagtagtcatcaagcaa 171  Q
    |||||| |||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||| |||| | ||| |||||||    
T  11964 cataaaaaccaacatcctaatcagagcctaatctaagactccaaaggaaacgacaacggagatagctcccgctatccaagcactcaccaagcaa 12057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 5341 - 5417
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  | ||||||| |||||||||    
T  5341 cgtctacccatccatacagataggcaggcggtccatcacagatccactaggggtaagtattacatcaa-cataatcaa 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 77540 - 77593
Alignment:
Q  204 ctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  77540 ctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 77593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 5923 - 6066
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||||||||||| ||||||||| |||| |  || |||||||||||||||| |||| |||   || || |||||||||||||||||||||| |||||    
T  5923 acgataacggagatagctcccgctatccaagaaaccaccaagcaactcaccaaa-gcaa-ctaaccctgcacttcgtctacccatccatacagacaggta 6020  T
Q  227 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||||      || | |||||||||||||| || |||||||||||||||||    
T  6021 ggcggt------caaaaccactgggggtaagatttacatcaatcataatcaa 6066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 2719 - 2663
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  2719 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 2663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 17674 - 17730
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  17674 cgtctacccatccatacagagaggtaggcggtccatcacagatccaatgggggtaag 17730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 30977 - 31033
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  30977 cgtctacccatccatacagacaggtaggcggtccatcacagatccacttggggtaag 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 27889 - 27945
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  27889 cgtctacccatccatacagacaggtaggcggtccatcatagatccactgggggtaag 27945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 56145 - 56201
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  56145 cgtctacccatccatacagacaggtaggcggtccatcacagatccactaggggtaag 56201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 21405 - 21349
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  21405 cgtctacccatccatacagatatgcaggcggtccatcacagatccactgggggtaag 21349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 5160 - 5216
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5160 cgtctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 5216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 16711 - 16765
Alignment:
Q  203 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16711 tctacccatccatacagataggcaggcggtccataacagatccactgggggtaag 16765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 16317 - 16371
Alignment:
Q  203 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  16317 tctacccatccatacagataggcaggcggtccatcacagatccacttggggtaag 16371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 22981 - 23035
Alignment:
Q  203 tctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  22981 tctacccatccatacagataggcaggcggtccatcacagatccacttggggtaag 23035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 30589 - 30670
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataa 283  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||    
T  30589 cgtctaccaatccatacagacaggcaggcggtccatcacagatccactgggggtaagtattacatc-atcataatccacataa 30670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 1002 - 1078
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||  | ||||||| |||||||||    
T  1002 cgtctacccatccaaacagataggcaggcggtccataacagatccactgggggtaagtattacatcaa-cataatcaa 1078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 13190 - 13114
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||  | ||||||| |||||||||    
T  13190 cgtctacccatccatacagataggcaggcggtccataacagatccactggcggtaagtattacatcaa-cataatcaa 13114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 31059 - 31115
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||    
T  31059 cgtctacccatccatacagataggcaggcggtccataaaagatccactaggggtaag 31115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 166476 - 166400
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||  | ||||||| |||||||||    
T  166476 cgtctacccatccatacagataggcaagcggtccataacagatccactgggggtaagtattacatcaa-cataatcaa 166400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 167014 - 166969
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatcca 246  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||    
T  167014 cgtctacccatccatacagataggcatgcggtccataacagatcca 166969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 2414 - 2470
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  2414 cgtctacccacccatacagacaggtaggcggtccatcacagatccactcggggtaag 2470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 267 - 323
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  267 cgtctacccatccatacagataggcaggcggtccataacagatccactaggggtaag 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 5278 - 5334
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  5278 cgtctacccacccatacagacaggtaggcggtccatcacagatccactcggggtaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 10183 - 10127
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||    
T  10183 cgtctacccatccatacaaataggtaggcggtccatcacagatccattgtgggtaag 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 220 - 276
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  220 cgtctacccatccatatagataggcaggcggtccataacagatccactgggggtaag 276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 2995 - 3046
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  2995 cgtctacccatccatacaggcaggcaggcggtccatcacagatccactgggg 3046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 15300 - 15244
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15300 cgtctacctatccatacagataggcaggcggtccataacagatccactgggggtaag 15244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 94206 - 94262
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  94206 cgtctacccatccatacaaacaggtaggcggtccatcacagatccactaggggtaag 94262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 27107 - 27159
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactggggg 253  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  27107 cgtctacccatccatacagataggcaagcggtccatcacagatccactggggg 27159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 128 - 278
Target Start/End: Original strand, 36093 - 36235
Alignment:
Q  128 cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtag 227  Q
    ||||||||||||||| ||||||||| |||| | ||| | ||||||||||| ||||| ||||| | || || |||||||||||||||||||||| | ||||    
T  36093 cgataacggagatagctcccgctatccaagcaatcaccgagcaactcacc-aaagc-aactaatcctgcacttcgtctacccatccatacagaaatgtag 36190  T
Q  228 gcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||      || | |||||| | |||||||| |||||||||||||||||    
T  36191 gcggt------caaaaccactgagagtaagctttacatcaatcataatcaa 36235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 286
Target Start/End: Original strand, 4101 - 4289
Alignment:
Q  95 cctaatcagagcctaatctaagactccaa-gaaacgataacggagat-aggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaa-ctagt 191  Q
    |||||| ||| ||||||||||||||| || ||| |||||| |||||| || ||||||||| |||  | ||| ||||||||||||| |||||||| ||| |    
T  4101 cctaattagaccctaatctaagactctaaagaaccgataatggagattagctcccgctatccaaacaatcaccaagcaactcaccgaaagcaaaactact 4200  T
Q  192 tcttcagttcgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
     || || | ||| ||||||| |||||| | |||||||| |||      ||| ||||||||||| ||||| |||||||||||||||| ||||||||    
T  4201 cctgcactccgtttacccattcatacaaacaggtaggcagtc------agaaccactgggggttagctttacatcaatcataatcatcataaaca 4289  T

