View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7909_low_28 (Length: 201)

Name: NF7909_low_28
Description: NF7909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7909_low_28
NF7909_low_28
[»] scaffold0692 (1 HSPs)
scaffold0692 (10-189)||(3198-3377)
[»] scaffold0225 (1 HSPs)
scaffold0225 (10-189)||(24198-24377)
[»] scaffold0076 (2 HSPs)
scaffold0076 (10-189)||(41062-41241)
scaffold0076 (20-135)||(56277-56392)
[»] chr7 (31 HSPs)
chr7 (10-189)||(27107103-27107282)
chr7 (10-186)||(7824662-7824838)
chr7 (10-189)||(45147314-45147493)
chr7 (10-186)||(14937109-14937285)
chr7 (10-186)||(15364702-15364878)
chr7 (10-186)||(13455509-13455685)
chr7 (10-186)||(17924413-17924589)
chr7 (10-189)||(4440690-4440869)
chr7 (10-189)||(21673862-21674041)
chr7 (54-189)||(13353956-13354091)
chr7 (12-189)||(23642212-23642387)
chr7 (10-189)||(17144590-17144769)
chr7 (20-135)||(13022130-13022245)
chr7 (15-133)||(13666305-13666423)
chr7 (15-135)||(19147979-19148099)
chr7 (15-135)||(20747378-20747498)
chr7 (20-135)||(12457413-12457528)
chr7 (20-135)||(15341204-15341319)
chr7 (15-135)||(11305624-11305744)
chr7 (15-135)||(13968029-13968149)
chr7 (15-135)||(26117966-26118086)
chr7 (15-94)||(40570-40649)
chr7 (81-135)||(16699-16753)
chr7 (15-113)||(18053336-18053434)
chr7 (15-113)||(23505253-23505351)
chr7 (15-135)||(15101964-15102084)
chr7 (84-135)||(8211489-8211540)
chr7 (81-135)||(8708438-8708492)
chr7 (40-113)||(15123261-15123334)
chr7 (81-121)||(9596890-9596930)
chr7 (83-135)||(15154040-15154092)
[»] chr6 (29 HSPs)
chr6 (10-189)||(16381838-16382017)
chr6 (10-189)||(23027181-23027360)
chr6 (10-189)||(1648279-1648458)
chr6 (12-189)||(18572290-18572467)
chr6 (10-189)||(14624822-14625001)
chr6 (12-189)||(18837373-18837550)
chr6 (10-189)||(15077831-15078010)
chr6 (10-189)||(16098687-16098866)
chr6 (10-189)||(16233665-16233844)
chr6 (10-189)||(23996885-23997064)
chr6 (10-186)||(21927842-21928018)
chr6 (118-189)||(35275551-35275622)
chr6 (15-181)||(15459978-15460144)
chr6 (81-135)||(19865395-19865449)
chr6 (81-121)||(27566513-27566553)
chr6 (81-123)||(16962976-16963018)
chr6 (81-135)||(22078209-22078263)
chr6 (15-113)||(28282354-28282452)
chr6 (20-133)||(19879945-19880058)
chr6 (15-135)||(5296725-5296845)
chr6 (15-135)||(24365054-24365174)
chr6 (81-133)||(27330954-27331006)
chr6 (81-133)||(27391694-27391746)
chr6 (36-135)||(10468368-10468467)
chr6 (24-127)||(19435653-19435756)
chr6 (81-135)||(5838738-5838792)
chr6 (81-123)||(18407473-18407515)
chr6 (81-135)||(20636820-20636874)
chr6 (15-113)||(27560158-27560256)
[»] chr5 (27 HSPs)
chr5 (10-189)||(21936690-21936869)
chr5 (10-189)||(24581897-24582076)
chr5 (12-189)||(27011773-27011950)
chr5 (10-189)||(23504129-23504308)
chr5 (35-189)||(25243852-25244006)
chr5 (35-189)||(25308004-25308158)
chr5 (10-178)||(19566202-19566370)
chr5 (15-135)||(20342974-20343094)
chr5 (15-135)||(37542937-37543057)
chr5 (15-134)||(22462644-22462763)
chr5 (8-162)||(16065304-16065458)
chr5 (15-109)||(17268916-17269010)
chr5 (81-135)||(18776546-18776600)
chr5 (81-135)||(23574513-23574567)
chr5 (20-181)||(20822150-20822311)
chr5 (15-135)||(22503371-22503491)
chr5 (81-133)||(23440986-23441038)
chr5 (15-135)||(25848767-25848887)
chr5 (15-134)||(20774451-20774570)
chr5 (81-135)||(21881725-21881779)
chr5 (15-135)||(14886547-14886667)
chr5 (81-121)||(23517302-23517342)
chr5 (15-135)||(24797953-24798073)
chr5 (15-134)||(28894499-28894618)
chr5 (15-134)||(28915970-28916089)
chr5 (15-134)||(28923325-28923444)
chr5 (81-135)||(25423965-25424019)
[»] chr3 (39 HSPs)
chr3 (10-189)||(30138208-30138387)
chr3 (10-189)||(30147759-30147938)
chr3 (10-189)||(13966899-13967078)
chr3 (10-189)||(17193496-17193675)
chr3 (12-189)||(6152410-6152587)
chr3 (10-189)||(8273958-8274137)
chr3 (10-189)||(16257546-16257725)
chr3 (10-189)||(16742262-16742441)
chr3 (34-189)||(6711968-6712123)
chr3 (21-189)||(18749078-18749246)
chr3 (37-187)||(15095434-15095584)
chr3 (58-189)||(15610554-15610684)
chr3 (10-136)||(266907-267033)
chr3 (81-135)||(15062207-15062261)
chr3 (81-135)||(16371876-16371930)
chr3 (15-127)||(17493037-17493149)
chr3 (15-134)||(10419648-10419767)
chr3 (15-133)||(12498645-12498763)
chr3 (15-113)||(44777654-44777752)
chr3 (15-135)||(10384375-10384495)
chr3 (15-135)||(28754725-28754845)
chr3 (15-135)||(47124351-47124471)
chr3 (15-134)||(14574330-14574449)
chr3 (15-113)||(4678845-4678943)
chr3 (15-113)||(13942431-13942529)
chr3 (81-135)||(16491794-16491848)
chr3 (81-135)||(16692627-16692681)
chr3 (81-135)||(16806539-16806593)
chr3 (15-133)||(18133950-18134068)
chr3 (15-113)||(41177929-41178027)
chr3 (10-63)||(15577152-15577205)
chr3 (15-135)||(9523116-9523236)
chr3 (15-135)||(11960771-11960891)
chr3 (15-135)||(15209288-15209408)
chr3 (20-56)||(16380609-16380645)
chr3 (81-120)||(14126222-14126261)
chr3 (15-113)||(8758706-8758804)
chr3 (81-135)||(14876111-14876165)
chr3 (81-135)||(17490313-17490367)
[»] chr2 (24 HSPs)
chr2 (10-189)||(23816903-23817082)
chr2 (10-189)||(24569528-24569707)
chr2 (10-184)||(24831052-24831226)
chr2 (20-189)||(22761429-22761598)
chr2 (13-189)||(12640093-12640269)
chr2 (10-189)||(22276682-22276861)
chr2 (10-186)||(25129051-25129227)
chr2 (10-189)||(21906029-21906208)
chr2 (81-135)||(23107644-23107698)
chr2 (15-135)||(1064160-1064280)
chr2 (15-135)||(11357788-11357908)
chr2 (15-135)||(24642151-24642271)
chr2 (81-135)||(22756379-22756433)
chr2 (15-133)||(23294344-23294462)
chr2 (81-121)||(21325194-21325234)
chr2 (81-133)||(24707398-24707450)
chr2 (15-113)||(12574762-12574860)
chr2 (15-113)||(27788150-27788248)
chr2 (81-133)||(21890634-21890686)
chr2 (15-135)||(31831067-31831187)
chr2 (81-135)||(23066866-23066920)
chr2 (81-133)||(30210832-30210884)
chr2 (81-121)||(41608313-41608353)
chr2 (81-133)||(45529986-45530038)
[»] chr1 (14 HSPs)
chr1 (10-189)||(20830784-20830963)
chr1 (12-189)||(22134949-22135126)
chr1 (21-189)||(21201683-21201849)
chr1 (15-132)||(19855098-19855215)
chr1 (15-135)||(20835334-20835454)
chr1 (15-135)||(21951702-21951822)
chr1 (15-135)||(31539443-31539563)
chr1 (15-65)||(22432632-22432682)
chr1 (15-135)||(20295205-20295325)
chr1 (81-133)||(21749800-21749852)
chr1 (15-134)||(20856208-20856327)
chr1 (15-133)||(20939511-20939629)
chr1 (81-135)||(22361690-22361744)
chr1 (82-135)||(16078102-16078155)
[»] scaffold0302 (1 HSPs)
scaffold0302 (10-189)||(5979-6158)
[»] scaffold0117 (1 HSPs)
scaffold0117 (12-189)||(747-924)
[»] scaffold0077 (2 HSPs)
scaffold0077 (10-189)||(27589-27768)
scaffold0077 (15-135)||(20818-20938)
[»] scaffold0066 (1 HSPs)
scaffold0066 (12-189)||(46960-47137)
[»] scaffold0008 (2 HSPs)
scaffold0008 (21-189)||(24695-24863)
scaffold0008 (21-173)||(232370-232522)
[»] scaffold0567 (1 HSPs)
scaffold0567 (10-189)||(10098-10277)
[»] scaffold0266 (1 HSPs)
scaffold0266 (12-186)||(9187-9361)
[»] scaffold0028 (1 HSPs)
scaffold0028 (11-189)||(105896-106074)
[»] scaffold0162 (1 HSPs)
scaffold0162 (12-189)||(13714-13891)
[»] chr4 (19 HSPs)
chr4 (12-189)||(9291610-9291787)
chr4 (10-189)||(15292478-15292657)
chr4 (12-189)||(14998091-14998268)
chr4 (12-189)||(13248420-13248597)
chr4 (20-189)||(12342185-12342353)
chr4 (33-189)||(16028907-16029063)
chr4 (33-133)||(38811703-38811803)
chr4 (20-135)||(20891765-20891880)
chr4 (15-135)||(11206605-11206725)
chr4 (15-121)||(14691680-14691786)
chr4 (81-119)||(15147015-15147053)
chr4 (15-135)||(3264168-3264288)
chr4 (15-135)||(15078413-15078533)
chr4 (15-135)||(15246702-15246822)
chr4 (81-135)||(18226560-18226614)
chr4 (81-115)||(16354579-16354613)
chr4 (15-129)||(44661246-44661360)
chr4 (81-134)||(12524520-12524573)
chr4 (15-135)||(33223701-33223821)
[»] chr8 (34 HSPs)
chr8 (21-189)||(20652096-20652264)
chr8 (10-189)||(16876858-16877037)
chr8 (10-189)||(21196265-21196444)
chr8 (10-189)||(21850100-21850279)
chr8 (10-189)||(23156775-23156954)
chr8 (10-189)||(22316030-22316209)
chr8 (10-157)||(22983272-22983419)
chr8 (12-189)||(25282971-25283148)
chr8 (20-189)||(25283205-25283374)
chr8 (10-189)||(22283843-22284022)
chr8 (34-114)||(23901138-23901218)
chr8 (12-135)||(22366482-22366605)
chr8 (81-135)||(19978877-19978931)
chr8 (83-135)||(21166355-21166407)
chr8 (81-141)||(21251851-21251911)
chr8 (15-135)||(22061250-22061370)
chr8 (20-135)||(12305607-12305722)
chr8 (81-115)||(16407883-16407917)
chr8 (81-135)||(21393682-21393736)
chr8 (81-135)||(21788176-21788230)
chr8 (81-135)||(30312961-30313015)
chr8 (15-133)||(31416293-31416411)
chr8 (15-113)||(31570681-31570779)
chr8 (15-135)||(803490-803610)
chr8 (15-135)||(6604502-6604622)
chr8 (15-135)||(6679955-6680075)
chr8 (15-135)||(16271041-16271161)
chr8 (81-133)||(21043355-21043407)
chr8 (83-135)||(22040771-22040823)
chr8 (12-72)||(22365694-22365754)
chr8 (15-135)||(22371784-22371904)
chr8 (84-135)||(27355461-27355512)
chr8 (15-56)||(22051707-22051748)
chr8 (81-121)||(15534290-15534330)
[»] scaffold0369 (1 HSPs)
scaffold0369 (10-189)||(266-445)
[»] scaffold0310 (1 HSPs)
scaffold0310 (10-189)||(14060-14239)
[»] scaffold0207 (1 HSPs)
scaffold0207 (10-189)||(18851-19030)
[»] scaffold0021 (3 HSPs)
scaffold0021 (10-189)||(71993-72172)
scaffold0021 (10-189)||(32736-32915)
scaffold0021 (10-189)||(24767-24945)
[»] scaffold0218 (1 HSPs)
scaffold0218 (12-189)||(3267-3444)
[»] scaffold0589 (1 HSPs)
scaffold0589 (10-189)||(9790-9969)
[»] scaffold0554 (1 HSPs)
scaffold0554 (14-189)||(3966-4141)
[»] scaffold0047 (1 HSPs)
scaffold0047 (10-189)||(453-632)
[»] scaffold0132 (2 HSPs)
scaffold0132 (12-189)||(15462-15639)
scaffold0132 (10-76)||(44342-44408)
[»] scaffold0023 (2 HSPs)
scaffold0023 (21-189)||(55223-55391)
scaffold0023 (81-135)||(28749-28803)
[»] scaffold0808 (1 HSPs)
scaffold0808 (15-186)||(380-551)
[»] scaffold0011 (2 HSPs)
scaffold0011 (21-173)||(180739-180891)
scaffold0011 (15-133)||(195083-195201)
[»] scaffold0610 (1 HSPs)
scaffold0610 (10-189)||(8213-8392)
[»] scaffold0876 (1 HSPs)
scaffold0876 (21-189)||(3357-3525)
[»] scaffold0327 (1 HSPs)
scaffold0327 (34-189)||(7997-8152)
[»] scaffold0243 (1 HSPs)
scaffold0243 (12-189)||(296-470)
[»] scaffold0235 (3 HSPs)
scaffold0235 (12-189)||(26612-26789)
scaffold0235 (15-127)||(10842-10954)
scaffold0235 (15-127)||(21056-21168)
[»] scaffold0124 (2 HSPs)
scaffold0124 (10-189)||(7131-7311)
scaffold0124 (15-133)||(13007-13125)
[»] scaffold0160 (1 HSPs)
scaffold0160 (10-189)||(8069-8248)
[»] scaffold0091 (1 HSPs)
scaffold0091 (21-127)||(45312-45418)
[»] scaffold0058 (2 HSPs)
scaffold0058 (51-189)||(75403-75541)
scaffold0058 (15-135)||(19929-20049)
[»] scaffold0205 (1 HSPs)
scaffold0205 (34-189)||(9390-9545)
[»] scaffold0120 (1 HSPs)
scaffold0120 (112-189)||(23082-23159)
[»] scaffold0387 (1 HSPs)
scaffold0387 (9-96)||(14941-15028)
[»] scaffold0367 (1 HSPs)
scaffold0367 (15-133)||(6617-6735)
[»] scaffold0203 (1 HSPs)
scaffold0203 (15-133)||(13678-13796)
[»] scaffold0081 (2 HSPs)
scaffold0081 (81-135)||(19477-19531)
scaffold0081 (81-135)||(34901-34955)
[»] scaffold0067 (3 HSPs)
scaffold0067 (15-133)||(51559-51677)
scaffold0067 (15-133)||(60593-60711)
scaffold0067 (15-133)||(66981-67099)
[»] scaffold0017 (1 HSPs)
scaffold0017 (81-135)||(196855-196909)
[»] scaffold0708 (1 HSPs)
scaffold0708 (15-135)||(7522-7642)
[»] scaffold0020 (2 HSPs)
scaffold0020 (15-135)||(100929-101049)
scaffold0020 (81-135)||(181074-181128)
[»] scaffold0005 (2 HSPs)
scaffold0005 (81-121)||(278221-278261)
scaffold0005 (15-135)||(261117-261237)
[»] scaffold0501 (1 HSPs)
scaffold0501 (81-135)||(3069-3123)
[»] scaffold0483 (1 HSPs)
scaffold0483 (15-121)||(12303-12409)
[»] scaffold0298 (3 HSPs)
scaffold0298 (15-133)||(11436-11554)
scaffold0298 (15-133)||(15206-15324)
scaffold0298 (20-113)||(20797-20890)
[»] scaffold0198 (1 HSPs)
scaffold0198 (81-135)||(24373-24427)
[»] scaffold0042 (1 HSPs)
scaffold0042 (15-121)||(39211-39317)
[»] scaffold0034 (1 HSPs)
scaffold0034 (15-133)||(4332-4450)
[»] scaffold1646 (1 HSPs)
scaffold1646 (15-135)||(133-253)
[»] scaffold0324 (1 HSPs)
scaffold0324 (81-134)||(19380-19433)
[»] scaffold0126 (1 HSPs)
scaffold0126 (20-133)||(41731-41844)
[»] scaffold2094 (1 HSPs)
scaffold2094 (15-135)||(439-558)
[»] scaffold0228 (1 HSPs)
scaffold0228 (81-189)||(571-679)
[»] scaffold0192 (1 HSPs)
scaffold0192 (15-135)||(27333-27453)
[»] scaffold0114 (2 HSPs)
scaffold0114 (15-127)||(44314-44426)
scaffold0114 (15-127)||(45326-45438)
[»] scaffold0106 (1 HSPs)
scaffold0106 (15-135)||(14848-14968)
[»] scaffold0046 (1 HSPs)
scaffold0046 (15-135)||(81209-81329)
[»] scaffold0012 (1 HSPs)
scaffold0012 (81-133)||(229918-229970)
[»] scaffold0010 (1 HSPs)
scaffold0010 (15-135)||(41710-41830)
[»] scaffold0249 (1 HSPs)
scaffold0249 (20-135)||(1349-1464)
[»] scaffold0190 (1 HSPs)
scaffold0190 (20-135)||(32696-32811)
[»] scaffold0742 (1 HSPs)
scaffold0742 (15-109)||(6022-6116)
[»] scaffold0676 (1 HSPs)
scaffold0676 (81-135)||(6889-6943)
[»] scaffold0546 (1 HSPs)
scaffold0546 (81-135)||(3782-3836)
[»] scaffold0540 (1 HSPs)
scaffold0540 (81-135)||(7708-7762)
[»] scaffold0375 (1 HSPs)
scaffold0375 (81-123)||(3203-3245)
[»] scaffold0293 (1 HSPs)
scaffold0293 (81-135)||(13343-13397)
[»] scaffold0222 (1 HSPs)
scaffold0222 (15-133)||(7869-7987)
[»] scaffold0156 (1 HSPs)
scaffold0156 (15-133)||(28034-28152)
[»] scaffold0109 (2 HSPs)
scaffold0109 (81-135)||(9471-9525)
scaffold0109 (81-135)||(32950-33004)
[»] scaffold0044 (1 HSPs)
scaffold0044 (81-135)||(15235-15289)
[»] scaffold0031 (1 HSPs)
scaffold0031 (81-135)||(63408-63462)
[»] scaffold0093 (1 HSPs)
scaffold0093 (84-133)||(27139-27188)
[»] scaffold0026 (1 HSPs)
scaffold0026 (81-138)||(29820-29877)
[»] scaffold0396 (1 HSPs)
scaffold0396 (15-135)||(4840-4960)
[»] scaffold0239 (1 HSPs)
scaffold0239 (20-56)||(12241-12277)
[»] scaffold0213 (1 HSPs)
scaffold0213 (15-135)||(5712-5832)
[»] scaffold0101 (1 HSPs)
scaffold0101 (15-135)||(4829-4949)
[»] scaffold0465 (1 HSPs)
scaffold0465 (15-134)||(612-731)
[»] scaffold1602 (1 HSPs)
scaffold1602 (81-135)||(1444-1498)
[»] scaffold0621 (1 HSPs)
scaffold0621 (81-135)||(2342-2396)
[»] scaffold0403 (1 HSPs)
scaffold0403 (15-133)||(7181-7299)
[»] scaffold0358 (1 HSPs)
scaffold0358 (81-135)||(6924-6978)
[»] scaffold0333 (1 HSPs)
scaffold0333 (81-135)||(16530-16584)
[»] scaffold0284 (1 HSPs)
scaffold0284 (81-135)||(22742-22796)
[»] scaffold0111 (1 HSPs)
scaffold0111 (9-67)||(3364-3422)
[»] scaffold0079 (1 HSPs)
scaffold0079 (81-115)||(25849-25883)
[»] scaffold0053 (1 HSPs)
scaffold0053 (15-65)||(57294-57344)
[»] scaffold0029 (1 HSPs)
scaffold0029 (20-134)||(95380-95494)
[»] scaffold0001 (1 HSPs)
scaffold0001 (81-135)||(390577-390631)
[»] scaffold1355 (1 HSPs)
scaffold1355 (81-134)||(1551-1604)
[»] scaffold0348 (1 HSPs)
scaffold0348 (15-56)||(6993-7034)
[»] scaffold0145 (1 HSPs)
scaffold0145 (81-134)||(39389-39442)
[»] scaffold0071 (1 HSPs)
scaffold0071 (20-65)||(48654-48699)
[»] scaffold0518 (1 HSPs)
scaffold0518 (15-127)||(11578-11690)
[»] scaffold0507 (1 HSPs)
scaffold0507 (15-135)||(9779-9899)
[»] scaffold0220 (1 HSPs)
scaffold0220 (81-121)||(214-254)


