View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7912_low_2 (Length: 591)

Name: NF7912_low_2
Description: NF7912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7912_low_2
NF7912_low_2
[»] chr5 (29 HSPs)
chr5 (178-429)||(15036915-15037149)
chr5 (178-429)||(15039412-15039646)
chr5 (178-429)||(15041909-15042143)
chr5 (19-183)||(15042187-15042351)
chr5 (19-183)||(15037193-15037351)
chr5 (19-183)||(15039690-15039848)
chr5 (349-425)||(15044366-15044442)
chr5 (355-477)||(20854843-20854966)
chr5 (385-481)||(235578-235676)
chr5 (385-481)||(236896-236994)
chr5 (413-481)||(17071210-17071279)
chr5 (415-481)||(7632081-7632148)
chr5 (439-481)||(237844-237886)
chr5 (439-481)||(19128756-19128798)
chr5 (439-481)||(19359690-19359732)
chr5 (439-481)||(28705902-28705944)
chr5 (109-174)||(20854459-20854524)
chr5 (413-481)||(34600247-34600316)
chr5 (415-481)||(36038681-36038748)
chr5 (439-481)||(1281822-1281864)
chr5 (439-481)||(10554508-10554550)
chr5 (441-483)||(19366591-19366633)
chr5 (254-308)||(27363870-27363924)
chr5 (439-481)||(38056780-38056822)
chr5 (451-481)||(43510975-43511005)
chr5 (418-481)||(29046014-29046079)
chr5 (446-481)||(17071824-17071860)
chr5 (441-481)||(27364512-27364552)
chr5 (439-479)||(28705153-28705193)
[»] chr1 (34 HSPs)
chr1 (225-466)||(168891-169126)
chr1 (355-459)||(46812126-46812231)
chr1 (324-429)||(11704122-11704227)
chr1 (409-481)||(49680797-49680870)
chr1 (438-481)||(36390390-36390433)
chr1 (415-481)||(11704807-11704874)
chr1 (438-481)||(12760762-12760805)
chr1 (392-472)||(10120778-10120860)
chr1 (439-481)||(13142691-13142733)
chr1 (439-481)||(17172686-17172728)
chr1 (439-481)||(25733204-25733246)
chr1 (418-481)||(30932797-30932862)
chr1 (418-481)||(4433849-4433913)
chr1 (418-481)||(7406231-7406295)
chr1 (415-481)||(7558434-7558502)
chr1 (449-481)||(36688402-36688434)
chr1 (415-481)||(7559198-7559265)
chr1 (439-481)||(24991956-24991998)
chr1 (439-481)||(25468496-25468538)
chr1 (439-481)||(27256736-27256778)
chr1 (413-470)||(30663355-30663413)
chr1 (439-481)||(46391890-46391932)
chr1 (418-470)||(10121554-10121607)
chr1 (418-470)||(13262830-13262883)
chr1 (439-480)||(28182096-28182137)
chr1 (413-481)||(34309227-34309296)
chr1 (109-174)||(46811728-46811793)
chr1 (418-481)||(169629-169693)
chr1 (418-481)||(4439208-4439272)
chr1 (418-481)||(8987776-8987840)
chr1 (438-481)||(17171916-17171960)
chr1 (439-479)||(19172599-19172639)
chr1 (449-481)||(26119428-26119460)
chr1 (449-481)||(31572480-31572512)
[»] chr2 (23 HSPs)
chr2 (489-559)||(3910729-3910799)
chr2 (385-481)||(1297090-1297188)
chr2 (385-477)||(9275577-9275671)
chr2 (421-481)||(12725619-12725680)
chr2 (438-481)||(11751091-11751134)
chr2 (439-481)||(20432391-20432433)
chr2 (418-481)||(29559421-29559485)
chr2 (438-481)||(22301181-22301224)
chr2 (438-481)||(27177899-27177942)
chr2 (409-478)||(9276322-9276392)
chr2 (439-481)||(23857047-23857089)
chr2 (418-481)||(29512358-29512422)
chr2 (418-481)||(29719433-29719497)
chr2 (438-481)||(9540318-9540361)
chr2 (415-481)||(15902107-15902174)
chr2 (409-481)||(1296365-1296439)
chr2 (413-481)||(11750243-11750313)
chr2 (413-474)||(18174666-18174728)
chr2 (439-481)||(36238753-36238795)
chr2 (409-481)||(15774190-15774262)
chr2 (440-481)||(24121314-24121355)
chr2 (449-481)||(19428188-19428220)
chr2 (438-474)||(26752021-26752057)
[»] chr7 (32 HSPs)
chr7 (355-479)||(46428175-46428300)
chr7 (409-481)||(37950460-37950533)
chr7 (412-481)||(3772522-3772592)
chr7 (409-481)||(27948432-27948505)
chr7 (385-475)||(25343295-25343387)
chr7 (385-481)||(25342482-25342581)
chr7 (439-481)||(16664149-16664191)
chr7 (439-481)||(17638509-17638551)
chr7 (355-425)||(23902662-23902732)
chr7 (409-481)||(30660578-30660652)
chr7 (439-481)||(37395523-37395565)
chr7 (439-481)||(45099917-45099959)
chr7 (413-481)||(30661452-30661521)
chr7 (444-481)||(33781585-33781622)
chr7 (110-174)||(23902331-23902395)
chr7 (418-481)||(45161955-45162019)
chr7 (415-481)||(3688370-3688437)
chr7 (438-481)||(38225286-38225329)
chr7 (446-481)||(47171437-47171472)
chr7 (439-481)||(3903363-3903405)
chr7 (439-481)||(13785617-13785659)
chr7 (439-481)||(14305076-14305118)
chr7 (439-481)||(19068419-19068461)
chr7 (420-481)||(24453730-24453792)
chr7 (393-481)||(18977746-18977834)
chr7 (394-481)||(37706413-37706502)
chr7 (399-470)||(40273557-40273630)
chr7 (418-481)||(7668469-7668532)
chr7 (449-481)||(9749902-9749934)
chr7 (415-466)||(14686132-14686184)
chr7 (446-478)||(15305296-15305328)
chr7 (438-481)||(46428840-46428884)
[»] chr4 (32 HSPs)
chr4 (355-470)||(47785738-47785854)
chr4 (409-481)||(26147025-26147098)
chr4 (415-480)||(2446160-2446226)
chr4 (439-481)||(31329741-31329783)
chr4 (413-481)||(47688476-47688546)
chr4 (439-481)||(53773610-53773652)
chr4 (413-481)||(7841531-7841600)
chr4 (413-481)||(12920271-12920340)
chr4 (413-481)||(20774177-20774246)
chr4 (440-481)||(40495082-40495123)
chr4 (446-479)||(47687898-47687931)
chr4 (449-481)||(46169014-46169046)
chr4 (438-481)||(142547-142590)
chr4 (411-481)||(52871285-52871356)
chr4 (439-481)||(53772793-53772836)
chr4 (389-466)||(5046455-5046533)
chr4 (439-481)||(8248544-8248586)
chr4 (439-481)||(8266209-8266251)
chr4 (439-481)||(12368679-12368721)
chr4 (403-464)||(16903630-16903692)
chr4 (439-481)||(16903692-16903734)
chr4 (451-481)||(43147273-43147303)
chr4 (439-481)||(53732422-53732464)
chr4 (409-481)||(11938698-11938771)
chr4 (394-470)||(32089591-32089668)
chr4 (393-465)||(56262481-56262554)
chr4 (449-481)||(1466027-1466059)
chr4 (449-481)||(3654020-3654052)
chr4 (441-481)||(5591057-5591097)
chr4 (449-481)||(24008380-24008412)
chr4 (449-481)||(44470160-44470192)
chr4 (441-481)||(48127273-48127313)
[»] chr3 (22 HSPs)
chr3 (261-429)||(29853983-29854159)
chr3 (438-481)||(13477044-13477087)
chr3 (439-481)||(48648190-48648232)
chr3 (440-481)||(6775255-6775296)
chr3 (416-480)||(14871141-14871206)
chr3 (109-174)||(29854365-29854430)
chr3 (393-481)||(37988195-37988284)
chr3 (438-481)||(20212967-20213010)
chr3 (392-481)||(54458640-54458731)
chr3 (438-480)||(8949923-8949965)
chr3 (439-481)||(21726754-21726796)
chr3 (439-481)||(21727553-21727595)
chr3 (412-481)||(48764464-48764534)
chr3 (393-465)||(48507009-48507082)
chr3 (438-475)||(52605506-52605543)
chr3 (418-481)||(264454-264517)
chr3 (379-481)||(23706765-23706868)
chr3 (379-481)||(23725221-23725324)
chr3 (379-481)||(23743677-23743780)
chr3 (418-481)||(31115601-31115665)
chr3 (418-481)||(31974638-31974702)
chr3 (448-476)||(43202830-43202858)
[»] chr8 (16 HSPs)
chr8 (385-481)||(38576269-38576367)
chr8 (409-481)||(8996966-8997039)
chr8 (418-481)||(41974627-41974691)
chr8 (438-481)||(27441453-27441496)
chr8 (438-481)||(27442163-27442206)
chr8 (396-470)||(31602014-31602090)
chr8 (438-481)||(9197082-9197125)
chr8 (439-481)||(3165145-3165187)
chr8 (439-481)||(3291557-3291599)
chr8 (412-481)||(31642082-31642152)
chr8 (440-481)||(39860097-39860138)
chr8 (439-475)||(14825636-14825672)
chr8 (449-481)||(14826195-14826227)
chr8 (449-481)||(28930864-28930896)
chr8 (449-481)||(32979059-32979091)
chr8 (394-481)||(37064804-37064891)
[»] chr6 (13 HSPs)
chr6 (412-481)||(26528809-26528879)
chr6 (412-481)||(10171262-10171332)
chr6 (440-481)||(25060802-25060843)
chr6 (418-481)||(19310987-19311051)
chr6 (412-481)||(10171961-10172032)
chr6 (412-481)||(12344880-12344950)
chr6 (418-481)||(19323768-19323832)
chr6 (449-481)||(21133260-21133292)
chr6 (449-481)||(25061583-25061615)
chr6 (412-481)||(26529508-26529579)
chr6 (450-481)||(33435326-33435357)
chr6 (448-481)||(18227718-18227751)
chr6 (449-481)||(4940258-4940290)
[»] scaffold0504 (1 HSPs)
scaffold0504 (422-481)||(5385-5445)
[»] scaffold0002 (1 HSPs)
scaffold0002 (403-481)||(428888-428968)