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Target: scaffold0219 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 25947 - 25805
Alignment:
Q  127 acgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggta 226  Q
    |||||||||||||||| ||||||||| |||| |  || |||||||||||||||||   |||||  ||| || |||||||||||||||||||  | |||||    
T  25947 acgataacggagatagctcccgctatccaagcaaccaccaagcaactcaccaaaa--caactaactctgcacttcgtctacccatccataccaacaggta 25850  T
Q  227 ggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    ||||||      || | ||||| ||||||||||| |||||||||||||||||    
T  25849 ggcggt------caaaaccact-ggggtaagctttacatcaatcataatcaa 25805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 8645 - 8709
Alignment:
Q  213 catacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||| |||||||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||    
T  8645 catacaaataggtaggcggtccaccacaga-ccattgggggttagcttcacatcaatcataatcaa 8709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 8775 - 8816
Alignment:
Q  319 atatacataaccatccctcgtagaatactagcatcacatgat 360  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  8775 atatatataaccatccctcctagaatactagcatcacatgat 8816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 743 - 799
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||| ||||||||||||||| || |||||||| ||||||||||||||||||||    
T  743 cgtctacctatccatacagataggcagacggtccataacagatccactgggggtaag 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 4892 - 4836
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||    
T  4892 cgtctacccatccatacagataggcagtcggtccatcacagatctactaggggtaag 4836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 509 - 453
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  509 cgtctacctatccatacagataggcaggcggtccataacagatccactaggggtaag 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 8331 - 8447
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataaca-aataaatccaacaaagacataaagaccaacgtccta-atcagagc 106  Q
    |||||| |||||||| ||||||||||||||||||||||||| ||||||| | || ||| |||| |  | | ||||||||||  || ||||| ||||||||    
T  8331 acatcaccatataaaatctccaaatcccgacatatgggtaatatctcaacatcacaatcaatctagaataaacataaagacatacatcctagatcagagc 8430  T
Q  107 ctaatctaagactccaa 123  Q
    ||| |||||||||||||    
T  8431 ctactctaagactccaa 8447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 8521 - 8596
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatca 277  Q
    ||||||||||| | |||| |||||||| ||||||| |||| | || |||||||| ||||| ||||||||||||||||    
T  8521 cgtctacccattcgtacaaataggtagtcggtccaccacaaaccc-ctgggggttagcttgacatcaatcataatca 8596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 26390 - 26446
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| || |||||    
T  26390 cgtctacccatccatacagacaggcaggcggtccatcacagatccacttggagtaag 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 18694 - 18735
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  18694 acatcatcataaaaattctccaaatcccgacaaatgggtaaa 18735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 18894 - 18928
Alignment:
Q  199 ttcgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||||| ||||||||||||    
T  18894 ttcgtctacccatccatacagacaggtaggcggtc 18928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 24335 - 24303
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  24335 cgtctacccatccatacagacaggtaggcggtc 24303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 49732 - 49676
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||    
T  49732 cgtctacccatccatacagataggcagtcggtccatcacagatctactaggggtaag 49676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 24636 - 24580
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  24636 cgtctacccatccatacagacatgtaggcggtccatcacaaatccacttggggtaag 24580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 13150 - 13103
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccact 248  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  13150 cgtctacccatccatacagataggcaggcggtccataacagatccact 13103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 1598 - 1630
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  1598 cgtctacccatccatacagacaggtaggcggtc 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 327
Target Start/End: Complemental strand, 64405 - 64281
Alignment:
Q  202 gtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa-cataaacaaacataaacatgca 300  Q
    |||||||||| |||||| |||||||||||||| | || |   |||||| || || |||||||| || |||||||||| ||||||||| | ||||||| ||    
T  64405 gtctacccattcatacaaataggtaggcggtcaaccaaacgaccactgcggtta-gcttcacaaca-tcataatcaagcataaacaagcttaaacattca 64308  T
Q  301 agaattcatgcataacacatatacata 327  Q