Alignment Details
Target: scaffold0692 (Bit Score: 144; Significance: 6e-76; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 3377 - 3198
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  3377 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 3278  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  3277 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 3198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 144; Significance: 6e-76; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 24198 - 24377
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  24198 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 24297  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  24298 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 24377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 144; Significance: 6e-76; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 41062 - 41241
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  41062 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 41161  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  41162 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 41241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 56392 - 56277
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    |||||||||||||||||| ||||||||||| || |||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||  ||||    
T  56392 atccatagaaatgctatctcacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaagtcaaa 56293  T
Q  120 caagcataaacaaact 135  Q
    || ||||| |||||||    
T  56292 catgcatacacaaact 56277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 6e-76; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 27107282 - 27107103
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27107282 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 27107183  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  27107182 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 27107103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 7824662 - 7824838
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  7824662 ctccaacaaaatccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 7824761  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 186  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  7824762 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcct 7824838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 45147314 - 45147493
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45147314 ctccaacaaagtccatagagatgttatcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 45147413  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||||||||| || |  || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  45147414 acaaaccaaacaagcataaacaaattccgcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 45147493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 14937109 - 14937285
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  ||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  14937109 ctccaacaaagtccatagagttgctatcccacttccactgtggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatg 14937208  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 186  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||    
T  14937209 acaaaccaaactagcataaacaaactctgcaatttcgttcttcattctaggccaccaaaacaacctcttcaaatcct 14937285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 15364702 - 15364878
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  ||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  15364702 ctccaacaaagtccatagagttgctatcccacttccactttggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatg 15364801  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 186  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||    
T  15364802 acaaaccaaactagcataaacaaactctgcaatttcgttcttcattctaggccaccaaaacaacctcttcaaatcct 15364878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 13455509 - 13455685
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||| || ||||| || ||||| ||||| |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  13455509 ctccaacaaaatccatagagatactatctcatttccattctggaacaaacaacggttgcatcaaacctaacggtttctgatgttcaaccttcgacttctg 13455608  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 186  Q
    ||||||||| ||||||||||||||||| | ||| ||||||||||||||||||||| | |||||||||||||||||||    
T  13455609 acaaaccaagcaagcataaacaaactcagcaatctccttcttcattccaggccaccataacaacctcttcaaatcct 13455685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 17924413 - 17924589
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||| || ||||| ||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17924413 ctccaacaaagtccatagagatactatctcactttcactctggctcaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctg 17924512  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 186  Q
    |||||| || |||||||||||||| || | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  17924513 acaaacaaagcaagcataaacaaattccgcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcct 17924589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 4440690 - 4440869
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||| ||  ||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  4440690 ctccaacaaaatccatagagatattatcccacttccactctggcacaaataacggttgcatcaaaccgtacggtttctgatgttcaatcgtcgacttctg 4440789  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||| ||||||||| ||||| ||||  || |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  4440790 acaaaccatacaagcatatacaaattctgcgatctccttcttcattccagaccaccaaaacaacctctttaaatcctgat 4440869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 21674041 - 21673862
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||| || ||||| |||||||||||| | |||| |||||||||||||||||| |||||| | ||||||||||||||||| |||||    
T  21674041 ctccaacaaagtccatagagatactatctcacttccactctagcacaatcaacggttgcatcaaacctgacggtctttgatgttcaatcttcgatttctg 21673942  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||| |||||||||||||| |||| ||| || ||||||| |||||||||| |||||||| |||||||||||||||    
T  21673941 acaaaccaagcaagcataaacaaattctgaaatctctttcttcagtccaggccaccaaaacaacatcttcaaatcctgat 21673862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 13353956 - 13354091
Alignment:
Q  54 acaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaatttccttcttca 153  Q
    ||||||||||||||||||||||| || | |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||  || ||||||||||    
T  13353956 acaaacaacggttgcatcaaacctgatgatttctgatgttcaatcttagacttctaacaaaccaaacaagcataaacaaactctgcgatctccttcttca 13354055  T
Q  154 ttccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||| |||| ||||||| ||||||||||||||||    
T  13354056 ttccagtccaccaaaacaatctcttcaaatcctgat 13354091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 23642212 - 23642387
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    ||||||| || |||||||||  |||||||||||||||| || |||||||||||||| |||||||| ||||  |||||||||||||| || ||||| ||||    
T  23642212 ccaacaaaatacatagaaatattatcccacttccactcagggacaaacaacggttgaatcaaacctgacgacttctgatgttcaatgttagactt-tgac 23642310  T
Q  112 -aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
     ||| |||||||||||| ||||||||    || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23642311 aaaatcaaacaagcatacacaaactc--atatgtccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 23642387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 17144769 - 17144590
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||| |||| || |||||| ||| ||| |||||||||||| ||||||||||||| ||||||||||||||| || |||||||||| |||||| ||||| ||    
T  17144769 ctccgacaaaattcatagatatgttattccacttccactccggtacaaacaacgattgcatcaaacccgatggcttctgatgttaaatcttagacttttg 17144670  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||| |||||||||||| |||||||| |  |||||| | ||||||| || ||||  || ||| ||||||||||| ||||    
T  17144669 acaaatcaaacaagcatacacaaactccgctatttcccttttcattctagaccacctaagcaatctcttcaaatcttgat 17144590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 13022130 - 13022245
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || |||||||| ||||  || ||||||||||||  ||||    
T  13022130 atccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgatcaacattagacttctgacaagtcaaa 13022229  T
Q  120 caagcataaacaaact 135  Q
    ||||||||||||||||    
T  13022230 caagcataaacaaact 13022245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 13666305 - 13666423
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  || ||||  || ||| || |  || ||||||||||||| ||||||||||||||||     
T  13666305 acaaaatccatagaaatgctatcccacttccactccggcacatccatcggtgtcaacaaccctgcaggcttctgatgttcaaccttcgacttctgacaag 13666404  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  13666405 tcaaacatgcatacacaaa 13666423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 19147979 - 19148099
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| |||||||||||||||||||| ||||| |||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  19147979 acaaaatccatggaaatgctatcccacttccattctggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 19148078  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  19148079 tcaaacatgcataaacaaact 19148099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 20747378 - 20747498
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| |||||||||||||||||||| ||||| |||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  20747378 acaaaatccatggaaatgctatcccacttccattctggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 20747477  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  20747478 tcaaacatgcataaacaaact 20747498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 12457413 - 12457528
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    ||||||||| || || |||||||||||||| ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||  ||||    
T  12457413 atccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaagtcaaa 12457512  T
Q  120 caagcataaacaaact 135  Q
    ||||||||||||||||    
T  12457513 caagcataaacaaact 12457528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 15341204 - 15341319
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||  ||||    
T  15341204 atccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaagtcaaa 15341303  T
Q  120 caagcataaacaaact 135  Q
    || ||||| |||||||    
T  15341304 catgcatacacaaact 15341319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 11305744 - 11305624
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  11305744 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 11305645  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  11305644 tcaaacaggcataaacaaact 11305624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 13968149 - 13968029
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || ||||||||||| || ||||||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  13968149 acaaaatccatagagatactgtcccacttccagtccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaacctttgacttctgacaaa 13968050  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  13968049 tcaaacaggcataaacaaact 13968029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 26118086 - 26117966
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || ||||||||||||||||| ||||||   ||||||  || ||| ||||  || |||||||| |||| ||| ||||||||||| |    
T  26118086 acaaaatccatagagatactatcccacttccactccggtacatctaacggtgtcaacaaccccgcaggcttctgatgctcaaccttggacttctgacaga 26117987  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||| ||||    
T  26117986 tcaaacaggcataaacgaact 26117966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 40649 - 40570
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttc 94  Q
    |||| |||||| |||||||| ||||||||||||||||| | |  ||| ||||||||||| || |||||||| ||||||||    
T  40649 acaaaatccatcgaaatgctgtcccacttccactctggaatactcaagggttgcatcaacccagacggtttttgatgttc 40570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 16753 - 16699
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16753 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 18053434 - 18053336
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| |||  || ||| || |  |||||||| ||||||| ||| ||||||||||||    
T  18053434 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggtgtcaacaatcctgcaggtttctggtgttcaaccttagacttctgacaa 18053336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 23505351 - 23505253
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| ||   || ||| || |  |||||||||||||||| ||| ||||||||||||    
T  23505351 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggcgtcaacaatcctgcaggtttctgatgttcaaccttagacttctgacaa 23505253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 15102084 - 15101964
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||| | |||||||||||||| || |||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  15102084 acaaaatccatagaaatgttgtcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 15101985  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  15101984 tcaaacatgcatagacaaact 15101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 8211540 - 8211489
Alignment:
Q  84 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||| |||| ||| ||||||||||||| |||||| |||||||||||||    
T  8211540 ttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaact 8211489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 8708438 - 8708492
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||  ||||||||||||||||| ||||| | |||||||||||    
T  8708438 ggtttctgatgctcaactttcgacttctgacaaactaaacaggaataaacaaact 8708492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 15123334 - 15123261
Alignment:
Q  40 acttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    ||||||| || || |||||||||||||||||||  || || ||||| ||||| ||||||||  |||||||||||    
T  15123334 acttccattcaggaacaaacaacggttgcatcactccagatggtttgtgatgatcaatcttaaacttctgacaa 15123261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 9596890 - 9596930
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 121  Q
    ||||||| ||| ||||||||||||||||||||||| |||||    
T  9596890 ggtttctaatgctcaatcttcgacttctgacaaactaaaca 9596930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 15154092 - 15154040
Alignment:
Q  83 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  15154092 tttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 15154040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 6e-76; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 16382017 - 16381838
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  16382017 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 16381918  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  16381917 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 16381838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 23027360 - 23027181
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||| | || ||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23027360 ctccaacaaaatccataaagatactatcccacttccactccggcacaaacaacggttgcatcaaacccgacgatttctgatgttcaatcttcgacttctg 23027261  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23027260 acaaaccaaacaagcataaacaaactctgcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 23027181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 1648458 - 1648279
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  1648458 ctccaacaaaatccatagaaatgctatcccatttccactctggcacaaacaacggttgcatcaaacccaacggtctctgatgttcaatcttcgatttctg 1648359  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  1648358 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 1648279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 18572290 - 18572467
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  18572290 ccaacaaagtccatagaaatgctatctcacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctgac 18572389  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  18572390 aaaccaaacaagcataaacaaactcagtaatctccttcttaattccaggccacaaaaacaacctcttcaaatcctgat 18572467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 14625001 - 14624822
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| || ||    
T  14625001 ctccaacaaaatcaatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttttg 14624902  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||  ||| |||||||||| |||||||||||||    
T  14624901 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccagaacaccaaaacaaccttttcaaatcctgat 14624822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 18837550 - 18837373
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||| | || |||||||    
T  18837550 ccaacaaagtccatagaaatgctatcccacgtccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcattgatttctgac 18837451  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  18837450 aaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaatctctttaaatcctgat 18837373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 15078010 - 15077831
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||| |||| ||||||||| || |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||    
T  15078010 ctccgacaaaatccatagagatactatcccacttccactctggcacaaacaacagttgcatcaaacccgacagtttctggtgttcaatcttcgacttttg 15077911  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  15077910 acaaaccaaacaagcatatacaaactcagcaatttccttcttcattctaggccaccaaaacaacctcttcaaatcctgat 15077831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 16098687 - 16098866
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||||||||||||||||||||||||| | || |||||| |||||||||||| |||||||||||||||||||||||||||||| ||    
T  16098687 ctccaacaaagtccatagaaatgctatcccacttccactctagcacgaacaacagttgcatcaaactcgacggtttctgatgttcaatcttcgacttatg 16098786  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  16098787 acaaaccaaacaagcatagacaaactccgcaatttccttcttcattccgggccaccaaaacaacttcttcaaatcctgat 16098866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 16233665 - 16233844
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  16233665 ctccaacaaaatccatggaaatgctatcccacttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 16233764  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| |  || ||| ||||||||||||||||| |||||||||| |||||||| ||||    
T  16233765 acaaaccaaacaagcataaacaaactcagcgatctccatcttcattccaggccaccaaaacaaccttttcaaatcttgat 16233844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 23996885 - 23997064
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||| | ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  23996885 ctccaacgaaatccatagaaatgctatcccatttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 23996984  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| || ||||| ||||    
T  23996985 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttaaaatcttgat 23997064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 21927842 - 21928018
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||| || |||||||||||||||||||| |||||||||||||||||||||| | ||||| |||||||||||||||||||||| ||    
T  21927842 ctccaacaaagtccatagagatactatcccacttccactctggcacaaacaacggttgcatcaaactcaacggtctctgatgttcaatcttcgacttttg 21927941  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 186  Q
    |||||||||||||||||||||||| || |  || ||||||||||||||||||||| ||||| |||||||||||||||    
T  21927942 acaaaccaaacaagcataaacaaattccgcgatctccttcttcattccaggccaccaaaacgacctcttcaaatcct 21928018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 35275622 - 35275551
Alignment:
Q  118 aacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||| ||||| || | |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  35275622 aacaagcatagacaaattcagcaatttccttcttcatttcaggccaccaaaacaacctcttcaaatcctgat 35275551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 15459978 - 15460144
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| |||| |  |||||||  || ||| || |  || ||||||||||||||||| ||||||||||||     
T  15459978 acaaaatccatagaaatgctatcccatttccactccggtatatccaacggtgtcaacaatcctgcaggcttctgatgttcaatcttagacttctgacaag 15460077  T
Q  115 ccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaa 181  Q
     |||||| ||||| ||||||   |  |  |||||||||| ||||| |||| |||||||| |||||||    
T  15460078 tcaaacacgcatacacaaaccgcgcgacatccttcttcaatccagaccaccaaaacaacttcttcaa 15460144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 19865395 - 19865449
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  19865395 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 19865449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 27566553 - 27566513
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 121  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27566553 ggtttctgatgttcaatcttcgacttctgacaaactaaaca 27566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 16963018 - 16962976
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 123  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  16963018 ggtttctgatgctcaatcttcgacttctgacaaatcaaacaag 16962976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 22078263 - 22078209
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  22078263 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaact 22078209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 28282452 - 28282354
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| |||  || ||| || |  |||||||| ||||||| ||| ||||||||||||    
T  28282452 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggtgtcaacaatcctgcaggtttctggtgttcaaccttagacttctgacaa 28282354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 19879945 - 19880058
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    ||||||||||||||||||||| |||||||||||||||  ||| |||  || ||| || |  || |||||||||||||  || |||||||| |||  ||||    
T  19879945 atccatagaaatgctatcccatttccactctggtacatccaatggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctggcaagtcaaa 19880044  T
Q  120 caagcataaacaaa 133  Q
    || ||||| |||||    
T  19880045 caggcatacacaaa 19880058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 5296845 - 5296725
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||| ||     
T  5296845 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgataag 5296746  T
Q  115 ccaaacaagcataaacaaact 135  Q
     ||| || ||||| |||||||    
T  5296745 tcaagcatgcatacacaaact 5296725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 24365054 - 24365174
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||| |    
T  24365054 acaaaatccatagatatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaga 24365153  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||| ||||    
T  24365154 tcaaacaggcataaacgaact 24365174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 27331006 - 27330954
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27331006 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27330954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 27391746 - 27391694
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27391746 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27391694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 10468467 - 10468368
Alignment:
Q  36 tcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||||||| ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||  |||||| |||||||||||||    
