View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7910_high_3 (Length: 235)
Name: NF7910_high_3
Description: NF7910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7910_high_3 |
 | |
|
| [»] scaffold0066 (1 HSPs) |
| | |
|
| [»] scaffold0032 (1 HSPs) |
| | |
|
| [»] scaffold0004 (3 HSPs) |
| | |
|
| [»] scaffold0334 (1 HSPs) |
| | |
|
| [»] scaffold0789 (1 HSPs) |
| | |
|
| [»] scaffold0084 (1 HSPs) |
| | |
|
| [»] scaffold0120 (2 HSPs) |
| | |
|
| [»] scaffold0435 (1 HSPs) |
| | |
|
| [»] scaffold0183 (1 HSPs) |
| | |
|
| [»] scaffold0315 (1 HSPs) |
| | |
|
| [»] scaffold0175 (1 HSPs) |
| | |
|
| [»] scaffold0324 (1 HSPs) |
| | |
|
| [»] scaffold0261 (1 HSPs) |
| | |
|
| [»] scaffold0227 (1 HSPs) |
| | |
|
| [»] scaffold0080 (1 HSPs) |
| | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 24848721 - 24848935
Alignment:
| Q |
11 |
catcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatc |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24848721 |
catcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatctggtcaatcactactcaggcgaattaccaggtgttgaatc |
24848820 |
T |
|
| Q |
111 |
caacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgctca |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24848821 |
caacctagaaaaagcctctagagttattcctgatgaaattactttaaaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgctca |
24848920 |
T |
|
| Q |
211 |
gatgtctctgctcct |
225 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
24848921 |
gatgtctctgttcct |
24848935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 21367376 - 21367167
Alignment:
| Q |
9 |
gacatcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaa |
108 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | ||||||| ||| || || || |||||| |||| | |||||||||||| ||| ||||||| ||||| |
|
|
| T |
21367376 |
gacatcatcatctcatcctacttcaactacctatacttcaggaccctctgtcttagagaatctggttagtcactactcaggtgaactaccaggcgttgag |
21367277 |
T |
|
| Q |
109 |
tccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgct |
208 |
Q |
| |
|
|||| ||| ||||||||| ||| | || |||| || |||||||||||||| |||||||| |||||||| || ||| ||| |||||||||| |
|
|
| T |
21367276 |
cccaatttag--aaagcctctgaagtagcttctagtgaagttgctttagaaagccccgaacaacaagcaccaaacgtatgtatggccttaacaacctgcc |
21367179 |
T |
|
| Q |
209 |
cagatgtctctg |
220 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
21367178 |
cagaagtctctg |
21367167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 24379154 - 24378967
Alignment:
| Q |
12 |
atcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatcc |
111 |
Q |
| |
|
|||| |||||||||||| ||| |||| || || ||| |||| |||||||||| |||| |||||||||||| || | | |||||||||||| ||| |
|
|
| T |
24379154 |
atcaccatctcatcccaactcatctacccatacatcaaaaccttcagttttggggaatctggtcaatcactccttaagtgaattaccaggttgtgagcta |
24379055 |
T |
|
| Q |
112 |
aacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaa |
199 |
Q |
| |
|
|| ||||| |||| ||||| ||| | || |||| |||||||||||||||||||||||||| |||| ||| |||||||| |||||| |
|
|
| T |
24379054 |
aatctagagaaagtctctaaagtagcttctagtgaagttactttagaaagcccccaacaacaagcacctaacgtacaaatggcctcaa |
24378967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 23236846 - 23236780
Alignment:
| Q |
140 |
ctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctg |
206 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
23236846 |
ctgatgaagttaccttagaaagcccccaacatcaagcacgaaacttacaaatggcctcaacaacctg |
23236780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 18939872 - 18939822
Alignment:
| Q |
142 |
gatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatg |
192 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
18939872 |
gatgaagttgctttagaaagcccccaacaacaaacaccaaacacacaaatg |
18939822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 21693639 - 21693459
Alignment:
| Q |
11 |
catcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatc |
110 |
Q |
| |
|
|||| ||||||||||||||||||| || || ||||||||||| || |||||||||||| |||||| ||||||||| || ||||||||||||||||| | |
