View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7911_high_10 (Length: 220)
Name: NF7911_high_10
Description: NF7911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7911_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 21323465 - 21323294
Alignment:
| Q |
20 |
cttatcttatttactactattataattttatacgatatgggtagcgtacttcttcattacagcttgatgtataattagcacaatctttgtagttatcgct |
119 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |
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| T |
21323465 |
cttatcttatttactactattataattttatacgatatgggtagcgtacttcttcattacagcttgttgtataactagcacaatctttgtagttatcgct |
21323366 |
T |
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| Q |
120 |
tttatcgtaacaaattcttatttcaagcaaatattcttttgtagggtcacaaacaatttgtggctctttttt |
191 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21323365 |
tttatcgtagcaaattcttatttcaagcaaatattcttttgtagggtcacaaacaatttgtggctctttttt |
21323294 |
T |
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