T  10468467 tcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaagtcaaacatgcataaacaaact 10468368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 19435653 - 19435756
Alignment:
Q  24 atagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 123  Q
    |||||||| || |||||||||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||  |||||| |    
T  19435653 atagaaatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaagtcaaacacg 19435752  T
Q  124 cata 127  Q
    ||||    
T  19435753 cata 19435756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 5838792 - 5838738
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| || | ||||||||||||||||| |||||||| ||| |||||||    
T  5838792 ggtttctgatgctcgaccttcgacttctgacaaatcaaacaagaatacacaaact 5838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 18407515 - 18407473
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 123  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||    
T  18407515 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaag 18407473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 20636874 - 20636820
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  20636874 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 20636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 27560256 - 27560158
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| ||   || ||| || |  || ||||||||||||| ||| ||||||||||||    
T  27560256 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggcgtcaacaatcctgcaggcttctgatgttcaaccttagacttctgacaa 27560158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 6e-76; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 21936869 - 21936690
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  21936869 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 21936770  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  21936769 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 21936690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 24581897 - 24582076
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  24581897 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctg 24581996  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| |||||||||||| |||||||| |||||||||| |||||||||||||    
T  24581997 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattacaggccaccaaaacaaccttttcaaatcctgat 24582076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 27011773 - 27011950
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  27011773 ccaacaaagtccatagaaatgctatctcacttccactctggcacaaacaacggttgcatcaaacccgacgttctctgatgttcaatcttcgatttctgac 27011872  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| |||| |||||||||| |||||||||||||    
T  27011873 aaaccaaacaagcataaacaaactcagtaatctccttcttcattccagaccaccaaaacaaccttttcaaatcctgat 27011950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 23504129 - 23504308
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||| | || |||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||    
T  23504129 ctccaacaaaatccataaagatactatcccaattccactctggcacaaacaacagttgcatcaaacccgacggtctctgatgttcaatcttcgatttttg 23504228  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  23504229 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 23504308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 35 - 189
Target Start/End: Complemental strand, 25244006 - 25243852
Alignment:
Q  35 atcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaac 134  Q
    ||||| |||||||||| | |||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |||||||||||  ||||||    
T  25244006 atcccgcttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatcaaacaagcatgcacaaac 25243907  T
Q  135 tctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||  | || |||||||||| |||||||| | |||||||| |||| ||||| ||||    
T  25243906 tcatttatatccttcttcactccaggccgccaaaacaacatctttaaatcttgat 25243852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 35 - 189
Target Start/End: Complemental strand, 25308158 - 25308004
Alignment:
Q  35 atcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaac 134  Q
    ||||| |||||||||| | |||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |||||||||||  ||||||    
T  25308158 atcccgcttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatcaaacaagcatgcacaaac 25308059  T
Q  135 tctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||  | || |||||||||| |||||||| | |||||||| |||| ||||| ||||    
T  25308058 tcatttatatccttcttcactccaggccgccaaaacaacatctttaaatcttgat 25308004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 19566370 - 19566202
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||   | ||||| |||||||| |||||||| || |||||    
T  19566370 ctccaacaaagtccatcgaaatactatcccaattccactctggcacaaacaacggttgcatcatttcagacggcttctgatgctcaatcttagatttctg 19566271  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctctt 178  Q
    |||||| |||||| |||| | |||||| |  |  ||| |||||||||| |||||| |||||||| ||||    
T  19566270 acaaacgaaacaatcatacaaaaactcagctacatccctcttcattcctggccaccaaaacaacttctt 19566202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 20342974 - 20343094
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| |||||   |||||||  || ||| || |  || ||||||||||||| ||| |||||||||||||    
T  20342974 acaaaatccatagagatactgtcccacttccactccggtacgtccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttggacttctgacaaa 20343073  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  20343074 tcaaacaggcataaacaaact 20343094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 37543057 - 37542937
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| ||  | |||||||||||||||||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  37543057 acaaaatccatagagataatgtcccacttccactctggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 37542958  T
Q  115 ccaaacaagcataaacaaact 135  Q
    ||||||| |||||||||||||    
T  37542957 ccaaacaggcataaacaaact 37542937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 22462644 - 22462763
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||| ||||||| ||||||||||||||   |||||||  || |||||| |  ||  |||||||||||| ||| ||||||||||||     
T  22462644 acaaaatccatagaaatgatatcccatttccactctggtacctccaacggtgtcaacaaacctgcaggcctctgatgttcaaccttagacttctgacaag 22462743  T
Q  115 ccaaacaagcataaacaaac 134  Q
     |||||| ||||| ||||||    
T  22462744 tcaaacacgcatacacaaac 22462763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 16065458 - 16065304
Alignment:
Q  8 atctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttc 107  Q
    |||||||||||  ||||  ||||| |||| ||| || ||||  || |||||||||||||||||||   | |  || || ||||| |||||||| ||||||    
T  16065458 atctccaacaaactccaacgaaatactattccattttcacttcggaacaaacaacggttgcatcatttctggaggattatgatgctcaatcttagacttc 16065359  T
Q  108 tgacaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggcc 162  Q
    ||| ||| ||| |||||||| ||||||||||| |  |||||||||||||| ||||    
T  16065358 tgataaatcaatcaagcatacacaaactctgtgacatccttcttcattcctggcc 16065304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 17269010 - 17268916
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||| ||||||||||||||||||||| |||||||||||||||  |||||||  || ||| || |  ||||||||||| |||| ||| ||||||||    
T  17269010 acaaaatccatagaaatgctatcccatttccactctggtacatccaacggtgtcaacaatcctgcaggtttctgatggtcaaccttagacttctg 17268916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 18776546 - 18776600
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||    
T  18776546 ggtttctgatgctcaatcttcgacttctgacaaactaaacaagaatacacaaact 18776600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 23574513 - 23574567
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||    
T  23574513 ggtttctgatgttcaatcttcgacttctgacaaactaaacaggaatacacaaact 23574567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 20822150 - 20822311
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    |||||||||||| |||||||| |||||||| ||||||  |||||||  || ||| ||||  ||  |||||||||||| ||| ||||| ||||||  ||||    
T  20822150 atccatagaaatactatcccatttccactccggtacatccaacggtgtcaacaatcccgcaggcctctgatgttcaaccttagacttttgacaagtcaaa 20822249  T
Q  120 caagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaa 181  Q
    || ||||| ||||||  ||  |  |||||||||| ||| | |||| |||||||| |||||||    
T  20822250 cacgcatacacaaaccgtgcgacatccttcttcaatccggaccaccaaaacaacttcttcaa 20822311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 22503371 - 22503491
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||| || |||||||||||||| | ||||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  22503371 acaaaatccatagaaatactgtcccacttccactccgatacatccaacggtgacaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 22503470  T
Q  115 ccaaacaagcataaacaaact 135  Q
      || ||||||||||||||||    
T  22503471 ttaagcaagcataaacaaact 22503491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 23440986 - 23441038
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||| |||||    
T  23440986 ggtttctgatgttcaatcttcgacttatgacaaactaaacaagaatacacaaa 23441038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 25848767 - 25848887
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  25848767 acaaaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaat 25848866  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  25848867 tcaaacaggcataaacaaact 25848887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 20774451 - 20774570
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || |||||| |  ||  ||||||||||||  || |||||||| |||     
T  20774451 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaacctgcgggcctctgatgttcaactttagacttctggcaag 20774550  T
Q  115 ccaaacaagcataaacaaac 134  Q
     |||||| ||||| ||||||    
T  20774551 tcaaacatgcatacacaaac 20774570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 21881725 - 21881779
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||||||||||||| |||||||||||||| ||||| | ||| |||||||    
T  21881725 ggtttctgatgttcaatctttgacttctgacaaactaaacaggaatacacaaact 21881779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 14886667 - 14886547
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  14886667 acaaaatccatggagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 14886568  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  14886567 tcaaacaggcataaacaaact 14886547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 23517302 - 23517342
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 121  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  23517302 ggtttctgatgttcaatcttcaacttctgacaaactaaaca 23517342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 24798073 - 24797953
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  24798073 acaaaatccatggagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 24797974  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  24797973 tcaaacaggcataaacaaact 24797953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 28894618 - 28894499
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||| |||||||| |||||||| ||||||  |||||||  || |||||| |  ||  ||||||||||||  || |||||||| |||     
T  28894618 acaaaatccatagaaatactatcccatttccactccggtacatccaacggtgtcaacaaacctgcgggcctctgatgttcaactttagacttctggcaag 28894519  T
Q  115 ccaaacaagcataaacaaac 134  Q
     |||||| ||||| ||||||    
T  28894518 tcaaacatgcatacacaaac 28894499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 28916089 - 28915970
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||| |||||||| |||||||| ||||||  |||||||  || |||||| |  ||  ||||||||||||  || |||||||| |||     
T  28916089 acaaaatccatagaaatactatcccatttccactccggtacatccaacggtgtcaacaaacctgcgggcctctgatgttcaactttagacttctggcaag 28915990  T
Q  115 ccaaacaagcataaacaaac 134  Q
     |||||| ||||| ||||||    
T  28915989 tcaaacatgcatacacaaac 28915970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 28923444 - 28923325
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||| |||||||| |||||||| ||||||  |||||||  || |||||| |  ||  ||||||||||||  || |||||||| |||     
T  28923444 acaaaatccatagaaatactatcccatttccactccggtacatccaacggtgtcaacaaacctgcgggcctctgatgttcaactttagacttctggcaag 28923345  T
Q  115 ccaaacaagcataaacaaac 134  Q
     |||||| ||||| ||||||    
T  28923344 tcaaacatgcatacacaaac 28923325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 25423965 - 25424019
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  25423965 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 25424019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 6e-76; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 30138208 - 30138387
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  30138208 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 30138307  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  30138308 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 30138387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 30147759 - 30147938
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  30147759 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 30147858  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  30147859 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 30147938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 13967078 - 13966899
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||    
T  13967078 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttctg 13966979  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  13966978 acaaaccaaacaagcataaacaaactcagcgatttccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 13966899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 17193496 - 17193675
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||| || |||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  17193496 ctccaacaaaatccatagagatactatcccacttccactctggcacaaacaacatttgcatcaaacccgatggtttctgatgttcaatcttcgacttctg 17193595  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||| |||||    
T  17193596 acaaatcaaacaagcataaacaaactctgcaatttccttgttcattccaagccaccaaaacaacctcttcaaattctgat 17193675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 6152587 - 6152410
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    ||||||| ||||||||| || |||||||||||||||||  | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  6152587 ccaacaaaatccatagagatactatcccacttccactcaagcacaaacaacggttgcatcaaacccgacggtctttgatgttcaatcttcgacttctgac 6152488  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||| |||||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6152487 aaactaaacaaacataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 6152410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 8274137 - 8273958
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||||||||| || |||||    
T  8274137 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaagaatggttgcatcaaacccgacggtctctgatgttcaatctttgatttctg 8274038  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||| |||| |||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  8274037 acaaaccaagcaagaataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 8273958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 16257546 - 16257725
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  16257546 ctccaacaaaatccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgatcaatcttcgatttctg 16257645  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| |   | ||||||||||||||||||||| |||||||||| |||||||| ||||    
T  16257646 acaaaccaaacaagcataaacaaactcagcggtctccttcttcattccaggccaccaaaacaaccttttcaaatcttgat 16257725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 16742441 - 16742262
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  16742441 ctccaacaaaatccatagaaatgctattccacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctg 16742342  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| |  || ||||||||||||||| ||||| |||||||||| |||||||| ||||    
T  16742341 acaaaccaaacaagcataaacaaactcagcgatctccttcttcattccaagccaccaaaacaaccttttcaaatcttgat 16742262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 34 - 189
Target Start/End: Complemental strand, 6712123 - 6711968
Alignment:
Q  34 tatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6712123 tatcccacttccactctggcacaaacaacaattgcatcaaacccgacgatttctgatgttcaatcttagacttctgacaaaccaaacaagcataaacaaa 6712024  T
Q  134 ctctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
     || |  || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6712023 ttccgcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 6711968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 18749078 - 18749246
Alignment:
Q  21 tccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 120  Q
    |||||||| || ||||| || ||||||||||| | ||||||||||||||||||| |||||||||| || ||||||||||||||||||| |||||||||||    
T  18749078 tccatagagatactatctcatttccactctggcaaaaacaacggttgcatcaaaaccgacggtttatgttgttcaatcttcgacttctaacaaaccaaac 18749177  T
Q  121 aagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||| ||||||||| || |  || |||||| |||||||||||||||||||||||||||||||||||||||    
T  18749178 aagaataaacaaattccgcgatctccttcatcattccaggccactaaaacaacctcttcaaatcctgat 18749246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 15095434 - 15095584
Alignment:
Q  37 cccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactc 136  Q
    ||||||||||| | || ||||||||||||||||||||||||||||  || |||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  15095434 cccacttccacgcaggcacaaacaacggttgcatcaaacccgacgacttttgatgttcaatcttcgacttttgaaaaaccaaacaagcatacacaaactc 15095533  T
Q  137 tgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctg 187  Q
    ||  || ||||||||||||||||||||| ||||||||||||| ||||||||    
T  15095534 tgctatatccttcttcattccaggccaccaaaacaacctctttaaatcctg 15095584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 15610554 - 15610684
Alignment:
Q  58 acaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaatttccttcttcattcc 157  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| |  || ||||||||||||||    
T  15610554 acaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacagactcagcgatctccttcttcattcc 15610653  T
Q  158 aggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||  ||||||||| |||||||||||||    
T  15610654 aggccac-caaacaaccttttcaaatcctgat 15610684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 267033 - 266907
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| || |||||||||  |||||||||||||||| ||||||||||| ||||||||||||||| | |  || || ||||||||||||||||||||    
T  267033 ctccaacaaaattcatagaaatattatcccacttccactccggtacaaacaatggttgcatcaaacccaatgacttttggtgttcaatcttcgacttctg 266934  T
Q  110 acaaaccaaacaagcataaacaaactc 136  Q
    |||||||||||||||||| ||||||||    
T  266933 acaaaccaaacaagcatacacaaactc 266907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 15062207 - 15062261
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  15062207 ggtttctgatgttcaatcttcgacttctgacaaactaaacaagaatacacaaact 15062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 16371876 - 16371930
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  16371876 ggtttctgatgttcaatcttcgacttctgacaaactaaacaagaatacacaaact 16371930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 17493037 - 17493149
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||||||| |||||||||||  |||||||  || ||| || |  || ||||||||||||| ||| || |||||||||     
T  17493037 acaaaatccatagaaatgctatcccacttcaactctggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagatttctgacaag 17493136  T
Q  115 ccaaacaagcata 127  Q
     |||||| |||||    
T  17493137 tcaaacatgcata 17493149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 10419767 - 10419648
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| |||| |  |||||||  || ||| ||||  || ||||||||||||| ||| ||||| ||||||     
T  10419767 acaaaatccatagaaatgctatcccatttccactccggtatatccaacggtgtcaacaatcccgcaggcttctgatgttcaaccttagacttttgacaag 10419668  T
Q  115 ccaaacaagcataaacaaac 134  Q
     |||||| ||||| ||||||    
T  10419667 tcaaacacgcatacacaaac 10419648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 12498645 - 12498763
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || |||||||| ||||| ||||| |||   |||| |  ||||| ||| |  ||||||||||||| ||||||||||||||||||||    
T  12498645 acaaaatccatagatatactatcccatttccattctggcacatctaacgataccatcataccagcaggtttctgatgtttaatcttcgacttctgacaaa 12498744  T
Q  115 ccaaacaagcataaacaaa 133  Q
    | ||||||| ||| |||||    
T  12498745 ctaaacaagaatacacaaa 12498763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 44777654 - 44777752
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||||||||||  ||| |||  || ||| || |  || ||||||||||||| ||| ||||||||||||    
T  44777654 acaaaatccatagaaatgctatcccatttccactctggtacatccaatggtgtcaacaatcctgcgggcttctgatgttcaaccttagacttctgacaa 44777752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 10384375 - 10384495
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  10384375 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaaa 10384474  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  10384475 tcaaacaggcataaacaaact 10384495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 28754725 - 28754845
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  28754725 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 28754824  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  28754825 tcaaacaggcataaacaaact 28754845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 47124351 - 47124471
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  47124351 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 47124450  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  47124451 tcaaacaggcataaacaaact 47124471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 14574330 - 14574449
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| |||||||||||||||||||||||||| |||   |||| |  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  14574330 acaaaatccatggaaatgctatcccacttccactctggcacatctaacgatgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 14574429  T
Q  115 ccaaacaagcataaacaaac 134  Q
     |||||| ||||||||||||    
T  14574430 tcaaacatgcataaacaaac 14574449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 4678845 - 4678943
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| |||  || ||| || |  |||||||| ||||||| ||| ||||||||||||    
T  4678845 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggtgtcaacaatcctgcaggtttctggtgttcaaccttagacttctgacaa 4678943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 13942431 - 13942529
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| | |  || ||| || |  |||||||||||||||| ||| ||||||||||||    
T  13942431 acaaaatccatagaaatgctatcccatttccactccggtacatccaatgatgtcaacaatcctgcaggtttctgatgttcaaccttagacttctgacaa 13942529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 16491848 - 16491794
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  16491848 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaact 16491794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 16692627 - 16692681