|
|
| T |
21693639 |
catcgtcatctcatcccacttcaatcacccatacttcagaaccgtctgttttggagaatctggtcagtcactactctggtgaattaccaggtgttgagcc |
21693540 |
T |
|
| Q |
111 |
caacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaat |
191 |
Q |
| |
|
||| ||||||||||| |||||||||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
21693539 |
caatctagaaaaagcttctagagttatttctgaggaaattactgtagaaagcccccaacaacaagcaccaaacttacaaat |
21693459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 13650856 - 13650729
Alignment:
| Q |
78 |
tcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaaca |
177 |
Q |
| |
|
|||||||||||| ||| ||||||||||| | || | |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| || |
|
|
| T |
13650856 |
tcactactcaggtgaactaccaggtgttaagccctatctagaaaaagcctctaaagtagctcctgatgaagttactttagaaagcccccaacaacaagca |
13650757 |
T |
|
| Q |
178 |
ccaaacttacaaatgacctcaacaacct |
205 |
Q |
| |
|
||||| ||||||| ||||||| |||| |
|
|
| T |
13650756 |
ccaaatgcacaaatggcctcaactacct |
13650729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 13030220 - 13030356
Alignment:
| Q |
70 |
ttggtcaatcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaac |
169 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||| | | ||||||||||||||| ||| | || |||| |||||||||||| |||||||| |
|
|
| T |
13030220 |
ttggtcaatcactactcaggtgaattaccaggttgtgagccttatctagaaaaagcctctgaagtagcttctagtgaagttactttagaaaacccccaac |
13030319 |
T |
|
| Q |
170 |
aacaaacaccaaacttacaaatgacctcaacaacctg |
206 |
Q |
| |
|
||||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
13030320 |
aacaagcaccaaacttacaaatggcctcatcaacctg |
13030356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 13136115 - 13136242
Alignment:
| Q |
78 |
tcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaaca |
177 |
Q |
| |
|
|||||||||| | ||| ||||||||||||| | | ||||||| ||||||| ||| | ||||| || |||||||||||||||||||||||||| || |
|
|
| T |
13136115 |
tcactactcaagtgaactaccaggtgttgagccatatctagaaagagcctctgaagtagcttctgattaagttactttagaaagcccccaacaacaagca |
13136214 |
T |
|
| Q |
178 |
ccaaacttacaaatgacctcaacaacct |
205 |
Q |
| |
|
||||||||||| ||| ||||| |||||| |
|
|
| T |
13136215 |
ccaaacttacagatggcctcatcaacct |
13136242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 22576124 - 22576176
Alignment:
| Q |
140 |
ctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatg |
192 |
Q |
| |
|
|||||||| || ||||||||| ||||||||||||| ||||||||| ||||||| |
|
|
| T |
22576124 |
ctgatgaagttgctttagaaaacccccaacaacaagcaccaaactcacaaatg |
22576176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 333577 - 333536
Alignment:
| Q |
140 |
ctgatgaaattactttagaaagcccccaacaacaaacaccaa |
181 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||| |||||| |
|
|
| T |
333577 |
ctgatgaagttactttagaaagcccccaacaccaatcaccaa |
333536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 15141406 - 15141212
Alignment:
| Q |
12 |
atcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatcc |
111 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||||||| ||| | |
|
|
| T |
15141406 |
atcatcatctcatcccaattcaactacccaaactttagaaccatctgttttggagaatctggtcaatcactactcaggtgaattaccaggttgtgagcct |
15141307 |
T |
|
| Q |
112 |
aacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctg |
206 |
Q |
| |
|
|| ||||||| ||||||| ||| | ||| |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
15141306 |
aatctagaaagagcctctgaagtagcttctggtgaagttactttagaaagcccccaacaacaagcaccaaacttacaaatggcctcaacaacctg |
15141212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 13001540 - 13001728
Alignment:
| Q |
11 |
catcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatc |
110 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||| || ||||| ||||| || | ||| |||||||| ||| ||||||||||| ||||| | |
|
|
| T |
13001540 |
catcatcatctcatcccaaaccaactacccaaacttctgatccatctgttttcgatgaactggataatcactattcatatgaattaccaggatttgaacc |
13001639 |
T |
|
| Q |
111 |
caacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaa |
199 |
Q |
| |
|
|| ||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
13001640 |
taatctagaaaaagcctctgaagtagattctgatgaagttactttagaaagcccccaacaacatgcaccaaacttacaaatggcctcaa |
13001728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 19619227 - 19619312
Alignment:
| Q |
140 |
ctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgctcagatgtctctgctcct |
225 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||| |||||| |||||| |||| |
|
|
| T |
19619227 |
ctgatgaagttactttagaaagcccccaacagcaagcaccaaacctacaaatagcctcaacaaccttgtcagatatctctgttcct |
19619312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 19607795 - 19607922
Alignment:
| Q |
78 |
tcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaaca |
177 |
Q |
| |
|
|||||||||||| ||| ||||||||||||| | | ||||||| ||||| | ||| | |||||||| ||||||||| |||||||||||||| | || |
|
|
| T |
19607795 |
tcactactcaggtgaactaccaggtgttgagccatatctagaaagagcctttgaagtagcttctgatgaagttactttagcaagcccccaacaaccagca |
19607894 |
T |
|
| Q |
178 |
ccaaacttacaaatgacctcaacaacct |
205 |
Q |
| |
|
|||| ||||| ||| ||||| |||||| |
|
|
| T |
19607895 |
ccaattttacagatggcctcatcaacct |
19607922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0066 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0066
Description:
Target: scaffold0066; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 58832 - 59043
Alignment:
| Q |
14 |
catcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatccaa |
113 |
Q |
| |
|
||||||||||||| |||||||| ||||||| |||| | || || || |||||| |||||| |||||||||| | |||| ||||||||||||| | || |
|
|
| T |
58832 |
catcatctcatcctacttcaacccaccaaactttagaaacttctgtcttagagaatctggtcagtcactactcatgtgaatcaccaggtgttgaacctaa |
58931 |
T |
|
| Q |
114 |
cctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgctcagat |
213 |
Q |
| |
|
|||| | ||||||| | ||| | || |||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
58932 |
cctacagaaagcctgtgaagtagcttctagtgaagttactttagaaagcccccaacaacaagcaccaaacgtacaaatggcctcaacaacctgcccagat |
59031 |
T |
|
| Q |
214 |
gtctctgctcct |
225 |
Q |
| |
|
||||||| |||| |
|
|
| T |
59032 |
gtctctgttcct |
59043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 20380400 - 20380610
Alignment:
| Q |
16 |
tcatctcatcccacttcaacta-ctcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatccaac |
114 |
Q |
| |
|
|||||||||||||||||| ||| | ||| |||||| | |||||||| |||||| |||||||||||||||||| ||||| ||||||||||| || || |
|
|
| T |
20380400 |
tcatctcatcccacttcatctaacaaaaaaatcagaaacttcagttttagagaatctggtcaatcactactcagatgaatttccaggtgttgagtcaaat |
20380499 |
T |
|
| Q |
115 |
ctagaaaaagcctctagagttat-tcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgctcagat |
213 |
Q |
| |
|
||||||| ||||| | ||| || | |||||||| |||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| || | |
|
|
| T |
20380500 |
ctagaaagagccttt-gaggtagcttctgatgaagttactttagaaagcccccaacaacaagcaccaaacctacaaatagcctcaacaacctgcccaact |
20380598 |
T |
|
| Q |
214 |
gtctctgctcct |
225 |
Q |
| |
|
||||||| |||| |
|
|
| T |
20380599 |
gtctctgttcct |
20380610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 17261494 - 17261291
Alignment:
| Q |
16 |
tcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatccaacc |
115 |
Q |
| |
|
|||||||||||| ||||||| | ||||| |||||| |||| || || |||||| |||||||||||| || || ||||||||||||| || || |||| |
|
|
| T |
17261494 |
tcatctcatccctcttcaacaaaccaaacatcagaaacatctgtcttagagaatctggtcaatcactgttctggtgaattaccaggtg-tgggtcaaacc |
17261396 |
T |
|
| Q |
116 |
tagaaaaagcctctagagtta-ttcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgctcagatg |
214 |
Q |
| |
|
|||||||||||| | ||| || | |||||||| || |||||||||||||||||||||| |||||| |||||||| ||||||| |||| |||||| |
|
|
| T |
17261395 |
tagaaaaagcctat-gaggtagcttctgatgaatttgctttagaaagcccccaacaacatgcaccaagtgtacaaatggcctcaactaccttaccagatg |
17261297 |
T |
|
| Q |
215 |
tctctg |
220 |
Q |
| |
|
|||||| |
|
|
| T |
17261296 |
tctctg |
17261291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 18682267 - 18682367
