View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7909_low_8 (Length: 430)

Name: NF7909_low_8
Description: NF7909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7909_low_8
NF7909_low_8
[»] chr4 (57 HSPs)
chr4 (13-413)||(50514501-50514893)
chr4 (131-321)||(35808374-35808565)
chr4 (156-321)||(55669704-55669870)
chr4 (162-294)||(45688714-45688847)
chr4 (132-294)||(33951638-33951804)
chr4 (132-321)||(26040338-26040521)
chr4 (156-321)||(23765543-23765709)
chr4 (192-321)||(34016626-34016756)
chr4 (156-321)||(41956191-41956357)
chr4 (166-308)||(10100104-10100247)
chr4 (166-278)||(19328950-19329062)
chr4 (162-309)||(51266895-51267043)
chr4 (162-321)||(2362600-2362762)
chr4 (167-321)||(31754914-31755069)
chr4 (183-309)||(32131134-32131261)
chr4 (162-268)||(47188697-47188803)
chr4 (166-309)||(34316712-34316857)
chr4 (156-319)||(30475390-30475554)
chr4 (167-289)||(20811239-20811362)
chr4 (163-321)||(27839284-27839443)
chr4 (164-321)||(26831764-26831921)
chr4 (164-321)||(31168107-31168265)
chr4 (166-279)||(53566971-53567087)
chr4 (156-324)||(54339078-54339246)
chr4 (166-297)||(40436056-40436188)
chr4 (163-268)||(45088042-45088144)
chr4 (171-259)||(32584560-32584648)
chr4 (234-321)||(51290473-51290561)
chr4 (171-262)||(52341581-52341672)
chr4 (171-279)||(35675211-35675319)
chr4 (165-243)||(9693528-9693606)
chr4 (226-295)||(19876187-19876257)
chr4 (162-263)||(15986237-15986338)
chr4 (162-263)||(20456540-20456641)
chr4 (172-295)||(30617930-30618054)
chr4 (172-251)||(1457584-1457663)
chr4 (209-275)||(3769831-3769897)
chr4 (195-265)||(35927309-35927379)
chr4 (162-279)||(31494682-31494799)
chr4 (162-279)||(51018400-51018517)
chr4 (216-279)||(35511201-35511264)
chr4 (224-309)||(31487754-31487840)
chr4 (172-279)||(30199807-30199914)
chr4 (206-265)||(52021047-52021106)
chr4 (171-265)||(966562-966656)
chr4 (206-280)||(13966574-13966648)
chr4 (130-263)||(36486723-36486856)
chr4 (206-263)||(39418155-39418212)
chr4 (171-263)||(39158363-39158455)
chr4 (207-263)||(46823488-46823544)
chr4 (216-263)||(49483122-49483169)
chr4 (221-263)||(11996140-11996182)
chr4 (193-279)||(13498138-13498224)
chr4 (206-279)||(27545877-27545950)
chr4 (215-279)||(23260728-23260793)
chr4 (206-251)||(25928454-25928499)
chr4 (210-263)||(53484634-53484687)
[»] chr3 (40 HSPs)
chr3 (164-321)||(32415542-32415700)
chr3 (160-321)||(36730131-36730293)
chr3 (164-311)||(8847440-8847588)
chr3 (166-328)||(46317461-46317624)
chr3 (167-321)||(8715480-8715634)
chr3 (167-321)||(9067367-9067521)
chr3 (162-309)||(35306303-35306451)
chr3 (163-321)||(44570364-44570523)
chr3 (157-295)||(51817316-51817455)
chr3 (164-321)||(25102300-25102457)
chr3 (172-295)||(4759854-4759978)
chr3 (166-312)||(10854834-10854985)
chr3 (166-330)||(37509086-37509251)
chr3 (166-321)||(29915553-29915709)
chr3 (166-321)||(29964706-29964862)
chr3 (175-321)||(44695649-44695796)
chr3 (157-279)||(12051004-12051126)
chr3 (166-275)||(20227405-20227514)
chr3 (167-290)||(12905292-12905415)
chr3 (166-279)||(52570755-52570870)
chr3 (165-249)||(31647278-31647362)
chr3 (171-288)||(21324496-21324612)
chr3 (222-321)||(1803919-1804019)
chr3 (171-263)||(34060803-34060895)
chr3 (206-295)||(18791-18881)
chr3 (193-263)||(41345977-41346047)
chr3 (206-279)||(18949-19022)
chr3 (172-295)||(45899547-45899672)
chr3 (195-262)||(11316970-11317037)
chr3 (215-259)||(26850535-26850579)
chr3 (206-264)||(34750293-34750351)
chr3 (232-321)||(48136701-48136790)
chr3 (171-279)||(11675293-11675399)
chr3 (206-279)||(39974827-39974900)
chr3 (206-251)||(50420699-50420744)
chr3 (179-254)||(46160500-46160575)
chr3 (209-256)||(49976185-49976232)
chr3 (178-264)||(271202-271288)
chr3 (220-262)||(6822837-6822879)
chr3 (206-263)||(12060096-12060153)
[»] chr1 (53 HSPs)
chr1 (156-321)||(27209696-27209862)
chr1 (169-321)||(34874545-34874698)
chr1 (163-309)||(11385953-11386100)
chr1 (163-321)||(41147453-41147612)
chr1 (162-295)||(4940741-4940875)
chr1 (156-321)||(7190450-7190616)
chr1 (160-321)||(22346212-22346374)
chr1 (166-309)||(49508721-49508864)
chr1 (169-294)||(28277484-28277610)
chr1 (160-321)||(43433744-43433906)
chr1 (173-321)||(47655346-47655495)
chr1 (162-279)||(50154444-50154561)
chr1 (171-294)||(49901906-49902030)
chr1 (164-279)||(6170569-6170684)
chr1 (167-312)||(932141-932287)
chr1 (166-321)||(2125682-2125838)
chr1 (162-321)||(24140744-24140903)
chr1 (172-294)||(33929947-33930070)
chr1 (161-309)||(11385797-11385946)
chr1 (183-294)||(42607326-42607438)
chr1 (165-268)||(47895308-47895411)
chr1 (164-321)||(31975460-31975618)
chr1 (162-295)||(52396414-52396547)
chr1 (195-323)||(4656020-4656149)
chr1 (193-318)||(40845253-40845379)
chr1 (182-321)||(28850885-28851024)
chr1 (198-309)||(32213876-32213988)
chr1 (164-295)||(45721728-45721857)
chr1 (169-295)||(29966800-29966928)
chr1 (182-295)||(50295434-50295549)
chr1 (162-309)||(8244068-8244207)
chr1 (183-321)||(26469557-26469696)
chr1 (206-278)||(41898878-41898950)
chr1 (171-258)||(17402928-17403015)
chr1 (166-279)||(48938611-48938723)
chr1 (171-279)||(51424137-51424245)
chr1 (156-279)||(14331802-14331925)
chr1 (156-279)||(44359690-44359813)
chr1 (171-297)||(40920165-40920294)
chr1 (183-249)||(44286864-44286930)
chr1 (206-295)||(41492924-41493013)
chr1 (156-279)||(43168106-43168229)
chr1 (184-248)||(30222613-30222678)
chr1 (172-258)||(27210705-27210792)
chr1 (221-279)||(5945450-5945508)
chr1 (206-279)||(16691309-16691382)
chr1 (167-279)||(8892789-8892901)
chr1 (168-212)||(9055897-9055941)
chr1 (216-254)||(44043500-44043538)
chr1 (194-239)||(10161024-10161069)
chr1 (206-251)||(46296231-46296276)
chr1 (206-262)||(23328437-23328493)
chr1 (171-251)||(34644145-34644225)
[»] chr7 (55 HSPs)
chr7 (162-321)||(29034658-29034818)
chr7 (169-294)||(24359713-24359839)
chr7 (166-323)||(5240308-5240466)
chr7 (160-297)||(42222190-42222328)
chr7 (183-321)||(40763241-40763380)
chr7 (161-321)||(46478537-46478694)
chr7 (161-294)||(8380411-8380545)
chr7 (132-321)||(27053471-27053662)
chr7 (158-321)||(7322931-7323095)
chr7 (162-321)||(1910215-1910374)
chr7 (160-321)||(8292714-8292876)
chr7 (183-309)||(43567496-43567623)
chr7 (166-295)||(22521561-22521691)
chr7 (172-262)||(29687457-29687547)
chr7 (167-295)||(49069531-49069660)
chr7 (160-295)||(41188790-41188926)
chr7 (196-293)||(3681699-3681797)
chr7 (163-321)||(36279094-36279250)
chr7 (172-321)||(5347950-5348097)
chr7 (181-321)||(30538458-30538596)
chr7 (191-321)||(22707049-22707179)
chr7 (215-309)||(48454812-48454907)
chr7 (183-295)||(43958087-43958200)
chr7 (183-249)||(40194818-40194884)
chr7 (182-308)||(8258634-8258756)
chr7 (192-279)||(46042749-46042835)
chr7 (170-295)||(40066921-40067045)
chr7 (171-256)||(44296945-44297030)
chr7 (194-258)||(31626083-31626147)
chr7 (171-257)||(18529196-18529282)
chr7 (162-259)||(16082473-16082570)
chr7 (206-279)||(32204197-32204270)
chr7 (155-244)||(35404310-35404399)
chr7 (166-263)||(48879645-48879742)
chr7 (159-219)||(29959035-29959095)
chr7 (164-237)||(16957639-16957711)
chr7 (167-263)||(16931867-16931962)
chr7 (167-263)||(16937250-16937345)
chr7 (167-263)||(30388697-30388793)
chr7 (206-278)||(40774264-40774336)
chr7 (216-263)||(4686080-4686127)
chr7 (171-258)||(35239829-35239915)
chr7 (194-264)||(6548533-6548603)
chr7 (163-257)||(10575802-10575896)
chr7 (229-279)||(31360313-31360363)
chr7 (171-244)||(44260558-44260631)
chr7 (171-302)||(1907586-1907717)
chr7 (216-279)||(3720135-3720198)
chr7 (206-257)||(5543061-5543112)
chr7 (216-259)||(35003630-35003673)
chr7 (206-249)||(43189688-43189731)
chr7 (215-278)||(44391019-44391082)
chr7 (206-251)||(18800197-18800242)
chr7 (221-258)||(46423388-46423425)
chr7 (206-258)||(5977757-5977809)
[»] chr5 (48 HSPs)
chr5 (156-318)||(35653236-35653399)
chr5 (156-294)||(34546743-34546882)
chr5 (159-323)||(4421940-4422105)
chr5 (156-321)||(16315512-16315676)
chr5 (167-321)||(35945222-35945377)
chr5 (161-309)||(4962507-4962655)
chr5 (182-321)||(43414042-43414182)
chr5 (165-307)||(25017283-25017426)
chr5 (170-295)||(5151468-5151594)
chr5 (170-322)||(28143100-28143253)
chr5 (163-278)||(13951258-13951373)
chr5 (156-322)||(39567868-39568035)
chr5 (156-277)||(12914140-12914261)
chr5 (164-329)||(8410115-8410281)
chr5 (167-302)||(3639072-3639207)
chr5 (164-287)||(25568304-25568428)
chr5 (196-321)||(37243852-37243977)
chr5 (162-295)||(27823233-27823364)
chr5 (165-268)||(39692984-39693087)
chr5 (183-309)||(338754-338881)
chr5 (195-295)||(1759821-1759922)
chr5 (166-279)||(12068195-12068307)
chr5 (204-295)||(1479140-1479232)
chr5 (134-279)||(39167538-39167683)
chr5 (230-318)||(15915871-15915960)
chr5 (169-232)||(4838259-4838322)
chr5 (171-278)||(20184570-20184677)
chr5 (211-309)||(40099352-40099450)
chr5 (172-258)||(39335454-39335540)
chr5 (192-322)||(10017599-10017727)
chr5 (175-277)||(10406772-10406873)
chr5 (171-263)||(678430-678522)
chr5 (171-279)||(19894798-19894906)
chr5 (206-279)||(38610313-38610386)
chr5 (167-238)||(15915014-15915083)
chr5 (165-239)||(39042096-39042170)
chr5 (195-279)||(6823773-6823858)
chr5 (216-259)||(12349585-12349628)
chr5 (206-257)||(24288502-24288553)
chr5 (206-257)||(24373668-24373719)
chr5 (216-263)||(28599691-28599738)
chr5 (206-244)||(3015106-3015144)
chr5 (206-279)||(3241974-3242047)
chr5 (192-237)||(16899635-16899680)
chr5 (211-263)||(27535114-27535167)
chr5 (218-258)||(5058772-5058812)
chr5 (206-278)||(17168691-17168763)
chr5 (207-263)||(28996229-28996285)
[»] chr2 (45 HSPs)
chr2 (162-297)||(2966511-2966647)
chr2 (162-321)||(6999173-6999333)
chr2 (133-318)||(39085773-39085952)
chr2 (162-308)||(16361537-16361684)
chr2 (163-321)||(39401513-39401671)
chr2 (192-321)||(765128-765258)
chr2 (161-308)||(862559-862707)
chr2 (158-321)||(27495090-27495254)
chr2 (131-296)||(17118376-17118542)
chr2 (161-321)||(17074466-17074626)
chr2 (161-294)||(41436448-41436582)
chr2 (161-321)||(17056036-17056196)
chr2 (161-321)||(17068483-17068643)
chr2 (164-263)||(23685689-23685788)
chr2 (166-308)||(33726355-33726498)
chr2 (191-312)||(17603811-17603933)
chr2 (185-309)||(33864349-33864474)
chr2 (162-258)||(17095108-17095204)
chr2 (156-321)||(1321132-1321299)
chr2 (156-310)||(9201484-9201638)
chr2 (165-240)||(11445379-11445454)
chr2 (166-321)||(44299659-44299815)
chr2 (168-295)||(35445294-35445423)
chr2 (166-279)||(464770-464884)
chr2 (170-279)||(44173099-44173207)
chr2 (169-249)||(15004905-15004985)
chr2 (171-297)||(2239562-2239689)
chr2 (191-323)||(13997880-13998013)
chr2 (171-279)||(34334182-34334290)
chr2 (162-263)||(11659233-11659334)
chr2 (206-306)||(34220639-34220740)
chr2 (206-263)||(747528-747585)
chr2 (162-239)||(33848957-33849034)
chr2 (156-229)||(41890182-41890255)
chr2 (156-279)||(2136401-2136524)
chr2 (171-261)||(29260167-29260257)
chr2 (206-255)||(3454743-3454791)
chr2 (206-279)||(10900271-10900344)
chr2 (204-308)||(43140314-43140419)
chr2 (227-278)||(11445313-11445364)
chr2 (216-259)||(34512671-34512714)
chr2 (215-249)||(8327004-8327038)
chr2 (209-279)||(30831636-30831706)
chr2 (183-249)||(2805373-2805441)
chr2 (224-277)||(37230253-37230306)
[»] chr8 (35 HSPs)
chr8 (169-321)||(19389288-19389441)
chr8 (164-321)||(4989909-4990064)
chr8 (165-294)||(10694781-10694911)
chr8 (181-290)||(18068952-18069062)
chr8 (164-295)||(8018733-8018866)
chr8 (156-294)||(26672755-26672894)
chr8 (172-321)||(21016035-21016185)
chr8 (170-323)||(45337983-45338137)
chr8 (171-289)||(14855394-14855513)
chr8 (183-289)||(26195383-26195490)
chr8 (191-295)||(25249345-25249450)
chr8 (156-279)||(6433509-6433632)
chr8 (185-279)||(6939152-6939246)
chr8 (191-318)||(21016234-21016362)
chr8 (164-294)||(37433239-37433369)
chr8 (135-249)||(33741525-33741637)
chr8 (166-295)||(44874308-44874430)
chr8 (173-268)||(34713953-34714048)
chr8 (211-321)||(5129434-5129545)
chr8 (200-279)||(26892795-26892874)
chr8 (171-293)||(3174436-3174563)
chr8 (171-295)||(7532767-7532890)
chr8 (171-256)||(20212433-20212518)
chr8 (183-265)||(30351583-30351666)
chr8 (162-263)||(39972189-39972290)
chr8 (171-258)||(4308789-4308876)
chr8 (171-230)||(7444258-7444317)
chr8 (156-279)||(38869969-38870092)
chr8 (195-258)||(6396315-6396378)
chr8 (215-278)||(20169309-20169372)
chr8 (171-249)||(35973927-35974005)
chr8 (209-254)||(17320000-17320045)
chr8 (216-249)||(39491858-39491891)
chr8 (171-231)||(5300203-5300263)
chr8 (171-259)||(25381708-25381796)
[»] scaffold0062 (3 HSPs)
scaffold0062 (163-321)||(16750-16908)
scaffold0062 (163-321)||(26918-27076)
scaffold0062 (163-321)||(37084-37242)
[»] chr6 (24 HSPs)
chr6 (165-322)||(7274191-7274349)
chr6 (130-320)||(10855379-10855562)
chr6 (163-279)||(7875202-7875318)
chr6 (164-295)||(12191466-12191598)
chr6 (162-308)||(5578245-5578392)
chr6 (156-321)||(26572060-26572221)
chr6 (163-279)||(7880448-7880564)
chr6 (156-322)||(16437567-16437726)
chr6 (191-295)||(6866915-6867020)
chr6 (156-279)||(8324125-8324248)
chr6 (172-258)||(31220369-31220455)
chr6 (163-232)||(32786041-32786110)
chr6 (214-321)||(29692319-29692427)
chr6 (172-258)||(21186059-21186145)
chr6 (166-279)||(12175535-12175647)
chr6 (234-321)||(32786259-32786346)
chr6 (166-255)||(34780023-34780112)
chr6 (194-295)||(28014638-28014740)
chr6 (210-262)||(1947424-1947476)
chr6 (156-279)||(12226352-12226475)
chr6 (128-189)||(19645941-19645995)
chr6 (164-239)||(29964274-29964349)
chr6 (206-263)||(5029489-5029546)
chr6 (206-279)||(27127528-27127601)
[»] scaffold0002 (1 HSPs)
scaffold0002 (171-268)||(392164-392261)
[»] scaffold0809 (2 HSPs)
scaffold0809 (182-241)||(4705-4764)
scaffold0809 (233-320)||(4249-4337)
[»] scaffold0144 (1 HSPs)
scaffold0144 (155-279)||(39553-39675)
[»] scaffold0050 (1 HSPs)
scaffold0050 (171-249)||(37430-37507)
[»] scaffold2122 (1 HSPs)
scaffold2122 (207-263)||(655-711)


Alignment Details
Target: chr4 (Bit Score: 303; Significance: 1e-170; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 13 - 413
Target Start/End: Complemental strand, 50514893 - 50514501
Alignment:
Q  13 aatatattgcgtttttgttgtcctattaacggtaggcaattttccaatatcctctaacgataaatcccaaacaatgggtggcacatggagtacaaattag 112  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  50514893 aatatattgcgtttttgttgtcctattaacggtgggtaattttccaatatcctctaacgataaatcccaaacaatgggtggtacatggagtacaaaatag 50514794  T
Q  113 tctacgatatttatcttttgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaaca 212  Q
    |||||||||||||||||||||||||||||||||||||       ||| || | |||||||||||||||||||||||| |||||||||||| |||||||||    
T  50514793 tctacgatatttatcttttgggtcttgctaaccattg-------ccccgatgtcaatggttaaggaaaccaaaagtagcatgtttgcattggtttcaaca 50514701  T
Q  213 acattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagggcaatgatt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||| |||||| ||    
T  50514700 acattttaacttttaaaaagttaaatttatcactttttaccatttttcaatgttatatttctattttatcctcttatccaatgtcacaagagcaatggtt 50514601  T
Q  313 ggcattctctatcttttaagtagaacaaatgaactagatgagtaaccaattacatttatcacatgaatacaattatatattaagagaaataacattctta 412  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50514600 agcattctctat-ttttaagtagaacaaatgaactagatgagtaaccaattacatttatcacatgaatacaattatatattaagagaaataacattctta 50514502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 131 - 321
Target Start/End: Complemental strand, 35808565 - 35808374
Alignment:
Q  131 tgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaa 230  Q
    ||||||||||||||||||| | ||||   | ||| |||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  35808565 tgggtcttgctaaccattgccatcaggagtcaggacaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaa 35808466  T
Q  231 agttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||||||||||| |||| || ||||||||||||||| |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  35808465 agttaaatttatcatttttcacaattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 35808374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 156 - 321
Target Start/End: Original strand, 55669704 - 55669870
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||  ||| ||||||||||| |||||||||||||||||||||||| |||| |||||    
T  55669704 gccctgagggcaatggttaaggaagccaaaagtagcatgtttgcattgtttttaacaacattttgacttttaaaaagttaaatttatcatttttcaccat 55669803  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||||||||||| |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  55669804 tttccaatgctatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 55669870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 162 - 294
Target Start/End: Original strand, 45688714 - 45688847
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||    
T  45688714 agggcaatagttaaggaagccaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcatttttca 45688813  T
Q  262 atgctatctttcta-ttttatccccttatccaat 294  Q
    ||||||| |||||| |||||||||||||||||||    
T  45688814 atgctatgtttctatttttatccccttatccaat 45688847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 132 - 294
Target Start/End: Original strand, 33951638 - 33951804
Alignment:
Q  132 gggtcttgctaaccattgtcctca---gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaa 228  Q
    |||| |||||||||||||||| ||   ||||| |||||||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||| ||||||    
T  33951638 gggttttgctaaccattgtccacaattgccctcagggcaatggttaaggaagccaaaattaacatgtttgtattggtttcaacaacattttaatttttaa 33951737  T
Q  229 aaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 294  Q
    ||||||||||||||||||||| || |||||||||| |||| |||||| |||||||||||||| ||||    
T  33951738 aaagttaaatttatcacttttcacaattttccaatactatatttctatttttatccccttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 132 - 321
Target Start/End: Complemental strand, 26040521 - 26040338
Alignment:
Q  132 gggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaa 231  Q
    |||||||||||||||||||||||||        ||| ||||||||||| ||||||||| ||| |||||||| | |||||||| ||||| |||||||||||    
T  26040521 gggtcttgctaaccattgtcctcaga-------gcagtggttaaggaagccaaaagtagcatatttgcattggcttcaacaatattttgacttttaaaaa 26040429  T
Q  232 gttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||| ||||||||||| ||||||||||||| |||| |||||| |||||||||||||||||||| | ||||| ||||| || ||||||||    
T  26040428 gttaaacttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaaggacaatggttagcattctc 26040338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 156 - 321
Target Start/End: Original strand, 23765543 - 23765709
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| ||| |||| ||||||||| | ||||||| |||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  23765543 gccctcaggacaattgttaaggaagctaaaagtagcatgtttgcattggtttcaacaacattttgatttttaaaaagttaaatttatcacttttcaccat 23765642  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||||||||||| |||| | ||||||||||||||| ||||   ||| ||||||| || ||||||||    
T  23765643 tttccaatgctatatttcaatttttatccccttatctaatgcaccaaaggcaatggttagcattctc 23765709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 192 - 321
Target Start/End: Original strand, 34016626 - 34016756
Alignment:
Q  192 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatc 290  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  34016626 atgtttgcattgatttcaacaacattttgacttttaaaaagttaaattcatcacttttcaccattttccaatgctatatttctatttttatccccttatc 34016725  T
Q  291 caatgtcacaagggcaatgattggcattctc 321  Q
    ||||||| ||||| ||||| || ||||||||    
T  34016726 caatgtctcaaggacaatggttagcattctc 34016756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 156 - 321
Target Start/End: Complemental strand, 41956357 - 41956191
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| || |||||||||||||||  |||||||| |||||||||||| | |||||||||||||| |||||||||||||||||||||||| |||| | |||    
T  41956357 gccctcagagcaatggttaaggaaggcaaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcat 41956258  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||||||| ||| |||||| |||||||| ||||||| ||| | ||||||||||| || ||||||||    
T  41956257 tttccaatgttatatttctatttttatcctcttatccgatgccccaagggcaatggttagcattctc 41956191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 10100247 - 10100104
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| |||      
T  10100247 caatggttaagaaagccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttctaatat 10100148  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaat 308  Q
    ||| ||| || |||||||||||||||| ||||| ||||| ||||    
T  10100147 tatatttatatttttatccccttatccgatgtcccaaggacaat 10100104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 19329062 - 19328950
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||||||  |||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  19329062 caatggttaaggaaggcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacatttcaccattttccaatgc 19328963  T
Q  266 tatctttctattt 278  Q
    ||| |||||||||    
T  19328962 tatatttctattt 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 51266895 - 51267043
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    ||||||||| ||||||||  |||||||| |||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||    
T  51266895 agggcaatgattaaggaagtcaaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttca 51266994  T
Q  262 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 309  Q
    || |||| |||||| ||||||| |||||||||||||  |||| ||||||    
T  51266995 atactatatttctatttttatctccttatccaatgttccaagagcaatg 51267043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 162 - 321
Target Start/End: Original strand, 2362600 - 2362762
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaactttt--aaaaagttaaatttatcactttttaccattttc 259  Q
    ||||||||||||||||||  ||||||||  ||||||||||| |||| ||||||||||| ||||||  ||||| ||||||||||||||||| |||||||||    
T  2362600 agggcaatggttaaggaagtcaaaagtagtatgtttgcattggttttaacaacattttgacttttaaaaaaaattaaatttatcacttttcaccattttc 2362699  T
Q  260 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||| |||| ||| || |||||||||||||||| ||| | ||||||||||| || ||||||||    
T  2362700 caatactatatttttatttttatccccttatccgatgccccaagggcaatggttagcattctc 2362762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 167 - 321