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16692627 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16692681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 16806593 - 16806539
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16806593 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16806539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 18134068 - 18133950
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| ||||||||||||||||||||||| || |||  |||||||  || ||| || |  || |||| |||||||| ||| ||||||||||||     
T  18134068 acaaaatccattgaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctaatgttcaaccttagacttctgacaag 18133969  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  18133968 tcaaacatgcatacacaaa 18133950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 41177929 - 41178027
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| |||  || ||| || |  |||||||| ||||||| ||| ||||||||||||    
T  41177929 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggtgtcaacaatcctgcaggtttctggtgttcaaccttagacttctgacaa 41178027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 15577152 - 15577205
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacg 63  Q
    ||||||||| ||||||||||||| ||||||| ||||| ||||| ||||||||||    
T  15577152 ctccaacaaaatccatagaaatgttatcccatttccaatctggcacaaacaacg 15577205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 9523116 - 9523236
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || || |||||||| ||||||||||| |||   || |||  ||||| ||| |  ||||||||||| ||||  ||||||||||||||||    
T  9523116 acaaaatccatggatatactatcccatttccactctggcacatctaatggtatcatcataccagcaggtttctgatgctcaactttcgacttctgacaaa 9523215  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||||| ||| |||||||    
T  9523216 tcaaacaagaatacacaaact 9523236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 11960891 - 11960771
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||| || || || |||||||| ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||     
T  11960891 acaaaatccatagaaatactgtctcatttccactccggtacatccaacggtgtcaacaatcctgcaggcttctgatgttcaactttagacttctgacaag 11960792  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  11960791 tcaaacatgcataaacaaact 11960771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 15209288 - 15209408
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || ||||||||||| |||||||||||||||   || | |  |||||  || |  ||||||||||| ||||| ||||||||||||||||    
T  15209288 acaaaatccatggatatgctatcccatttccactctggtacatctaaagataccatcatcccagcaggtttctgatgctcaattttcgacttctgacaaa 15209387  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| | ||| |||||||    
T  15209388 tcaaacaggaatacacaaact 15209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 16380645 - 16380609
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtaca 56  Q
    ||||||||||||||||||||| |||||||||||||||    
T  16380645 atccatagaaatgctatcccatttccactctggtaca 16380609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 14126261 - 14126222
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaac 120  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  14126261 ggtttctgatgctcaatcttcgacttctgacaaactaaac 14126222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 8758804 - 8758706
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| |||  || ||| || |  |||||||| |||||||  || ||||||||||||    
T  8758804 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggtgtcaacaatcctgcaggtttctggtgttcaactttagacttctgacaa 8758706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 14876165 - 14876111
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||| |||||||| |||| ||||| | ||| |||||||    
T  14876165 ggtttctgatgttcaatcttcaacttctgataaactaaacaggaatacacaaact 14876111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 17490313 - 17490367
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  17490313 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 17490367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 6e-76; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 23817082 - 23816903
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||  || |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  23817082 ctccaacaaaatccatagcgatactatcccacttccactctggcacaaacaacggttgtatcaaacctgacggtttctgatgttcaatcttcgacttctg 23816983  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23816982 acaaaccaaacaagcataaacaaactctggaatttccttcttcattccaggccactaaaacaacctcttcaaatactgat 23816903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 24569707 - 24569528
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||     
T  24569707 ctccaacaatgtccatagaaatgttatcccacttccactctggcacaaacaacagttgcatcaaacccgacggtttctgatgttcaatcttcgatttcta 24569608  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24569607 acaaaccaaacaagcatatacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 24569528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 24831226 - 24831052
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  24831226 ctccaacgaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 24831127  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatc 184  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| ||||||||    
T  24831126 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatc 24831052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 22761598 - 22761429
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  22761598 atccatagagatgatatcccacttccactctggcacaaacaacggttacatcaaacccgacggtttctgatgttcaatcttcgatttctaacaaaccaaa 22761499  T
Q  120 caagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
     |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  22761498 gaagcataaacaaactctgcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 22761429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 12640269 - 12640093
Alignment:
Q  13 caacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgaca 112  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  12640269 caacaaaatccatagaaatgctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgaca 12640170  T
Q  113 aaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||| |||| |||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  12640169 aaccaagcaagaataaacaaactcagcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 12640093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 22276682 - 22276861
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||    
T  22276682 ctccaacaaaatccatagaaatgctatcccatttccattttggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttctatttctg 22276781  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  22276782 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattttaggccaccaaaacaacctcttcaaatcttgat 22276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 25129051 - 25129227
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||| ||  ||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25129051 ctccaacaaagtccatagagatattatcccatttccactctggcataaacaacggttgcatcaaacccgacggtttatgatattcaatcttcgacttctg 25129150  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 186  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||||| |||||||||||||||||||||    
T  25129151 acaaaccaaacaagcataaacaaactctgcaatctccttcttccttctaggccaccaaaacaacctcttcaaatcct 25129227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 21906208 - 21906029
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| || |||||| || ||||| ||||||||||| ||||||||||||||||||||||| |  ||||||||||||||| ||||||| ||||||||    
T  21906208 ctccaacaaaattcatagatatactatcacacttccactccggtacaaacaacggttgcatcaagcttgacggtttctgatgtccaatcttagacttctg 21906109  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||| ||||||||| ||||| |  |  || ||||||||| |||||||| || ||||||||||||| ||||||||||    
T  21906108 acaaaccacacaagcatacacaaattgagctatatccttcttcgttccaggcgaccaaaacaacctctttaaatcctgat 21906029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 23107698 - 23107644
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  23107698 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 23107644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 1064160 - 1064280
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  1064160 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 1064259  T
Q  115 ccaaacaagcataaacaaact 135  Q
    ||||||| |||||||||||||    
T  1064260 ccaaacaggcataaacaaact 1064280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 11357908 - 11357788
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || ||||||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  11357908 acaaaatccatagagatactatcccacttccactccggtacatctaacggtgccaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 11357809  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  11357808 tcaaacaggcataaacaaact 11357788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 24642151 - 24642271
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  24642151 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgccaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 24642250  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  24642251 tcaaacatgcatagacaaact 24642271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 22756433 - 22756379
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||| |||||||    
T  22756433 ggtttctgatgttcaatcttcgacttcttacaaaccaaacaggaatacacaaact 22756379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 23294344 - 23294462
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||| ||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  23294344 acaaaatccatagaaatgctatcccactttcactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 23294443  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  23294444 tcaaacatgcatacacaaa 23294462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 21325234 - 21325194
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 121  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  21325234 ggtttctgatgttcaatcttcgacttctgacaaactaaaca 21325194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 24707450 - 24707398
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||| |||||    
T  24707450 ggtttctaatgttcaatcttcgacttctgacaaactaaacaagaatacacaaa 24707398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 12574762 - 12574860
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| |||  || ||| || |  |||||||| ||||||| ||| ||||||||||||    
T  12574762 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggtgtcaacaatcctgcaggtttctggtgttcaaccttagacttctgacaa 12574860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 27788150 - 27788248
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| |||  || ||| || |  |||||||| ||||||| ||| ||||||||||||    
T  27788150 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggtgtcaacaatcctgcaggtttctggtgttcaaccttagacttctgacaa 27788248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 21890686 - 21890634
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||| |||||||| ||||||||||||||||| |||||||| ||| |||||    
T  21890686 ggtttctaatgttcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 31831067 - 31831187
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  31831067 acaaaatccatggagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaaa 31831166  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  31831167 tcaaacatgcataaacaaact 31831187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 23066866 - 23066920
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| ||||||||||||||||| |||||||  ||| |||||||    
T  23066866 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaataatacacaaact 23066920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 30210884 - 30210832
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||||||||||||  ||||||||||||||||  ||||| ||||| |||||    
T  30210884 ggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaa 30210832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 41608353 - 41608313
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 121  Q
    ||||||||||||||||  ||||||||||||||||| |||||    
T  41608353 ggtttctgatgttcaactttcgacttctgacaaactaaaca 41608313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 45529986 - 45530038
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||||||||||||  ||||||||||||||||  ||||| ||||| |||||    
T  45529986 ggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaa 45530038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 6e-76; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 20830963 - 20830784
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  20830963 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 20830864  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  20830863 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 20830784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 22135126 - 22134949
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  |||||||| || |||||||||||| ||| ||| ||||||||| |||||||||||||||||||||| | ||||||||||||| |||||||||    
T  22135126 ccaacaaagtccatagagatactatcccacttctactgtggcacaaacaacagttgcatcaaacccgacggttttttatgttcaatcttcaacttctgac 22135027  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||||||| || | ||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22135026 aaaccaaacaagcataaacaaattccgcaatctccttcttcattccaggccaccaaaacaagctcttcaaatcctgat 22134949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 21201849 - 21201683
Alignment:
Q  21 tccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca--- 117  Q
    |||||||| || |||||||||||||||||||| |||||||| ||||||||||||| ||| || |||||||||||||| |||||||||| ||||| ||       
T  21201849 tccatagagatactatcccacttccactctggcacaaacaatggttgcatcaaactcgatggcttctgatgttcaattttcgacttctaacaaatcaaat 21201750  T
Q  118 aacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    || ||| ||| | | |||     || ||||||||||||||||||||| |||||||||| |||||||||||||    
T  21201749 aagaaggatagagatact-----atatccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 21201683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 19855098 - 19855215
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||||||||||||||| |||  |||||||  || ||| ||||  || |||||||| |||| ||| ||||||||||||     
T  19855098 acaaaatccatagaaatgctatcccacttccactctggcacatccaacggtgtcaacaaccccgcaggcttctgatgctcaaccttagacttctgacaag 19855197  T
Q  115 ccaaacaagcataaacaa 132  Q
     |||||| ||||| ||||    
T  19855198 tcaaacatgcatacacaa 19855215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 20835454 - 20835334
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||| ||||||||     
T  20835454 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacatctgacaag 20835355  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  20835354 tcaaacatgcatacacaaact 20835334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 21951702 - 21951822
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  21951702 acaaaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 21951801  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  21951802 tcaaacaggcataaacaaact 21951822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 31539563 - 31539443
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  31539563 acaaaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 31539464  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  31539463 tcaaacaggcataaacaaact 31539443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 22432682 - 22432632
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggt 65  Q
    |||| ||||||||||||||||||||| |||||||||||||||  |||||||    
T  22432682 acaaaatccatagaaatgctatcccatttccactctggtacatccaacggt 22432632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 20295205 - 20295325
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| ||  | ||||||||||| || ||||||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  20295205 acaaaatccatagagataatgtcccacttccagtccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 20295304  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  20295305 tcaaacaggcataaacaaact 20295325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 21749800 - 21749852
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  21749800 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 20856327 - 20856208
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||| ||||||| ||||||||||||||   |||||||  || |||||| |  ||  |||||||||||| ||| ||||||| ||||     
T  20856327 acaaaatccatagaaatgatatcccatttccactctggtacctccaacggtgtcaacaaacctgcaggcctctgatgttcaaccttagacttctaacaag 20856228  T
Q  115 ccaaacaagcataaacaaac 134  Q
      ||||| ||||| ||||||    
T  20856227 tgaaacacgcatacacaaac 20856208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 20939629 - 20939511
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||   ||||||||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  20939629 acaaaatccatagaaataaaatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 20939530  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  20939529 tcaaacatgcatacacaaa 20939511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 22361744 - 22361690
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  22361744 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 22361690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 16078155 - 16078102
Alignment:
Q  82 gtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||| |||||||||||||||||||| || ||||| | ||| |||||||    
T  16078155 gtttctgatgctcaatcttcgacttctgacagactaaacaggaatacacaaact 16078102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 5979 - 6158
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  5979 ctccaacaaagtccatagaaatgctatcccacttccactctggaacaaacaacggttgcatcaaacccgacggtctctaatgttcaatcttcgatttctg 6078  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  6079 acaaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 6158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 924 - 747
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  924 ccaacaaaatccatagaaatgctatcccacttccactctggtacaaacaacaattgcatcaaacccgacggtttctgatgttcattcttcgacttctgac 825  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||||||| ||   ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  824 aaaccaaacaagcataaacaaagtcatcaatttccttcttcattctaggccaccaaaacaacctcttcaaatcctgat 747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 27768 - 27589
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  27768 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctg 27669  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  27668 acaaaccaaacaagcataaacaaactcagcaatctccttcttcatcccaggccaccaaaacaacctcttcaaatcttgat 27589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 20938 - 20818
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||| ||||| |||||||| || |||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  20938 acaaaatccatagaaatgctgtcccatttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 20839  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  20838 tcaaacacgcatagacaaact 20818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 46960 - 47137
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  46960 ccaacaaagtccatagaaatgctatcccacttccactcaggcacaaacaacggttgcatgaaacccgacggtctctgatgttcaatcttcgacttctgac 47059  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  47060 aaaccaaacaagcataaacaaactcagcaatttcctccttcattccaggccaccaaaacaacctcttcaaatcttgat 47137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 133; Significance: 2e-69; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 24695 - 24863
Alignment:
Q  21 tccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 120  Q
    |||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695 tccatagagatattatcccacttccactctggtacaaacaacgattgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 24794  T
Q  121 aagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||| |||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24795 aagcatacacaaactcagcaatttacttcttcattccaggccaccaaaacaacctcttcaaatcctgat 24863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 173
Target Start/End: Original strand, 232370 - 232522
Alignment:
Q  21 tccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 120  Q
    |||||||| || ||||||||||||||||| |  |||||||| ||||||||||||| |||||  || |||||||||||||| ||||||| |||||||||||    
T  232370 tccatagagatactatcccacttccactccgacacaaacaatggttgcatcaaactcgacgacttttgatgttcaatctttgacttctaacaaaccaaac 232469  T
Q  121 aagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaac 173  Q
    ||||||| ||||||||||   | ||||| ||||||| ||||||| ||||||||    
T  232470 aagcatacacaaactctgctctatccttattcattctaggccaccaaaacaac 232522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 10098 - 10277
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||| || ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  10098 ctccaacaaaatccatagagatactatcccacttccacactggcacaaacaacggttgcatcaaaccctacggtttctgatgttcaatcttcgatttctg 10197  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||||||||| ||||  || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  10198 acaaaccaaacaagcataaacaaattctgcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 10277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 9361 - 9187
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||    
T  9361 ccaacaaagtccatagaaatgctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctaac 9262  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 186  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  9261 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcct 9187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 106074 - 105896
Alignment:
Q  11 tccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 110  Q
    ||||||||  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||    
T  106074 tccaacaaagtccatagaaatgctttcccacttccactctggcacaaacaacggttgcatcaaacccgacagtctctgatgttcaatcttcgatttctga 105975  T
Q  111 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  105974 caaaccaaacaagcatatacaaactcagcaatttccttcttcattccaggccaccaaaagaacctcttcaaatcctgat 105896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 13714 - 13891
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| | |||||||||||| |||||||    
T  13714 ccaacaaagtccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgttattcaatcttcgatttctgac 13813  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  13814 aaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 13891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 1e-67; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 9291610 - 9291787
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||| ||    
T  9291610 ccaacaaagtccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttcttac 9291709  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  9291710 aaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaaccttttcaaatcttgat 9291787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 15292657 - 15292478