[»] scaffold0176 (2 HSPs)
scaffold0176 (439-481)||(26578-26620)
scaffold0176 (441-481)||(27552-27592)
[»] scaffold0086 (1 HSPs)
scaffold0086 (439-481)||(8315-8357)
[»] scaffold0418 (1 HSPs)
scaffold0418 (440-481)||(6909-6950)
[»] scaffold2007 (1 HSPs)
scaffold2007 (418-481)||(737-801)
[»] scaffold0096 (1 HSPs)
scaffold0096 (439-481)||(39882-39924)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 1e-79; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 178 - 429
Target Start/End: Complemental strand, 15037149 - 15036915
Alignment:
Q  178 aaaaaccgtttaaataaatttaattagtggccaannnnnnnagtagagtaaaatcacaatcaggtatggacaaggaggttatagtgtaattgaaatcgat 277  Q
    ||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||| |||||||||||| ||||                  
T  15037149 aaaaaccgtttaaataaatttaattagtggccaatttttttagtacagtaaaatcacaatcaggtatgaacaaggaggttacagtg-------------- 15037064  T
Q  278 gaacaggacatacatgcttccactgtttgcttcctttgttcctcataacacattcagcggcaaaacattgcatgaaagaaaagctcacgcgagttcacta 377  Q
       |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15037063 ---caggacatgcatgcttccactgtttgcttcctttgttcctcataacacattcagcggcaaaacattgcatgaaagaaaagctcacacgagttcacta 15036967  T
Q  378 caccaacaatatgtgcctttggattaaatagattgacggatgagatttggtg 429  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15036966 caccaacaatatgtgcctttggattaaatagattgagggatgagatttggtg 15036915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 178 - 429
Target Start/End: Complemental strand, 15039646 - 15039412
Alignment:
Q  178 aaaaaccgtttaaataaatttaattagtggccaannnnnnnagtagagtaaaatcacaatcaggtatggacaaggaggttatagtgtaattgaaatcgat 277  Q
    ||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||| |||||||||||| ||||                  
T  15039646 aaaaaccgtttaaataaatttaattagtggccaatttttttagtacagtaaaatcacaatcaggtatgaacaaggaggttacagtg-------------- 15039561  T
Q  278 gaacaggacatacatgcttccactgtttgcttcctttgttcctcataacacattcagcggcaaaacattgcatgaaagaaaagctcacgcgagttcacta 377  Q
       |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15039560 ---caggacatgcatgcttccactgtttgcttcctttgttcctcataacacattcagcggcaaaacattgcatgaaagaaaagctcacacgagttcacta 15039464  T
Q  378 caccaacaatatgtgcctttggattaaatagattgacggatgagatttggtg 429  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15039463 caccaacaatatgtgcctttggattaaatagattgagggatgagatttggtg 15039412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 178 - 429
Target Start/End: Complemental strand, 15042143 - 15041909
Alignment:
Q  178 aaaaaccgtttaaataaatttaattagtggccaannnnnnnagtagagtaaaatcacaatcaggtatggacaaggaggttatagtgtaattgaaatcgat 277  Q
    ||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||| |||||||||||| ||||                  
T  15042143 aaaaaccgtttaaataaatttaattagtggccaatttttttagtatagtaaaatcacaatcaggtatgaacaaggaggttacagtg-------------- 15042058  T
Q  278 gaacaggacatacatgcttccactgtttgcttcctttgttcctcataacacattcagcggcaaaacattgcatgaaagaaaagctcacgcgagttcacta 377  Q
       |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15042057 ---caggacatgcatgcttccactgtttgcttcctttgttcctcataacacattcagcggcaaaacattgcatgaaagaaaagctcacacgagttcacta 15041961  T
Q  378 caccaacaatatgtgcctttggattaaatagattgacggatgagatttggtg 429  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15041960 caccaacaatatgtgcctttggattaaatagattgagggatgagatttggtg 15041909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 15042351 - 15042187
Alignment:
Q  19 atgagatcaatttgatggatatcaattttattaattgaaaatcattagattggagatcaattttatgatcaatatcctccttgtttttctaatcgatatg 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15042351 atgagatcaatttgatggatatcaattttatcaattgaaaatcattagattggagatcaattttatgatcaatatcctccttgtttttctaatagatatg 15042252  T
Q  119 gtaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttctctaaaaaac 183  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15042251 gaaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttctctgaaaaac 15042187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 15037351 - 15037193
Alignment:
Q  19 atgagatcaatttgatggatatcaattttattaattgaaaatcattagattggagatcaattttatgatcaatatcctccttgtttttctaatcgatatg 118  Q
    |||||| |||||||||||||||||||||||| ||||||      || |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15037351 atgagaacaatttgatggatatcaattttatcaattga------tttgattggagatcaattttatgatcaatatcctccttgtttttctaatggatatg 15037258  T
Q  119 gtaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttctctaaaaaac 183  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15037257 gaaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttctctgaaaaac 15037193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 15039848 - 15039690
Alignment:
Q  19 atgagatcaatttgatggatatcaattttattaattgaaaatcattagattggagatcaattttatgatcaatatcctccttgtttttctaatcgatatg 118  Q
    |||||| |||||||||||||||||||||||| ||||||      || |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15039848 atgagaacaatttgatggatatcaattttatcaattga------tttgattggagatcaattttatgatcaatatcctccttgtttttctaatggatatg 15039755  T
Q  119 gtaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttctctaaaaaac 183  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15039754 gaaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttctctgaaaaac 15039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 15044442 - 15044366
Alignment:
Q  349 atgaaagaaaagctcacgcgagttcactacaccaacaatatgtgcctttggattaaatagattgacggatgagattt 425  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15044442 atgaaagaaaagctcacacgagttcactacaccaacaatatgtgcctttggattaaatagattgagggatgagattt 15044366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 355 - 477
Target Start/End: Original strand, 20854843 - 20854966
Alignment:
Q  355 gaaaagctcacgcgagttcactacaccaacaatatgtgcctttggattaaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtg 453  Q
    ||||| ||||||| ||||||||||||||| ||| |||| ||||||| | ||||||| ||||| | |||||||||| || | ||| | || | ||||||||    
T  20854843 gaaaaactcacgctagttcactacaccaataatttgtgactttggaatgaatagatagacggttcagatttggtgtcaacgaatccattaacacctggtg 20854942  T
Q  454 tcaacggatcctaactcatatata 477  Q
    |||||||||| || ||||||||||    
T  20854943 tcaacggatcatatctcatatata 20854966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 481
Target Start/End: Complemental strand, 235676 - 235578
Alignment:
Q  385 aatatgtgcctttggattaaat-agattgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||| |||||||| | || ||||| |||||||||||| || | |||| ||||| |||||||||||| |||||||||||||||||||||||    
T  235676 aatatgagccttttgattaaatgaaatagacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctaactcatatatatata 235578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 385 - 481
Target Start/End: Original strand, 236896 - 236994
Alignment:
Q  385 aatatgtgcctttggattaaat-agattgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||| |||||||| | || ||||| |||||||||||| |  | |||| ||||| |||||||||||| |||||||||||||||||||||||    
T  236896 aatatgagccttttgattaaatgaaatagacggttgagatttggtgtctacgaatccgttgacacctggtgtcaatggatcctaactcatatatatata 236994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 481
Target Start/End: Complemental strand, 17071279 - 17071210
Alignment:
Q  413 acggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||||| || | ||| |||||| ||||| ||||||||||||||||||||||||||||||    
T  17071279 acggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaactcatatatatata 17071210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 481
Target Start/End: Complemental strand, 7632148 - 7632081
Alignment:
Q  415 ggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||| || | |||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  7632148 ggataagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctatctcatatatatata 7632081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 237844 - 237886