Target Start/End: Original strand, 31754914 - 31755069
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    |||||||||||||  |||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| | |||||| |||| ||    
T  31754914 aatggttaaggaagtcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcatttttcaattct 31755013  T
Q  267 atctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    || ||| || |||||||||||||||||||  | ||| ||||||| || ||||||||    
T  31755014 atatttatatttttatccccttatccaataccccaatggcaatggttagcattctc 31755069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 32131134 - 32131261
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 281  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||||| |||| |||||| ||||||    
T  32131134 aaaagtaacatgtttgcattggtttcaacaacatcttgacttttaaaaagttaaatttatcacttatcaccattttccaatactatatttctatttttat 32131233  T
Q  282 ccccttatccaatgtcacaagggcaatg 309  Q
    | | |||||||||||  |||||||||||    
T  32131234 ctctttatccaatgttccaagggcaatg 32131261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 47188803 - 47188697
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |||||| | |||||||||||||||||||| |||||||||||    
T  47188803 agggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgactttttagaagttaaatttatcacttttcaccattttcca 47188704  T
Q  262 atgctat 268  Q
    || ||||    
T  47188703 atactat 47188697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 166 - 309
Target Start/End: Complemental strand, 34316857 - 34316712
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaa-tttatcactttttaccattttccaatg 264  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||| |||||||||||| || ||||| |||||    
T  34316857 caatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattttatcacttttcactatttttcaatg 34316758  T
Q  265 ctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 309  Q
     ||| ||| || ||||||| |||||||||||| | |||||||||||    
T  34316757 ttatatttatatttttatctccttatccaatgccccaagggcaatg 34316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 319
Target Start/End: Original strand, 30475390 - 30475554
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| || ||||| ||||||||| |||||||||| ||||||||||| |||||||||| ||||| || |||||||||||||||||||||||||| |||||    
T  30475390 gccctcagagcaatagttaaggaagccaaaagtaatatgtttgcattggtttcaacaatattttgacatttaaaaagttaaatttatcacttttcaccat 30475489  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattc 319  Q
    ||| |||| |||| ||| || ||||||| |||||||||||  |  |||||||||| || ||||||    
T  30475490 ttttcaatactatatttttatttttatctccttatccaataccctaagggcaatggttagcattc 30475554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 289
Target Start/End: Original strand, 20811239 - 20811362
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    ||||||||| ||| ||||||||| ||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| |    
T  20811239 aatggttaaagaagccaaaagtagcatgtttgcattgattttaacaacattttgacttttaaaaagttaaatttatcacttttcaccaatttccaatgtt 20811338  T
Q  267 atctttcta-ttttatccccttat 289  Q
    || |||||| ||||||||||||||    
T  20811339 atatttctatttttatccccttat 20811362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 27839443 - 27839284
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||| |||||||   ||||| || |||||||||||| |||| || |||||||| ||||||||||| |||||||||||| |||| | |||||| |||    
T  27839443 gggcaatgattaaggaggtcaaaaatagcatgtttgcattggttttaataacattttgacttttaaaaacttaaatttatcatttttcatcatttttcaa 27839344  T
Q  263 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||| |||||| |||||| ||||||||||||| | ||||||||||| || ||||||||    
T  27839343 tgctatatttctatttttattcccttatccaatgccccaagggcaatggttagcattctc 27839284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 26831921 - 26831764
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||| ||||| |||  |||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  26831921 ggcaatcgttaaagaagtcaaaagtagcatgtttgcatt-gtttcaacaacattttaatttttaaaaagataaatttatcactttttaccattttacaat 26831823  T
Q  264 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
      ||| |||||| |||||||| ||||| ||||| | ||||| ||||  || ||||||||    
T  26831822 attatatttctatttttatcctcttattcaatgccccaaggacaattgttagcattctc 26831764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 31168107 - 31168265
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||||| ||| |||||||||  |||||| |||| |||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||    
T  31168107 ggcaatggttaaagaagccaaaagtagaatgtttacattggtttcaacaacattttgactttaaaaaaattaaatttatcacttttcaccattttccaat 31168206  T
Q  264 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||   ||||| |||||||||||| || ||||   ||||||||||  || ||||||||    
T  31168207 gctaaaattctatttttatccccttgtctaatgctccaagggcaatagttagcattctc 31168265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 53567087 - 53566971
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttat---cactttttaccattttccaa 262  Q
    |||| |||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    ||||||||| ||||| |||    
T  53567087 caatagttaaggaagtcaaaagtagcatgtttgcatgagtttcaacaacattttaacttttaaaaagttaaatttattagtactttttactatttttcaa 53566988  T
Q  263 tgctatctttctatttt 279  Q
    |||||| ||||||||||    
T  53566987 tgctatatttctatttt 53566971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 156 - 324
Target Start/End: Original strand, 54339078 - 54339246
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| || |||||||||||||||  |||||||| ||| ||| |||| ||||||| || ||||| ||||||||||| |||||||||||| |||| |||||    
T  54339078 gccctcagagcaatggttaaggaagtcaaaagtagcatatttacattggtttcaaaaatattttgacttttaaaaaattaaatttatca-ttttcaccat 54339176  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctctat 324  Q
    ||| ||||| ||| ||| || ||||||||| |||||||||| | ||| | ||||| || |||||||||||    
T  54339177 ttttcaatgttatatttatatttttatccctttatccaatgccccaacgacaatggttagcattctctat 54339246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 297
Target Start/End: Original strand, 40436056 - 40436188
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||||| ||||| |  ||||||||||||||||||| | |||| | ||||||  |||||    
T  40436056 caatggttaagaaaaccaaaagtagcatgtttgctttggtttcaacaatattttgatatttaaaaagttaaatttattatttttcatcattttttaatgc 40436155  T
Q  266 ta-tctttctattttatccccttatccaatgtc 297  Q
    || | ||||  ||||||||||||||||||||||    
T  40436156 tattttttcatttttatccccttatccaatgtc 40436188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 45088042 - 45088144
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||||||||||||||||||||||  |||||||||||  ||||||||   |||| ||||| ||||| ||||||||||||||||| | ||||||||||    
T  45088042 gggcaatggttaaggaaaccaaaagtagtatgtttgcattgatttcaaca---ttttgactttcaaaaaattaaatttatcacttttcatcattttccaa 45088138  T
Q  263 tgctat 268  Q
    ||||||    
T  45088139 tgctat 45088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 32584648 - 32584560
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    |||||||||||||||| |||||||||  ||| || |||||||| |||||||||||||||||||| |||| || ||||||||||||||||    
T  32584648 gttaaggaaaccaaaattaacatgttcccatgagattcaacaatattttaacttttaaaaagttgaattcattactttttaccattttc 32584560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 51290473 - 51290561
Alignment:
Q  234 taaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||| || ||||||||    
T  51290473 taaatttatcacttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaaggacaatggttagcattctc 51290561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 52341581 - 52341672
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||||||||||| ||  ||||||||||| | |||||||||||||| ||||||||||||||||||| |||| |||| | ||||||||||    
T  52341581 gttaaggaaaccaaaattagtatgtttgcattggattcaacaacattttgacttttaaaaagttaaattcatcatttttcatcattttccaa 52341672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 35675319 - 35675211
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    |||||| ||| ||||||||  |||||||||||   |||||||| ||||||||||||||||||||||||| ||||||||| || |||| ||||| | || |    
T  35675319 gttaagaaaatcaaaagtagtatgtttgcattgaattcaacaatattttaacttttaaaaagttaaattcatcacttttcactatttcccaatacaatat 35675220  T
Q  271 ttctatttt 279  Q
    |||||||||    
T  35675219 ttctatttt 35675211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 9693606 - 9693528
Alignment:
Q  165 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatc 243  Q
    |||||||||||||||  ||||| || |||||||||||| |||||||||| ||||  |||||||||||||||||||||||    
T  9693606 gcaatggttaaggaagtcaaaaatagcatgtttgcattggtttcaacaatatttcgacttttaaaaagttaaatttatc 9693528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 19876257 - 19876187
Alignment:
Q  226 taaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 295  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||||| ||||||||||||||||||||    
T  19876257 taaaaagttaaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatg 19876187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 15986237 - 15986338
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||||||||| |||||||  |||||||||||   |||||||| ||| | ||||||||||| ||||||| | ||||||| |||||||| ||    
T  15986237 agggcaatggttaaggaaactaaaagtagaatgtttgcattgaattcaacaatattctgacttttaaaaatttaaattcaccacttttcaccatttttca 15986336  T
Q  262 at 263  Q
    ||    
T  15986337 at 15986338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 20456540 - 20456641
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    ||||||||| ||||||||| |||||||| ||||||||||||   |||||||| |||||||| |||||||| ||||||| || |||||| | |||||| ||    
T  20456540 agggcaatgattaaggaaatcaaaagtagcatgtttgcattgaattcaacaatattttaacatttaaaaatttaaattcataacttttcatcatttttca 20456639  T
Q  262 at 263  Q
    ||    
T  20456640 at 20456641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 30617930 - 30618054
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 271  Q
    ||||||||||||||||||  | | ||||||| | |||||||| |||| |||||||||||||||||||| ||  ||||| | ||||| ||||||| || ||    
T  30617930 ttaaggaaaccaaaagtagtaggattgcattggattcaacaatatttgaacttttaaaaagttaaattcattgcttttcatcatttcccaatgcaatatt 30618029  T
Q  272 tctat-tttatccccttatccaatg 295  Q
    ||||| ||||||| |||| ||||||    
T  30618030 tctatgtttatcctcttaaccaatg 30618054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 1457663 - 1457584
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcacttttta 251  Q
    ||||||||| ||||||||| | |||||||||   |||||||| ||||||||||||||||| |||||||||||| ||||||    
T  1457663 ttaaggaaatcaaaagtaataagtttgcattgaattcaacaatattttaacttttaaaaaattaaatttatcaattttta 1457584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 3769831 - 3769897
Alignment:
Q  209 aacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta 275  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||||| |||||| || ||||||    
T  3769831 aacaatattttaacttttaaaaagtcaaatttatcacttttcaccatttttcaatgcaatatttcta 3769897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 35927379 - 35927309
Alignment:
Q  195 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||  |||| ||||||||| |||||    
T  35927379 tttgcattagattcaacaatattttaacttttaaaaagttaaattcatcgtttttcaccattttctaatgc 35927309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 279
Target Start/End: Complemental strand, 31494799 - 31494682
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    ||||||||||||||||||||||||||||| || ||| ||||   ||||||||  ||||  | ||||||||||||||||  |||||||| ||||||| | |    
T  31494799 agggcaatggttaaggaaaccaaaagtaatatatttacattgaattcaacaatgttttgtcatttaaaaagttaaattcttcacttttcaccatttccaa 31494700  T
Q  262 atgctatctttctatttt 279  Q
    || | || ||||||||||    
T  31494699 atacaatgtttctatttt 31494682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 279
Target Start/End: Complemental strand, 51018517 - 51018400
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||| ||||  |||||||  || ||| ||||   ||||||||  |||||| |||||||||||||||||  |||||||| |||||||| ||    
T  51018517 agggcaatggttaaagaaattaaaagtagtatatttacattgaattcaacaatgttttaatttttaaaaagttaaattcttcacttttcaccatttttca 51018418  T
Q  262 atgctatctttctatttt 279  Q
    |||| || ||||||||||    
T  51018417 atgcaatgtttctatttt 51018400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 35511264 - 35511201
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||| | || ||||||||||    
T  35511264 ttttaacttttaaaaagtcaaattcatcacttttcaccattttccaatacaatatttctatttt 35511201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 31487754 - 31487840
Alignment:
Q  224 tttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 309  Q
    |||||||||| ||||||||||||||| || ||||| ||||||||| ||| || |||||||||||||| |||||   |||||||||||    
T  31487754 tttaaaaagtcaaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaagggcaatg 31487840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 279
Target Start/End: Complemental strand, 30199914 - 30199807
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 271  Q
    ||||| |||| ||||||||   |||| |||| | ||||| || ||||||||||||||||| |||| || ||||||||||| |||||| |||||| || ||    
T  30199914 ttaagaaaactaaaagtaatgagtttacattggattcaataatattttaacttttaaaaaattaatttcatcactttttatcatttttcaatgcaatatt 30199815  T
Q  272 tctatttt 279  Q
    | ||||||    
T  30199814 tatatttt 30199807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 52021047 - 52021106
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||  |||| ||||||    
T  52021047 ttcaacaatattttaacatttaaaaagttaaatttatcattttttacagtttttcaatgc 52021106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 265
Target Start/End: Original strand, 966562 - 966656
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    |||||||||| ||||||||  |  ||| |||| | |||||||| ||||||| ||||||||||||||||| || | |||||| |||||| ||||||    
T  966562 gttaaggaaatcaaaagtagtagtttttcattggattcaacaatattttaatttttaaaaagttaaattcataattttttatcatttttcaatgc 966656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 13966574 - 13966648
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttta 280  Q
    |||||||| || | |||||||||||||| ||||| || | |||||||||||||||||||| || ||| |||||||    
T  13966574 ttcaacaatatgtcaacttttaaaaagtcaaattcattattttttaccattttccaatgcaatatttatatttta 13966648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 263
Target Start/End: Complemental strand, 36486856 - 36486723
Alignment:
Q  130 ttgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 229  Q
    |||| ||||||||||||||| ||| | | || |||  |||| ||||||||| |||| |||| || ||| |||    ||||| || ||||| |||||||||    
T  36486856 ttggatcttgctaaccattgccctgatctctcaggataatgattaaggaaatcaaacgtaatatatttacatagaattcaataatattttgacttttaaa 36486757  T
Q  230 aagttaaatttatcactttttaccattttccaat 263  Q
    || |||||||  |||||||| |||||||||||||    
T  36486756 aaattaaattcttcacttttcaccattttccaat 36486723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 39418212 - 39418155
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||  |||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  39418212 ttcaacaattttttaacttttaaaaagtcaaacatatcactttttaccattatccaat 39418155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 39158455 - 39158363
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||| ||||||||  |||||| ||||   || ||||| ||||||| ||||||||||||||||  ||||||||| ||| ||| |||||    
T  39158455 gttaaggaaatcaaaagtagtatgtttacattgaattgaacaatattttaatttttaaaaagttaaatagatcacttttcaccctttcccaat 39158363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 46823488 - 46823544
Alignment:
Q  207 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||  |||| ||||||||||||||||||| || |||||| |||||||||||||    
T  46823488 tcaacaattttttgacttttaaaaagttaaattcataacttttcaccattttccaat 46823544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 49483122 - 49483169
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||| ||||||| |||| |||||||||| |||||||||||||    
T  49483122 ttttaactttgaaaaagtcaaatctatcacttttcaccattttccaat 49483169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 11996182 - 11996140
Alignment:
Q  221 acttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||| |||||||||| |||||||||| |||||||||||||    
T  11996182 acttttagaaagttaaatctatcacttttcaccattttccaat 11996140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 279
Target Start/End: Complemental strand, 13498224 - 13498138
Alignment:
Q  193 tgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||| |||| | ||||||||  |||| ||||||||||||||||||| |||  | ||||| |||||||||| | || ||||||||||    
T  13498224 tgtttacattggattcaacaaagttttgacttttaaaaagttaaattcatcgttctttactattttccaatacaatatttctatttt 13498138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 27545877 - 27545950
Alignment:
Q  206 ttcaacaacattttaactttt-aaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    |||||||| ||||||| |||| ||||||||||||| ||||| ||||| |||||| |||||| || ||||||||||    
T  27545877 ttcaacaatattttaagttttcaaaaagttaaattcatcac-ttttatcatttttcaatgcaatatttctatttt 27545950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 23260728 - 23260793
Alignment:
Q  215 attttaacttttaaaaagttaaatttatca-ctttttaccattttccaatgctatctttctatttt 279  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||  |||||| || ||| ||||||    
T  23260728 attttaacttttaaaaagttaaattcatcagcttttcaccatttctcaatgcaatatttttatttt 23260793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 25928454 - 25928499
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 251  Q
    |||||||| |||||||| ||||||| |||||||| |||||||||||    
T  25928454 ttcaacaatattttaacatttaaaacgttaaattcatcacttttta 25928499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 53484634 - 53484687
Alignment:
Q  210 acaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||||||||||| ||||||||||| |||  ||||| ||||||| ||||    
T  53484634 acaacattttaacttttagaaagttaaattcatctttttttcccatttttcaat 53484687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 32415542 - 32415700
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| || ||||| ||||    
T  32415542 ggcaatggttaaggaaaccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatgacttttcacaatttttcaat 32415641  T
Q  264 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||| |||||| ||||||||| |||||||||| | ||||||||||||||  |||||||    
T  32415642 gctatatttctatttttatccctttatccaatgcctcaagggcaatgattaacattctc 32415700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 160 - 321
Target Start/End: Complemental strand, 36730293 - 36730131
Alignment:
Q  160 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||     
T  36730293 tgagggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttt 36730194  T
Q  260 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||| |||| ||| || |||||||||||||||||||| || |||||||||| || ||||||||    
T  36730193 caatactatatttatatttttatccccttatccaatgccataagggcaatggttagcattctc 36730131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 8847588 - 8847440
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||||||||||||||||||| ||||||| ||||  ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8847588 ggcaatggttaaggaaaccaaaagtagcatgtttacattgttttcaacaatattttaacttttaaaaagttaaattaatcactttttaccattttccaat 8847489  T
Q  264 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgat 311  Q
    | ||| |||||| |||||||||||||||||||||| |||| ||||||||    
T  8847488 gttatatttctatttttatccccttatccaatgtcccaagtgcaatgat 8847440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 166 - 328
Target Start/End: Original strand, 46317461 - 46317624
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||||||     
T  46317461 caatggttaaggaagccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgt 46317560  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctctatcttt 328  Q
    ||| |||||| |||||||  ||||||||||||| ||||||||||| || |||||| || |||||    
T  46317561 tatatttctatttttatctacttatccaatgtctcaagggcaatggttagcattccctttcttt 46317624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 167 - 321
Target Start/End: Complemental strand, 8715634 - 8715480
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    ||||||||||||| | ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  8715634 aatggttaaggaagctaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgct 8715535  T
Q  267 atctttctattttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    || ||||||||||  |||||||||||||| |  |||| ||||| || ||||||||    
T  8715534 atatttctatttttaccccttatccaatgccctaaggacaatggttagcattctc 8715480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 167 - 321
Target Start/End: Complemental strand, 9067521 - 9067367
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    ||||||||||||| | ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  9067521 aatggttaaggaagctaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgct 9067422  T
Q  267 atctttctattttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    || ||||||||||  |||||||||||||| |  |||| ||||| || ||||||||    
T  9067421 atatttctatttttaccccttatccaatgccctaaggacaatggttagcattctc 9067367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 35306303 - 35306451
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    ||||||||| |||||||||||||||||| ||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  35306303 agggcaatgcttaaggaaaccaaaagtagcatgtttgcattgatttcaataacattttaacttttaaaaagttaaatttatcacttttcatcattttcca 35306402  T
Q  262 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 309  Q
    ||| ||| |||||| |||||||||||||||||||  | |||||||||||    
T  35306403 atgttatatttctatttttatccccttatccaattgcccaagggcaatg 35306451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 44570523 - 44570364
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    ||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  44570523 gggcaatggttaaggaagccaaaagtagcatgtttgcattgatttcaacaacattttgacttttaaaaagttaaagttatcacttttcaccattttccaa 44570424  T
Q  263 tgctatctttctatttt-atccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    || ||| |||||||||| ||||| ||||| |||| | ||||||||||| || ||||||||    