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  15292657 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctg 15292558  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||||||| |||| |  || |||||||||||||||| |||| |||||||||| |||||||| ||||    
T  15292557 acaaaccaaacaagcataaacatactcagcgatctccttcttcattccagaccaccaaaacaaccttttcaaatcttgat 15292478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 14998091 - 14998268
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  |||||| |||| ||||| |||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  14998091 ccaacaaagtccataaaaatactatctcacttccactttggcacaaacaacggttgcatccaacccgacggtctctgatgttcaatcttcgatttctgac 14998190  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||| |  || ||||||||||||||||||||| |||||||||| |||||||| ||||    
T  14998191 aaaccaaacaagcataaacaaactcagcgatctccttcttcattccaggccaccaaaacaaccttttcaaatcttgat 14998268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 13248420 - 13248597
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  13248420 ccaacaaagtccatagaaatacaatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatattcaatcttcgatttctgac 13248519  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||||||||||   ||| ||||||||||||  | || || ||||||||||||||||||| ||||    
T  13248520 aaaccaaacaagcataaacaaactcaaaaatatccttcttcattaaaagcaaccaaaacaacctcttcaaatcttgat 13248597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 12342353 - 12342185
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    ||||||||| |||||||||||||||||||| || ||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||||||||||| ||||    
T  12342353 atccatagagatgctatcccacttccactccggcacaaaaaacgattgcatcaaactcga-gacttctgatgttcaatcttcgacttctgacaaatcaaa 12342255  T
Q  120 caagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||| ||| | ||  || |||||||||||||||||||| ||||| |||||||||||||||||||    
T  12342254 caagcataaaaaaattatgcgatatccttcttcattccaggccagtaaaataacctcttcaaatcctgat 12342185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 189
Target Start/End: Original strand, 16028907 - 16029063
Alignment:
Q  33 ctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaa 132  Q
    |||||| ||||||| || || ||||| || ||||||| ||||||||||   |||||||||| ||| ||||||||||||||||||||||||||||| | ||    
T  16028907 ctatcctacttccagtcaggcacaaa-aatggttgcaacaaacccgacaacttctgatgttaaattttcgacttctgacaaaccaaacaagcatacataa 16029005  T
Q  133 actctgtaatttccttcttcattcca-ggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||| || ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  16029006 actctgttatatccttcttcattccagggccaccaaaacaaccttttcaaatcctgat 16029063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 38811703 - 38811803
Alignment:
Q  33 ctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaa 132  Q
    ||||||||||| ||||| || ||||||| |||| |||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  38811703 ctatcccactttcactcaggcacaaacagcggtcgcatcaaacccagcggcttctgatgttcaatcttcgatttctgacaaaccaaacaagtatacacaa 38811802  T
Q  133 a 133  Q
    |    
T  38811803 a 38811803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 20891765 - 20891880
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    ||||||||| || || |||||||||||||| ||||||  |||||||  |||||| || |  || |||||||| |||| ||| ||||||||||||| |||     
T  20891765 atccatagagatactgtcccacttccactccggtacatccaacggtgtcatcaaccctgtaggcttctgatgctcaaccttggacttctgacaaatcaag 20891864  T
Q  120 caagcataaacaaact 135  Q
    ||||||||||||||||    
T  20891865 caagcataaacaaact 20891880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 11206725 - 11206605
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  11206725 acaaaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 11206626  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  11206625 tcaaacaggcataaacaaact 11206605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 14691680 - 14691786
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || ||||||||||| |||||||||||||||   ||||||  |||||| || |  |||||||||||||||| ||| ||||| |||||||    
T  14691680 acaaaatccatggatatgctatcccatttccactctggtacatctaacggtgtcatcaaccctgcaggtttctgatgttcaacctttgacttttgacaaa 14691779  T
Q  115 ccaaaca 121  Q
     ||||||    
T  14691780 tcaaaca 14691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 15147053 - 15147015
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15147053 ggtttctgatgttcaatcttcgacttctgacaaaccaaa 15147015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 3264288 - 3264168
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  3264288 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 3264189  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  3264188 tcaaacaggcataaacaaact 3264168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 15078413 - 15078533
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| |||||| | ||||||||||||||||| |||   || |||  ||| || || |  || ||||||||||||| ||| |||||||||||||    
T  15078413 acaaaatccatggaaatgttgtcccacttccactctggcacatctaatggtgtcattaaccctgcaggcttctgatgttcaaccttagacttctgacaaa 15078512  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  15078513 tcaaacatgcataaacaaact 15078533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 15246702 - 15246822
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  15246702 acaaaatccatagaaatgctatcccacttccactccggcacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 15246801  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  15246802 tcaaacatgcatagacaaact 15246822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 18226614 - 18226560
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  18226614 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 18226560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 16354613 - 16354579
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaac 115  Q
    |||||||||||||||||||||||||| ||||||||    
T  16354613 ggtttctgatgttcaatcttcgacttgtgacaaac 16354579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 44661360 - 44661246
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || ||||||||||||||||| ||||||   ||||||  || ||| ||||  || |||||||| |||  ||| ||||||||||| |    
T  44661360 acaaaatccatagagatactatcccacttccactccggtacatctaacggtgtcaacaaccccgcaggcttctgatgctcagccttggacttctgacaga 44661261  T
Q  115 ccaaacaagcataaa 129  Q
     |||||| |||||||    
T  44661260 tcaaacaggcataaa 44661246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 12524520 - 12524573
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaac 134  Q
    ||||||||||| ||||  ||||||||||||||||||||||| | ||| ||||||    
T  12524520 ggtttctgatgctcaactttcgacttctgacaaaccaaacaggaatacacaaac 12524573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 33223701 - 33223821
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || ||||||||||| || ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||     
T  33223701 acaaaatccatagagatactgtcccacttccattccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaag 33223800  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  33223801 tcaaacatgcatacacaaact 33223821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 6e-67; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 20652264 - 20652096
Alignment:
Q  21 tccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 120  Q
    |||||||| || |||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20652264 tccatagagatactatcccacttccactctagcacaaacaatggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaagc 20652165  T
Q  121 aagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||| |||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20652164 aagcatacacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 20652096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 16877037 - 16876858
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  16877037 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctg 16876938  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||  ||| |||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  16876937 acaaaccaagtaagaataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 16876858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 21196444 - 21196265
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||| || ||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  21196444 ctccaacaaaatccatagagatactatcccacctccactatggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatttttgacttctg 21196345  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||||||||| |||||||| |||||||||||||||    
T  21196344 acaaaccaaacaagcataaacaaactatgcaatttcctttttcattccaggccaccaaaacaacatcttcaaatcctgat 21196265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 21850279 - 21850100
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  21850279 ctccaacaaaatccatagaaatgctatcccatttccactatggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 21850180  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| |||||||||||||||||||||  ||||||||| |||||||| ||||    
T  21850179 acaaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccgaaacaaccttttcaaatcttgat 21850100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 23156954 - 23156775
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23156954 ctccaacaaaatccatagagatactatcccacttccaatctggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctg 23156855  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||| | ||||| |  | ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23156854 acaaaccaaacaagcaaacacaaatttcgcaatctccttcttcattccaggccacaaaaacaacctcttcaaatcctgat 23156775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 22316030 - 22316209
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||| ||  | ||||||||||||||||| |||||||||||||||||||||| ||| | ||||| |||||||||||||||||||||    
T  22316030 ctccaacaaagtccatagagatattgtcccacttccactctggcacaaacaacggttgcatcaaactcgatgatttctaatgttcaatcttcgacttctg 22316129  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22316130 acaaaccaaacaagcataaacaaactctgtgatctccttcttcattccaggccaccaaaacaatctcttcaaatcctgat 22316209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 157
Target Start/End: Original strand, 22983272 - 22983419
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  22983272 ctccaacaaaatccatagagatactatcccaattccactctggcacaaacaacggttgcatcaaaccctgcggtttctgatgttcaatcttcgacttctg 22983371  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattcc 157  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||    
T  22983372 acaaaccaaacaagcatatacaaactcagcaatttccttcttcattcc 22983419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 25282971 - 25283148
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    ||||||| ||||||| | || |||||| |||||||||| || |||||||||||||||||||||||| ||   ||||||||||||||||| ||||||||||    
T  25282971 ccaacaaaatccatatagatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctgac 25283070  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||| ||||||||||  || |||||||||||||| |||||| |||||||| |||||||||||||||    
T  25283071 aaaccaaacaagcatacacaaactctgatatatccttcttcattcctggccaccaaaacaacttcttcaaatcctgat 25283148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 25283205 - 25283374
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    ||||||| | || |||||| |||||||||| || |||||||||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||||    
T  25283205 atccatatagatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctgacaaaccaaa 25283304  T
Q  120 caagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||| ||||||||    || |||||||||||||| |||||| |||||||  |||||||||||||||    
T  25283305 caagcatacacaaactcctatatatccttcttcattcctggccaccaaaacaatttcttcaaatcctgat 25283374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 22283843 - 22284022
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||| ||||  |||| ||||||||||| || | ||||||||||||| |||||||||| |  ||||||||||||||||| ||||||||    
T  22283843 ctccaacaaaatccatataaatattatctcacttccactcaggaataaacaacggttgcgtcaaacccgaagacttctgatgttcaatcttagacttctg 22283942  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||| | |||||||||||| |||||||| |  || ||||||||||||||| ||||| |||||||| |||||| ||||||||    
T  22283943 acagatcaaacaagcatacacaaactcagctatatccttcttcattccatgccaccaaaacaacttcttcagatcctgat 22284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 23901138 - 23901218
Alignment:
Q  34 tatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  23901138 tatcccacttccaatctagcacaaacaacggttgcatcaaacccgacgatttatgatgttcaatcttcgacttctgacaaa 23901218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 22366605 - 22366482
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    ||||||| |||||| ||||| ||||||||||||||||| || ||||| || ||||||||||  || |||||  ||||||| || ||||| || |||||||    
T  22366605 ccaacaaaatccatcgaaatactatcccacttccactccggcacaaaaaatggttgcatcactcctgacggcatctgatgctcgatcttagatttctgac 22366506  T
Q  112 aaaccaaacaagcataaacaaact 135  Q
    |||||||||||||| | |||||||    
T  22366505 aaaccaaacaagcaaacacaaact 22366482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 19978877 - 19978931
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  19978877 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 19978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 21166407 - 21166355
Alignment:
Q  83 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||||||||||||||||||||| |||||||||| | ||| |||||||    
T  21166407 tttctgatgttcaatcttcgacttctgataaaccaaacaggaatacacaaact 21166355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 21251851 - 21251911
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaa 141  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| ||||||| |||||    
T  21251851 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatatacaaactgtgtaa 21251911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 22061370 - 22061250
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  ||  || || |  || ||||||||||||| |||  |||||||||||     
T  22061370 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaataaccctgcaggcttctgatgttcaaccttaaacttctgacaag 22061271  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  22061270 tcaaacatgcatacacaaact 22061250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 12305607 - 12305722
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    ||||||||| || || |||||||||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||  |||    
T  12305607 atccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgatcaaccttagacttctgacaaataaaa 12305706  T
Q  120 caagcataaacaaact 135  Q
    |||||||||| |||||    
T  12305707 caagcataaaaaaact 12305722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 16407917 - 16407883
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaac 115  Q
    |||||||||||||||||||||||||||||||||||    
T  16407917 ggtttctgatgttcaatcttcgacttctgacaaac 16407883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 21393736 - 21393682
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| |||||||||||| |||| |||||||||||| |||||||    
T  21393736 ggtttctgatgctcaaccttcgacttctggcaaatcaaacaagcatacacaaact 21393682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 21788230 - 21788176
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| |||||||||||| |||| |||||||||||| |||||||    
T  21788230 ggtttctgatgctcaaccttcgacttctggcaaatcaaacaagcatacacaaact 21788176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 30313015 - 30312961
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  30313015 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatagacaaact 30312961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 31416411 - 31416293
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  31416411 acaaaatccatagaaatgctatcccacttccactccggcacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 31416312  T
Q  115 ccaaacaagcataaacaaa 133  Q
     ||| || |||||||||||    
T  31416311 tcaagcatgcataaacaaa 31416293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 31570779 - 31570681
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||| |||  || ||| || |  |||||||| ||||||| ||| ||||||||||||    
T  31570779 acaaaatccatagaaatgctatcccatttccactccggtacatccaatggtgtcaacaatcctgcaggtttctggtgttcaaccttagacttctgacaa 31570681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 803610 - 803490
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||| |||| || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  803610 acaaaatccgtagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 803511  T
Q  115 ccaaacaagcataaacaaact 135  Q
    ||||||| |||||||| ||||    
T  803510 ccaaacaggcataaacgaact 803490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 6604502 - 6604622
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| || |   | |||||||| |||| ||| |||||||||||||    
T  6604502 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcatgcttctgatgctcaaccttggacttctgacaaa 6604601  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  6604602 tcaaacaggcataaacaaact 6604622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 6679955 - 6680075
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| || |   | |||||||| |||| ||| |||||||||||||    
T  6679955 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcatgcttctgatgctcaaccttggacttctgacaaa 6680054  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  6680055 tcaaacaggcataaacaaact 6680075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 16271161 - 16271041
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| |  |  || |||||||| |||| ||| |||||||||||||    
T  16271161 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccttgcaggcttctgatgctcaaccttggacttctgacaaa 16271062  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  16271061 tcaaacaggcataaacaaact 16271041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 21043355 - 21043407
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||||||| |||| |||||| ||||||||||||||||||| ||| |||||    
T  21043355 ggtttctgatgctcaaccttcgatttctgacaaaccaaacaagaatacacaaa 21043407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 22040771 - 22040823
Alignment:
Q  83 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  22040771 tttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 22040823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 22365754 - 22365694
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatca 72  Q
    ||||||| |||||| |||||  |||||||||||||||| || |||||||| ||||||||||    
T  22365754 ccaacaaaatccatcgaaatattatcccacttccactccggcacaaacaatggttgcatca 22365694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 22371784 - 22371904
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| |||||| | |||||||||||||| || |||   ||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  22371784 acaaaatccatggaaatgttgtcccacttccactcaggcacatctaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 22371883  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  22371884 tcaaacatgcataaacaaact 22371904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 27355461 - 27355512
Alignment:
Q  84 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||| |||| ||| ||||||||||||| |||||| |||||||||||||    
T  27355461 ttctgatgctcaaccttggacttctgacaaatcaaacaggcataaacaaact 27355512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 22051707 - 22051748
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtaca 56  Q
    |||| ||||||||||||||||||||| |||||||| ||||||    
T  22051707 acaaaatccatagaaatgctatcccatttccactccggtaca 22051748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 15534290 - 15534330
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 121  Q
    ||||||||||| |||||||| |||||||||||||| |||||    
T  15534290 ggtttctgatgctcaatctttgacttctgacaaactaaaca 15534330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 266 - 445
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  266 ctccaacaaaatccatagaaatgctatcccaaatccactctggaacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctg 365  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||| || |||||||||||||||||| ||||||||||||||||||| ||||    
T  366 acaaaccaaacaagcataaacaaactcagcaatatcattcttcattccaggccaccaaaacaacctcttcaaatcttgat 445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 14239 - 14060
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| || ||||     
T  14239 ctccaacaaagtccatagaaatactatcccacttccactctggcacaaacaacgtttgcatcaaacccgacggtctctgatgttcaatctttgatttcta 14140  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  14139 acaaaccaaacaagcataaacaaactcttcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 14060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 18851 - 19030
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||||||||| | | ||| ||||||||||||||||||| |||||    
T  18851 ctccaacaaagtccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaacacaaaggtctctgatgttcaatcttcgatttctg 18950  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  18951 acaaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 19030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 128; Significance: 2e-66; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 71993 - 72172
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  71993 ctccaacaaagtccatataaatgctatcccacttccactctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttcta 72092  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||| ||||| ||||  || ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  72093 acaaaccaaacaagcatatacaaattctgcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 72172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 32915 - 32736
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||||| ||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  32915 ctccaacaaagtccatagaaaggctatcccacttccactctggaacaaacaatggttacatcaaacctgacggtttctgatgttcaatcttcgacttctg 32816  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||| ||||||| || ||||  ||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  32815 acaaaccaaacaaccataaacgaattctgcgatttccttcatcattcctggccaccaaaacaacctcttcaaatcctgat 32736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 24767 - 24945
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||| |||| ||| ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24767 ctccgacaaaatcgatagagatactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttttg 24866  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||| |||||||| ||||||||   ||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  24867 acaaaccaatcaagcatatacaaactcatcaatttccttcttcattccaggtcac-caaacaacctcttcaaatcctgat 24945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 126; Significance: 3e-65; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 3444 - 3267
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  ||||||||||||||||||||||||||||| || |||||||||||||||||||||| || |||| |||||| |||||||||||| |||||||    
T  3444 ccaacaaagtccatagaaatgctatcccacttccactccggcacaaacaacggttgcatcaaactcgtcggtctctgattttcaatcttcgatttctgac 3345  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3344 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 3267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 124; Significance: 5e-64; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 9790 - 9969