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  237844 cgttgacacctggtgtcaacggatcctgactcatatatatata 237886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 19128798 - 19128756
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  19128798 cgttgacacctggtgtcaacggatcctgactcatatatatata 19128756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 19359732 - 19359690
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  19359732 cgttgacacctggtgtcaacggatcctgactcatatatatata 19359690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 28705902 - 28705944
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  28705902 cgttgacacctggtgtcaacggatcctgactcatatatatata 28705944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 20854459 - 20854524
Alignment:
Q  109 aatcgatatggtaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttct 174  Q
    |||| |||||| || |||||||||||||||| ||||| | ||| ||||||||| ||||||||||||    
T  20854459 aatcaatatggaaaatctctatgagcaattttatggaaacgtgattttgaaattcgttagtgttct 20854524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 481
Target Start/End: Complemental strand, 34600316 - 34600247
Alignment:
Q  413 acggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||||| || | ||| |||||| ||||| |||||||||||||||||| |||||||||||    
T  34600316 acggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaacttatatatatata 34600247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 481
Target Start/End: Complemental strand, 36038748 - 36038681
Alignment:
Q  415 ggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||  | | |||| |||||||||||||||||||||||||   ||||||||||||||    
T  36038748 ggatgagatttggtgttaacgaatccgttgatacctggtgtcaacggatcccctctcatatatatata 36038681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 1281864 - 1281822
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||| |||||||| ||||||||||||||    
T  1281864 cgttgacacctggtgtcaatggatcctatctcatatatatata 1281822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 10554550 - 10554508
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  10554550 cgttgacacctggtgtcaacggatcctgtctcatatatatata 10554508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 483
Target Start/End: Original strand, 19366591 - 19366633
Alignment:
Q  441 ttgatacctggtgtcaacggatcctaactcatatatatataca 483  Q
    |||| |||||||||||||||||||||||||||| | |||||||    
T  19366591 ttgacacctggtgtcaacggatcctaactcataaaaatataca 19366633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 27363924 - 27363870
Alignment:
Q  254 ggttatagtgtaattgaaatcgatgaacaggacatacatgcttccactgtttgct 308  Q
    |||||| |||||||||||||  ||||||| |||| |||||||||||| |||||||    
T  27363924 ggttattgtgtaattgaaatacatgaacatgacacacatgcttccaccgtttgct 27363870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 38056822 - 38056780
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||    
T  38056822 cgttgacacctggtgtcaacagatcctatctcatatatatata 38056780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 481
Target Start/End: Original strand, 43510975 - 43511005
Alignment:
Q  451 gtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||||||||||||||||    
T  43510975 gtgtcaacggatcctaactcatatatatata 43511005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 29046079 - 29046014
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    |||||||||||| || | |||| ||||| |||||||||||||||||||| |||| |||||||||||    
T  29046079 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatatatata 29046014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 481
Target Start/End: Original strand, 17071824 - 17071860
Alignment:
Q  446 acctggtgtcaacggatcctaactc-atatatatata 481  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17071824 acctggtgtcaacggatcctaactctatatatatata 17071860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 481
Target Start/End: Original strand, 27364512 - 27364552
Alignment:
Q  441 ttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| ||||||||||||||||||||  ||||||||||||||    
T  27364512 ttgacacctggtgtcaacggatcctgtctcatatatatata 27364552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 28705193 - 28705153
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatata 479  Q
    |||||| ||||||||||||||||| || |||||||||||||    
T  28705193 cgttgacacctggtgtcaacggatactgactcatatatata 28705153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 8e-38; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 225 - 466
Target Start/End: Complemental strand, 169126 - 168891
Alignment:
Q  225 gtaaaatcacaatcaggtatggacaaggaggttatagtgtaattgaaatcgatgaacaggacatacatgcttccactgtttgcttcctttgttcctcata 324  Q
    ||||||||||||||   |||  ||||| ||||||  |||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||| ||| ||    
T  169126 gtaaaatcacaatcgattataaacaagaaggttactgtgtaattgaaatccatgaacatgacacacatgcttccactgtttgcttcccttgttgctcgta 169027  T
Q  325 acacattcagcggcaaaacattgcatgaaagaaaagctcacgcgagttcactacaccaacaatatgtgcctttggattaaatagattgacggatgagatt 424  Q
    |||||||||||||| |||  |||| |  | |||||||||       ||||||||||| ||||| ||||||||||||||||||||||  |||| |||||||    
T  169026 acacattcagcggcgaaaatttgcgtagaggaaaagctc-------ttcactacacccacaatttgtgcctttggattaaatagataaacggttgagatt 168934  T
Q  425 tggtg-ccatcaaatcgttgatacctggtgtcaacggatccta 466  Q
    ||||| | || ||  || ||| |||||||||||||||||||||    
T  168933 tggtgtcaatgaatccgctgacacctggtgtcaacggatccta 168891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 459
Target Start/End: Original strand, 46812126 - 46812231
Alignment:
Q  355 gaaaagctcacgcgagttcactacaccaacaatatgtgcctttggattaaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtg 453  Q
    ||||| ||||||| ||||||||||||||| ||| ||||||||| |||||||||||| ||||| |||||||||||| || | ||| |||||| ||||||||    
T  46812126 gaaaaactcacgctagttcactacaccaataatctgtgcctttagattaaatagatagacggttgagatttggtgtcaacgaatccgttgacacctggtg 46812225  T
Q  454 tcaacg 459  Q
    | ||||    
T  46812226 ttaacg 46812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 324 - 429
Target Start/End: Complemental strand, 11704227 - 11704122
Alignment:
Q  324 aacacattcagcggcaaaacattgcatgaaagaaaagctcacgcgagttcactacaccaacaatatgtgcctttggattaaatagattgacggatgagat 423  Q
    |||||| || |||||||||| |||| |  | ||||| ||||||| ||||||||||||||  |||||||||||||||||||||||||| || || ||| ||    
T  11704227 aacacagtcggcggcaaaacgttgcgtacaggaaaacctcacgccagttcactacaccattaatatgtgcctttggattaaatagatagatggttgaaat 11704128  T
Q  424 ttggtg 429  Q
    ||||||    
T  11704127 ttggtg 11704122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 49680870 - 49680797
Alignment:
Q  409 attgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| ||||||||||||||| || | |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  49680870 attgatggatgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatatata 49680797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 481
Target Start/End: Original strand, 36390390 - 36390433
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  36390390 tcgttgacacctggtgtcaacggatcctaactcatatatatata 36390433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 481
Target Start/End: Original strand, 11704807 - 11704874
Alignment:
Q  415 ggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||| || | |||| ||||| || ||||||||| |||||||||||||||||||||||    
T  11704807 ggatgagatttggtgtcaacgaatccgttgacacttggtgtcaatggatcctaactcatatatatata 11704874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 12760805 - 12760762
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  12760805 tcgttgacaccaggtgtcaacggatcctaactcatatatatata 12760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 472