T  44570423 tgttatatttctattttgatccctttatcgaatgccccaagggcaatggttagcattctc 44570364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 157 - 295
Target Start/End: Complemental strand, 51817455 - 51817316
Alignment:
Q  157 ccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 256  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  51817455 ccctgagggcaatggttaaggaagccaaaagtagcatgtttgtattagtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccatt 51817356  T
Q  257 ttccaatgctatctttcta-ttttatccccttatccaatg 295  Q
    |||||||||||| ||| || |||||||| ||||| |||||    
T  51817355 ttccaatgctatatttttatttttatcctcttattcaatg 51817316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 25102457 - 25102300
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||| ||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  25102457 ggcaatagttaaggaaaccaaaagtagcatatttgcattggtttcaacaatattttaactttaaaaaaatt-aatttatcactttttaccattttccaat 25102359  T
Q  264 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||| |||||| ||||||| | |||||||||||| ||||||||||| || ||||||||    
T  25102358 gctatatttctatttttatctcattatccaatgtcccaagggcaatggttagcattctc 25102300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 4759978 - 4759854
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 271  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||    
T  4759978 ttaaggaagccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatgctatatt 4759879  T
Q  272 tcta-ttttatccccttatccaatg 295  Q
    |||| ||||||||| ||||||||||    
T  4759878 tctatttttatccctttatccaatg 4759854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 166 - 312
Target Start/End: Original strand, 10854834 - 10854985
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  10854834 caatgattaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttattagttttcaccattttccaatgc 10854933  T
Q  266 tatctttctatttt-----atccccttatccaatgtcacaagggcaatgatt 312  Q
    ||| |||||| |||     |||||||||||||||| | ||||||||||||||    
T  10854934 tatatttctacttttatccatccccttatccaatgccccaagggcaatgatt 10854985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 166 - 330
Target Start/End: Original strand, 37509086 - 37509251
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||||||  |||||||||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||    
T  37509086 caatggttaaggaagtcaaaagtaacatatttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatgc 37509185  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctctatctttta 330  Q
    |   |||| | |||||||||||||||||||| | ||| ||||||| || |||||||| || |||||    
T  37509186 tgcatttcaatttttatccccttatccaatgccccaaaggcaatggttagcattctcaatttttta 37509251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 29915709 - 29915553
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||| |||||||| |||||||||  ||||||||||| |||||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||| |    
T  29915709 caatgattaaggaagccaaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatac 29915610  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||| ||| || |||||||||||||||||| | | ||||||||||| || ||||||||    
T  29915609 tatatttttatttttatccccttatccaacgccccaagggcaatggttagcattctc 29915553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 29964862 - 29964706
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||| |||||||| |||||||||  ||||||||||| |||||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||| |    
T  29964862 caatgattaaggaagccaaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatac 29964763  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||| ||| || |||||||||||||||||| | | ||||||||||| || ||||||||    
T  29964762 tatatttttatttttatccccttatccaacgccccaagggcaatggttagcattctc 29964706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 175 - 321
Target Start/End: Complemental strand, 44695796 - 44695649
Alignment:
Q  175 aggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttct 274  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||   ||| ||| |    
T  44695796 aggaagccaaaagtaacatgtttgcattgatttcaacaacattttaatttttaaaaagttaaatttatcatttttcaccattttccaagattatatttat 44695697  T
Q  275 a-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    | |||||||||||||||||||||| ||| | |||||||| ||||||||    
T  44695696 atttttatccccttatccaatgtcccaatgacaatgattagcattctc 44695649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 157 - 279
Target Start/End: Original strand, 12051004 - 12051126
Alignment:
Q  157 ccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 256  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||| |  |||    
T  12051004 ccctcagggcaatggttaaggaagccaaaagtagcatgtttgcattgttttcaacaacattttaatttttaaaaagttaaatttatcatttttcattatt 12051103  T
Q  257 ttccaatgctatctttctatttt 279  Q
    || |||| |||| ||||||||||    
T  12051104 ttacaatactatatttctatttt 12051126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 20227514 - 20227405
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||| ||||||||  ||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||||| | |||||| ||||||    
T  20227514 caatgattaaggaagtcaaaagtaacatgtttgtattggtttcaataacattttaacttttaagaagttaaatttatcacttttcatcatttttcaatgc 20227415  T
Q  266 tatctttcta 275  Q
    ||| ||||||    
T  20227414 tatatttcta 20227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 12905415 - 12905292
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    |||| |||||||| | ||||||| |||||||||||| |||||||||||||||| |||||||||| ||||||||||||| |||| |||||||| ||||| |    
T  12905415 aatgattaaggaagcaaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaatgttaaatttatcatttttcaccatttt-caatgtt 12905317  T
Q  267 atctttcta-ttttatccccttatc 290  Q
    || |||||| |||||||||||||||    
T  12905316 atatttctatttttatccccttatc 12905292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 52570755 - 52570870
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacat--gtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||||||  ||||||||| |||  ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  52570755 caatggttaaggatgccaaaagtagcatatgtttgcattggtttcaacaatattttgacttttaaaaagttatatttatcacttttcaccattttccaat 52570854  T
Q  264 gctatctttctatttt 279  Q
     |||| ||||||||||    
T  52570855 actatatttctatttt 52570870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 31647278 - 31647362
Alignment:
Q  165 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 249  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||| |||||||| |||||||||||||||||||||||| ||||    
T  31647278 gcaatggttaaggaagccaaaagtagcatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcattttt 31647362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 21324496 - 21324612
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    ||||| ||||| |||||||| ||| ||||||  | |||||||| |||||||||||||||||||||||| |||||||||| | || |||||||||| || |    
T  21324496 gttaaagaaactaaaagtaatatgattgcatcggattcaacaatattttaacttttaaaaagttaaatctatcacttttcatca-tttccaatgcaatat 21324594  T
Q  271 ttctattttatcccctta 288  Q
    ||||||||||||| ||||    
T  21324595 ttctattttatccgctta 21324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 222 - 321
Target Start/End: Original strand, 1803919 - 1804019
Alignment:
Q  222 cttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattct 320  Q
    |||||| |||||||||||||||| |||||||| |||| ||||  ||| |||||| |||||||||||||||||||| | ||||| |||||||| |||||||    
T  1803919 cttttacaaagttaaatttatcattttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaaggacaatgattagcattct 1804018  T
Q  321 c 321  Q
    |    
T  1804019 c 1804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 34060895 - 34060803
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||||  |||||||   ||||||||||   |||||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  34060895 gttaaggaaattaaaagtagtttgtttgcattgaattcaacaatattttaacttttaaaaagttaaattcatcacttttcaccatttttcaat 34060803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 18881 - 18791
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 295  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||| ||| ||| ||||||| || |||||| |||||||| |||| ||||||    
T  18881 ttcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatg 18791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 41345977 - 41346047
Alignment:
Q  193 tgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||||| |||||| || ||||| ||||    
T  41345977 tgtttgcattggtttcaacaatattttaacttttaaaaaattaaatttattacttttcactatttttcaat 41346047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 19022 - 18949
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||| ||| ||| ||||||| || ||||||||||    
T  19022 ttcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttt 18949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 45899672 - 45899547
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcacttttt-accattttccaatgctatct 270  Q
    ||||||||||||||||||  |||||| ||||   |||||||| ||||| ||||||||||| ||||||| |||||||||| | |||||||||||   || |    
T  45899672 ttaaggaaaccaaaagtagtatgtttacattgaattcaacaatattttgacttttaaaaatttaaattcatcactttttcatcattttccaatataatat 45899573  T
Q  271 ttcta-ttttatccccttatccaatg 295  Q
    ||||| |||||| | |||||||||||    
T  45899572 ttctatttttattctcttatccaatg 45899547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 11316970 - 11317037
Alignment:
Q  195 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||||| ||||| || ||||| ||||||||||||||||||| || |||||| ||||||||||||    
T  11316970 tttgcattagattcaataatattttgacttttaaaaagttaaattcataacttttcaccattttccaa 11317037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 26850579 - 26850535
Alignment:
Q  215 attttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  26850579 attttaacttttaaaaaattaaattcatcactttttaccattttc 26850535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 34750351 - 34750293
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 264  Q
    |||||||| ||||||| || |||||||||||||| ||||||||| |||| |||||||||    
T  34750351 ttcaacaatattttaatttataaaaagttaaattcatcacttttcaccagtttccaatg 34750293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 48136790 - 48136701
Alignment:
Q  232 gttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||||||||||||||  || ||||||||||||||| |||||| |||||| ||||||||||||  | ||||| ||||| || ||||||||    
T  48136790 gttaaatttatcactttc-acaattttccaatgctatatttctatttttattcccttatccaataccccaaggacaatggttagcattctc 48136701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 11675293 - 11675399
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    ||||||||||||||||||   | ||| ||||| | |||||||| ||||| || ||||||||||||||||  |||  |||||||||||| |||| | || |    
T  11675293 gttaaggaaaccaaaagtggtaggttagcattggattcaacaatattttgacatttaaaaagttaaattcgtca--ttttaccatttttcaatacaatat 11675390  T
Q  271 ttctatttt 279  Q
    |||||||||    
T  11675391 ttctatttt 11675399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 39974900 - 39974827
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    |||||||  ||||||||||||||||||||||||| ||||||| | | ||||||| ||||| || ||| ||||||    
T  39974900 ttcaacactattttaacttttaaaaagttaaattcatcacttctcatcattttctaatgcaatatttttatttt 39974827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 50420699 - 50420744
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 251  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||    
T  50420699 ttcaacaattttttaacttttaaaaagttaaatctatcacttttta 50420744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 46160500 - 46160575
Alignment:
Q  179 aaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttacca 254  Q
    |||||||||||  ||||| ||||||| ||||||||  ||||||| ||| |||||||| ||| ||||||||| ||||    
T  46160500 aaccaaaagtagtatgttcgcattagattcaacaattttttaaccttttaaaagttacattcatcacttttcacca 46160575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 49976232 - 49976185
Alignment:
Q  209 aacaacattttaacttttaaaaagttaaatttatcactttttaccatt 256  Q
    ||||| ||||| ||||||||||||||||||| ||||||||| ||||||    
T  49976232 aacaatattttgacttttaaaaagttaaattcatcacttttcaccatt 49976185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 271288 - 271202
Alignment:
Q  178 aaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 264  Q
    ||||||||||||  | ||||| ||| | ||||||||  |||||||||||||||||| ||||| || | |||||| | ||||||||||    
T  271288 aaaccaaaagtagaaagtttgtattggattcaacaatgttttaacttttaaaaagtcaaattcattattttttatcgttttccaatg 271202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 6822879 - 6822837
Alignment:
Q  220 aacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    ||||||||||||||| |||| |||||||||||||| |||||||    
T  6822879 aacttttaaaaagttgaattcatcactttttaccactttccaa 6822837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 12060153 - 12060096
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||  |||||||||||||||| | |||| |||||||||| | |||||||||||    
T  12060153 ttcaacaattttttaacttttaaaaactcaaatctatcacttttcatcattttccaat 12060096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 156 - 321
Target Start/End: Complemental strand, 27209862 - 27209696
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  27209862 gccctgagggcaatggttaaggaagccaaaagtaggatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcaattttcaccat 27209763  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||||||| ||| |||||| ||||||||| |||||||||| | ||||| ||||| || ||||||||    
T  27209762 tttccaatgttatatttctatttttatccctttatccaatgccccaaggacaatggttagcattctc 27209696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 321
Target Start/End: Original strand, 34874545 - 34874698
Alignment:
Q  169 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 268  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  34874545 tggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgctat 34874644  T
Q  269 ctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
     |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  34874645 atttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 34874698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 309
Target Start/End: Original strand, 11385953 - 11386100
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  11385953 gggcaatggttaagaaaaccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcaatttttaccattttccaa 11386052  T
Q  263 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 309  Q
    |||||| |||||| ||||||||  ||||| |||||| ||||| |||||    
T  11386053 tgctatatttctatttttatccaattatctaatgtcccaaggacaatg 11386100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 41147612 - 41147453
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||||||||||||  |||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||| |||    
T  41147612 gggcaatggttaaggaagtcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattaatcattttttaccatttttcaa 41147513  T
Q  263 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||| |||||| |||||||||||||||||||| | ||||| ||||| || ||||||||    
T  41147512 tgctatatttctatttttatccccttatccaatgccccaaggacaatggttagcattctc 41147453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 162 - 295
Target Start/End: Complemental strand, 4940875 - 4940741
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||| |||||||||||||||| || |||||||| ||| |||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  4940875 agggcaatagttaaggaaaccaaaaatagcatgtttgtattggttttaacaatattttgacttttaaaaagttaaatttatcacttttaaccattttcca 4940776  T
Q  262 atgctatctttcta-ttttatccccttatccaatg 295  Q
    ||||||| |||||| ||||||||||||||||||||    
T  4940775 atgctatatttctatttttatccccttatccaatg 4940741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 321
Target Start/End: Complemental strand, 7190616 - 7190450
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| ||| |||||||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||    
T  7190616 gcccttaggacaatggttaaggaagctaaaagtagcatgtttgcattagtttcaacaccattttaacttttaaaaagttaaatttatcacttttcatcat 7190517  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||  |||||||| |||||| |||||||| |||| |||||| | ||||||||| | || ||||||||    
T  7190516 ttttgaatgctatatttctatttttatcctcttaaccaatgccccaagggcaaaggttagcattctc 7190450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 160 - 321
Target Start/End: Complemental strand, 22346374 - 22346212
Alignment:
Q  160 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    ||||| |||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||     
T  22346374 tgaggacaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaaattaaatttatcacttttcaccattttt 22346275  T
Q  260 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||| |||| |||||| |||||| ||||||||||| | | ||||||||||| || ||||||||    
T  22346274 caatactatatttctatttttattcccttatccaaagccccaagggcaatggttagcattctc 22346212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 166 - 309
Target Start/End: Complemental strand, 49508864 - 49508721
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    |||||||||| ||| ||||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  49508864 caatggttaaagaagccaaaagtagcatgtttgcattggtttcgacaatattttgacttttaaaaagttaaatttatcac-tttcaccattttccaatgc 49508766  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaatg 309  Q
    ||| |||||| |||||||||||||||||||| | |||||||||||    
T  49508765 tatatttctatttttatccccttatccaatgccccaagggcaatg 49508721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 28277610 - 28277484
Alignment:
Q  169 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 268  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |||    
T  28277610 tggttaaggaaatcaaaagtaacatgtttgcattgttttcaacaacattttaatttttaaaaagttaaatttatcactttttatcatttttcaatgttat 28277511  T
Q  269 ctttcta-ttttatccccttatccaat 294  Q
     |||||| |||||||| ||||||||||    
T  28277510 atttctatttttatcctcttatccaat 28277484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 160 - 321
Target Start/End: Original strand, 43433744 - 43433906
Alignment:
Q  160 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    |||||| ||||||||||||| |||||||||  ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||     
T  43433744 tgagggtaatggttaaggaagccaaaagtagtatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttt 43433843  T
Q  260 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
     ||| |||| |||||| |||||||||||||||||||| | |||| |||||  || ||||||||    
T  43433844 taatactatatttctatttttatccccttatccaatgccccaagagcaatagttagcattctc 43433906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 173 - 321
Target Start/End: Complemental strand, 47655495 - 47655346
Alignment:
Q  173 taaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatcttt 272  Q
    |||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||  ||    
T  47655495 taaggaaggcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcaattttcaccatttttcaatgctatactt 47655396  T
Q  273 cta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||| |||||||||||||| |||||||  |||||||||| || ||||||||    
T  47655395 ctatttttatccccttattcaatgtcttaagggcaatggttagcattctc 47655346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 279
Target Start/End: Original strand, 50154444 - 50154561
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| ||    
T  50154444 agggtaatggttaaggaagccaaaagtaacatgtttgcattggtttcaacaacattttaacttttaaaaggttaaatttatcattttttatcatttttca 50154543  T
Q  262 atgctatctttctatttt 279  Q
    ||||||| ||| ||||||    
T  50154544 atgctatatttatatttt 50154561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 49901906 - 49902030
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||| |    
T  49901906 gttaaggaagccaaaagtatcatgtttgcattggtttcaacaacgttttaacgtttaaaaagttaaatttatcacttttcaccattttccaatactatat 49902005  T
Q  271 ttcta-ttttatccccttatccaat 294  Q
    ||||| |||||||| ||||||||||    
T  49902006 ttctatttttatcctcttatccaat 49902030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 279
Target Start/End: Complemental strand, 6170684 - 6170569
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||  | ||||||||||    
T  6170684 ggcaatggttaaggaagtcaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttctctattttccaat 6170585  T
Q  264 gctatctttctatttt 279  Q
    ||||| ||||||||||    
T  6170584 gctatatttctatttt 6170569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 167 - 312
Target Start/End: Complemental strand, 932287 - 932141
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    |||||||||||||   ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||| | ||||||||||||||    
T  932287 aatggttaaggaaggtaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaaattaaatttataatttttcatcattttccaatgct 932188  T
Q  267 atctttcta-ttttatccccttatccaatgtcacaagggcaatgatt 312  Q
    || |||||| |||||||||||||||||||| | ||||  ||||||||    
T  932187 atatttctatttttatccccttatccaatgccccaagaacaatgatt 932141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 2125838 - 2125682
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    |||||||||| |||  ||||||||||||| ||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||    
T  2125838 caatggttaaagaagtcaaaagtaacatggttgtatttgtttcatcaacattttgacttttaaaaagttaaatttatcacttttcacaatttttcaatgc 2125739  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||| |||||| |||||||||||||||||||| | ||||  ||||| || ||||||||    
T  2125738 tatatttctatttttatccccttatccaatgccccaagaacaatggttagcattctc 2125682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 321
Target Start/End: Original strand, 24140744 - 24140903
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||| ||| |||||||||||    
T  24140744 agggcaatggttaaggaagccaaaaatagcatgtttgcattggtttcaacaacattttgactttaaaaaagttaagtttatcacgtttcaccattttcca 24140843  T
Q  262 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||  ||| |||||| |||||||||||||| ||||| | ||| ||||||| || ||||||||    
T  24140844 atagtatatttctatttttatccccttat-caatgccccaaaggcaatggttagcattctc 24140903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 33929947 - 33930070
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 271  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| || ||||| ||||||||| ||    