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||||||||| ||  |||| |||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||     
T  9790 ctccaacaaaatccatagagatattatctcacttccactctggcacaaacaatggttgcatcaaacccgacggttttttatgttcaatcttcgatttcta 9889  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9890 acaaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 9969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 124; Significance: 5e-64; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 3966 - 4141
Alignment:
Q  14 aacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  3966 aacaaaatccatagaaatgctatcccacttccactctggcacgaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttcggacaa 4065  T
Q  114 accaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||| ||||||||| |||||||| | ||||||||||||||||||||||||  ||||||| ||||||||||| ||||    
T  4066 accagacaagcatatacaaactcagcaatttccttcttcattccaggccatcaaaacaatctcttcaaatcatgat 4141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 124; Significance: 5e-64; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 453 - 632
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||    
T  453 ctccaacaaaatccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaactcgacggtctctgatgttcaatcttcgacttttg 552  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||| ||| | || |  || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  553 acaaaccaaacaagcatagacatattcagcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 122; Significance: 8e-63; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 15462 - 15639
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||    
T  15462 ccaacaaattccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgataaatcttcgatttctgac 15561  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||    ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15562 aaaccaaacaagcataaacaaactaaacaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 15639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 44342 - 44408
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacc 76  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44342 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacc 44408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 121; Significance: 3e-62; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 55391 - 55223
Alignment:
Q  21 tccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 120  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  55391 tccatagaaatgctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcaatttctgacaaaccaaac 55292  T
Q  121 aagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||| |||||| | ||| ||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  55291 aagcataaaaaaactcagcaatatccatcttcattccaggccaccaaaacaacctcttcaaatcttgat 55223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 28803 - 28749
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  28803 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 28749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 551 - 380
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||    
T  551 acaaaatccatagagatactatcccactttcactctggcacaaacaagggttgcatcaaacccgacggtttctgatgttcaatcttcgattttttacaaa 452  T
Q  115 ccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 186  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  451 ccaaacaagcatatacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcct 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 117; Significance: 8e-60; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 21 - 173
Target Start/End: Original strand, 180739 - 180891
Alignment:
Q  21 tccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 120  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  180739 tccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaac 180838  T
Q  121 aagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaac 173  Q
    |||||||||||||||| | ||| ||||||||||||| ||||||| ||||||||    
T  180839 aagcataaacaaactcagcaatctccttcttcattcaaggccaccaaaacaac 180891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 195201 - 195083
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||| |||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  195201 acaaaatccatagaaatgctatccaacttccactccggcacatccaacggtgtcaacaaccctgtaggcttctgatgttcaaccttagacttctgacaag 195102  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  195101 tcaaacatgcatacacaaa 195083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 8392 - 8213
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||||||||  |||||||||||||| ||| ||||||||||| | |||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||    
T  8392 ctccaacaaagtccatagaaatgctgtccaacttccactctagcacaaacaacggttgtatcaaacccggcggtttctaatgttcaatctttgacttctg 8293  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    || |||||||||||||||||||||||| | || |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  8292 acgaaccaaacaagcataaacaaactcagcaaattccttcttcattctaggccaccaaaacaacctcttcaaatcctgat 8213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 3357 - 3525
Alignment:
Q  21 tccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 120  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || || ||||||| |||||    
T  3357 tccatagaaatattatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttttgacaaagcaaac 3456  T
Q  121 aagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||   ||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3457 aagcataaacaaactcaccaatctccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 3525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 34 - 189
Target Start/End: Original strand, 7997 - 8152
Alignment:
Q  34 tatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||||||||||||||| |||||||||| |||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||||||||||||    
T  7997 tatcccacttccactctggcacaaacaacgattgcatcaaacctgacggtctatgatgttcaatcttcgacttatgacaaaccaaacaagcataaacaaa 8096  T
Q  134 ctctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
     || | ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8097 ttccgcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 8152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 296 - 470
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    ||||||| ||||||||| ||| ||||||||||||  ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  296 ccaacaaaatccatagatatgttatcccacttccgttctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttccaac 395  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    ||||||||||||||||||||||||||| ||   ||| |||||||||||||||| ||||||||||||| ||||||||||    
T  396 aaaccaaacaagcataaacaaactctgcaa---cctccttcattccaggccaccaaaacaacctctttaaatcctgat 470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 106; Significance: 3e-53; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 26612 - 26789
Alignment:
Q  12 ccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 111  Q
    |||||||  |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||  || ||||||||||||||||||| |||| ||    
T  26612 ccaacaaagtccatagaaatgttatcccacttccattctggcacaaacaacggttgcatcaaacccgatagtctctgatgttcaatcttcgatttcttac 26711  T
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||| ||||||||||||| || |  || ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  26712 aaaccaaataagcataaacaaaatcagcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcatgat 26789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 10954 - 10842
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  |||||||  || ||| || |  ||  |||||||||||| ||| ||||| ||||||     
T  10954 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcctctgatgttcaaccttagacttttgacaag 10855  T
Q  115 ccaaacaagcata 127  Q
     |||||| |||||    
T  10854 tcaaacatgcata 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 21168 - 21056
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  |||||||  || ||| || |  ||  |||||||||||| ||| ||||| ||||||     
T  21168 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcctctgatgttcaaccttagacttttgacaag 21069  T
Q  115 ccaaacaagcata 127  Q
     |||||| |||||    
T  21068 tcaaacatgcata 21056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 7311 - 7131
Alignment:
Q  10 ctccaacaatatccatagaaatgctat-cccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttct 108  Q
    ||||||||| |||||| |||||||||| |||| ||||||| ||| |||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||    
T  7311 ctccaacaaaatccatggaaatgctatacccatttccactttggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttct 7212  T
Q  109 gacaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||| ||| ||||||||||||| |  || ||||||||||||||||||||| |||||||||| |||||||||||||    
T  7211 gacaaaccaagcaaacataaacaaactcagcgatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 7131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 13007 - 13125
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| |||||| |||||     
T  13007 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttcagacaag 13106  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  13107 tcaaacatgcatacacaaa 13125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 8069 - 8248
Alignment:
Q  10 ctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    ||||||||| ||| ||||| || |||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||| || ||||||||| || ||    
T  8069 ctccaacaaaatctatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacctaacggtttctgatatttaatcttcgatttttg 8168  T
Q  110 acaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||| ||||||||||||||||| ||||  || ||||||||||||||||||||| |||||| |||||||||||||||||    
T  8169 acaaacaaaacaagcataaacaaattctgcgatctccttcttcattccaggccaccaaaacagcctcttcaaatcctgat 8248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 45312 - 45418
Alignment:
Q  21 tccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 120  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  45312 tccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttaaatcttcgatttctgacaaaccaaac 45411  T
Q  121 aagcata 127  Q
    |||||||    
T  45412 aagcata 45418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 75403 - 75541
Alignment:
Q  51 ggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaatttccttct 150  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||||| ||||| ||||||| |||||||||||| |||||||  || || |||||||    
T  75403 ggtacaaacaacggttgcatccaacccgatggcttctgatgttcaatcttagacttttgacaaagcaaacaagcatatacaaacttcgttatatccttct 75502  T
Q  151 tcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||| ||||||| ||||||||||| ||||    
T  75503 tcattccaggccaccaaaacaatctcttcaaatcatgat 75541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 19929 - 20049
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  19929 acaaaatccatagaaatgctatcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaacctttgacttctgacaag 20028  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  20029 tcaaacatgcatacacaaact 20049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 34 - 189
Target Start/End: Complemental strand, 9545 - 9390
Alignment:
Q  34 tatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    |||| |||||| |||| |||||||||||| ||| |||||||   ||||| ||||| || |||||||||||||| |||||||||||||||||||| |||||    
T  9545 tatctcacttctactcaggtacaaacaacagttacatcaaatatgacggcttctgctgctcaatcttcgacttttgacaaaccaaacaagcatacacaaa 9446  T
Q  134 ctctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    || |   || ||||||||||||||| |||| |||||||||||||||||||||||||    
T  9445 cttttctatatccttcttcattccatgccattaaaacaacctcttcaaatcctgat 9390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 23082 - 23159
Alignment:
Q  112 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 189  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||    
T  23082 aaaccaaacaagcataaataaactctgcaatttccttcttcattccaggccactaaaacaacttcatcaaatcctgat 23159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 14941 - 15028
Alignment:
Q  9 tctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaa 96  Q
    |||||||||| ||||||||| ||   |||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||    
T  14941 tctccaacaaaatccatagagatatgatcccacttccactttggcacaaacaatggttgcatcaaacctgacggtttctgatgttcaa 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 6735 - 6617
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| ||||||  || ||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  6735 acaaaatccatagaaatgctatcccacttccactccggtacatccagcggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 6636  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  6635 tcaaacatgcatacacaaa 6617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 13796 - 13678
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||  || ||| |  |  || ||||||||||||| ||| |||||||| |||     
T  13796 acaaaatccatagaaatgctatcccacttccactctggtacatccaacggtgtcaacaaccttgcaggcttctgatgttcaaccttagacttctggcaag 13697  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  13696 tcaaacatgcatacacaaa 13678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 19477 - 19531
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  19477 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 19531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 34901 - 34955
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  34901 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 34955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 51677 - 51559
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  51677 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 51578  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  51577 tcaaacacgcatatacaaa 51559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 60711 - 60593
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  60711 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 60612  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  60611 tcaaacacgcatatacaaa 60593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 67099 - 66981
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  67099 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 67000  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  66999 tcaaacacgcatatacaaa 66981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 196909 - 196855
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  196909 ggtttctgatgctcaatcttcgacttctgacaaaccaaacaagaatacacaaact 196855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 7642 - 7522
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| ||||||||  |||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  7642 acaaaatccatagaaatgctatcccatttccactccagtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaac 7543  T
Q  115 ccaaacaagcataaacaaact 135  Q
     ||| ||||||||||||||||    
T  7542 tcaagcaagcataaacaaact 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 101049 - 100929
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||  | |||||||||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| |||||||||||||    
T  101049 acaaaatccatagaaatattgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaaa 100950  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  100949 tcaaacacgcatacacaaact 100929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 181074 - 181128
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||| |||||||    
T  181074 ggtttctgatgttcgatcttcgacttctgacaaaccaaacaggaatacacaaact 181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 278261 - 278221
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 121  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  278261 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 278221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 261117 - 261237
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  ||||||   || ||| || |  || |||||||||||||  || ||||||||||||     
T  261117 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggcgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaag 261216  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  261217 tcaaacatgcatacacaaact 261237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 3069 - 3123
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| |||||||    
T  3069 ggtttctgatgttcaatcgtcgacttctgacaaaccaaacaggaatacacaaact 3123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 12303 - 12409
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || ||||||||||| |||||||||||||||   ||||||  |||||| || |  |||||||||||||||| ||| ||||| |||||||    
T  12303 acaaaatccatggatatgctatcccatttccactctggtacatctaacggtgtcatcaaccctgcaggtttctgatgttcaacctttgacttttgacaaa 12402  T
Q  115 ccaaaca 121  Q
     ||||||    
T  12403 tcaaaca 12409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 11554 - 11436
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||| ||||||     
T  11554 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttttgacaag 11455  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  11454 tcaaacatgcatacacaaa 11436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 15324 - 15206
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||| ||||||     
T  15324 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttttgacaag 15225  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  15224 tcaaacatgcatacacaaa 15206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 20797 - 20890
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 113  Q
    ||||||||||||| | |||||||||||||| || |||  |||||||  |||||| || |  || |||||||| |||| ||| ||||||||||||    
T  20797 atccatagaaatgttgtcccacttccactccggcacatccaacggtgtcatcaaccctgtaggcttctgatgctcaaccttagacttctgacaa 20890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 24373 - 24427
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| |||||||    
T  24373 ggtttctgatgttcaatcatcgacttctgacaaaccaaacaggaatacacaaact 24427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 39317 - 39211
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || || |||||||| ||||||||||| |||   || | |  ||||||||| |  ||||||||||||||||||||||||||||||||||    
T  39317 acaaaatccatggatatactatcccatttccactctggcacatctaaggataccatcaaaccagcgggtttctgatgttcaatcttcgacttctgacaaa 39218  T
Q  115 ccaaaca 121  Q
    | |||||    
T  39217 ctaaaca 39211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 4450 - 4332
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  |||||||  || ||| || |  || || |||||||||| ||| ||||||||||||     
T  4450 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttttgatgttcaaccttagacttctgacaag 4351  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  4350 tcaaacacgcatacacaaa 4332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 133 - 253
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgac-ggtttctgatgttcaatcttcgacttctgacaa 113  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || | ||||| || || |||||||||||||  || ||||||||||||    
T  133 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaac-aaccctacaggcttctgatgttcaactttagacttctgacaa 231  T
Q  114 accaaacaagcataaacaaact 135  Q
      |||||| ||||| |||||||    
T  232 gtcaaacatgcatacacaaact 253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 19433 - 19380
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaac 134  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  19433 ggtttctgatgctcaatcttcgacttctggcaaatcaaacaagcatacacaaac 19380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 41731 - 41844
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    |||||||||||||||||||||||||||||| || | |  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||  ||||    
T  41731 atccatagaaatgctatcccacttccactccggcatatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaagtcaaa 41830  T
Q  120 caagcataaacaaa 133  Q
    || ||||| |||||    
T  41831 catgcatacacaaa 41844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 558 - 439
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| ||||||||||||||||||||||| ||||||   ||||||  || ||| || |   | ||||||||||||| ||| |||||||||||||    
T  558 acaaaatccatggaaatgctatcccacttccactcaggtacatctaacggtgtcaacaa-cctgcatgcttctgatgttcaaccttagacttctgacaaa 460  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  459 tcaaacatgcatatacaaact 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 571 - 679
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttca 180  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| ||||| | || ||  || |  |||| ||||| |||| |||||||| ||||||    
T  571 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaattgtgcaacatcgtgtttcaatccagaccaccaaaacaacttcttca 670  T
Q  181 aatcctgat 189  Q
    |||| ||||    
T  671 aatcatgat 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 27333 - 27453
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| |||||||||||||||||||||||||| |||   ||| ||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  27333 acaaaatccatggaaatgctatcccacttccactctggcacatctaacagtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 27432  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  27433 tcaaacatgcataaacaaact 27453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 37; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 44314 - 44426
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||     
T  44314 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaatttagacttctgacaag 44413  T
Q  115 ccaaacaagcata 127  Q
     |||||| |||||    
T  44414 tcaaacatgcata 44426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 45326 - 45438
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||     
T  45326 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaatttagacttctgacaag 45425  T
Q  115 ccaaacaagcata 127  Q
     |||||| |||||    
T  45426 tcaaacatgcata 45438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 14848 - 14968
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || || |||||||| ||||||||||| |||   |||| |  ||||| ||| |  ||||||||||| |||| ||||||||||| |||||    
T  14848 acaaaatccatggatatactatcccatttccactctggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctaacaaa 14947  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||||||||| |||||||    
T  14948 tcaaacaagcatacacaaact 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 81329 - 81209
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||| ||||     
T  81329 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctcacaag 81230  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  81229 tcaaacatgcatacacaaact 81209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 229918 - 229970
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||    
T  229918 ggtttctgatgctcaattttcgacttctgacaaaccaaacaagaatacacaaa 229970  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 41830 - 41710
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||| || || |||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  41830 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 41731  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| |||||||||||||    
T  41730 tcaaacaggcataaacaaact 41710  T