    || ||||||||| ||||||||||||||    
T  64307 aggattcatgcacaacacatatacata 64281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 29369 - 29448
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaaca 286  Q
    |||||||| |||||||||||||||||||||||| |      | ||||||||||||||| | ||||||||||||||| |||||||||    
T  29369 cgtctacctatccatacagataggtaggcggtcaa------aaccactgggggtaagcattacatcaatcataatccacataaaca 29448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 3144 - 3088
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||||||| |||||||||||| || |||||||| ||||||||||| ||||||||    
T  3144 cgtctacccatacatacagataggcagacggtccataacagatccactaggggtaag 3088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 278
Target Start/End: Original strand, 104151 - 104293
Alignment:
Q  128 cgataacggagataggtcccgctattcaagtagtcatcaagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtag 227  Q
    ||||| ||||||||| ||||| ||| |||| |  || ||||||||||||| || |||| ||| | |||||  ||||||||||||||||||||| ||||||    
T  104151 cgataccggagatagctcccgatatccaagcaagcaccaagcaactcaccgaa-gcaa-ctaatccttcacgtcgtctacccatccatacagacaggtag 104248  T
Q  228 gcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||      || | |||||||  |||||||| |||||||||||||||||    
T  104249 gcggt------caaaaccactggaagtaagctttacatcaatcataatcaa 104293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 6995 - 6954
Alignment:
Q  9 acatcatcatataaattctccaaatcccgacatatgggtaaa 50  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  6995 acatcatcataaaaattctccaaatcccgacaaatgggtaaa 6954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 20385 - 20459
Alignment:
Q  199 ttcgtctacccatccatacagataggtaggcggtccatcacagatccact-gggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||||| |||||||||||       | ||||||| |||||||||||| |||||||||||||||||    
T  20385 ttcgtctacccatccatacagacaggtaggcggt------aaaatccactggggggtaagctttacatcaatcataatcaa 20459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 1917 - 1851
Alignment:
Q  165 caagcaactcaccaaaagcaaactagttcttcagttcgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||| |||| ||| | || || |||||||||| ||||||||||||||||||||||||    
T  1917 caagcaactcaccaaa-gcaa-ctaatcctgcacttcgtctacctatccatacagataggtaggcggtc 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 4014 - 4058
Alignment:
Q  208 ccatccatacagataggtaggcggtccatcacagatccactgggg 252  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||||    
T  4014 ccatccataaagaaaggtaggcggtccatcactgatccactgggg 4058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 99100 - 99023
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaacataaa 284  Q
    |||||||||||||||||||| |||||||||||      || | ||||||||||||| | | ||||||||||||||| |||||||    
T  99100 cgtctacccatccatacagacaggtaggcggt------caaaaccactgggggtaaacattacatcaatcataatccacataaa 99023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 28521 - 28556
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccat 236  Q
    |||||||||||||||||||||||| |||||||||||    
T  28521 cgtctacccatccatacagataggcaggcggtccat 28556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 232
Target Start/End: Original strand, 40924 - 40955
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggt 232  Q
    ||||||||||||||||||||||||||||||||    
T  40924 cgtctacccatccatacagataggtaggcggt 40955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 16683 - 16636
Alignment:
Q  310 gcataacacatatacataaccatccctcgtagaatactagcatcacat 357  Q
    ||||||||||||||||||| |||||||   ||||||||||||||||||    
T  16683 gcataacacatatacataatcatcccttccagaatactagcatcacat 16636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 16789 - 16749
Alignment:
Q  14 atcatataaattctccaaatcccgacatatgggtaaaatct 54  Q
    |||||||||| |||||| ||||||||| |||||||||||||    
T  16789 atcatataaaatctccacatcccgacaaatgggtaaaatct 16749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 1514 - 1585
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaagcttcacatcaatcataatcaa 278  Q
    |||||||||||||||||||| |||||||||||      || | ||||| ||||||||| | |||||||||||||||||    
T  1514 cgtctacccatccatacagacaggtaggcggt------caaaaccactaggggtaagcattacatcaatcataatcaa 1585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 853 - 886
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  853 tcgtctacccatccatacagacaggtaggcggtc 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 6836 - 6869
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  6836 tcgtctacccatccatacagacaggtaggcggtc 6869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 114206 - 114173
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||||||||| ||||||||||||||    
T  114206 tcgtctacccatccatacaaataggtaggcggtc 114173  T