Target Start/End: Complemental strand, 10120860 - 10120778
Alignment:
Q  392 gcctttggattaa-atagattgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcat 472  Q
    ||||||||||||| ||| |||||||||   ||||||||| || | |||| ||||| |||||||||||||||||||||||||||    
T  10120860 gcctttggattaacataaattgacggaaaggatttggtgtcaaccaatccgttgacacctggtgtcaacggatcctaactcat 10120778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 13142691 - 13142733
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  13142691 cgttgacacctggtgtcaagggatcctaactcatatatatata 13142733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 17172686 - 17172728
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  17172686 cgttgacacctggtgtcaacggatcctatctcatatatatata 17172728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 25733204 - 25733246
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  25733204 cgttgatacctgatgtcaacggatcttaactcatatatatata 25733246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 30932797 - 30932862
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    ||||||||||||||| | |||| ||||| |||||||||||||||||||| |||| |||||||||||    
T  30932797 tgagatttggtgccaacgaatccgttgacacctggtgtcaacggatcctcactctatatatatata 30932862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 4433849 - 4433913
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||||| ||||||||||||||||||||| || |||||||||||    
T  4433849 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctatcttatatatatata 4433913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 7406295 - 7406231
Alignment:
Q  418 tgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | ||| |||| | |||||||||||||||||||| |||||||||||||||    
T  7406295 tgagatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctgactcatatatatata 7406231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 481
Target Start/End: Complemental strand, 7558502 - 7558434
Alignment:
Q  415 ggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    ||||||||||||||| || |||||| ||||| || |||||||||||||||||| ||| |||||||||||    
T  7558502 ggatgagatttggtgtcaacaaatccgttgacacttggtgtcaacggatcctatctctatatatatata 7558434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 36688434 - 36688402
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||||||||||||||||||    
T  36688434 tggtgtcaacggatcctaactcatatatatata 36688402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 481
Target Start/End: Original strand, 7559198 - 7559265
Alignment:
Q  415 ggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||| || |  ||| ||||| ||||||||||||||||||||  ||||||||||||||    
T  7559198 ggatgagatttggtgtcaacggatccgttgacacctggtgtcaacggatcctgtctcatatatatata 7559265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 24991998 - 24991956
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||| |||||||| ||||||||||||||    
T  24991998 cgttgacacctggtgtcaatggatcctatctcatatatatata 24991956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 25468538 - 25468496
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||| ||||||| |||||||||||||||    
T  25468538 cgttgacacctggtgtcaatggatcctgactcatatatatata 25468496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 27256736 - 27256778
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  27256736 cgttgacacctggtgtcaacggatcctgtctcatatatatata 27256778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 30663413 - 30663355
Alignment:
Q  413 acggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc 470  Q
    |||| |||||||||||| || | |||| |||||||||||||||||||||||||| ||||    
T  30663413 acggttgagatttggtgtcaacgaatccgttgatacctggtgtcaacggatcctgactc 30663355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 46391890 - 46391932
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  46391890 cgttgacacctggtgtcaacggatcctgtctcatatatatata 46391932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 10121554 - 10121607
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc 470  Q
    |||||||||||| || | |||| ||||| |||||||||||||||||||||||||    
T  10121554 tgagatttggtgtcaaccaatccgttgacacctggtgtcaacggatcctaactc 10121607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 13262883 - 13262830
Alignment:
Q  418 tgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactc 470  Q
    |||||||||||| || | ||| |||||| |||||||||||||||||||||||||    
T  13262883 tgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactc 13262830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 28182096 - 28182137
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatat 480  Q
    |||||| ||||||||||||| |||||| ||||||||||||||    
T  28182096 cgttgacacctggtgtcaacagatcctcactcatatatatat 28182137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 481
Target Start/End: Original strand, 34309227 - 34309296
Alignment:
Q  413 acggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||||| || | |||| ||||| ||||||||||||||||||||  |||| |||||||||    
T  34309227 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcacatatatata 34309296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 46811728 - 46811793
Alignment:
Q  109 aatcgatatggtaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttct 174  Q
    |||||| |||| || |||||||||||||||| ||||| | ||| ||||||||| ||| ||||||||    
T  46811728 aatcgacatggaaaatctctatgagcaattttatggaaacgtgattttgaaattcgtcagtgttct 46811793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 169629 - 169693
Alignment:
Q  418 tgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| ||  |||| |||||| ||||||||||||||||||||| |||| | |||||||    
T  169629 tgagatttggtgtcaataaattcgttgacacctggtgtcaacggatcctacctcacacatatata 169693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 4439208 - 4439272
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||||| ||| ||||||||||||||||| || |||||||||||    
T  4439208 tgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctatcttatatatatata 4439272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 8987840 - 8987776
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||||| ||||| ||||||| |||||| |||||||||||||||    
T  8987840 tgagatttggtgtcaacgaatccgttgacacctgatgtcaaccgatcctgactcatatatatata 8987776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 17171960 - 17171916
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||    
T  17171960 tcgttgacacctggtgtcaacggatcctatctctatatatatata 17171916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 479
Target Start/End: Original strand, 19172599 - 19172639
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatata 479  Q
    |||||| |||||||||||| ||||||| |||||||||||||    
T  19172599 cgttgacacctggtgtcaatggatcctgactcatatatata 19172639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 26119428 - 26119460
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| |||||||||||||||    
T  26119428 tggtgtcaacggatcctgactcatatatatata 26119460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 31572480 - 31572512
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| |||||||||||||||    
T  31572480 tggtgtcaacggatcctgactcatatatatata 31572512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 7e-32; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 489 - 559
Target Start/End: Original strand, 3910729 - 3910799
Alignment:
Q  489 acgattcaaaaaagaggtactaagacgtgacttatatctgtttctctcattatctcaccataaactaaccc 559  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3910729 acgattcaaaaaagaggtactaagacgtgacttatatctgtttctctcattatctcaccataaactaaccc 3910799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 481
Target Start/End: Original strand, 1297090 - 1297188
Alignment:
Q  385 aatatgtgcctttggattaaataga-ttgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||| ||||||||| | |||| || |||||||||||| || | |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1297090 aatatgagccttttgattaaataaaattgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatatata 1297188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 477
Target Start/End: Complemental strand, 9275671 - 9275577
Alignment:
Q  385 aatatgtgcctttggattaaataga-ttgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatata 477  Q
    |||||| |||||| ||||||||| | |||| || |||||||||||| || | |||| ||||| ||||||||||||||||||||||||||||||||    
T  9275671 aatatgagccttttgattaaataaaattgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatata 9275577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 481
Target Start/End: Original strand, 12725619 - 12725680
Alignment:
Q  421 gatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||| || |||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  12725619 gatttggtgtcaacaaatccgttgacacctggtgtcaacggatcctaactcatatatatata 12725680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 481
Target Start/End: Original strand, 11751091 - 11751134
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  11751091 tcgttgacacctggtgtcaacggatcctaactcatatatatata 11751134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 20432391 - 20432433
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  20432391 cgttgatacctggtgtcaacggatcttaactcatatatatata 20432433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 29559421 - 29559485
Alignment:
Q  418 tgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | ||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  29559421 tgagatttggtgtcaacgaattcgttgacacctggtgtcaacagatcctaactcatatatatata 29559485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 22301224 - 22301181
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  22301224 tcgttgacacctggtgtcaacggatcctgactcatatatatata 22301181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 27177942 - 27177899
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  27177942 tcgttgacacctggtgtcaacggatcctatctcatatatatata 27177899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 478
Target Start/End: Original strand, 9276322 - 9276392
Alignment:
Q  409 attgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatat 478  Q
    ||||| || |||||||||||| || | ||| |||||| |||||||||||||||||||| ||||||||||||    
T  9276322 attgatggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactcatatatat 9276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 23857047 - 23857089
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||| ||||||||||||||||||||||||||||||||    
T  23857047 cgttgacaccaggtgtcaacggatcctaactcatatatatata 23857089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 29512422 - 29512358
Alignment:
Q  418 tgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || ||||| |||||| ||| |||||||||||||| | |||||||||||||||    
T  29512422 tgagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcatgactcatatatatata 29512358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 29719497 - 29719433
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||||| ||||||||||||||||||||  ||||||||||||||    
T  29719497 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatatata 29719433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 9540361 - 9540318
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||    
T  9540361 tcgttgacacctggtgtcaacggatcctgtctcatatatatata 9540318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 481
Target Start/End: Complemental strand, 15902174 - 15902107
Alignment:
Q  415 ggatgagatttggtgccatca-aatcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||| ||  | || |||||| ||||||||||||||||||||  ||||||||||||||    
T  15902174 ggatgagatttggtgtcaatataaccgttgacacctggtgtcaacggatcctgtctcatatatatata 15902107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 1296439 - 1296365
Alignment:
Q  409 attgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    ||||| || |||||||||||| || | ||| |||||| |||||||||||||||||||| |||| |||||||||||    
T  1296439 attgatggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactctatatatatata 1296365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 481
Target Start/End: Complemental strand, 11750313 - 11750243
Alignment:
Q  413 acggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    |||| |||||||||||| || | |||| ||||| |||||||||||| |||||||||||| |||||||||||    
T  11750313 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctaactctatatatatata 11750243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 474
Target Start/End: Original strand, 18174666 - 18174728
Alignment:
Q  413 acggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatat 474  Q
    |||| |||||||||||| || | ||| |||||| ||||| |||||||||||||||||||||||    
T  18174666 acggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaactcatat 18174728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 36238753 - 36238795
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||||| |||||| | ||||||||||||||    
T  36238753 cgttgatacctggtgtcaatggatcccatctcatatatatata 36238795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 15774262 - 15774190
Alignment:
Q  409 attgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| || |||||||||||| || ||||| |||||| ||| ||||||||||||||||| || |||||||||||    
T  15774262 attgatggttgagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcctatct-atatatatata 15774190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 481
Target Start/End: Original strand, 24121314 - 24121355
Alignment:
Q  440 gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| |||||||||||| ||||||| |||||||||||||||    
T  24121314 gttgacacctggtgtcaatggatcctgactcatatatatata 24121355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 19428188 - 19428220
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||| |||||||||||||||||    
T  19428188 tggtgtcaacggatcataactcatatatatata 19428220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 26752057 - 26752021
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatat 474  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  26752057 tcgttgacacctggtgtcaacggatcctgactcatat 26752021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 355 - 479
Target Start/End: Complemental strand, 46428300 - 46428175
Alignment:
Q  355 gaaaagctcacgcgagttcactacaccaacaatatgtgcctttggattaaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtg 453  Q
    ||||| ||||||| || |||||||||||  ||||||||||||||||||||||| || || || |||||||||||| || | ||| |||||| ||||||||    
T  46428300 gaaaacctcacgccagctcactacaccattaatatgtgcctttggattaaatatatagatggttgagatttggtgtcaacgaatccgttgacacctggtg 46428201  T
Q  454 tcaacggatcctaactcatatatata 479  Q
    |||||||||||| |||||||||||||    
T  46428200 tcaacggatcctgactcatatatata 46428175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 37950460 - 37950533
Alignment:
Q  409 attgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| ||||||||||||||| || | |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  37950460 attgatggatgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatatata 37950533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 3772522 - 3772592
Alignment:
Q  412 gacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| |||||||||||| || | ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  3772522 gacggttgagatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctaactcatatatatata 3772592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 27948505 - 27948432
Alignment:
Q  409 attgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| || |||||||||||| || | ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  27948505 attgaaggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcatatatatata 27948432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 25343387 - 25343295
Alignment:
Q  385 aatatgtgcctttggattaaataga-ttgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatata 475  Q
    |||||| |||||| ||||||||| | |||| || |||||||||||| || | |||| ||||| ||||||||||||||||||||||||||||||    
T  25343387 aatatgagccttttgattaaataaaattgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatata 25343295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 481
Target Start/End: Complemental strand, 25342581 - 25342482
Alignment:
Q  385 aatatgtgcctttggattaaataga-ttgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    |||||| |||||| ||||||||| | |||| || |||||||||||| || | |||| ||||| ||||||||||||||||||||||||| |||||||||||    
T  25342581 aatatgagccttttgattaaataaaattgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatatatata 25342482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 16664149 - 16664191
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  16664149 cgttgacacctggtgtcaacggatcctaactcatatatatata 16664191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 17638509 - 17638551
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17638509 cgttgacacctggtgtcaacggatcctaactcatatatatata 17638551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 425
Target Start/End: Original strand, 23902662 - 23902732
Alignment:
Q  355 gaaaagctcacgcgagttcactacaccaacaatatgtgcctttggattaaatagattgacggatgagattt 425  Q
    ||||| |||| || |||||| |||||||||||| ||||||||| |||||||||||| ||||| ||||||||    
T  23902662 gaaaaactcaagctagttcaatacaccaacaatctgtgccttttgattaaatagatagacggttgagattt 23902732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 30660652 - 30660578
Alignment:
Q  409 attgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    ||||| ||||||||||||||| || | |||| ||||| ||||||||||||||||||||||||| |||||||||||    
T  30660652 attgatggatgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatatatata 30660578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 37395523 - 37395565
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  37395523 cgttgacacctggtgtcaacggatcctaactcatatatatata 37395565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 45099917 - 45099959
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  45099917 cgttgacacctggtgtcaacggatcctgactcatatatatata 45099959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 481
Target Start/End: Original strand, 30661452 - 30661521
Alignment:
Q  413 acggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||||| || | |||| ||||| ||||||||||||||||||||  ||||||||||||||    
T  30661452 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatatata 30661521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 481
Target Start/End: Complemental strand, 33781622 - 33781585
Alignment:
Q  444 atacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  33781622 atacctgatgtcaacggatcctaactcatatatatata 33781585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 23902331 - 23902395
Alignment:
Q  110 atcgatatggtaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttct 174  Q
    |||||||||| || |||||||||||||||| ||||| | ||| ||||||||| ||| ||||||||    
T  23902331 atcgatatggaaaatctctatgagcaattttatggaaacgtgattttgaaattcgtcagtgttct 23902395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 45162019 - 45161955
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||| | |||||||||||| |||||||||||||||||||||||    
T  45162019 tgagatttggtgtcaacgaatccgttaacacctggtgtcaatggatcctaactcatatatatata 45161955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 481
Target Start/End: Complemental strand, 3688437 - 3688370
Alignment:
Q  415 ggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||| || | |||| ||||||| ||||||||||||||||||  ||||||||||||||    
T  3688437 ggataagatttggtgtcaacgaatccgttgatatctggtgtcaacggatcctgtctcatatatatata 3688370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 38225329 - 38225286
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| |||||||||||||||||| | |||||||||||||||    
T  38225329 tcgttgacacctggtgtcaacggatcatgactcatatatatata 38225286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 481
Target Start/End: Original strand, 47171437 - 47171472
Alignment:
Q  446 acctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||||| |||||||||||||||    
T  47171437 acctggtgtcaacggatcctgactcatatatatata 47171472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 3903363 - 3903405
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||||||||| ||| |||||||||||    
T  3903363 cgttgacacctggtgtcaacggatcctgacttatatatatata 3903405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 13785617 - 13785659
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  13785617 cgttgacacctggtgtcaacggatcctgtctcatatatatata 13785659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 14305118 - 14305076
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||| |||||||||||||||| ||||||||||||||    
T  14305118 cgttgacacctagtgtcaacggatcctatctcatatatatata 14305076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 19068419 - 19068461
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  19068419 cgttgacacctggtgtcaacggatcctgtctcatatatatata 19068461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 481
Target Start/End: Original strand, 24453730 - 24453792
Alignment:
Q  420 agatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||| || |||||| ||||| |||||||||||||| |||| | ||||||||||||||    
T  24453730 agatttggtgtcaacaaatccgttgacacctggtgtcaacgaatcccatctcatatatatata 24453792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 481
Target Start/End: Original strand, 18977746 - 18977834
Alignment:
Q  393 cctttggattaaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||| | ||||| || ||||||||||||  | | ||| |||||| |||||||||||| ||||||| ||| |||||||||||    
T  18977746 cctttggattaaaaaaattgatggttgagatttggtgttaacgaatccgttgacacctggtgtcaatggatcctgact-atatatatata 18977834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 481
Target Start/End: Complemental strand, 37706502 - 37706413
Alignment:
Q  394 ctttggattaaatagattgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    |||||||||||| | ||||| || ||| ||||||||  | | |||| |||||||||||||||||| ||||||| |||| |||||||||||    
T  37706502 ctttggattaaaaaaattgatggttgaaatttggtgttaacgaatccgttgatacctggtgtcaatggatcctgactctatatatatata 37706413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 40273630 - 40273557
Alignment:
Q  399 gattaaatagattga-cggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactc 470  Q
    |||||| |||||||| ||| |||||||||||| || | ||| | |||| |||||||||||||||||||||||||    
T  40273630 gattaattagattgaacggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctaactc 40273557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 7668532 - 7668469
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||||| |||||||||||||||||||| ||| |||||||||||    
T  7668532 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgact-atatatatata 7668469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 9749934 - 9749902
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| |||||||||||||||    
T  9749934 tggtgtcaacggatcctgactcatatatatata 9749902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 466
Target Start/End: Complemental strand, 14686184 - 14686132
Alignment:
Q  415 ggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatccta 466  Q
    ||||||||||||||| || |||||| ||||| || ||||||||||||||||||    
T  14686184 ggatgagatttggtgtcaacaaatccgttgacacttggtgtcaacggatccta 14686132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 478