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Target: scaffold0249 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 1464 - 1349
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    |||||| |||||||||||||||||||||||||| |||   || |||  || ||| || |  || |||||||| |||| ||| ||||||||||||  ||||    
T  1464 atccatggaaatgctatcccacttccactctggcacatctaatggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaagtcaaa 1365  T
Q  120 caagcataaacaaact 135  Q
    || |||||||||||||    
T  1364 catgcataaacaaact 1349  T

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Target: scaffold0190 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 32811 - 32696
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    |||||||||||| || |||||||||||||| ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||  ||||    
T  32811 atccatagaaatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaagtcaaa 32712  T
Q  120 caagcataaacaaact 135  Q
    || ||||| |||||||    
T  32711 catgcatacacaaact 32696  T

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Target: scaffold0742 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 6022 - 6116
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 109  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || |||||| |  || |||||||| |||| ||| ||||||||    
T  6022 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaacctgcaggcttctgatgctcaaccttagacttctg 6116  T

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Target: scaffold0676 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 6889 - 6943
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||||||||| ||||||||| ||||||| |||||||| ||| |||||||    
T  6889 ggtttctgatgttcaaccttcgacttatgacaaatcaaacaagaatacacaaact 6943  T

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Target: scaffold0546 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 3836 - 3782
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  3836 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 7762 - 7708
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||| |||||||    
T  7762 ggtttctgatgttcaaccttcgacttctaacaaatcaaacaagaatacacaaact 7708  T