T  33929947 ttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcagttttcactatttttcaatgctatatt 33930046  T
Q  272 tcta-ttttatccccttatccaat 294  Q
    | || |||||||||||||||||||    
T  33930047 tatatttttatccccttatccaat 33930070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 11385946 - 11385797
Alignment:
Q  161 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 260  Q
    ||||||||||||||||||  ||| ||||| |||   | |||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  11385946 gagggcaatggttaaggatgccataagtagcattcctacattggtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttcc 11385847  T
Q  261 aatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 309  Q
    ||| |||| |||||| ||||||||||||||||||||   |||||||||||    
T  11385846 aatactatatttctatttttatccccttatccaatgctgcaagggcaatg 11385797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 42607438 - 42607326
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 281  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||| ||| || ||||||    
T  42607438 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccatttttcaatgctatatttttatttttat 42607339  T
Q  282 ccccttatccaat 294  Q
    |||||||||||||    
T  42607338 ccccttatccaat 42607326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 47895308 - 47895411
Alignment:
Q  165 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 264  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||| ||||     
T  47895308 gcaatggttaaggaagccaaaagtaacatgtttgcattagtttcaacaatattttgacatttaaaaagttaaatttatcacctttcaccatttttcaata 47895407  T
Q  265 ctat 268  Q
    ||||    
T  47895408 ctat 47895411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 31975460 - 31975618
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||||||| || | |||| |||||||||||||||||||| ||||| ||||| | ||||||||||||||||||| ||||||||| |||||| ||||    
T  31975460 ggcaatggttaagaaagctaaaaataacatgtttgcattagttttaacaatattttgatttttaaaaagttaaatttaccactttttatcatttttcaat 31975559  T
Q  264 gctatctttctattt-tatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    | ||| ||||||||| |||| | |||||||||  | ||||||||||| || ||||||||    
T  31975560 gttatatttctatttatatctctttatccaatacctcaagggcaatggttagcattctc 31975618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 52396414 - 52396547
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||||||||  |||| || |||||||||||| ||||||| || ||||| ||||||||||||||||||||||||| ||||| |||||| ||    
T  52396414 agggcaatggttaaggaaattaaaaatagcatgtttgcatttgtttcaataatattttgacttttaaaaagttaaatttatcac-ttttatcatttttca 52396512  T
Q  262 atgctatctttcta-ttttatccccttatccaatg 295  Q
    || |||| |||||| ||||||||||||||||||||    
T  52396513 atactatatttctatttttatccccttatccaatg 52396547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 4656020 - 4656149
Alignment:
Q  195 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaa 293  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||| || ||||||  ||||||||||    
T  4656020 tttgcattagtttcaacaacattttaatttttaaaaagttaaatttatcactttttactattttccaatgttatatttttatttttatttccttatccaa 4656119  T
Q  294 tgtcacaagggcaatgattggcattctcta 323  Q
    |||  | | ||||||||||  |||||||||    
T  4656120 tgttccgaaggcaatgattaacattctcta 4656149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 318
Target Start/End: Original strand, 40845253 - 40845379
Alignment:
Q  193 tgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatcc 291  Q
    ||||||| || |||||||||| ||||| | ||||||||||||||||||||||||||| |||||||| |||| |||| |||||| |||||||||||||| |    
T  40845253 tgtttgctttggtttcaacaatattttgatttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccccttattc 40845352  T
Q  292 aatgtcacaagggcaatgattggcatt 318  Q
    |||||| ||||||||||| || |||||    
T  40845353 aatgtctcaagggcaatggttagcatt 40845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 321
Target Start/End: Complemental strand, 28851024 - 28850885
Alignment:
Q  182 caaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttta 280  Q
    |||||||| ||| |||||||| ||||||||||  |||| ||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||    
T  28851024 caaaagtagcatatttgcattggtttcaacaat-ttttgacttttaaaaagttaaatttatcacttttcaccattttccaatgttatatttctattttta 28850926  T
Q  281 tccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    | | |||||| |||| | ||||||||||| || ||||||||    
T  28850925 ttctcttatctaatgccccaagggcaatggttagcattctc 28850885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 32213988 - 32213876
Alignment:
Q  198 gcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgt 296  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| | | |||||| ||||||||||||||| |||||    
T  32213988 gcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgttctatttctatttttatccccttatctaatgt 32213889  T
Q  297 cacaagggcaatg 309  Q
    | |||| ||||||    
T  32213888 cccaagagcaatg 32213876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 45721728 - 45721857
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||||||||||| |||||||| ||||||||||||  |||    |||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  45721728 ggcaatggttaaggaaatcaaaagtagcatgtttgcattgattt---taacattttgatttttaaaaagttaaatttatcagtttttaccattttccaat 45721824  T
Q  264 gctatctttcta-ttttatccccttatccaatg 295  Q
    | ||| ||| || ||||||| ||||||||||||    
T  45721825 gttatatttttatttttatcaccttatccaatg 45721857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 29966800 - 29966928
Alignment:
Q  169 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttt-taaaaagttaaatttatcactttttaccattttccaatgcta 267  Q
    |||||||||||  |||||||| |||||||||||| |||||||||| ||||| |||||  ||||| |||||||||||| ||||| ||||||| ||||||||    
T  29966800 tggttaaggaagtcaaaagtagcatgtttgcattggtttcaacaatattttgactttaaaaaaaattaaatttatcattttttgccatttttcaatgcta 29966899  T
Q  268 tctttcta-ttttatccccttatccaatg 295  Q
    | ||| || ||||||||||||||||||||    
T  29966900 tatttatatttttatccccttatccaatg 29966928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 50295549 - 50295434
Alignment:
Q  182 caaaagtaacatgttt-gcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttt 279  Q
    |||||||| ||||||| |||||  ||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||| |||| |||||| ||||    
T  50295549 caaaagtagcatgttttgcattgatttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatactatatttctattttt 50295450  T
Q  280 atccccttatccaatg 295  Q
    | ||||||||||||||    
T  50295449 acccccttatccaatg 50295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 8244068 - 8244207
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||| |||||      ||| ||||||||||||||||||    ||| |||||||||    
T  8244068 agggcaatggttaaggaagccaaaaataacatgtttccattggtttcaaaaacat-----gtttgaaaaagttaaatttatca----ttatcattttcca 8244158  T
Q  262 atgctatctttctat-tttatccccttatccaatgtcacaagggcaatg 309  Q
    ||| ||| ||||||| ||||||||||||||||||| | |||| ||||||    
T  8244159 atgttatatttctatatttatccccttatccaatgccccaagagcaatg 8244207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 26469696 - 26469557
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 281  Q
    |||||||  |||||| |||| ||||||| || ||||| |||||||||||||||||||||||| |||| |  ||||| ||||||||| ||| || ||||||    
T  26469696 aaaagtagtatgttttcattggtttcaataatattttgacttttaaaaagttaaatttatcatttttcattatttttcaatgctatatttttatttttat 26469597  T
Q  282 ccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||| ||||||||| |  |||||||| ||||| ||||||||    
T  26469596 ccctttatccaatattccaagggcagtgattagcattctc 26469557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 41898950 - 41898878
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 278  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||| | || |||||||||    
T  41898950 ttcaacaatattttaacttttaaaaagttaaattcatcactttttaccatttttcaatacaatatttctattt 41898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 17402928 - 17403015
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    |||||| ||||||||||||  |  ||| |||||| |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  17402928 gttaagaaaaccaaaagtagtagttttacattagattcaacaatattttgacttttaaaaagttaaattcatcactttttaccatttt 17403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 48938611 - 48938723
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||||||||||||||||  || ||| |||||  ||||||||  |||| |||||||||||| ||||||| |||||||| ||||||||| ||| |    
T  48938611 caatggttaaggaaaccaaaagtagtatatttacattaaattcaacaatgttttgacttttaaaaag-taaatttttcacttttcaccattttctaatac 48938709  T
Q  266 tatctttctatttt 279  Q
     || ||||||||||    
T  48938710 aatatttctatttt 48938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 51424137 - 51424245
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    ||||| |||||||||||||| |||||| |||| | ||||||||  ||||||| |||||||||||||||| |||||||||  | ||||| |||| | || |    
T  51424137 gttaaagaaaccaaaagtaatatgtttacattggattcaacaatgttttaacctttaaaaagttaaattcatcacttttagcaatttttcaatacaatat 51424236  T
Q  271 ttctatttt 279  Q
    |||||||||    
T  51424237 ttctatttt 51424245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 14331802 - 14331925
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| ||||||||||||||||||||||||| ||  || ||| ||||   ||||||||  |||| |||||||||||||||||||  ||| |||| |||||    
T  14331802 gccctcagggcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaattcttcatttttcaccat 14331901  T
Q  256 tttccaatgctatctttctatttt 279  Q
    || ||||| | || ||||||||||    
T  14331902 ttcccaatacaatgtttctatttt 14331925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 44359813 - 44359690
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| ||||||||||||||||||||||||| ||  || ||| ||||   ||||||||  |||| |||||||||||||||||||  |||||||| |||||    
T  44359813 gccctcagggcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaattcttcacttttcaccat 44359714  T
Q  256 tttccaatgctatctttctatttt 279  Q
    || || || | || ||||||||||    
T  44359713 ttcccgatacaatgtttctatttt 44359690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 297
Target Start/End: Original strand, 40920165 - 40920294
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttat--cactttttaccattttccaatgctat 268  Q
    |||||||||||||||||||     |||||||| | |||||||| ||||||||||||||||||||||||| ||  ||||||| |||| ||  |||||| ||    
T  40920165 gttaaggaaaccaaaagtagtggatttgcattggattcaacaatattttaacttttaaaaagttaaattaatcacacttttcaccacttctcaatgcaat 40920264  T
Q  269 ctttcta-ttttatccccttatccaatgtc 297  Q
     |||||| |||||||| |||| ||||||||    
T  40920265 atttctatttttatcctcttaaccaatgtc 40920294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 44286864 - 44286930
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 249  Q
    |||||||||||||||||||| |||| || || ||||||| |||||||||||||||||||||| ||||    
T  44286864 aaaagtaacatgtttgcattggttttaataatattttaatttttaaaaagttaaatttatcattttt 44286930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 41492924 - 41493013
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatg 295  Q
    |||| ||| |||||||||||||||| || ||||| ||||||||| |||| || ||||||| || |||||||||||||| |||| ||||||    
T  41492924 ttcatcaatattttaacttttaaaatgtaaaattcatcacttttcaccacttcccaatgcaatatttctattttatcctcttaaccaatg 41493013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 43168106 - 43168229
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| |||| |||||||||||||| ||||||||  || ||| ||||   ||||||||  |||| ||||||||||||||||| |  |||||||| |||||    
T  43168106 gccctcagggaaatggttaaggaaatcaaaagtagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaactcttcacttttcaccat 43168205  T
Q  256 tttccaatgctatctttctatttt 279  Q
    || ||||| | || ||||||||||    
T  43168206 ttcccaatacaatgtttctatttt 43168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 30222613 - 30222678
Alignment:
Q  184 aaagtaacatgtttgcattagtttcaacaacattttaac-ttttaaaaagttaaatttatcacttt 248  Q
    |||||| ||| |||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  30222613 aaagtagcatatttgcattggtttcaacaatattttaactttttaaaaaattaaatttatcacttt 30222678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 27210705 - 27210792
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacatttt-aacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    ||||| ||| ||||||||| |  |||||||||  ||||||||| |||| |||||||||||||||||||| |||| |||| ||||||||    
T  27210705 ttaagtaaatcaaaagtaataaatttgcattaaattcaacaacttttttaacttttaaaaagttaaattgatcatttttcaccatttt 27210792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 5945450 - 5945508
Alignment:
Q  221 acttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||  || ||||||||||    
T  5945450 acttttaaaaagtaaaatttatcacttttcaccatttttcaatgtcatatttctatttt 5945508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 16691309 - 16691382
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||||||  |||| |||||||||||||||||||  ||| |||||||||||| ||||| | || ||||||||||    
T  16691309 ttcaacaatgttttgacttttaaaaagttaaattcttcattttttaccatttcccaatacaatgtttctatttt 16691382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 8892901 - 8892789
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    ||||||||||||||| |||||||  || |||  |||   || |||||  |||| |||||||||||||||||||  | |||||| ||||||||||||| |     
T  8892901 aatggttaaggaaactaaaagtagtatatttatattgaatttaacaatgttttgacttttaaaaagttaaattctttacttttcaccattttccaatacg 8892802  T
Q  267 atctttctatttt 279  Q
    || ||||||||||    
T  8892801 atgtttctatttt 8892789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 9055941 - 9055897
Alignment:
Q  168 atggttaaggaaaccaaaagtaacatgtttgcattagtttcaaca 212  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||    
T  9055941 atggttaaggaagccaaaagtagcatgtttgcattagtctcaaca 9055897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 254
Target Start/End: Original strand, 44043500 - 44043538
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttttacca 254  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  44043500 ttttgacttttaaaaagttaaatatatcactttttacca 44043538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 10161069 - 10161024
Alignment:
Q  194 gtttgcattagtttcaacaacattttaacttttaaaaagttaaatt 239  Q
    ||||||||||  |||||| | |||||||||||||||||||||||||    
T  10161069 gtttgcattaaattcaacgatattttaacttttaaaaagttaaatt 10161024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 46296276 - 46296231
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 251  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||    
T  46296276 ttcaacaatattttgacttttaaaaagttaaatttattatttttta 46296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 23328437 - 23328493
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    ||||||||  ||||||||||||||||||  | | ||||||||||||| |||||||||    
T  23328437 ttcaacaattttttaacttttaaaaagtctagtctatcactttttactattttccaa 23328493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 34644145 - 34644225
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcacttttta 251  Q
    |||||||||||||||| ||  | |||| ||||   |||||||| ||||||||||||||| ||| ||||| |||| ||||||    
T  34644145 gttaaggaaaccaaaactactaagtttacattgaattcaacaatattttaacttttaaatagtcaaattcatcatttttta 34644225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 162 - 321
Target Start/End: Original strand, 29034658 - 29034818
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  29034658 agggcaatggttaagaaagccaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttcca 29034757  T
Q  262 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    || |||| ||| || |||||||||||||||||||| | ||||| ||||| || ||||||||    
T  29034758 atactatatttatatttttatccccttatccaatgcctcaaggacaatggttagcattctc 29034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 24359839 - 24359713
Alignment:
Q  169 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 268  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  24359839 tggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatccctttttaccattttccattgctat 24359740  T
Q  269 ctttcta-ttttatccccttatccaat 294  Q
     |||||| |||||||||||||||||||    
T  24359739 atttctatttttatccccttatccaat 24359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 166 - 323
Target Start/End: Complemental strand, 5240466 - 5240308
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||| |    
T  5240466 caatggttaaggaagccaaaagtagcatgtttgcattggtttcaataacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatac 5240367  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctcta 323  Q
    ||| |||||| ||||||||| |||||||||| | ||||| ||||| || ||||||||||    
T  5240366 tatatttctatttttatccctttatccaatgcctcaaggacaatggttagcattctcta 5240308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 160 - 297
Target Start/End: Original strand, 42222190 - 42222328
Alignment:
Q  160 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    |||||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  42222190 tgagggcaatggttaaggaaactaaaagtaacatgtttgtattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttc 42222289  T
Q  260 caatgctatctttcta-ttttatccccttatccaatgtc 297  Q
    |||| | || |||||| ||||||||||||||| ||||||    
T  42222290 caataccatatttctatttttatccccttatctaatgtc 42222328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 183 - 321
Target Start/End: Original strand, 40763241 - 40763380
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 281  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||||| ||||||    
T  40763241 aaaagtagcatatttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcaccatttttcaatgttatatttctatttttat 40763340  T
Q  282 ccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||||||||||| | ||||||||||| || ||||||||    
T  40763341 ccccttatccaatgccccaagggcaatggttagcattctc 40763380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 161 - 321
Target Start/End: Complemental strand, 46478694 - 46478537
Alignment:
Q  161 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 260  Q
    |||| |||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||| |    
T  46478694 gaggacaatggttaacgaagccaaaagtaacatatttgcattagtttcaacaatattttaacttttaaaaagttaaatttatca-ttttcactatttttc 46478596  T
Q  261 aatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||| ||| |||||| |||||||||||||||||||||   ||||||||||||| ||||||||    
T  46478595 aatgatatatttctatttttatccccttatccaatgt---aagggcaatgattagcattctc 46478537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 294
Target Start/End: Original strand, 8380411 - 8380545
Alignment:
Q  161 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 260  Q
    ||||||||||||||||||| |||||||||  |||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  8380411 gagggcaatggttaaggaagccaaaagtagtatgttttcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcattttcc 8380510  T
Q  261 aatgctatctttcta-ttttatccccttatccaat 294  Q
    |||||||| ||| || |||||||||||||||||||    
T  8380511 aatgctatatttttatttttatccccttatccaat 8380545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 132 - 321
Target Start/End: Complemental strand, 27053662 - 27053471
Alignment:
Q  132 gggtcttgctaaccattgtcctcagccctgagggcaa--tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 229  Q
    |||||||||||||||||| ||||||   | |||||||  |||||||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||    
T  27053662 gggtcttgctaaccattgccctcag-ggtaagggcaatgtggttaaggaaaccaaaagtagaatgtttgcattggtttcaacaatattttgacttttaaa 27053564  T
Q  230 aagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||||||||||||||||| |||||||||  ||||||| |||||| ||||||||| |||||||||| |  |||| |||||||| | ||||||    
T  27053563 aagttaaatttatcacttttcaccattttctgatgctatatttctatttttatccctttatccaatgccctaaggacaatgattagtattctc 27053471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 321
Target Start/End: Complemental strand, 7323095 - 7322931
Alignment:
Q  158 cctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 257  Q
    |||||| ||||||||||| |||  |||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  7323095 cctgagagcaatggttaaagaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattt 7322996  T
Q  258 tccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    | ||| | ||| |||||| |||||||| |||||||||| || ||||||||||| || ||||||||    
T  7322995 ttcaaggttatatttctatttttatcctcttatccaatatctcaagggcaatggttagcattctc 7322931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 162 - 321
Target Start/End: Original strand, 1910215 - 1910374
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||| |||  |||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |    
T  1910215 agggcaatggttaaagaagtcaaaagtagcatgtttacatttgtttcaacaacattttaacttttaaaaagttaaatttatcatttttcaccattttcta 1910314  T
Q  262 atgctatctttctattttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||| ||| ||||||||||   |||||||| |||| |  ||||||||||||| ||||||||    
T  1910315 atgttatatttctatttttatcccttatcaaatgccctaagggcaatgattagcattctc 1910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 160 - 321
Target Start/End: Original strand, 8292714 - 8292876
Alignment:
Q  160 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    ||||||||||||||||||||  |||||||| |||||||| |||  ||||||||||||||| ||||||||||||  |||||||| |||||| |||||||||    
T  8292714 tgagggcaatggttaaggaagtcaaaagtagcatgtttggattgatttcaacaacattttgacttttaaaaaggcaaatttataacttttcaccattttc 8292813  T
Q  260 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||||||| |||||| ||||||||||||||||||||   ||| | |||||||| ||||||||    
T  8292814 caatgctatatttctatttttatccccttatccaatgctccaaagacaatgattagcattctc 8292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 43567623 - 43567496
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 281  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||| ||||||    
T  43567623 aaaagtatcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactataattctatttttat 43567524  T
Q  282 ccccttatccaatgtcacaagggcaatg 309  Q
    | |||||||||||| | |||||||||||    
T  43567523 ctccttatccaatgccccaagggcaatg 43567496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 295