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Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 130146 - 130179
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  130146 tcgtctacccatccatacagacaggtaggcggtc 130179  T

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Target: scaffold0786 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 5009 - 5041
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  5009 cgtctacccatccatacagacaggtaggcggtc 5041  T

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Target: scaffold0507 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 5310 - 5278
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  5310 cgtctacccatccatacagacaggtaggcggtc 5278  T

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Target: scaffold0503 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 9629 - 9661
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  9629 cgtctacccatccatacagacaggtaggcggtc 9661  T

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Target: scaffold0434 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 2852 - 2884
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  2852 cgtctacccatccatacagacaggtaggcggtc 2884  T

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Target: scaffold0390 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 3542 - 3574
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  3542 cgtctacccatccatacagacaggtaggcggtc 3574  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 6927 - 6959
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  6927 cgtctacccatccatacagacaggtaggcggtc 6959  T

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Target: scaffold0151 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 31555 - 31523
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  31555 cgtctacccatccatacagacaggtaggcggtc 31523  T

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Target: scaffold0125 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 29577 - 29633
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 257  Q
    ||||||| || ||||||||  | ||||||||||||| |||||||||| |||||||||    
T  29577 cgtctactcacccatacaggcaagtaggcggtccataacagatccaccgggggtaag 29633  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 7244 - 7276
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  7244 cgtctacccatccatacagacaggtaggcggtc 7276  T

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Target: scaffold0102 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 45873 - 45841
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  45873 cgtctacccatccatacagacaggtaggcggtc 45841  T

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Target: scaffold0080 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 25519 - 25487
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    ||||||| |||||||||||||||||||||||||    
T  25519 cgtctacgcatccatacagataggtaggcggtc 25487  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 59810 - 59842
Alignment:
Q  201 cgtctacccatccatacagataggtaggcggtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  59810 cgtctacccatccatacagacaggtaggcggtc 59842  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 76532 - 76564
Alignment:
Q  200 tcgtctacccatccatacagataggtaggcggt 232  Q
    ||||||||||||||||||||||||||| |||||    
T  76532 tcgtctacccatccatacagataggtacgcggt 76564  T

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