Target Start/End: Complemental strand, 15305328 - 15305296
Alignment:
Q  446 acctggtgtcaacggatcctaactcatatatat 478  Q
    ||||||||||||||||| |||||||||||||||    
T  15305328 acctggtgtcaacggattctaactcatatatat 15305296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 481
Target Start/End: Original strand, 46428840 - 46428884
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||    
T  46428840 tcgttgacacctggtgtcaacggatcctgactctatatatatata 46428884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 470
Target Start/End: Original strand, 47785738 - 47785854
Alignment:
Q  355 gaaaagctcacgcgagttcactacaccaacaatatgtgcctttggattaaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtg 453  Q
    ||||| ||||||| || |||||||||||  ||||||||||||||||||||||| || || || |||||||||||| || | ||| |||||| ||||||||    
T  47785738 gaaaacctcacgccagctcactacaccattaatatgtgcctttggattaaatatatagatggttgagatttggtgtcaacgaatccgttgacacctggtg 47785837  T
Q  454 tcaacggatcctaactc 470  Q
    ||||| |||||| ||||    
T  47785838 tcaacagatcctgactc 47785854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 26147025 - 26147098
Alignment:
Q  409 attgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| || |||||||||||| || | ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  26147025 attgaaggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcatatatatata 26147098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 415 - 480
Target Start/End: Original strand, 2446160 - 2446226
Alignment:
Q  415 ggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatat 480  Q
    |||||||||||||||  | | |||| ||||| |||||||||||||||||||||||||||||||||||    
T  2446160 ggatgagatttggtgttaacgaatctgttgacacctggtgtcaacggatcctaactcatatatatat 2446226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 31329741 - 31329783
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  31329741 cgttgacacctggtgtcaacggatcctgactcatatatatata 31329783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 481
Target Start/End: Original strand, 47688476 - 47688546
Alignment:
Q  413 acggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    |||| |||||||||||| || | |||| ||||| ||||||||||||||||||||||||| |||||||||||    
T  47688476 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatatatata 47688546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 53773610 - 53773652
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  53773610 cgttgacacctgatgtcaacggatcctaactcatatatatata 53773652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 481
Target Start/End: Complemental strand, 7841600 - 7841531
Alignment:
Q  413 acggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| || | |||| ||| | ||||| |||||||||||||| |||||||||||||||    
T  7841600 acggatgagatttggtgtcaacgaatccgttaacacctgatgtcaacggatcctgactcatatatatata 7841531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 481
Target Start/End: Original strand, 12920271 - 12920340
Alignment:
Q  413 acggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||||| || | |||| ||| ||||||||||||||| ||||||| ||||||||||||||    
T  12920271 acggttgagatttggtgtcaacgaatctgttaatacctggtgtcaaccgatcctatctcatatatatata 12920340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 481
Target Start/End: Original strand, 20774177 - 20774246
Alignment:
Q  413 acggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||||| || | |||| ||||| |||||||||||| ||||||| |||||||||||||||    
T  20774177 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcatatatatata 20774246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 440 - 481
Target Start/End: Complemental strand, 40495123 - 40495082
Alignment:
Q  440 gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| |||||||||||||||||||| |||||||||||||||    
T  40495123 gttgacacctggtgtcaacggatcctgactcatatatatata 40495082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 446 - 479
Target Start/End: Complemental strand, 47687931 - 47687898
Alignment:
Q  446 acctggtgtcaacggatcctaactcatatatata 479  Q
    ||||||||||||||||||||||||||||||||||    
T  47687931 acctggtgtcaacggatcctaactcatatatata 47687898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 46169014 - 46169046
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||||||||||||||||||    
T  46169014 tggtgtcaacggatcctaactcatatatatata 46169046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 481
Target Start/End: Original strand, 142547 - 142590
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||    
T  142547 tcgttgacacccggtgtcaacggatcctatctcatatatatata 142590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 52871356 - 52871285
Alignment:
Q  411 tgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||| ||||||||| || | |||| ||||| |||||||||||||||||| |||||||| ||| ||||    
T  52871356 tgacggatgtgatttggtgtcaacgaatccgttgacacctggtgtcaacggatcttaactcatttatctata 52871285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 53772836 - 53772793
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    |||||| ||||||||||||||||||||||||| |||||||||||    
T  53772836 cgttgacacctggtgtcaacggatcctaactctatatatatata 53772793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 5046455 - 5046533
Alignment:
Q  389 tgtgcctttggattaaatagattgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatccta 466  Q
    |||||| || |||||| || || || |||| |||||||||| || | |||| |||||||||||||||||||||||||||    
T  5046455 tgtgccattagattaattaaatagatggattagatttggtgtcaacgaatctgttgatacctggtgtcaacggatccta 5046533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 8248544 - 8248586
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| | |||||||||||||||||| |||||||||||||||    
T  8248544 cgttgacatctggtgtcaacggatcctgactcatatatatata 8248586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 8266209 - 8266251
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| | |||||||||||||||||| |||||||||||||||    
T  8266209 cgttgacatctggtgtcaacggatcctgactcatatatatata 8266251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 12368679 - 12368721
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||| ||||||||||||||| |||||||||||||||    
T  12368679 cgttgacacctagtgtcaacggatcctgactcatatatatata 12368721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 464
Target Start/End: Original strand, 16903630 - 16903692
Alignment:
Q  403 aaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcc 464  Q
    |||||||||||||| |||||||||||| || | ||| |||||| |||||||||||||| ||||    
T  16903630 aaatagattgacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 16903692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 16903692 - 16903734
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||| ||||| |||||||||||||||    
T  16903692 cgttgacacctggtgtcaacgaatcctgactcatatatatata 16903734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 481
Target Start/End: Original strand, 43147273 - 43147303
Alignment:
Q  451 gtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||||||||||||||||    
T  43147273 gtgtcaacggatcctaactcatatatatata 43147303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 53732464 - 53732422
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  53732464 cgttgacacctggtgtcaacggatcctgtctcatatatatata 53732422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 11938771 - 11938698
Alignment:
Q  409 attgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| || |||||||||||| || | ||| |||||| ||||||||| ||| ||||||||| ||||||||||||    
T  11938771 attgaaggttgagatttggtgtcaacgaattcgttgacacctggtgtgaacagatcctaacacatatatatata 11938698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 32089591 - 32089668
Alignment:
Q  394 ctttggattaaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactc 470  Q