Target Start/End: Original strand, 22521561 - 22521691
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||| ||  |||||||| |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| | | |||||||||||||    
T  22521561 caatggttaagaaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagttaaatttatcacttctcatcattttccaatgc 22521660  T
Q  266 tatctttcta-ttttatccccttatccaatg 295  Q
    ||| |||||| |||||||| |||||||||||    
T  22521661 tatatttctagttttatcctcttatccaatg 22521691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 172 - 262
Target Start/End: Original strand, 29687457 - 29687547
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  29687457 ttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaattcatcacttttcaccattttccaa 29687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 295
Target Start/End: Original strand, 49069531 - 49069660
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| || || | ||||||||||||| ||||||||||||| |||||||| |||| ||    
T  49069531 aatggttaaggaaaccaaaagtaacatgtttgtattggtttcaacaatatattgatttttaaaaagttagatttatcacttttcaccatttttcaatact 49069630  T
Q  267 atctttcta-ttttatccccttatccaatg 295  Q
    || |||||| |||||||  |||||||||||    
T  49069631 atatttctatttttatcttcttatccaatg 49069660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 41188926 - 41188790
Alignment:
Q  160 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    ||||| |||||||||||||| ||||| |||  |||||||||||  |||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||    
T  41188926 tgaggacaatggttaaggaagccaaatgtagtatgtttgcattgatttcaacagcattttgacttttaaaaagttaaatttatcacctttcaccattttc 41188827  T
Q  260 caatgctatctttcta-ttttatccccttatccaatg 295  Q
    ||||||||| ||| || |||||||| |||||| ||||    
T  41188826 caatgctatatttatatttttatcctcttatcaaatg 41188790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 293
Target Start/End: Original strand, 3681699 - 3681797
Alignment:
Q  196 ttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaa 293  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||| || ||||||||||||||||||    
T  3681699 ttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 321
Target Start/End: Original strand, 36279094 - 36279250
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||||||||| ||  |||||||| ||||||||||||| ||||||||   |||| | ||||||||||||||||||||||||||| ||||||||||||    
T  36279094 gggcaatggttaagaaaggcaaaagtagcatgtttgcattaatttcaaca---ttttgatttttaaaaagttaaatttatcacttttcaccattttccaa 36279190  T
Q  263 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||| ||| || ||||||||  |||||||||| | |||| | |||| || ||||||||    
T  36279191 tgctatatttatatttttatcctattatccaatgccccaagagtaatggttagcattctc 36279250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 5348097 - 5347950
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 271  Q
    |||||||| ||||||||| |||||||||||| |||||||||   |||| ||||||||||||||||||||||||||||| | |||||||||||| ||| ||    
T  5348097 ttaaggaagccaaaagtagcatgtttgcattggtttcaaca---ttttgacttttaaaaagttaaatttatcacttttcatcattttccaatgttatatt 5348001  T
Q  272 tctattt-tatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||||| ||| ||||||| ||||| |  ||||| |||| || ||||||||    
T  5348000 tctatttatattcccttattcaatgccctaagggtaatggttagcattctc 5347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 181 - 321
Target Start/End: Complemental strand, 30538596 - 30538458
Alignment:
Q  181 ccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttt 279  Q
    ||||||||||||||||||||||  ||||||||   |||| | |||||||||||||||||||||| |||| || |||||| ||| |||| |||||| ||||    
T  30538596 ccaaaagtaacatgtttgcattgatttcaaca---ttttgatttttaaaaagttaaatttatcatttttcactattttctaatactatatttctattttt 30538500  T
Q  280 atccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||||||||| |||||| ||||| |||||||| ||||||||    
T  30538499 atccccttatctaatgtcccaaggacaatgattagcattctc 30538458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 191 - 321
Target Start/End: Original strand, 22707049 - 22707179
Alignment:
Q  191 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatc 290  Q
    |||||||||||| ||||||||||||| |||||||||||||||| |||||||||| |||| |  ||||||||||||||| ||||||||||   || ||||     
T  22707049 catgtttgcattggtttcaacaacatgttaacttttaaaaagtaaaatttatcatttttcattattttccaatgctatatttctatttttatcctttatt 22707148  T
Q  291 caatgtcacaagggcaatgattggcattctc 321  Q
    ||||| | ||| ||||||| || ||||||||    
T  22707149 caatgccccaaaggcaatggttagcattctc 22707179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 48454907 - 48454812
Alignment:
Q  215 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 309  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||||||||| | |||||| ||||    
T  48454907 attttgacttttaaaaagttaaatttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaagggtaatg 48454812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 43958200 - 43958087
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 281  Q
    |||||||||||||||||||| ||||||  || ||||| ||||||||||| |||||||||||| |||| || |||||| ||| |||| |||||| ||||||    
T  43958200 aaaagtaacatgtttgcattggtttcagtaatattttgacttttaaaaaattaaatttatcatttttcacaattttctaatactatatttctatttttat 43958101  T
Q  282 ccccttatccaatg 295  Q
    | ||||||||||||    
T  43958100 cgccttatccaatg 43958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 40194818 - 40194884
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 249  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  40194818 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcactttt 40194884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 8258756 - 8258634
Alignment:
Q  182 caaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttta 280  Q
    ||||||||  ||||||||||| |||||||||| ||| | ||| ||||||||||||||||||||||||| |||||||| ||     || |||||| |||||    
T  8258756 caaaagtagtatgtttgcattggtttcaacaaaattatgactattaaaaagttaaatttatcacttttcaccatttttca-----atatttctattttta 8258662  T
Q  281 tccccttatccaatgtcacaagggcaat 308  Q
    ||||||||||| ||| | ||||||||||    
T  8258661 tccccttatccgatgccccaagggcaat 8258634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 279
Target Start/End: Original strand, 46042749 - 46042835
Alignment:
Q  192 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||||||||| |||||||||||||||  ||||| |||||||||||||||| |||||| |||||||| |||| |||| ||||||||||    
T  46042749 atgtttgcattggtttcaacaacatttagactttaaaaaagttaaatttataacttttcaccatttt-caatactatatttctatttt 46042835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 40067045 - 40066921
Alignment:
Q  170 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 269  Q
    ||||||||||  ||||||||  || |||| ||| |||| ||||||||||||  |||||||||||||||||||||| |||| |||||||| ||||  |||     
T  40067045 ggttaaggaaggcaaaagtagtat-tttgtattggttttaacaacattttat-ttttaaaaagttaaatttatcatttttcaccatttttcaatattata 40066948  T
Q  270 tttcta-ttttatccccttatccaatg 295  Q
    |||||| ||||||||||||||||||||    
T  40066947 tttctatttttatccccttatccaatg 40066921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 44297030 - 44296945
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 256  Q
    ||||||||||||||||||| || |||| |||| | |||||| | ||||||||||||||||| ||||||| ||||||||| ||||||    
T  44297030 gttaaggaaaccaaaagtagcaggtttacattggattcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 44296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 31626147 - 31626083
Alignment:
Q  194 gtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| | ||||||    
T  31626147 gtttgcattggtttcaacaacattttgatttttaaaaagttaaatttatcacttttcatcatttt 31626083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 18529282 - 18529196
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 257  Q
    |||||| ||||||||| || |||||||||| ||| |||||||||||||| ||||  ||||| ||||||| ||||||||| |||||||    
T  18529282 gttaagcaaaccaaaattagcatgtttgcaatagattcaacaacattttgacttgaaaaaaattaaattcatcacttttcaccattt 18529196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 16082570 - 16082473
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    |||||| | ||||||||| |||||||||  ||||||||||| | |||||||| |  ||||||||||||| |||||||| |||| |||| |||||||||    
T  16082570 agggcacttgttaaggaatccaaaagtagtatgtttgcattggattcaacaataacttaacttttaaaacgttaaattcatcaattttcaccattttc 16082473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 32204197 - 32204270
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| | |||||| |||||| || ||||||||||    
T  32204197 ttcaaaaatattttaacttttaaaaagttaaattcatcacttttcatcatttttcaatgcaatatttctatttt 32204270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 35404399 - 35404310
Alignment:
Q  155 agccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatca 244  Q
    |||||| |||||| | |||||||||| ||||||||  | |||| |||||| |||||| | ||||||||||||||||||||||||| ||||    
T  35404399 agccctaagggcagttgttaaggaaatcaaaagtagtaggtttacattagattcaacgatattttaacttttaaaaagttaaattcatca 35404310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 48879645 - 48879742
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||||| ||| |||||||| ||| ||| |||||  |||||||| ||||||||||||||||| |||||||  |||||||| || |||| |||||    
T  48879645 caatggttaagaaaatcaaaagtagcatatttacattaaattcaacaatattttaacttttaaaaaattaaattcttcacttttcactatttcccaat 48879742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 29959035 - 29959095
Alignment:
Q  159 ctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacatttt 219  Q
    |||||| ||||| ||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  29959035 ctgaggacaatgattaaggaaaccaaaagtattatgtttgcattggtttcaacaacatttt 29959095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 16957639 - 16957711
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaa 237  Q
    |||||||||||||||| |||||||||| || ||| |||||  |||||||| ||||| |||||||||||||||||    
T  16957639 ggcaatggttaaggaa-ccaaaagtaatatatttacattaaattcaacaatattttgacttttaaaaagttaaa 16957711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 16931867 - 16931962
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||| ||||||||| ||  || ||| |||||  |||||||| ||||| |||||||||||||||||||  |||| |||||| ||||||||||    
T  16931867 aatggttaagaaaaccaaaaatagtatatttacattaaattcaacaatattttgacttttaaaaagttaaattattcac-ttttactattttccaat 16931962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 16937250 - 16937345
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||| ||||||||| ||  || ||| |||||  |||||||| ||||| |||||||||||||||||||  |||| |||||| ||||||||||    
T  16937250 aatggttaagaaaaccaaaaatagtatatttacattaaattcaacaatattttgacttttaaaaagttaaattattcac-ttttactattttccaat 16937345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 263
Target Start/End: Complemental strand, 30388793 - 30388697
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||| |||  ||||||||  ||||||  |||  |||||| || ||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  30388793 aatggttaaagaagtcaaaagtagtatgtttatattgatttcaataatattttgacttttaaaaagttaaatttatcatttttcaccatttttcaat 30388697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 40774336 - 40774264
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 278  Q
    |||| ||| ||||||||||||||||||||||||| |||| |||| | |||||| |||||| || |||||||||    
T  40774336 ttcatcaatattttaacttttaaaaagttaaattcatcaattttcatcatttttcaatgcaatatttctattt 40774264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 4686127 - 4686080
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  4686127 ttttaacttttaaaaagttaaattaatcacttttcaccatttttcaat 4686080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 35239915 - 35239829
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    ||||||| ||| |||||||| |||||| ||||   ||||| | |||||||||||||||||||||||||| ||||| ||||| ||||||    
T  35239915 gttaaggtaacaaaaagtaatatgttt-cattgaattcaatagcattttaacttttaaaaagttaaattcatcacgttttatcatttt 35239829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 6548533 - 6548603
Alignment:
Q  194 gtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 264  Q
    ||||||||| | | |||||| ||||||||||||||||||||||||| |||| |||| ||| ||| ||||||    
T  6548533 gtttgcattggatccaacaatattttaacttttaaaaagttaaattcatcatttttcaccgtttcccaatg 6548603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 257
Target Start/End: Complemental strand, 10575896 - 10575802
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 257  Q
    ||||||||||||| |||| ||||||||  || ||| ||||   |||||||| ||||  | |||||||||||||||||| |||||||| |||||||    
T  10575896 gggcaatggttaaagaaatcaaaagtagtatattttcattgaattcaacaatatttggagttttaaaaagttaaatttttcacttttcaccattt 10575802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 31360363 - 31360313
Alignment:
Q  229 aaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||||||||||||||||||||||||||| ||||| | || ||||||||||    
T  31360363 aaagttaaatttatcactttttaccatttcccaatacaatatttctatttt 31360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 44260631 - 44260558
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatca 244  Q
    |||||||||||||||| ||  ||||||||||||  ||||| ||||||||  |||||||||| ||||||| ||||    
T  44260631 gttaaggaaaccaaaattagtatgtttgcattaaattcaataacattttggcttttaaaaaattaaattcatca 44260558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 1907717 - 1907586
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    ||||||||||||||| |||  |||||||||||   |||||||| ||||| | | ||||||| ||||||| || | ||||||||||||| |||| | || |    
T  1907717 gttaaggaaaccaaatgtat-atgtttgcattgcattcaacaatattttgattattaaaaaattaaattcattattttttaccatttttcaatacaatat 1907619  T
Q  271 ttct-attttatccccttatccaatgtcacaag 302  Q
    ||||  ||||||||  |||||||||||| ||||    
T  1907618 ttctctttttatccttttatccaatgtctcaag 1907586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 3720198 - 3720135
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||||||||||||||||||||||||||| |||  |||||||  |||||| || || |||||||    
T  3720198 ttttaacttttaaaaagttaaatttatcattttacaccatttgtcaatgcaatattactatttt 3720135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 5543061 - 5543112
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 257  Q
    ||||||||  |||||||||||||||||| |||| |||||||||| |||||||    
T  5543061 ttcaacaattttttaacttttaaaaagtcaaatatatcacttttcaccattt 5543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 35003630 - 35003673
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||    
T  35003630 ttttaatttttaaaaagttaaattaatcacttttcaccattttc 35003673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 43189731 - 43189688
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttt 249  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||    
T  43189731 ttcaacaatattttaacttttaaaaagtcaaattcatcactttt 43189688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 44391019 - 44391082
Alignment:
Q  215 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 278  Q
    ||||||||||||||||||| ||||| || | ||||||| |||||| ||||| || |||||||||    
T  44391019 attttaacttttaaaaagtcaaattcataattttttacaattttctaatgcaatatttctattt 44391082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 18800242 - 18800197
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 251  Q
    |||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  18800242 ttcaacaatattgtaatttttaaaaagttaaatttatcactcttta 18800197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 46423388 - 46423425
Alignment:
Q  221 acttttaaaaagttaaatttatcactttttaccatttt 258  Q
    |||||||| || ||||||||||||||||||||||||||    
T  46423388 acttttaagaaattaaatttatcactttttaccatttt 46423425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 5977809 - 5977757
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    ||||||||  |||||||||||||||||||||||  ||||||||| || |||||    
T  5977809 ttcaacaattttttaacttttaaaaagttaaatccatcacttttcactatttt 5977757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 156 - 318
Target Start/End: Complemental strand, 35653399 - 35653236
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||| |||||    
T  35653399 gccctcagggcaatggttaaggaagccaaaagtaccatgtttgcattggtttcaacaacattttgattttcaaaaagttaaatttatcacttttcaccat 35653300  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcatt 318  Q
    ||||||||||||| |||||| ||||||||||||||||||||   ||||||||||| || |||||    
T  35653299 tttccaatgctatatttctatttttatccccttatccaatgcaccaagggcaatggttagcatt 35653236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 294
Target Start/End: Original strand, 34546743 - 34546882
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  34546743 gccctaagggcaatggttaaggaagccaaaagtatcatttttgcattagtttcaacaacattttaacttttaaaaaattaaatttatcacttttcaccat 34546842  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaat 294  Q
    ||| ||||| ||| |||||| |||||||||||||||||||    
T  34546843 ttttcaatgttatatttctatttttatccccttatccaat 34546882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 159 - 323
Target Start/End: Complemental strand, 4422105 - 4421940
Alignment:
Q  159 ctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    |||||||||||||||||||||  |||||||||||||||||||||   |||||||||||||| | || |||||||||||||||||||||||| ||||||||    
T  4422105 ctgagggcaatggttaaggaagtcaaaagtaacatgtttgcattgacttcaacaacattttgatttgtaaaaagttaaatttatcacttttcaccatttt 4422006  T
Q  259 ccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctcta 323  Q
    |||||||||| |||||| |||||||| ||||||||||| |  |||||||||| ||  |||||||||    
T  4422005 ccaatgctatatttctatttttatcctcttatccaatgccctaagggcaatggttaacattctcta 4421940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 156 - 321
Target Start/End: Complemental strand, 16315676 - 16315512
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| |||||||||||||||||| ||||||||| | |||||||||| |||||||||||||||| ||| ||||||||||  ||||||||||||| |||||    
T  16315676 gccctcagggcaatggttaaggaagccaaaagtagcgtgtttgcattggtttcaacaacattttgactattaaaaagtt--atttatcacttttcaccat 16315579  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||||||||||| |||||| |||||||||||||||| ||| |  ||||||| || || ||||||||    
T  16315578 tttccaatgctatatttctatttttatccccttatccgatgcccaaagggcagtggttagcattctc 16315512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 167 - 321
Target Start/End: Original strand, 35945222 - 35945377
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    |||||||||| || |||||| || ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |    
T  35945222 aatggttaagaaagccaaaaatatcatatttgcattagtttcaacaacattttaacatttaaaaagttaaatttatcacttttcactattttccaatgtt 35945321  T
Q  267 atctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    || |||||| |||||| ||||||||||||  | |||| ||||||||| ||||||||    
T  35945322 atatttctatttttattcccttatccaataccccaagagcaatgattagcattctc 35945377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 4962655 - 4962507
Alignment:
Q  161 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 260  Q
    |||||||||||||| | ||  |||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||    
T  4962655 gagggcaatggttaggaaagacaaaagtagcatgtttgtattagtttcaacaacattttgactttaaaaaagttaaatttatcacttttcatcattttcc 4962556  T
Q  261 aatgctatctttctattttatccccttatccaatgtcacaagggcaatg 309  Q
    |||| ||| ||||||||||    |||||||||||||| |||||||||||    
T  4962555 aatgttatatttctatttttattccttatccaatgtcccaagggcaatg 4962507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 182 - 321
Target Start/End: Complemental strand, 43414182 - 43414042
Alignment:
Q  182 caaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttta 280  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| |||| |||| |||||||||||||||||| |||||| |||||    
T  43414182 caaaagtaacatgtttgcattggtttcaacaacattttgatttttaaaaagttaaattgatcatttttcaccattttccaatgctatatttctattttta 43414083  T
Q  281 tccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||||||||  |||| ||||||||||  || ||||||||    
T  43414082 tccccttatcccttgtcccaagggcaattcttagcattctc 43414042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 165 - 307
Target Start/End: Complemental strand, 25017426 - 25017283
Alignment:
Q  165 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 264  Q
    |||||||||||||||  |||||||| |||||||| ||| |||||||| | ||||| ||||||||||||||||||||||||||||| || ||||||||||     
T  25017426 gcaatggttaaggaagtcaaaagtagcatgtttgtattggtttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaata 25017327  T
Q  265 ctatctttcta-ttttatccccttatccaatgtcacaagggcaa 307  Q
    |||| |||||| |||||||||||||||||||| | |||||||||    
T  25017326 ctatatttctatttttatccccttatccaatgcctcaagggcaa 25017283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 5151468 - 5151594
Alignment:
Q  170 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 269  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||| |||     
T  5151468 ggttaaggaaggcaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttata 5151567  T
Q  270 tttcta-ttttatccccttatccaatg 295  Q
    |||||| ||||||||||||||| ||||    
T  5151568 tttctatttttatccccttatcaaatg 5151594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 28143253 - 28143100
Alignment:
Q  170 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 269  Q
    |||||| ||| ||||||||| |||||||| |||||||||||||||||||| | |||||||||||||||||||| | |||| ||||||| |||||| |||     
T  28143253 ggttaaagaagccaaaagtagcatgtttgtattagtttcaacaacattttgatttttaaaaagttaaatttattatttttcaccatttcccaatgttata 28143154  T
Q  270 tttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctct 322  Q
    |||||| ||||||| |||||| ||||||| ||||||||||| || |||||||||    
T  28143153 tttctatttttatctccttattcaatgtcccaagggcaatggttagcattctct 28143100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 13951373 - 13951258
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    ||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||| |||||||||||  |||||||||||||||| |||||||| |||    
T  13951373 gggcaatggttaaggaagccaaaagtagcatgcttgcattggtttcaacaacattttgacttttaaaaaaataaatttatcacttttcaccatttttcaa 13951274  T
Q  263 tgctatctttctattt 278  Q
    |||||| |||||||||    
T  13951273 tgctatatttctattt 13951258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 156 - 322