Alignment:
| Q |
92 |
aattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaat |
191 |
Q |
| |
|
||||||| ||||||||| |||| |||||||||||||| ||| | |||||| | |||||||||||||| | ||||||||| ||||||||| |||||| |
|
|
| T |
18682267 |
aattacctggtgttgaacccaatatagaaaaagcctctgaagtagcttctgatggagttactttagaaagctcacaacaacaagcaccaaactcacaaat |
18682366 |
T |
|
| Q |
192 |
g |
192 |
Q |
| |
|
| |
|
|
| T |
18682367 |
g |
18682367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 18727829 - 18727929
Alignment:
| Q |
92 |
aattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaat |
191 |
Q |
| |
|
||||||| ||||||||| |||| |||||||||||||| ||| | |||||| | |||||||||||||| | ||||||||| ||||||||| |||||| |
|
|
| T |
18727829 |
aattacctggtgttgaacccaatatagaaaaagcctctgaagtagcttctgatggagttactttagaaagctcacaacaacaagcaccaaactcacaaat |
18727928 |
T |
|
| Q |
192 |
g |
192 |
Q |
| |
|
| |
|
|
| T |
18727929 |
g |
18727929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 18719525 - 18719643
Alignment:
| Q |
76 |
aatcactactcaggcgaatta--ccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaaca |
173 |
Q |
| |
|
||||| |||||||| |||||| || |||||| || |||| ||||||||||||||| ||| | |||||| | |||||||||||||| | |||||||| |
|
|
| T |
18719525 |
aatcattactcaggtgaattatacctggtgttaaacccaatctagaaaaagcctctgaagtagcttctgatggagttactttagaaagctcacaacaaca |
18719624 |
T |
|
| Q |
174 |
aacaccaaacttacaaatg |
192 |
Q |
| |
|
| ||||||||| ||||||| |
|
|
| T |
18719625 |
agcaccaaactcacaaatg |
18719643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 16190337 - 16190293
Alignment:
| Q |
140 |
ctgatgaaattactttagaaagcccccaacaacaaacaccaaact |
184 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| ||||||||| |
|
|
| T |
16190337 |
ctgatgaagttgctttagaaagcccccaacaacaagcaccaaact |
16190293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 202
Target Start/End: Original strand, 17255698 - 17255888
Alignment:
| Q |
12 |
atcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatcc |
111 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||| |||||||||| |||||||| ||||||||||||||||| || |
|
|
| T |
17255698 |
atcatcatctcatcccacttcaactaaccaaacttcagaaacattagttttagagaatctggtcaatcattactcaggtgaattaccaggtgttgagtca |
17255797 |
T |
|
| Q |
112 |
aacctagaaaaagcctctagagtta-ttcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaa |
202 |
Q |
| |
|
|| ||||| | ||||| | ||| || | ||| ||| |||||||| ||| ||||||||||||| |||||||| |||| ||| ||||||||| |
|
|
| T |
17255798 |
aatctagatagagcct-ttgaggtagcttctggcgaagttactttataaatcccccaacaacaaccaccaaacctacagatggcctcaacaa |
17255888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 17222089 - 17222276
Alignment:
| Q |
12 |
atcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatcc |
111 |
Q |
| |
|
|||| |||||||||||| |||| |||| || |||| |||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||| ||| | |
|
|
| T |
17222089 |
atcaccatctcatcccaattcatctacccatacttaagaaccttcagttttggagaatctggtcaatcaccactcaggtgaattaccaggttgtgaggca |
17222188 |
T |
|
| Q |
112 |
aacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaa |
199 |
Q |
| |
|
| ||||| ||||||| | ||| | | ||||||||||||||||| ||||||||||||| |||| ||| |||||||| |||||| |
|
|
| T |
17222189 |
agtctagagaaagcctatgaagtagcttttagtgaaattactttagaaaacccccaacaacaagcacctaacatacaaatggcctcaa |
17222276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 16656862 - 16656925
Alignment:
| Q |
141 |
tgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacc |
204 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
16656862 |
tgatgaagttactttagaaagcccccaacaacaagcaccaaacgtacaaatgacctcaacaacc |
16656925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 12960135 - 12960212
Alignment:
| Q |
12 |
atcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcagg |
89 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||| || ||||||| |||||| ||||||||||||||||||| |
|
|
| T |
12960135 |
atcatcatctcatccctcttcaactaaccaaacttcagaaacaacagttttagagaatctggtcaatcactactcagg |
