View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7909_high_16 (Length: 264)
Name: NF7909_high_16
Description: NF7909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7909_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 49126198 - 49126426
Alignment:
| Q |
9 |
tcagccagagagtctgtgtaaaagctacaaaatcttagttgtctgttacatgcgtttagatgttccaagcaaggatttcttatatcaaaattcagtagct |
108 |
Q |
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| T |
49126198 |
tcagtcagagagtctgtgtaaaagctacaaaatcttagttgtctgttacatgcgtttagatgttccaagcaaggatttcttatatcaaaattcagtagct |
49126297 |
T |
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| Q |
109 |
gttacataggctttttgacagacggagttagcgataaggtccaaaactgaaacattttcataaatgagaaacccaaatgtga---gnnnnnnnntgaaaa |
205 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
49126298 |
gttacataggctttttgacagacggagttagctataaggtccaaaactgaaacattttcataaatgagaaacccaaatgtgaaagaaaaaaaaatgaaaa |
49126397 |
T |
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| Q |
206 |
ttatcatattttgagggacaacagacata |
234 |
Q |
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|||||||||||||||||||||| |||||| |
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| T |
49126398 |
ttatcatattttgagggacaacggacata |
49126426 |
T |
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