Target Start/End: Original strand, 39567868 - 39568035
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| ||||||||| ||||||||  |||||||| |||||||||||| ||||||||||  |||| | |||||||||||||||||||||| |||| | |||    
T  39567868 gccctcagggcaatgattaaggaagtcaaaagtagcatgtttgcattggtttcaacaatgttttgatttttaaaaagttaaatttatcatttttcatcat 39567967  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctct 322  Q
    ||||||||||||| ||| || ||||||||| |||||||||| | ||||||||||| ||  ||||||||    
T  39567968 tttccaatgctatatttatatttttatcccattatccaatgccccaagggcaatggttatcattctct 39568035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 12914140 - 12914261
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    |||||||||| ||||||||||||| |||||||||  ||||||||||| |||||||||| ||||| | ||||||||| ||||||||||||||||| |||||    
T  12914140 gccctgagggtaatggttaaggaagccaaaagtagtatgtttgcattggtttcaacaatattttgatttttaaaaaattaaatttatcacttttcaccat 12914239  T
Q  256 tttccaatgctatctttctatt 277  Q
    ||| ||||||||| ||||||||    
T  12914240 ttttcaatgctatatttctatt 12914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 164 - 329
Target Start/End: Original strand, 8410115 - 8410281
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||| |||||||| |||||| || |||||||| ||| |||| || |||||||| |||||||||||||||||||||||| |||||||||||||| |||    
T  8410115 ggcaatgattaaggaagccaaaactagcatgtttgtattggttttaataacattttgacttttaaaaagttaaatttatcattttttaccattttctaat 8410214  T
Q  264 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctctatctttt 329  Q
     |||| ||| || ||||||||||||||| |||  | ||| ||||||| || ||||||||||| ||||    
T  8410215 actatatttttatttttatccccttatctaataccccaaaggcaatggttagcattctctatttttt 8410281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 167 - 302
Target Start/End: Complemental strand, 3639207 - 3639072
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    |||||||||||||  ||||||||| ||||||||||| |||||||||| |||| | |||||||||| |||||||||||||| || |||||||||||||| |    
T  3639207 aatggttaaggaagtcaaaagtaatatgtttgcattggtttcaacaatatttga-cttttaaaaaattaaatttatcactcttcaccattttccaatgtt 3639109  T
Q  267 atctttcta-ttttatccccttatccaatgtcacaag 302  Q
    || |||||| |||||||||||||| ||||||| ||||    
T  3639108 atatttctatttttatccccttattcaatgtctcaag 3639072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 164 - 287
Target Start/End: Complemental strand, 25568428 - 25568304
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||||| |||||||| | |||||||||||||||| |||||||||| | |||||| ||||    
T  25568428 ggcaatggttaaggaaactaaaattaacatgtttgcattggtttcaataacattttgatttttaaaaagttaaatgtatcacttttcatcatttttcaat 25568329  T
Q  264 gctatctttcta-ttttatcccctt 287  Q
    ||||| ||| || ||||||||||||    
T  25568328 gctatatttatatttttatcccctt 25568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 196 - 321
Target Start/End: Original strand, 37243852 - 37243977
Alignment:
Q  196 ttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatg 295  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||| ||| ||||||   || ||||||||||    
T  37243852 ttgcattgatttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttccaatattatatttttatttttatcctttatccaatg 37243951  T
Q  296 tcacaagggcaatgattggcattctc 321  Q
     | |||||||||||||| ||||||||    
T  37243952 cctcaagggcaatgattagcattctc 37243977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 27823233 - 27823364
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    ||||||||| ||||||||  ||||| || |||||||| |||  |||||||   ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  27823233 agggcaatgattaaggaagtcaaaattagcatgtttgtattgatttcaac---attttaatttttaaaaagttaaatttatcacttttcaccattttcca 27823329  T
Q  262 atgctatctttcta-ttttatccccttatccaatg 295  Q
    || |||| |||||| ||||||||||||||||||||    
T  27823330 atactatatttctatttttatccccttatccaatg 27823364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 39692984 - 39693087
Alignment:
Q  165 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 264  Q
    |||||||||||||||  ||||||||||||||||| |||  ||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||| |||||    
T  39692984 gcaatggttaaggaagtcaaaagtaacatgtttgtattgatttcaacaatattttaacttttaaaaagataaatttatcattttttaccacttttcaatg 39693083  T
Q  265 ctat 268  Q
    ||||    
T  39693084 ctat 39693087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 338881 - 338754
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 281  Q
    ||||||| |||||||||||| |||||||||| ||||| | ||||||||||||||||||||||||||||| |||||| ||||   || ||| || ||||||    
T  338881 aaaagtagcatgtttgcatttgtttcaacaatattttgatttttaaaaagttaaatttatcactttttatcatttttcaatatcatatttttatttttat 338782  T
Q  282 ccccttatccaatgtcacaagggcaatg 309  Q
    ||| |||||||||| | |||||||||||    
T  338781 ccctttatccaatgccccaagggcaatg 338754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 295
Target Start/End: Original strand, 1759821 - 1759922
Alignment:
Q  195 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaa 293  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| |||| |||| |||||| |||||||| |||||||||    
T  1759821 tttgcattggttttaacaacattttgacttttaaaaagttaaatttatcacttttctccatttttcaatactatatttctatttttatcctcttatccaa 1759920  T
Q  294 tg 295  Q
    ||    
T  1759921 tg 1759922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 12068307 - 12068195
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||| ||  ||||| || |||||||| ||| || |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |    
T  12068307 caatggttaagaaagtcaaaa-tagcatgtttgtattggtgtcaataacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatac 12068209  T
Q  266 tatctttctatttt 279  Q
    ||| ||||||||||    
T  12068208 tatatttctatttt 12068195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 295
Target Start/End: Complemental strand, 1479232 - 1479140
Alignment:
Q  204 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 295  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| |  ||||| ||||||||| |||||| |||||||||||||| |||||    
T  1479232 gtttcaataacattttgacttttaaaaagttaaatttatcacttttcattatttttcaatgctatatttctatttttatccccttattcaatg 1479140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 134 - 279
Target Start/End: Original strand, 39167538 - 39167683
Alignment:
Q  134 gtcttgctaaccattgtcctca-gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaag 232  Q
    |||||||||||||||| ||| | ||||| ||||||||||||||| ||||||||||||| || ||| ||||   || |||||  |||| | ||||||||||    
T  39167538 gtcttgctaaccattgccctgatgcccttagggcaatggttaagaaaaccaaaagtaatatatttacattgaatttaacaatgttttgatttttaaaaag 39167637  T
Q  233 ttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    |||||||| | |||||| ||||||||||||| | || ||||||||||    
T  39167638 ttaaattt-ttacttttcaccattttccaatacaatgtttctatttt 39167683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 318
Target Start/End: Original strand, 15915871 - 15915960
Alignment:
Q  230 aagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcatt 318  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||||| | |||| |||||| || |||||    
T  15915871 aagttaaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaagtgcaatggttagcatt 15915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 4838259 - 4838322
Alignment:
Q  169 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaag 232  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  4838259 tggttaaggaagccaaaaataacatgtttgcattagtttcaacaatattttgacttttaaaaag 4838322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 20184677 - 20184570
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    |||||||||| ||||||||| ||| ||| ||||| ||||||||  |||||||||||||||||| ||||| ||||||||| ||| |||  |||||| || |    
T  20184677 gttaaggaaatcaaaagtaatatgattgtattagattcaacaatgttttaacttttaaaaagtgaaattcatcacttttcaccgtttctcaatgcaatat 20184578  T
Q  271 ttctattt 278  Q
    ||||||||    
T  20184577 ttctattt 20184570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 40099352 - 40099450
Alignment:
Q  211 caacattttaacttttaaaaagttaaatttatcactttttacca-ttttccaatgctatctttctattttatccccttatccaatgtcacaagggcaatg 309  Q
    |||||||| || |||||||| |||||||||||||||||| |||| |||| ||||||||| ||| |||||| ||||||||||||||| ||||||| |||||    
T  40099352 caacatttcaatttttaaaaggttaaatttatcacttttcaccattttttcaatgctatatttttatttt-tccccttatccaatgccacaaggacaatg 40099450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 39335454 - 39335540
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    |||| |||||||||| ||  ||||||| ||| | |||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  39335454 ttaaagaaaccaaaattattatgtttgtattggattcaacaacattttgacttttaaaaagttaaattcatcactttttactatttt 39335540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 322
Target Start/End: Complemental strand, 10017727 - 10017599
Alignment:
Q  192 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatc 290  Q
    ||||||||||| |||| ||||||||||||||||||||||||||  |||||||| |||| |||| |||||| | |||| |||||| |||||||| ||||||    
T  10017727 atgtttgcattggttttaacaacattttaacttttaaaaagtt--atttatcaattttcacca-tttccagtactatatttctatttttatcctcttatc 10017631  T
Q  291 caatgtcacaagggcaatgattggcattctct 322  Q
     |||||| | ||| ||||| ||  ||||||||    
T  10017630 aaatgtctctaggacaatggttaacattctct 10017599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 10406772 - 10406873
Alignment:
Q  175 aggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttct 274  Q
    ||||||||||||||||||| |||||||| | |||||||| ||||| |  |||||||| |||||||||||||||||  ||||||| |||| | || |||||    
T  10406772 aggaaaccaaaagtaacatttttgcattggattcaacaatattttga-atttaaaaaattaaatttatcacttttctccatttttcaatacaatatttct 10406870  T
Q  275 att 277  Q
    |||    
T  10406871 att 10406873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 678430 - 678522
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||||||||| || || |||| || | | ||||||||  ||||||||||||||| |||||||| || |||||| |||||||||||||    
T  678430 gttaaggaaaccaaaattagcaggtttacaatggattcaacaattttttaacttttaaaaggttaaattcattacttttcaccattttccaat 678522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 19894798 - 19894906
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    |||||||||| ||||||||  | ||||| ||| | || ||||| ||||||||||||||||||||||||| ||||  ||| ||||||||  ||||| || |    
T  19894798 gttaaggaaatcaaaagtataaggtttgaattggatttaacaatattttaacttttaaaaagttaaattcatcatatttaaccattttttaatgcaatat 19894897  T
Q  271 ttctatttt 279  Q
    |||||||||    
T  19894898 ttctatttt 19894906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 38610386 - 38610313
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||||||  |||| |||||||||||||||||||  |||||||||| |||||| |||||| || ||||||||||    
T  38610386 ttcaacaatgttttgacttttaaaaagttaaattcttcactttttatcatttttcaatgcaatgtttctatttt 38610313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 15915014 - 15915083
Alignment:
Q  167 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaat 238  Q
    |||||||||||||||||||||||  |||||||  ||  |||||| || ||||||||||||||||||||||||    
T  15915014 aatggttaaggaaaccaaaagtagtatgtttg--ttgatttcaaaaatattttaacttttaaaaagttaaat 15915083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 39042170 - 39042096
Alignment:
Q  165 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatt 239  Q
    ||||||||||| ||| |||||| || ||||||| ||||    ||||||||||||||||||||||||| |||||||    
T  39042170 gcaatggttaaagaagccaaaaatagcatgtttacattgacatcaacaacattttaacttttaaaaaattaaatt 39042096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 279
Target Start/End: Complemental strand, 6823858 - 6823773
Alignment:
Q  195 tttgcattagtttcaacaacattttaacttttaaaaagtt-aaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    |||||||| | |||||||| |||||||||||||||||||| |||||||| |||||  ||| |||||| || | || ||||||||||    
T  6823858 tttgcattggattcaacaatattttaacttttaaaaagttaaaatttattactttccaccgttttccgatacaatatttctatttt 6823773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 12349628 - 12349585
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    |||||||||||||||||| |||| |||||||||| |||||||||    
T  12349628 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 12349585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 24288502 - 24288553
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 257  Q
    ||||||||  || |||||||||||||||||||| |||||||||| |||||||    
T  24288502 ttcaacaattttgtaacttttaaaaagttaaatctatcacttttcaccattt 24288553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 24373719 - 24373668
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 257  Q
    ||||||||  || |||||||||||||||||||| |||||||||| |||||||    
T  24373719 ttcaacaattttgtaacttttaaaaagttaaatctatcacttttcaccattt 24373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 28599738 - 28599691
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||||||||||||| |||||||||| |||| || ||||||||||    
T  28599738 ttttaacttttaaaaagtcaaatttatcatttttcactattttccaat 28599691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 3015144 - 3015106
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatca 244  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  3015144 ttcaacaatattttaacttttaaaaagttaaattaatca 3015106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 3242047 - 3241974
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    |||||||| |||||||||||||||||||| |||| |||| |||| || | || ||||||| || ||| ||||||    
T  3242047 ttcaacaatattttaacttttaaaaagtttaattcatcaattttcactacttcccaatgcaatatttttatttt 3241974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 16899680 - 16899635
Alignment:
Q  192 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaa 237  Q
    ||||||| ||| | |||||||||||||| |||||||||||||||||    
T  16899680 atgtttgtattggattcaacaacattttgacttttaaaaagttaaa 16899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 27535114 - 27535167
Alignment:
Q  211 caacattttaacttttaaaaagtt-aaatttatcactttttaccattttccaat 263  Q
    ||||||||||||||||||||| || ||||| ||||||||| |||||||| ||||    
T  27535114 caacattttaacttttaaaaacttaaaattcatcacttttcaccatttttcaat 27535167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 5058772 - 5058812
Alignment:
Q  218 ttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    |||| ||||||||||||||||||||||||||| || |||||    
T  5058772 ttaatttttaaaaagttaaatttatcacttttcacaatttt 5058812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 17168691 - 17168763
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 278  Q
    |||| ||| ||||||| ||||||||||| ||||| |||| |||| ||| |||| |||||| || |||||||||    
T  17168691 ttcagcaatattttaaattttaaaaagtcaaattcatcatttttcaccgtttttcaatgcaatatttctattt 17168763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 28996229 - 28996285
Alignment:
Q  207 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||  ||||||||||||||||||| |||| |  |||||| |||||||||||||    
T  28996229 tcaacaattttttaacttttaaaaagttgaattcacaacttttcaccattttccaat 28996285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 9e-43; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 162 - 297
Target Start/End: Original strand, 2966511 - 2966647
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||||||| | ||||||| ||| |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  2966511 agggcaatggttaaggaagctaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttcca 2966610  T
Q  262 atgctatctttcta-ttttatccccttatccaatgtc 297  Q
    ||| ||| |||||| ||||||||||||||||||||||    
T  2966611 atgttatatttctatttttatccccttatccaatgtc 2966647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 162 - 321
Target Start/End: Original strand, 6999173 - 6999333
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  6999173 agggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccattttcca 6999272  T
Q  262 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    || |||| |||||| ||||||| ||||||||| || | ||   ||||||||| ||||||||    
T  6999273 atactatatttctatttttatctccttatccattgccccagaagcaatgattagcattctc 6999333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 133 - 318
Target Start/End: Complemental strand, 39085952 - 39085773
Alignment:
Q  133 ggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaag 232  Q
    ||||||||||||||||||||||||        |||||||||||||||  |||||| | ||||||||||||  ||||||||||||||| ||||||||||||    
T  39085952 ggtcttgctaaccattgtcctcaga-------gcaatggttaaggaagtcaaaagcagcatgtttgcattgatttcaacaacattttgacttttaaaaag 39085860  T
Q  233 ttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcatt 318  Q
    ||||||||||||||||||| |||||||||||| ||| |||||| ||||||||| |||||||||||| |||| |||||| || |||||    
T  39085859 ttaaatttatcactttttatcattttccaatgttatatttctatttttatccctttatccaatgtcccaagagcaatggttagcatt 39085773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 162 - 308
Target Start/End: Original strand, 16361537 - 16361684
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  16361537 agggcaatgattaaggaagccaaaagtaacatgtttgcattggtttcgacaacattttgacttttataaagttaaatttatcaatttttaccattttcca 16361636  T
Q  262 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaat 308  Q
    ||| ||| |||||| |||||| |||||||||||||   ||||||||||    
T  16361637 atgttatatttctatttttattcccttatccaatgctccaagggcaat 16361684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 39401671 - 39401513
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    ||||||||||||||||| ||||||||| |||||||| ||| |||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||    
T  39401671 gggcaatggttaaggaagccaaaagtagcatgtttgtattggtttcaacaaaattttgacttttaaaaagttaaa-ttatcacttttcaccatttttcaa 39401573  T
Q  263 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    || ||| |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  39401572 tgttatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 39401513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 765258 - 765128
Alignment:
Q  192 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatc 290  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||| |||||| |||||||||||||||    
T  765258 atgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttatccccttatc 765159  T
Q  291 caatgtcacaagggcaatgattggcattctc 321  Q
    ||||| | ||||||||||| || ||||||||    
T  765158 caatgccccaagggcaatggttagcattctc 765128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 161 - 308
Target Start/End: Original strand, 862559 - 862707
Alignment:
Q  161 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 260  Q
    |||||||||| |||||||| ||||||||| |||||||||||| |||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  862559 gagggcaatgattaaggaagccaaaagtagcatgtttgcattggtttcaacaagattttgactcttaaaaagttaaatttatcacttttcaccattttcc 862658  T
Q  261 aatgctatctttcta-ttttatccccttatccaatgtcacaagggcaat 308  Q
    ||| |||| |||||| ||||||||| |||| ||||| |  |||||||||    
T  862659 aatactatatttctatttttatcccattattcaatgccctaagggcaat 862707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 158 - 321
Target Start/End: Original strand, 27495090 - 27495254
Alignment:
Q  158 cctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 257  Q
    ||||||||||||||||||||||  ||||||||  ||||||||||| |||||||||||||||| | |||||||| |||||||||||||||||| |||||||    
T  27495090 cctgagggcaatggttaaggaagtcaaaagtagtatgtttgcattggtttcaacaacattttgatttttaaaatgttaaatttatcacttttcaccattt 27495189  T
Q  258 tccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    || |||| ||| ||| || |||||||||||||| ||||| | |||| |||||| || ||||||||    
T  27495190 tctaatgttatatttttatttttatccccttattcaatgccccaagtgcaatggttagcattctc 27495254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 131 - 296
Target Start/End: Complemental strand, 17118542 - 17118376
Alignment:
Q  131 tgggtcttgctaaccattgtcctca-gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 229  Q
    ||||||||||||||||||| ||||| ||| ||||| |||||||||||||| |||||| |||||| |||||||| |||||||||||| ||| | |||||||    
T  17118542 tgggtcttgctaaccattgccctcatgccttgaggacaatggttaaggaagccaaaaataacatatttgcattggtttcaacaaca-tttgagttttaaa 17118444  T
Q  230 aagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgt 296  Q
    ||||||||||||||| |||| | ||||||||| |  ||| |||||| ||||||||| |||||||||||    
T  17118443 aagttaaatttatcatttttcaacattttccagtattatatttctatttttatccctttatccaatgt 17118376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 161 - 321
Target Start/End: Complemental strand, 17074626 - 17074466
Alignment:
Q  161 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 260  Q
    ||||||||||||||||||| |||||| || ||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||      
T  17074626 gagggcaatggttaaggaagccaaaaatagcatatttgcattagtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-t 17074528  T
Q  261 aatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    | || ||| |||||| ||||||||| ||||| |||| |  |||||||||| || ||||||||    
T  17074527 agtgttatatttctatttttatccctttatctaatgccctaagggcaatggttagcattctc 17074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 161 - 294
Target Start/End: Original strand, 41436448 - 41436582
Alignment:
Q  161 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 260  Q
    ||||||||||||||| |||  |||||||| |||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||| | |||||| |    
T  41436448 gagggcaatggttaatgaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaagtttatcacttttcatcatttttc 41436547  T
Q  261 aatgctatctttcta-ttttatccccttatccaat 294  Q
    ||| |||| ||| || |||||||||||||| ||||    
T  41436548 aatactatatttttatttttatccccttattcaat 41436582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 161 - 321
Target Start/End: Complemental strand, 17056196 - 17056036
Alignment:
Q  161 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 260  Q
    ||||||||||||||||||| |||||| || ||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||      
T  17056196 gagggcaatggttaaggaagccaaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-t 17056098  T
Q  261 aatgctatctttc-tattttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    | || ||| |||| | ||||||||| |||||||||| |  |||||||||| || ||||||||    