12960212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 18139531 - 18139683
Alignment:
| Q |
40 |
caaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttat-t |
138 |
Q |
| |
|
||||||||||||||||| || || |||||| | |||||||| || || ||||| |||||||||| |||||| ||||| |||| || ||| || | |
|
|
| T |
18139531 |
caaacttcagaaccatctgtattagagaatctaacaaatcactattctggtgaattgacaggtgttgagtccaactcagaaagagcccct-gaggtagct |
18139629 |
T |
|
| Q |
139 |
cctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatg |
192 |
Q |
| |
|
||| |||| ||||||||||||| | |||||||||||||||||| | ||||||| |
|
|
| T |
18139630 |
tctggtgaagttactttagaaagtctccaacaacaaacaccaaaatcacaaatg |
18139683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 1913 - 2019
Alignment:
| Q |
78 |
tcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaaca |
177 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || |
|
|
| T |
1913 |
tcactactcaggtgaactaccaagtgttgagccctacctaaaaaaagcctctagagttatttctgatgaaattactttagaaagccctcaacaacaagca |
2012 |
T |
|
| Q |
178 |
ccaaact |
184 |
Q |
| |
|
||||||| |
|
|
| T |
2013 |
ccaaact |
2019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 726 - 565
Alignment:
| Q |
64 |
gagaatttggtcaatcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcc |
163 |
Q |
| |
|
|||||| ||||||||||||| || || ||||||||| ||||||| | |||||| | ||||||||| ||| || || |||| || ||||||||| || |
|
|
| T |
726 |
gagaatctggtcaatcactattctggtgaattaccatgtgttgagcctaacctacagaaagcctctgaagtagtttctagtgaagttgctttagaaatcc |
627 |
T |
|
| Q |
164 |
cccaacaacaaacaccaaacttacaaatgacctcaacaacctgctcagatgtctctgctcct |
225 |
Q |
| |
|
||||||||||| |||||||| |||||||| |||||||||| |||||||||||||||| |||| |
|
|
| T |
626 |
cccaacaacaagcaccaaacgtacaaatggcctcaacaacttgctcagatgtctctgttcct |
565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 972 - 854
Alignment:
| Q |
11 |
catcatcatctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatc |
110 |
Q |
| |
|
||||||||||||||||||||||||| || || ||| || ||||||| || || |||||| ||||||||||||| || || ||||||||| ||||||| | |
|
|
| T |
972 |
catcatcatctcatcccacttcaacaacacacactacaaaaccatctgtcttagagaatctggtcaatcactattctggtgaattaccatgtgttgagcc |
873 |
T |
|
| Q |
111 |
caacctagaaaaagcctct |
129 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
872 |
taacctacagaaagcctct |
854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 29034 - 29107
Alignment:
| Q |
152 |
ctttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgctcagatgtctctgctcct |
225 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||| |||| |
|
|
| T |
29034 |
ctttagaaagcccccaacaacaagcaccaaacgtacaaataacctcaacaacccttccagatgtctctgttcct |
29107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0334 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0334
Description:
Target: scaffold0334; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 11603 - 11453
Alignment:
| Q |
54 |
atcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttat-tcctgatgaaattac |
152 |
Q |
| |
|
|||| |||| || ||| |||||| |||||| || || ||||||||||||||||| || || ||||||| ||||||| ||| || | ||| |||| |||| |
|
|
| T |
11603 |
atcaattttagaaaatctggtcagtcactattctggtgaattaccaggtgttgagtcaaatctagaaagagcctct-gaggtagcttctggtgaagttac |
11505 |
T |
|
| Q |
153 |
tttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacc |
204 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
11504 |
tttagaaagcccccaacaacaagaaccaaacctacaaatgacctcaacaacc |
11453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 36136060 - 36135879
Alignment:
| Q |
44 |
cttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctga |
143 |
Q |
| |
|
||||||||||||| || || |||||| || |||||||| || || ||||||||||||||||| |||||| ||||| |||||||| || | ||| |
|
|
| T |
36136060 |
cttcagaaccatctgtattagagaatctgaaaaatcactattctggtgaattaccaggtgttgagtccaactcagaaagagcctctaaggtagcttctgg |
36135961 |
T |
|
| Q |
144 |
tgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgctcagatgtctctgctcct |
225 |
Q |
| |
|
