View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7912_low_17 (Length: 271)
Name: NF7912_low_17
Description: NF7912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7912_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 47226873 - 47227098
Alignment:
| Q |
19 |
gtatatgatctgaattgcgaaaacctattaactatgaaattagactgtgaccccttcctcttcgacttggaccagagtatgcttgagccatgatgaagcg |
118 |
Q |
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| T |
47226873 |
gtatatgatctgaattgcgaaaacctattaactatgaaattagactgtgaccccttcctcttcgacttggaccagagtatgcttgagccatgatgaagtg |
47226972 |
T |
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| Q |
119 |
attgaaggagaaggaagtagcaggtgaatgcctcgaaccctctacacaccatgatgacaagcaaaataagatcatcagcaccaaaataagaacattttgc |
218 |
Q |
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| T |
47226973 |
attgaaggagaaggaagtagcaggtgaatgcctcgaaccctctacacaccatgatgacaagcaaaataagatcatcagcaccaaaataagaacatgttgc |
47227072 |
T |
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| Q |
219 |
tgtgttaacaatatacatttcatctc |
244 |
Q |
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| T |
47227073 |
tgtgtgaacaatatacatttcatctc |
47227098 |
T |
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