T  17056097 agtgttatatttctttttttatccctttatccaatgccctaagggcaatggttagcattctc 17056036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 161 - 321
Target Start/End: Complemental strand, 17068643 - 17068483
Alignment:
Q  161 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 260  Q
    ||||||||||||||||||| |||||| || ||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||      
T  17068643 gagggcaatggttaaggaagccaaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-t 17068545  T
Q  261 aatgctatctttc-tattttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    | || ||| |||| | ||||||||| |||||||||| |  |||||||||| || ||||||||    
T  17068544 agtgttatatttctttttttatccctttatccaatgccctaagggcaatggttagcattctc 17068483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 23685788 - 23685689
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||| |||||||| ||||||||||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  23685788 ggcaatgtttaaggaagccaaaagtaacatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcacttttccccattttccaat 23685689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 166 - 308
Target Start/End: Original strand, 33726355 - 33726498
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||||||| ||||| || |||||||| |||  ||||||||| ||||||||||||| |||||||||||||| | |||| |||||||| |||| |    
T  33726355 caatggttaaggaaatcaaaaatagcatgtttgtattgatttcaacaatattttaacttttagaaagttaaatttattatttttcaccatttttcaatac 33726454  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaat 308  Q
    ||| ||| || |||||||||||||||||||| | ||||||||||    
T  33726455 tatatttttatttttatccccttatccaatgccccaagggcaat 33726498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 312
Target Start/End: Original strand, 17603811 - 17603933
Alignment:
Q  191 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 289  Q
    ||||||||||||  |||||| |||||||| |||||||||||||||||||||||| |||||| |||||| ||||||||| |||||| ||||||| | ||||    
T  17603811 catgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcattttttatcatttttcaatgctatatttctatttttatcgcgttat 17603910  T
Q  290 ccaatgtcacaagggcaatgatt 312  Q
    |||||| | ||||||||||||||    
T  17603911 ccaatgccccaagggcaatgatt 17603933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 33864349 - 33864474
Alignment:
Q  185 aagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatcc 283  Q
    ||||||||| |||||||| |||||||||| ||||| |||||||||| ||||||||||| |||||| ||||||||||||||| || ||| || ||||||||    
T  33864349 aagtaacatatttgcattggtttcaacaatattttgacttttaaaatgttaaatttattacttttcaccattttccaatgcgatatttttatttttatcc 33864448  T
Q  284 ccttatccaatgtcacaagggcaatg 309  Q
     ||||| ||||||| |||||||||||    
T  33864449 tcttattcaatgtctcaagggcaatg 33864474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 17095204 - 17095108
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    ||||||||||||||||||  ||||| || ||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  17095204 agggcaatggttaaggaatgcaaaaatagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 17095108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 156 - 321
Target Start/End: Original strand, 1321132 - 1321299
Alignment:
Q  156 gccctgagggcaatgg-ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttacca 254  Q
    ||||| |||||||||| |||||||| |||||  || ||||||| ||||  ||||||||||||||| | ||||||| |||||||||||| | |||||||||    
T  1321132 gccctcagggcaatgggttaaggaagccaaagttagcatgtttacattgatttcaacaacattttgatttttaaagagttaaatttattattttttacca 1321231  T
Q  255 ttttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||||||| ||| |||||| |||||||| |||||||||||   ||||| ||||| || ||||||||    
T  1321232 ttttccaatgttatatttctatttttatcctcttatccaatgctccaaggacaatggttagcattctc 1321299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 156 - 310
Target Start/End: Complemental strand, 9201638 - 9201484
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| |||||||| ||||| |||  ||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  9201638 gccctcagggcaatagttaaagaagtcaaaagtaacatgtttgtattggtt-caacaacattttgacttttaaaaagttaaatttatcacttttcaccat 9201540  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatga 310  Q
    |||  |||  ||| || ||| ||||||| | |||||||||||| ||||| ||||||    
T  9201539 tttttaatattatattcctatttttatctcattatccaatgtctcaaggacaatga 9201484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 11445454 - 11445379
Alignment:
Q  165 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaattt 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  11445454 gcaatggttaaggaaaccaaaagtaacatgtttgcattggtttcaacaacattttgacatttaaaaagttaaattt 11445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 44299815 - 44299659
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    |||||||||||||| |||||| ||  ||| || |||| |||||||||| ||||| |||||||||| |||||||||||||||||| |||||||| | | ||    
T  44299815 caatggttaaggaagccaaaaatagtatgcttacattggtttcaacaatattttgacttttaaaatgttaaatttatcacttttcaccatttttcgaggc 44299716  T
Q  266 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||| |||||| |||||||| |||| |||||| | |||  ||||||||| ||||||||    
T  44299715 tatatttctatttttatcctcttacccaatgccccaaaagcaatgattagcattctc 44299659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 295
Target Start/End: Complemental strand, 35445423 - 35445294
Alignment:
Q  168 atggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaactttt-aaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    ||||||||| ||  |||||||| |||||||| ||| |||||||||| ||||| |||||| ||||||||||||||||||||||| |||||||| ||||| |    
T  35445423 atggttaagcaagtcaaaagtagcatgtttgtattggtttcaacaatattttgacttttgaaaaagttaaatttatcacttttcaccatttttcaatgtt 35445324  T
Q  267 atctttcta-ttttatccccttatccaatg 295  Q
    || ||| || |||||||||||||| |||||    
T  35445323 atatttatatttttatccccttattcaatg 35445294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 464770 - 464884
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatca-ctttttaccattttccaatg 264  Q
    ||||| ||||||||   |||||||||||||||| |||  |||||| |||||||||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  464770 caatgattaaggaagttaaaagtaacatgtttgtattgatttcaataacattttaacttttaaaaagttaaaattatcatttttttaccatttttcaatg 464869  T
Q  265 ctatctttctatttt 279  Q
     ||| ||||||||||    
T  464870 ttatatttctatttt 464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 44173099 - 44173207
Alignment:
Q  170 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 269  Q
    |||||| ||| |||||| ||| ||||||| ||| |||||||||||||||||| ||||||||| |||||||||||| |||| | |||||| |||||||||     
T  44173099 ggttaaagaagccaaaa-taatatgtttgtattggtttcaacaacattttaatttttaaaaaattaaatttatcatttttcatcatttttcaatgctata 44173197  T
Q  270 tttctatttt 279  Q
    ||||||||||    
T  44173198 tttctatttt 44173207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 15004905 - 15004985
Alignment:
Q  169 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 249  Q
    ||||||| |||  |||||||| |||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  15004905 tggttaaagaagtcaaaagtatcatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcactttt 15004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 297
Target Start/End: Original strand, 2239562 - 2239689
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    |||||| | ||||||||||  || |||| ||| | |||||||| ||||||||||||||||||||||||| |||| ||||||||||||| || ||| || |    
T  2239562 gttaagaataccaaaagtagtatatttgtattggattcaacaatattttaacttttaaaaagttaaattcatcattttttaccatttttcattgcaatat 2239661  T
Q  271 ttctat-tttatccccttatccaatgtc 297  Q
    |||||| ||||||| |||| ||||||||    
T  2239662 ttctatctttatcctcttaaccaatgtc 2239689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 323
Target Start/End: Complemental strand, 13998013 - 13997880
Alignment:
Q  191 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 289  Q
    |||||||| |||  ||||||||| ||||||| |||||||||||||||||||||| |||| || ||||| ||||||||| |||||| |||||| |||||||    
T  13998013 catgtttgtattgatttcaacaatattttaatttttaaaaagttaaatttatcatttttcacaatttttcaatgctatatttctatttttattcccttat 13997914  T
Q  290 ccaatgtcacaagggcaatgattggcattctcta 323  Q
    | |||  | |||  |||||| || ||||||||||    
T  13997913 ctaattcctcaaaagcaatggttagcattctcta 13997880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 34334290 - 34334182
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    ||||||||||| ||||||| |||||||| ||| | |||||||| ||||||| || ||||||||| ||||| ||| |||||||||||||| ||| | || |    
T  34334290 gttaaggaaactaaaagtagcatgtttgtattggattcaacaatattttaatttgtaaaaagtttaatttgtcattttttaccattttcaaatacaatat 34334191  T
Q  271 ttctatttt 279  Q
    |||||||||    
T  34334190 ttctatttt 34334182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 11659233 - 11659334
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||||||||||||||| |  || ||| ||||   |||||||| ||||||| |||||||||||||||||  |||||||| || ||||| ||    
T  11659233 agggcaatggttaaggaaaccaaaagcagtatatttacattgaattcaacaatattttaatttttaaaaagttaaattcttcacttttcactatttttca 11659332  T
Q  262 at 263  Q
    ||    
T  11659333 at 11659334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 34220740 - 34220639
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaaggg 304  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||| |||| || ||||||| |  |||||| |||||||| |||| ||||||||  |||||    
T  34220740 ttcaacaatattttaacttttaaaaacttaaattcatcacttttcaccacttcccaatgcaagatttctatttttatcctcttaaccaatgtcttaaggg 34220641  T
Q  305 ca 306  Q
    ||    
T  34220640 ca 34220639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 747585 - 747528
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||  ||||||||||||||||||||||| |||||||||| || ||||||||||    
T  747585 ttcaacaattttttaacttttaaaaagttaaatctatcacttttcactattttccaat 747528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 33848957 - 33849034
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatt 239  Q
    ||||||||||||||||||||||||||||| || |||  ||||  ||||||||   ||| |||||||||||||||||||    
T  33848957 agggcaatggttaaggaaaccaaaagtaatatatttatattaaattcaacaatggtttgacttttaaaaagttaaatt 33849034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 41890255 - 41890182
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 229  Q
    ||||| |||||| | |||||||||||||||||||  | ||||||||| | |||||||| |||||||||||||||    
T  41890255 gccctaagggcatttgttaaggaaaccaaaagtagtaggtttgcattggattcaacaatattttaacttttaaa 41890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 2136401 - 2136524
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| |||||| | |||||||||||||||| ||  | ||||| |||   |||||||| ||||| |||||| |||||| |||||   ||||||| | |||    
T  2136401 gcccttagggcacttgttaaggaaaccaaaattagtaggtttgtattgtattcaacaatattttcacttttcaaaagtcaaattctccacttttcatcat 2136500  T
Q  256 tttccaatgctatctttctatttt 279  Q
    |||||||||| || ||||||||||    
T  2136501 tttccaatgcaatatttctatttt 2136524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 29260257 - 29260167
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||||||||||||| | | | ||| |||||   ||||||||  ||||||||||| |||||| |||| |||||||||| |||||||||||    
T  29260257 gttaaggaaaccaaaaatgataagttcgcattgaattcaacaattttttaactttttaaaagtcaaatctatcacttttcaccattttcca 29260167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 3454791 - 3454743
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  3454791 ttcaacaatatttta-cttttaaaaagttaaagttatcactttttaccat 3454743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 10900344 - 10900271
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||| || ||||||||||||||||| | ||||| ||||||||||| |||||| |||||  || ||||||||||    
T  10900344 ttcaataatattttaacttttaaaaaataaaattcatcactttttatcatttttcaatgtgatatttctatttt 10900271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 308
Target Start/End: Complemental strand, 43140419 - 43140314
Alignment:
Q  204 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 302  Q
    ||||||| || ||||| | |||||||||||||||||||||| ||||   |||||| ||||| ||| ||| || |||||||| |||||||||| || ||||    
T  43140419 gtttcaataatatttttaattttaaaaagttaaatttatcatttttcgtcatttttcaatgttatatttttatttttatcctcttatccaatatctcaag 43140320  T
Q  303 ggcaat 308  Q
    | ||||    
T  43140319 gacaat 43140314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 11445364 - 11445313
Alignment:
Q  227 aaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 278  Q
    |||||||||||||||||| |||| |||||||| ||||| ||| |||||||||    
T  11445364 aaaaagttaaatttatcatttttcaccatttttcaatgttatatttctattt 11445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 34512671 - 34512714
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    |||||||||||||||||| |||| |||||||||| |||||||||    
T  34512671 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 34512714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 8327004 - 8327038
Alignment:
Q  215 attttaacttttaaaaagttaaatttatcactttt 249  Q
    |||||||||||||||||||||||||| ||||||||    
T  8327004 attttaacttttaaaaagttaaatttttcactttt 8327038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 30831636 - 30831706
Alignment:
Q  209 aacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||| ||||| ||||||||||||||||||| |||| ||||||  |||||  ||||| || ||||||||||    
T  30831636 aacaatatttttacttttaaaaagttaaattcatcattttttataattttttaatgcaatatttctatttt 30831706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 2805373 - 2805441
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaactttt--aaaaagttaaatttatcactttt 249  Q
    |||||||  ||||||| ||||| |||||||| ||||| ||||||  ||||||||||||| |||||||||    
T  2805373 aaaagtagtatgtttgtattagattcaacaatattttgacttttaaaaaaagttaaattcatcactttt 2805441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 37230253 - 37230306
Alignment:
Q  224 tttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatt 277  Q
    ||||||||||||| |||||||||||| |||||||| |||| | || ||||||||    
T  37230253 tttaaaaagttaagtttatcacttttcaccatttttcaatacaatatttctatt 37230306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 6e-41; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 169 - 321
Target Start/End: Complemental strand, 19389441 - 19389288
Alignment:
Q  169 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 268  Q
    |||||||||||| |||||||| ||||||||||||  ||||||| | ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||    
T  19389441 tggttaaggaaatcaaaagtagcatgtttgcattgttttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaatactat 19389342  T
Q  269 ctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
     |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  19389341 atttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 19389288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 4989909 - 4990064
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||   |||| || ||||||||||||||||||||| |||| || ||||||||||    
T  4989909 ggcaatggttaaggaagtcaaaagtagcatgtttgcattggtttcaaca---ttttgacatttaaaaagttaaatttatcatttttcactattttccaat 4990005  T
Q  264 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||| |||||| ||||||||||||||||||||  |||||| |||||||| ||||||||    
T  4990006 gctatatttctatttttatccccttatccaatgctacaaggacaatgattagcattctc 4990064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 165 - 294
Target Start/End: Original strand, 10694781 - 10694911
Alignment:
Q  165 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 264  Q
    ||||||||||||||| ||||||||| ||| ||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||     
T  10694781 gcaatggttaaggaagccaaaagtatcatatttgcattgatttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttttaaata 10694880  T
Q  265 ctatctttctatttt-atccccttatccaat 294  Q
    |||| ||| |||||| |||||||||||||||    
T  10694881 ctatatttttattttaatccccttatccaat 10694911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 18068952 - 18069062
Alignment:
Q  181 ccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttt 279  Q
    |||||||||  |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  18068952 ccaaaagtataatgtttgcattagtttcaacaacattttgacctttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttt 18069051  T
Q  280 atccccttatc 290  Q
    |||||||||||    
T  18069052 atccccttatc 18069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 8018733 - 8018866
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgttt-gcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||||||||||| |||||||||  |||||| |||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||    
T  8018733 ggcaatggttaaggaagccaaaagtagtatgttttgcattagttttaacaacattttgatttttaaaaagttaaatttatcacttttcaccattttccaa 8018832  T
Q  263 tgctatctttcta-ttttatccccttatccaatg 295  Q
    |  ||| |||||| ||||||||||||||||||||    
T  8018833 tattatatttctatttttatccccttatccaatg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 156 - 294
Target Start/End: Original strand, 26672755 - 26672894
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||||||||||||||||||||||| ||||| ||  ||||||  ||| |||||||||||||||| ||||||||||| |||||||||||  |||||| |||    
T  26672755 gccctgagggcaatggttaaggaaatcaaaaatacgatgtttatattggtttcaacaacattttgacttttaaaaaattaaatttatccttttttatcat 26672854  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaat 294  Q
    ||||||||||||| |||||| ||||||||| |||||||||    
T  26672855 tttccaatgctatatttctatttttatccctttatccaat 26672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 21016185 - 21016035
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 271  Q
    ||||||||  |||||||| |||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||| ||| ||    
T  21016185 ttaaggaagtcaaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatctatcacttttaaccatttttcaatgttatatt 21016086  T
Q  272 tcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||| |||||||||||||||||| | | ||| ||||||| || ||||||||    
T  21016085 tctatttttatccccttatccaaagcctcaaaggcaatggttagcattctc 21016035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 170 - 323
Target Start/End: Original strand, 45337983 - 45338137
Alignment:
Q  170 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 269  Q
    ||||||||||||||||||||  ||||||||||| || |||| |||||||| | |||||||||||||||||||||| |||| |||||||| ||||| |||     
T  45337983 ggttaaggaaaccaaaagtagtatgtttgcattggtctcaataacattttgatttttaaaaagttaaatttatcatttttcaccatttttcaatgttata 45338082  T
Q  270 tttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctcta 323  Q
    |||||| |||||||||||||||||||| |  |||| ||||| || ||||||||||    
T  45338083 tttctatttttatccccttatccaatgcccaaaggacaatggttagcattctcta 45338137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 14855513 - 14855394
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| || |||||  ||| |||| |    
T  14855513 gttaaggaaaccaaaagtagcatgtttgcattagttttaacaacattttaacttttaaaatgttaaatttatctcttttcactattttttaatactatat 14855414  T
Q  271 ttcta-ttttatccccttat 289  Q
    ||||| ||||||||||||||    
T  14855413 ttctatttttatccccttat 14855394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 26195490 - 26195383
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 281  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||| ||||||    
T  26195490 aaaagtagcatgtttgtattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttat 26195391  T
Q  282 ccccttat 289  Q
    ||||||||    
T  26195390 ccccttat 26195383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 25249450 - 25249345
Alignment:
Q  191 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 289  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||| || ||||| ||||||||    
T  25249450 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttttatttttacccccttat 25249351  T
Q  290 ccaatg 295  Q
    ||||||    
T  25249350 ccaatg 25249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 6433509 - 6433632
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| || |||||||||||||||  ||||||||  || |||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  6433509 gccctcagagcaatggttaaggaagacaaaagtagtatctttgcattggttttaacaatattttaacttttaaaaagttaaatttataactttttaccat 6433608  T
Q  256 tttccaatgctatctttctatttt 279  Q
    ||| ||||||||| ||| ||||||    
T  6433609 ttttcaatgctatatttttatttt 6433632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 185 - 279
Target Start/End: Original strand, 6939152 - 6939246
Alignment:
Q  185 aagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| | |||||||| ||||| ||| ||||||||||    
T  6939152 aagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttgtcaccatttttcaatgttatatttctatttt 6939246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 21016234 - 21016362
Alignment:
Q  191 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 289  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||  ||| |||||| ||||||||||||||    
T  21016234 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaatctatcacttttcaccatttttcaatattatatttctatttttatccccttat 21016333  T
Q  290 ccaatgtcacaagggcaatgattggcatt 318  Q
    |||| | | ||| ||||||| || |||||    
T  21016334 ccaaagccccaaaggcaatggttagcatt 21016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 164 - 294
Target Start/End: Original strand, 37433239 - 37433369
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||| ||||||||   |||||||  ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  37433239 ggcaatgattaaggaagttaaaagtagtatgtttgcattggtttcaacaacattttaac-tttaaaaagttaaatttatcacttttcatcatttttcaat 37433337  T
Q  264 gctatctttcta-ttttatccccttatccaat 294  Q
    | ||| | || | |||||||||||||||||||    
T  37433338 gttatatgtcgatttttatccccttatccaat 37433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 33741637 - 33741525
Alignment:
Q  135 tcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagtt 234  Q
    |||||||||||||||| ||  ||||| || |||||| |||||  |  |||||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  33741637 tcttgctaaccattgttct--gccctcagtgcaatgattaagagagtcaaaagtaacatatttgcattggtttcaacaatattttaacttttaaaaagtt 33741540  T
Q  235 aaatttatcactttt 249  Q
    |||||||||| ||||    