|||| ||||||||||||||||||||||| | ||||||||| | ||||| ||||||| ||| | |||||||||||| |||| |
|
|
| T |
36135960 |
tgaagttactttagaaagcccccaacaatatacaccaaacgcagaaatggcctcaactaccaacccagatgtctctgttcct |
36135879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0789 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0789
Description:
Target: scaffold0789; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 5407 - 5282
Alignment:
| Q |
80 |
actactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacacc |
179 |
Q |
| |
|
|||||||||| ||||||| | || |||| |||| ||||||| ||||||| ||| | |||||| | ||||||||||||||||||||||||| |||| |
|
|
| T |
5407 |
actactcaggtgaattactatgttttgagcccaatctagaaagagcctctgaagtagcttctgatgcagttactttagaaagcccccaacaacatgcacc |
5308 |
T |
|
| Q |
180 |
aaacttacaaatgacctcaacaacct |
205 |
Q |
| |
|
||||||||||||| |||||| ||||| |
|
|
| T |
5307 |
aaacttacaaatggcctcaataacct |
5282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0084 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0084
Description:
Target: scaffold0084; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 40397 - 40231
Alignment:
| Q |
17 |
catctcatcccacttcaactactcaaacttcagaaccatcagttttggagaatttggtcaatcactactcaggcgaattaccaggtgttgaatccaacct |
116 |
Q |
| |
|
||||||||| |||||||| | |||||||||||| || |||| || |||||| ||| | |||||||||||| ||| ||||||||||||| || | || |
|
|
| T |
40397 |
catctcatcaaacttcaaccaaccaaacttcagaaacaccagtgttagagaatctggctagtcactactcaggtgaactaccaggtgttgagccctatct |
40298 |
T |
|
| Q |
117 |
agaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaac |
183 |
Q |
| |
|
|| |||||||||| ||| | ||| |||| |||||||||||||| ||||||||||| | |||||| |
|
|
| T |
40297 |
agcaaaagcctctgaagtagcttctggtgaagttactttagaaagctcccaacaacaatcgccaaac |
40231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 35035 - 35100
Alignment:
| Q |
141 |
tgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctg |
206 |
Q |
| |
|
||||||| || ||||||||||||||||||| ||| || |||||||||||||| ||||||||||||| |
|
|
| T |
35035 |
tgatgaatttgctttagaaagcccccaacatcaagcagcaaacttacaaatggcctcaacaacctg |
35100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 43970 - 43905
Alignment:
| Q |
141 |
tgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctg |
206 |
Q |
| |
|
||||||| || ||||||||||||||||||| ||| || |||||||||||||| ||||||||||||| |
|
|
| T |
43970 |
tgatgaatttgctttagaaagcccccaacatcaagcagcaaacttacaaatggcctcaacaacctg |
43905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0435 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0435
Description:
Target: scaffold0435; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 1137 - 1257
Alignment:
| Q |
78 |
tcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaaca |
177 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||| || | ||||||| ||||||| ||| | |||||||| |||||||||||||||| |||||||| || |
|
|
| T |
1137 |
tcactactcaggtgaactaccaagtgttgagccctatctagaaatagcctctgaagtagcttctgatgaagatactttagaaagccccgaacaacaagca |
1236 |
T |
|
| Q |
178 |
ccaaacttacaaatgacctca |
198 |
Q |
| |
|
||||||||||| ||| ||||| |
|
|
| T |
1237 |
ccaaacttacagatggcctca |
1257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 1034 - 978
Alignment:
| Q |
143 |
atgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaa |
199 |
Q |
| |
|
||||| |||||| |||||||||||||||||| ||||| |||||||||||| |||||| |
|
|
| T |
1034 |
atgaagttacttcagaaagcccccaacaacatacacctaacttacaaatggcctcaa |
978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 18379961 - 18379897
Alignment:
| Q |
141 |
tgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacct |
205 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||| |||||| ||||| |||||| |
|
|
| T |
18379961 |
tgatgaagttactttagaaagcccccaacaacaagcaccaaacacacaaattgcctcatcaacct |
18379897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 21627142 - 21627085
Alignment:
| Q |
142 |
gatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaa |
199 |
Q |
| |
|