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Target: scaffold0375 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 3245 - 3203
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  3245 ggtttctgacgttcagtcttcgacttctgacaaaccaaacaag 3203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 13343 - 13397
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  13343 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 13397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 7869 - 7987
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||| |||||||||||||||||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||| ||     
T  7869 acaaaatccagagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgataag 7968  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  7969 tcaaacatgcatacacaaa 7987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 28034 - 28152
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||||||||||||||||||||||||||| || |||  |||||||  || ||| |  |  || |||||||| |||| ||| ||||||||||||     
T  28034 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccgtgcaggcttctgatgctcaaccttagacttctgacaag 28133  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||| ||||| |||||    
T  28134 tcaaacatgcatacacaaa 28152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 9471 - 9525
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  9471 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 9525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 33004 - 32950
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||||||| ||| |||||||||||||||| | ||| |||||||    
T  33004 ggtttctgatgctcaatctttgacctctgacaaaccaaacaggaatacacaaact 32950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 15235 - 15289
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  15235 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 15289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 63462 - 63408
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||| |||||||||||||||||||||||||||| |||| | ||| |||||||    
T  63462 ggtttcttatgttcaatcttcgacttctgacaaacctaacaggaatacacaaact 63408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 27139 - 27188
Alignment:
Q  84 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 133  Q
    |||||||| |||| ||| ||||||||||||| ||||||||||||||||||    
T  27139 ttctgatgctcaaccttggacttctgacaaatcaaacaagcataaacaaa 27188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 29820 - 29877
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctg 138  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| ||||||||||    
T  29820 ggtttctgatggtcaaccttcgatttctgacaaatcaaacaagaatacacaaactctg 29877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 4840 - 4960
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || ||||||||||| ||||||||| | ||| | || |||  ||||||||| |  ||||||||||| ||||  || |||||||||||||    
T  4840 acaaaatccatggatatgctatcccatttccactctagaacatataaaggtgtcatcaaacctgcaggtttctgatgctcaacttttgacttctgacaaa 4939  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| | ||| |||||||    
T  4940 tcaaacaggaatacacaaact 4960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 12277 - 12241
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtaca 56  Q
    ||||||||||||||||||||| |||||||||||||||    
T  12277 atccatagaaatgctatcccatttccactctggtaca 12241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 5832 - 5712
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||  || ||| || |  || ||||||| |||||  || ||||||| ||||     
T  5832 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgtaggcttctgatattcaactttagacttctaacaag 5733  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  5732 acaaacatgcatacacaaact 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 4949 - 4829
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||| ||||||| |||||||| | ||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||     
T  4949 acaaaatccatagaaatgttatcccatttccactccgatacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaag 4850  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||| ||||| |||||||    
T  4849 tcaaacatgcatacacaaact 4829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 731 - 612
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||| ||||||| ||||||||||||||   |||||||  || |||||| |  ||  |||||||||||| ||| |||||| || ||     
T  731 acaaaatccatagaaatgttatcccatttccactctggtacttccaacggtgtcaacaaacctgcaggcctctgatgttcaaccttagacttccgataag 632  T
Q  115 ccaaacaagcataaacaaac 134  Q
     |||||| ||||| ||||||    
T  631 tcaaacacgcatacacaaac 612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 1498 - 1444
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  1498 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 2342 - 2396
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| ||||||||| ||||||| |||||||| ||| |||||||    
T  2342 ggtttctgatgctcaaccttcgacttttgacaaatcaaacaagaatacacaaact 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 7181 - 7299
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || || |||||||| ||||||||||| |||   |||| |  ||||| ||| |  ||||| ||||| |||| |||||||||||||||||    
T  7181 acaaaatccatggatatactatcccatttccactctggcacatctaacgataccatcataccagcaggtttttgatgctcaaccttcgacttctgacaaa 7280  T
Q  115 ccaaacaagcataaacaaa 133  Q
     |||||||| ||| |||||    
T  7281 tcaaacaagaatacacaaa 7299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 6924 - 6978
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||| ||||||||||||||||| ||| |||| ||| |||||||    
T  6924 ggtttctgatgctcaaccttcgacttctgacaaatcaagcaagaatacacaaact 6978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 16530 - 16584
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  16530 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 22742 - 22796
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| |||||||| |||||||||||||| ||||| | ||| |||||||    
T  22742 ggtttctgatgctcaatctttgacttctgacaaactaaacaggaatatacaaact 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 3422 - 3364
Alignment:
Q  9 tctccaacaatatccatagaaatgctatcccacttccactctggtacaaacaacggttg 67  Q
    |||||||||| ||||||| | || |||||| |||||||||| || ||||||||||||||    
T  3422 tctccaacaaaatccatatatatactatcctacttccactccggcacaaacaacggttg 3364  T

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Target: scaffold0079 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 25849 - 25883
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaac 115  Q
    |||||||||||||||||||||||||| ||||||||    
T  25849 ggtttctgatgttcaatcttcgacttgtgacaaac 25883  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 57344 - 57294
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggt 65  Q
    |||| ||||||||||||||||||||| |||||||| ||||||  |||||||    
T  57344 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggt 57294  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 95494 - 95380
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 119  Q
    |||||||||||| |||||||| |||||||| ||||||  |||||||  || |||||| |  ||  ||||||||||||  || |||||||| |||  ||||    
T  95494 atccatagaaatactatcccatttccactccggtacatccaacggtgtcaacaaacctgcgggcctctgatgttcaactttagacttctggcaagtcaaa 95395  T
Q  120 caagcataaacaaac 134  Q
    || ||||| ||||||    
T  95394 catgcatacacaaac 95380  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 390631 - 390577
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 135  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  390631 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 390577  T

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Target: scaffold1355 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 1551 - 1604
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaac 134  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| ||||||    
T  1551 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaac 1604  T

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Target: scaffold0348 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 6993 - 7034
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtaca 56  Q
    |||| ||||||||||||||||||||| |||||||| ||||||    
T  6993 acaaaatccatagaaatgctatcccatttccactccggtaca 7034  T

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Target: scaffold0145 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 39442 - 39389
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaac 134  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| ||||||    
T  39442 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaac 39389  T

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Target: scaffold0071 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 48699 - 48654
Alignment:
Q  20 atccatagaaatgctatcccacttccactctggtacaaacaacggt 65  Q
    ||||||||||||||||||||| |||||||| ||||||  |||||||    
T  48699 atccatagaaatgctatcccatttccactccggtacatccaacggt 48654  T

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Target: scaffold0518 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 11578 - 11690
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| ||||||||||||| ||||||| |||||||| | ||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||     
T  11578 acaaaatccatagaaatgttatcccatttccactccgatacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaag 11677  T
Q  115 ccaaacaagcata 127  Q
     |||||| |||||    
T  11678 tcaaacatgcata 11690  T

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Target: scaffold0507 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 9779 - 9899
Alignment:
Q  15 acaatatccatagaaatgctatcccacttccactctggtacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 114  Q
    |||| |||||| || || |||||| | ||||||||||| |||   ||||||  |||||| || |  ||||| ||||| |||| ||| |||||||||||||    
T  9779 acaaaatccatggatatactatcctatttccactctggcacatctaacggtgtcatcaaccctgcaggtttttgatgctcaacctttgacttctgacaaa 9878  T
Q  115 ccaaacaagcataaacaaact 135  Q
     |||||||| ||| |||||||    
T  9879 tcaaacaagaatacacaaact 9899  T

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Target: scaffold0220 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 254 - 214
Alignment:
Q  81 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 121  Q
    ||||| ||||||||||||||||| ||||||||||| |||||    
T  254 ggtttgtgatgttcaatcttcgatttctgacaaactaaaca 214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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