T  33741539 aaatttatcattttt 33741525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 166 - 295
Target Start/End: Original strand, 44874308 - 44874430
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||||||  |||||||| |||||||||||| |||||||||||        ||||||||| ||||||||||||||||| |||||||| |||||     
T  44874308 caatggttaaggaagacaaaagtagcatgtttgcattggtttcaacaac--------ttttaaaaatttaaatttatcacttttcaccatttttcaatgt 44874399  T
Q  266 tatctttcta-ttttatccccttatccaatg 295  Q
    ||| ||| || ||||||||||||||||||||    
T  44874400 tatatttatatttttatccccttatccaatg 44874430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 34714048 - 34713953
Alignment:
Q  173 taaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 268  Q
    |||||||  |||||||| |||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||  |||||||| |||| ||||    
T  34714048 taaggaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagtgaaatttatcactttgcaccatttttcaatactat 34713953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 321
Target Start/End: Complemental strand, 5129545 - 5129434
Alignment:
Q  211 caacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 309  Q
    ||||||||| ||||||||||| ||||||||||||||||| | |||||| ||||||||| |||| | ||||||||||||||| ||||    ||||||||||    
T  5129545 caacattttgacttttaaaaaattaaatttatcacttttcatcatttttcaatgctatatttcaatttttatccccttatcaaatgctctaagggcaatg 5129446  T
Q  310 attggcattctc 321  Q
     || ||||||||    
T  5129445 gttagcattctc 5129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 26892795 - 26892874
Alignment:
Q  200 attagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||| ||||  ||| ||||||||||    
T  26892795 attagtttcaataatattttaacttttaaaaagttaaatttatcattttttacaatttttcaatattatatttctatttt 26892874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 3174436 - 3174563
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaac----attttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 266  Q
    ||||||||| ||||||||| |||||||| ||| |||||||||||    ||||| ||||||||||||| |||||||| | |||| |||||||||||||       
T  3174436 gttaaggaagccaaaagtagcatgtttgtattggtttcaacaacatttattttgacttttaaaaagtcaaatttataatttttcaccattttccaatata 3174535  T
Q  267 atctttcta-ttttatccccttatccaa 293  Q
    || |||||| ||||||||||| ||||||    
T  3174536 atatttctatttttatcccctcatccaa 3174563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 7532767 - 7532890
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 270  Q
    |||||||||||||||||||  | ||||| ||| | |||||||| |||  ||||||||||||  |||||| ||||||||| ||||||||||||| | || |    
T  7532767 gttaaggaaaccaaaagtagtaggtttgaattggattcaacaatatt--aacttttaaaaacctaaattcatcacttttcaccattttccaatacaatat 7532864  T
Q  271 ttcta-ttttatccccttatccaatg 295  Q
    ||||| ||||||||||||| ||||||    
T  7532865 ttctatttttatccccttaaccaatg 7532890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 20212518 - 20212433
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 256  Q
    ||||||||||||||||||| || |||| |||| | |||||| | ||||||||||||||||| ||||||| ||||||||| ||||||    
T  20212518 gttaaggaaaccaaaagtagcaggtttacattggattcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 20212433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 30351583 - 30351666
Alignment:
Q  183 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcac-tttttaccattttccaatgc 265  Q
    |||||||| ||||||||||| | |||||||| ||||||||||||||||||||||| |  |||| ||||||||||||| ||||||    
T  30351583 aaaagtaatatgtttgcattggattcaacaatattttaacttttaaaaagttaaactcgtcacttttttaccatttttcaatgc 30351666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 39972290 - 39972189
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    |||||| | |||||||||||||||| ||  |||||||||||   || |||||  |||||||||||||||||| ||||| ||||||||| ||||||| |||    
T  39972290 agggcactagttaaggaaaccaaaaatagtatgtttgcattgaattgaacaattttttaacttttaaaaagtcaaattcatcacttttcaccatttccca 39972191  T
Q  262 at 263  Q
    ||    
T  39972190 at 39972189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 4308789 - 4308876
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    |||||||||||||||| ||  | ||||| ||| | |||||||  ||||||||||||| ||||||||||| |||| |||||||||||||    
T  4308789 gttaaggaaaccaaaaatagtaggtttgtattggattcaacactattttaacttttataaagttaaattcatcattttttaccatttt 4308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 7444258 - 7444317
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaa 230  Q
    |||||||||||||||||||  | ||||||||||| |||||||| ||||||||||||||||    
T  7444258 gttaaggaaaccaaaagtagtaggtttgcattagattcaacaatattttaacttttaaaa 7444317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 38869969 - 38870092
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| || |||||||| ||||||||||||||||  || ||| ||||   |||| ||| ||||| |||||||||| ||| ||||  |||||||| | |||    
T  38869969 gccctcagagcaatggtcaaggaaaccaaaagtagtatatttacattgaattcatcaatattttgacttttaaaatgttgaattcttcacttttcatcat 38870068  T
Q  256 tttccaatgctatctttctatttt 279  Q
    |||||||||| || ||||||||||    
T  38870069 tttccaatgcaatgtttctatttt 38870092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 6396378 - 6396315
Alignment:
Q  195 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    |||| ||||| ||||||||||||||||| ||||||| |||||||| || ||| || ||||||||    
T  6396378 tttgtattagattcaacaacattttaacgtttaaaatgttaaattcattactcttcaccatttt 6396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 20169309 - 20169372
Alignment:
Q  215 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 278  Q
    ||||||||||||||||||| ||||| || | ||||||| |||||| ||||| || |||||||||    
T  20169309 attttaacttttaaaaagtcaaattcataattttttacaattttctaatgcaatatttctattt 20169372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 35974005 - 35973927
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 249  Q
    ||||| |||||||||| ||| | ||||| || |  |||||||| |||||| |||||||||| |||||||||||| ||||    
T  35974005 gttaatgaaaccaaaaataataagtttgtatgaaattcaacaatattttatcttttaaaaaattaaatttatcattttt 35973927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 17320045 - 17320000
Alignment:
Q  209 aacaacattttaacttttaaaaagttaaatttatcactttttacca 254  Q
    ||||| ||||||||||||||||||||||||| ||| ||||| ||||    
T  17320045 aacaatattttaacttttaaaaagttaaattcatctcttttcacca 17320000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 39491891 - 39491858
Alignment:
Q  216 ttttaacttttaaaaagttaaatttatcactttt 249  Q
    |||||||||||||||||||||||| |||||||||    
T  39491891 ttttaacttttaaaaagttaaattcatcactttt 39491858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 5300203 - 5300263
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaa 231  Q
    |||||||||||||||||||  | |||||||||   |||||||| ||||| |||||||||||    
T  5300203 gttaaggaaaccaaaagtagtaagtttgcattgaattcaacaatattttgacttttaaaaa 5300263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 25381796 - 25381708
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 259  Q
    ||||||||||| |||| ||| ||||||| ||| | | |||||| ||||||||||| ||||| | ||||| |||| ||||| | ||||||    
T  25381796 gttaaggaaactaaaaataaaatgtttgaattggatacaacaatattttaactttaaaaaaataaaattaatcatttttttctattttc 25381708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 16908 - 16750
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||| |||||||| |||| || ||||| |||    
T  16908 gggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caa 16810  T
Q  263 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||| |||||| |||||||||||||||||||| |  | |||||||| || ||||||||    
T  16809 tgctatatttctatttttatccccttatccaatgccctatgggcaatggttagcattctc 16750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 27076 - 26918
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||| |||||||| |||| || ||||| |||    
T  27076 gggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caa 26978  T
Q  263 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||| |||||| |||||||||||||||||||| |  | |||||||| || ||||||||    
T  26977 tgctatatttctatttttatccccttatccaatgccctatgggcaatggttagcattctc 26918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 37242 - 37084
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||| |||||||| |||| || ||||| |||    
T  37242 gggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caa 37144  T
Q  263 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||| |||||| |||||||||||||||||||| |  | |||||||| || ||||||||    
T  37143 tgctatatttctatttttatccccttatccaatgccctatgggcaatggttagcattctc 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 9e-37; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 165 - 322
Target Start/End: Complemental strand, 7274349 - 7274191
Alignment:
Q  165 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 264  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||    
T  7274349 gcaatgattaaggaaaccaaaagtaacatgtttgtattgatttcaacaacattttaacttttaaaatgttaaatttatcacttttcgtcattttccaatg 7274250  T
Q  265 ctatctttctat-tttatccccttatccaatgtcacaagggcaatgattggcattctct 322  Q
     ||| ||||||| ||||| ||||| ||||||||| ||| | ||||| ||  ||||||||    
T  7274249 ttatatttctatatttattcccttgtccaatgtcccaaagacaatggttaacattctct 7274191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 130 - 320
Target Start/End: Original strand, 10855379 - 10855562
Alignment:
Q  130 ttgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 229  Q
    ||||||||||||||||||||||||       ||||||||||||||| |||| |||||||| ||| |||||||  |||||||||||||||| |||||||||    
T  10855379 ttgggtcttgctaaccattgtcct-------gagggcaatggttaaagaaatcaaaagtagcatatttgcatg-gtttcaacaacattttgacttttaaa 10855470  T
Q  230 aagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattct 320  Q
    |||||||||||||||||||| | |||||| ||||  ||| |||||| ||||||||||||||| |||| | ||||| ||||| || |||||||    
T  10855471 aagttaaatttatcacttttcatcatttttcaatattatatttctatttttatccccttatcaaatgccccaaggacaatggttagcattct 10855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 163 - 279
Target Start/End: Complemental strand, 7875318 - 7875202
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||| |||||||| ||||||||| ||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  7875318 gggcaatgattaaggaagccaaaagtagcatgtctgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttccaa 7875219  T
Q  263 tgctatctttctatttt 279  Q
    |||||| ||||||||||    
T  7875218 tgctatatttctatttt 7875202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 12191466 - 12191598
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    ||||||||||||||||  |||||||| |||||||| |||  ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||    
T  12191466 ggcaatggttaaggaaggcaaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccatttaccaat 12191565  T
Q  264 gctatctttcta-ttttatccccttatccaatg 295  Q
    ||||| |||||| |||||||| |||||||||||    
T  12191566 gctatatttctatttttatccacttatccaatg 12191598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 162 - 308
Target Start/End: Original strand, 5578245 - 5578392
Alignment:
Q  162 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 261  Q
    ||||||||||||||||||  |||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||| || | |  ||||| ||    
T  5578245 agggcaatggttaaggaagtcaaaagtagcatgtttgcatttgtttcaacaatattttgacttttaaaaagttaaatttatcaattctcattatttttca 5578344  T
Q  262 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaat 308  Q
    ||||||| |||||| ||||||||||| |||||||| | ||||||||||    
T  5578345 atgctatatttctatttttatcccctcatccaatgcctcaagggcaat 5578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 156 - 321
Target Start/End: Complemental strand, 26572221 - 26572060
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| ||||||||||||||||||  |||||||| |||||||||||| |||| ||||| ||||||||||||||||  ||||||||||||||||||| |||    
T  26572221 gccctcagggcaatggttaaggaagtcaaaagtagcatgtttgcattggttttaacaatattttaacttttaaaatattaaatttatcactttttatcat 26572122  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    ||||     |||| |||||| |||||||||||||||||||| | ||||| ||||| || ||||||||    
T  26572121 tttc-----ctatatttctatttttatccccttatccaatgccccaaggacaatggttagcattctc 26572060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 163 - 279
Target Start/End: Complemental strand, 7880564 - 7880448
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    |||||||| |||||||| ||||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||| ||    
T  7880564 gggcaatgattaaggaagccaaaagtagcatgtctgtattagtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttctaa 7880465  T
Q  263 tgctatctttctatttt 279  Q
    |||||| ||||||||||    
T  7880464 tgctatatttctatttt 7880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 156 - 322
Target Start/End: Complemental strand, 16437726 - 16437567
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||| |||||||||||||||||        |||| |||||    
T  16437726 gccctgagggcaatggttaaggaaaccaacagtagcatgtttgcattggtttcaacaatatttttacttttaaaaagttaaa--------ttttcaccat 16437635  T
Q  256 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctct 322  Q
    ||||||||| ||| |||||| |||||||| ||||||||||| |  ||| |||||| || |||||||||    
T  16437634 tttccaatgttatatttctatttttatccacttatccaatgccttaagagcaatggttagcattctct 16437567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 6866915 - 6867020
Alignment:
Q  191 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 289  Q
    ||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||| |||||||| ||| || ||||||||||||||    
T  6866915 catgtttgcattgatttcaacaacattttgacttttaaaaggttaaatttatcacttttcaccattttcaaatgctatatttttatttttatccccttat 6867014  T
Q  290 ccaatg 295  Q
    ||||||    
T  6867015 ccaatg 6867020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 8324248 - 8324125
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| ||| ||||||||||||||   |||| ||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||| |||| || ||    
T  8324248 gccctcaggacaatggttaaggaaggtaaaaataacatgtttatattggtttcaacaacattttaatttttaaaaagttaaatttatcatttttcacaat 8324149  T
Q  256 tttccaatgctatctttctatttt 279  Q
    ||  ||||||||| ||||||||||    
T  8324148 ttctcaatgctatgtttctatttt 8324125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 31220455 - 31220369
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    ||||||||||||||||||  |||||||||||   ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  31220455 ttaaggaaaccaaaagtagtatgtttgcattttattcaataacattttaacttttaaaaagttaaattcatcactttttaccatttt 31220369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 32786041 - 32786110
Alignment:
Q  163 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaag 232  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  32786041 gggcaatggttaaggaaaccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaag 32786110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 29692427 - 29692319
Alignment:
Q  214 cattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgatt 312  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||| |||| |||| |||||| ||||||||  |||||||||| | ||||||||||||||    
T  29692427 cattttgactcttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaagggcaatgatt 29692328  T
Q  313 ggcattctc 321  Q
     ||||||||    
T  29692327 agcattctc 29692319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 21186145 - 21186059
Alignment:
Q  172 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 258  Q
    ||||||||| |||||||| ||  |||||||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  21186145 ttaaggaaatcaaaagtagcaattttgcattagattcaataatattttaacttttaaaaagttaaattcatcactttttaccatttt 21186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 12175535 - 12175647
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 265  Q
    ||||||||||||||   |||||||  ||||||||||| |||| || ||| ||||||||||||||||||||||||||||| |||||| |||||| |||| |    
T  12175535 caatggttaaggaacttaaaagtagtatgtttgcattggttttaataac-ttttaacttttaaaaagttaaatttatcagtttttatcatttttcaatac 12175633  T
Q  266 tatctttctatttt 279  Q
    ||| ||| ||||||    
T  12175634 tatatttatatttt 12175647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 32786259 - 32786346
Alignment:
Q  234 taaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagggcaatgattggcattctc 321  Q
    |||||||||| ||||| |||||||||||||| ||| ||||||||||   ||||||||||||  | ||||||||||| || ||||||||    
T  32786259 taaatttatctcttttcaccattttccaatgttatatttctatttttatcccttatccaataccccaagggcaatggttagcattctc 32786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 34780112 - 34780023
Alignment:
Q  166 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||||||||||||| ||||||||  || ||| ||||   ||||||||  ||||||||||||||||||||||||  |||||||| |||||    
T  34780112 caatggttaaggaaatcaaaagtagtatatttacattgaattcaacaatgttttaacttttaaaaagttaaattcttcacttttcaccat 34780023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 28014638 - 28014740
Alignment:
Q  194 gtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttct-attttatccccttatcca 292  Q
    ||||||||| | |||||||| ||||||||||||||||||| ||| | |||| |||| ||||||| ||||| | || ||||| |||||| || |||| |||    
T  28014638 gtttgcattggattcaacaatattttaacttttaaaaagtcaaactcatcatttttcaccatttcccaatacaatatttctaattttaccctcttaacca 28014737  T
Q  293 atg 295  Q
    |||    
T  28014738 atg 28014740  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 1947424 - 1947476
Alignment:
Q  210 acaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 262  Q
    ||||| |||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  1947424 acaactttttgacttttagaaagttgaatttaacactttttaccattttccaa 1947476  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 12226475 - 12226352
Alignment:
Q  156 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 255  Q
    ||||| ||| ||||||||||||||||||||| ||  || ||| ||||   ||||||||  |||| ||||| |||||||||||||  |||||||| | |||    
T  12226475 gccctcaggacaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgtttttactttcaaaaagttaaattcttcacttttaatcat 12226376  T
Q  256 tttccaatgctatctttctatttt 279  Q
    ||  |||| | || ||||||||||    
T  12226375 ttctcaatacaatgtttctatttt 12226352  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 19645941 - 19645995
Alignment:
Q  128 ttttgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagta 189  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||| |||||||    
T  19645941 ttttgggtcttgctaaccattgtcctc-------agggcaatggttaaggaaactaaaagta 19645995  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 29964274 - 29964349
Alignment:
Q  164 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatt 239  Q
    |||||||||||||||| |||||| ||| || ||| ||||   ||||||||  |||| |||||||||||||||||||    
T  29964274 ggcaatggttaaggaacccaaaaataatatatttacattgaattcaacaatgttttgacttttaaaaagttaaatt 29964349  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 5029546 - 5029489
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||  ||||||||||||||||||||||||| |  || |||||||||||| ||||    
T  5029546 ttcaacactattttaacttttaaaaagttaaattcacaacattttaccatttttcaat 5029489  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 27127601 - 27127528
Alignment:
Q  206 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 279  Q
    |||||||| || || ||||||||||||||||||| |||| |||| |||||||  |||| | || ||||||||||    
T  27127601 ttcaacaatatcttgacttttaaaaagttaaattcatcatttttcaccatttctcaatacaatatttctatttt 27127528  T

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Target: scaffold0002 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 171 - 268
Target Start/End: Complemental strand, 392261 - 392164
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 268  Q
    ||||||||| | ||||||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  392261 gttaaggaagcgaaaagtagcatgtttgcatcggtttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttttcaatgctat 392164  T

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Target: scaffold0809 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 4764 - 4705
Alignment:
Q  182 caaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaattta 241  Q
    |||||||| ||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  4764 caaaagtagcatgtttgcattaatttcaacaacatattgacttttaaaaagttaaattta 4705  T

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Target: scaffold0809; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 4337 - 4249
Alignment:
Q  233 ttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattct 320  Q
    ||||||||||||||||| || ||||||||||||||| ||| || |||||||||  ||||||||||| |||  ||||||||| |||||||    
T  4337 ttaaatttatcacttttcacaattttccaatgctatatttttatttttatccctctatccaatgtcccaaaagcaatgattagcattct 4249  T

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Target: scaffold0144 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 39553 - 39675
Alignment:
Q  155 agccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttacca 254  Q
    |||||| ||||||||||||||||||||||||||||  || ||| ||||   |||||||  || || |||||||||||||||||||  ||| |||| || |    
T  39553 agccctcagggcaatggttaaggaaaccaaaagtagtatatttacattgaattcaaca--atgttgacttttaaaaagttaaattcttcagttttcacta 39650  T
Q  255 ttttccaatgctatctttctatttt 279  Q
    ||||||||| | || ||||||||||    
T  39651 ttttccaatacaatgtttctatttt 39675  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 37507 - 37430
Alignment:
Q  171 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 249  Q
    |||||||||| ||||||||  ||||| ||||| | ||||| |||||||| |||||| |||||||||||| |||| ||||    
T  37507 gttaaggaaatcaaaagtagaatgtt-gcattggattcaataacattttgacttttgaaaagttaaattcatcattttt 37430  T

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Target: scaffold2122 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold2122
Description:

Target: scaffold2122; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 711 - 655
Alignment:
Q  207 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 263  Q
    |||||||  ||||||||||||||||||| |||| |  |||||| |||||||||||||    
T  711 tcaacaattttttaacttttaaaaagttgaattcacaacttttcaccattttccaat 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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