|||||| || ||||||||||||| |||||||||||||||||| ||||||| |||||| |
|
|
| T |
21627142 |
gatgaagttgctttagaaagcccacaacaacaaacaccaaacacacaaatggcctcaa |
21627085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 20110942 - 20110998
Alignment:
| Q |
164 |
cccaacaacaaacaccaaacttacaaatgacctcaacaacctgctcagatgtctctg |
220 |
Q |
| |
|
||||||||||| |||| ||| |||||||| ||| |||||||||| |||||||||||| |
|
|
| T |
20110942 |
cccaacaacaagcacctaacgtacaaatggccttaacaacctgcccagatgtctctg |
20110998 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 22804141 - 22804099
Alignment:
| Q |
149 |
ttactttagaaagcccccaacaacaaacaccaaacttacaaat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| | |||||| |
|
|
| T |
22804141 |
ttactttagaaagcccccaacaacaatcaccaaaatcacaaat |
22804099 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0315 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0315
Description:
Target: scaffold0315; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 20000 - 19945
Alignment:
| Q |
152 |
ctttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacctgc |
207 |
Q |
| |
|
|||||||||||||||||| | || ||||||||||||||||| ||||||||| |||| |
|
|
| T |
20000 |
ctttagaaagcccccaactataagcaccaaacttacaaatggcctcaacaaactgc |
19945 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0175
Description:
Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 9575 - 9646
Alignment:
| Q |
121 |
aaagcctctagagttattcctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatg |
192 |
Q |
| |
|
|||||||||| ||| || |||||||| |||||||||||| |||||||||| || ||||||||| ||||||| |
|
|
| T |
9575 |
aaagcctctaaagtagtttctgatgaagttactttagaaatcccccaacaataagcaccaaactcacaaatg |
9646 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:
Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 1594 - 1538
Alignment:
| Q |
140 |
ctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacct |
196 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
1594 |
ctgatgaagttattttagaaagcccccaacaacatgaacccaacttacaaatgacct |
1538 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0261 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0261
Description:
Target: scaffold0261; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 206
Target Start/End: Original strand, 2899 - 3031
Alignment:
| Q |
74 |
tcaatcactactcaggcgaattaccaggtgttgaatccaacctagaaaaagcctctagagttattcctgatgaaattactttagaaagcccccaacaaca |
173 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| || ||||| |||||||||| || | || |||| ||||||| ||||||||||||| ||| |
|
|
| T |
2899 |
tcaatcactactcaggtgaattaccaggttgtgagctaaatctagagaaagcctctaaagcagcttctagtgaagttactttggaaagcccccaactaca |
2998 |
T |
|
| Q |
174 |
aacaccaaacttacaaatgacctcaacaacctg |
206 |
Q |
| |
|
| |||| ||| |||||||| |||||| |||||| |
|
|
| T |
2999 |
agcacctaacgtacaaatggcctcaataacctg |
3031 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:
Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 26011 - 25977
Alignment:
| Q |
145 |
gaaattactttagaaagcccccaacaacaaacacc |
179 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |
|
|
| T |
26011 |
gaaattactttagaaagccctcaacaacaaacacc |
25977 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0080 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0080
Description:
Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 22805 - 22740
Alignment:
| Q |
140 |
ctgatgaaattactttagaaagcccccaacaacaaacaccaaacttacaaatgacctcaacaacct |
205 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||| || ||||| || |||| ||||| |||||| |
|
|
| T |
22805 |
ctgatgaagttactttagaaagcccccatcaacaagcatcaaacgcacgaatggcctcatcaacct |
22740 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 145125 - 145084
Alignment:
| Q |
149 |
ttactttagaaagcccccaacaacaaacaccaaacttacaaa |
190 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||| ||||| |
|
|
| T |
145125 |
ttactttagaaaacccccaacaacaatcaccaaactcacaaa |
145084 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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