    |||||||||||| | || |||||||| ||||||||  || | ||| |||||| | |||||||||||||||||||||||    
T  32089591 ctttggattaaaaaaatagacggatgtgatttggtatcaacgaattcgttgacatctggtgtcaacggatcctaactc 32089668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 56262554 - 56262481
Alignment:
Q  393 cctttggattaaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcct 465  Q
    ||||||||||||| | || ||||| |||||||||||| || | ||| | |||| ||||||||||||||||||||    
T  56262554 cctttggattaaaaatatagacggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcct 56262481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 1466027 - 1466059
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| |||||||||||||||    
T  1466027 tggtgtcaacggatcctgactcatatatatata 1466059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 3654052 - 3654020
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||| ||||||||||||||    
T  3654052 tggtgtcaacggatcctatctcatatatatata 3654020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 481
Target Start/End: Original strand, 5591057 - 5591097
Alignment:
Q  441 ttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||||||||||| | |||||||||||||||    
T  5591057 ttgacacctggtgtcaacggatcttgactcatatatatata 5591097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 24008412 - 24008380
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| |||||||||||||||    
T  24008412 tggtgtcaacggatcctgactcatatatatata 24008380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 44470160 - 44470192
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| |||||||||||||||    
T  44470160 tggtgtcaacggatcctgactcatatatatata 44470192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 481
Target Start/End: Complemental strand, 48127313 - 48127273
Alignment:
Q  441 ttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| |||||||||||||||||| | |||||||||||||||    
T  48127313 ttgacacctggtgtcaacggatcttgactcatatatatata 48127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 261 - 429
Target Start/End: Complemental strand, 29854159 - 29853983
Alignment:
Q  261 gtgtaattgaaatcgatgaacaggacatacatgcttccactgtttgct--------tcctttgttcctcataacacattcagcggcaaaacattgcatga 352  Q
    |||||||||||||| ||| ||| |||| |||||||||||| |||||||        ||| ||||| ||||||||||| ||| ||||| ||| ||   |      
T  29854159 gtgtaattgaaatccatggacatgacacacatgcttccaccgtttgctactttgtttcccttgtttctcataacacactcaacggcagaacgttaggtag 29854060  T
Q  353 aagaaaagctcacgcgagttcactacaccaacaatatgtgcctttggattaaatagattgacggatgagatttggtg 429  Q
    | ||||| ||||||| ||||||||||||||| ||| |||||||||  ||||||||||| ||||| ||||||||||||    
T  29854059 aggaaaaactcacgctagttcactacaccaataatttgtgccttttaattaaatagatagacggttgagatttggtg 29853983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 13477087 - 13477044
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  13477087 tcgttgacacctggtgtcaacggatcctgactcatatatatata 13477044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 48648232 - 48648190
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  48648232 cgttgacacctggtgtcaacggatcctgactcatatatatata 48648190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 440 - 481
Target Start/End: Complemental strand, 6775296 - 6775255
Alignment:
Q  440 gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  6775296 gttgatatttggtgtcaacggatcctaactcatatatatata 6775255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 480
Target Start/End: Complemental strand, 14871206 - 14871141
Alignment:
Q  416 gatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatat 480  Q
    |||||||||||||| || | ||| |||||| |||||||||||||||||||| |||| |||||||||    
T  14871206 gatgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactcttatatatat 14871141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 29854430 - 29854365
Alignment:
Q  109 aatcgatatggtaattctctatgagcaatttcatggataagtgtttttgaaatccgttagtgttct 174  Q
    ||||||||||| || |||||||||||||||| ||||| | ||| ||||||||| ||| ||||||||    
T  29854430 aatcgatatggaaaatctctatgagcaattttatggaaacgtgattttgaaattcgtcagtgttct 29854365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 481
Target Start/End: Original strand, 37988195 - 37988284
Alignment:
Q  393 cctttggattaaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| ||||||| | ||| | || |||||||||||| || | ||| |||||| |||||||||||| ||||||| |||||||||||||||    
T  37988195 cctttagattaaaaatattaatggctgagatttggtgtcaacgaattcgttgacacctggtgtcaatggatcctgactcatatatatata 37988284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 20213010 - 20212967
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||||||||||||||||| || |||||||||||||||    
T  20213010 tcgttgacacctggtgtcaacggattctgactcatatatatata 20212967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 54458640 - 54458731
Alignment:
Q  392 gcctttggattaa-atagattgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||| ||| || ||||||   ||||||||| || | |||| ||||| ||| |||||||||||||||||| |||||||||||||    
T  54458640 gcctttggattaacataaatggacggaaaggatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcctaattcatatatatata 54458731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 438 - 480
Target Start/End: Complemental strand, 8949965 - 8949923
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatat 480  Q
    ||||||| || ||||||||||||||||||||| ||||||||||    
T  8949965 tcgttgacacatggtgtcaacggatcctaacttatatatatat 8949923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 21726796 - 21726754
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  21726796 cgttgacacctggtgtcaacggatcctgtctcatatatatata 21726754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 21727553 - 21727595
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  21727553 cgttgacacctggtgtcaacggatcctgtctcatatatatata 21727595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 48764534 - 48764464
Alignment:
Q  412 gacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| |||||||||||| || | ||| |||||| ||||| |||||| ||||||| |||||||||||||||    
T  48764534 gacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaatggatcctgactcatatatatata 48764464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 48507009 - 48507082
Alignment:
Q  393 cctttggattaaatagattgacggatgagatttggtgccatc-aaatcgttgatacctggtgtcaacggatcct 465  Q
    ||||||||||||| | || ||||| |||||||||||| || | || || |||| ||||||||||||||||||||    
T  48507009 cctttggattaaaaatatagacggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcct 48507082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 52605506 - 52605543
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatata 475  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  52605506 tcgttgacacctggtgtcaacggatcctgactcatata 52605543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 264517 - 264454
Alignment:
Q  418 tgagatttggtgccatcaaatcg-ttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || ||||||  |||| |||||||||||| ||||||||||| |||||||||||    
T  264517 tgagatttggtgtcaacaaatccattgacacctggtgtcaatggatcctaact-atatatatata 264454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 23706765 - 23706868
Alignment:
Q  379 accaacaatatgtgcctttggattaaataga-ttgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatat 476  Q
    ||||| ||| |||||| ||||||| |||| | |||| || |||||||||||| || | |||  ||||| ||||| ||||||||||| |||||||||||||    
T  23706765 accaaaaatctgtgccattggattgaataaaattgatggttgagatttggtgtcaacgaatatgttgacacctg-tgtcaacggattctaactcatatat 23706863  T
Q  477 atata 481  Q
    |||||    
T  23706864 atata 23706868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 23725221 - 23725324
Alignment:
Q  379 accaacaatatgtgcctttggattaaataga-ttgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatat 476  Q
    ||||| ||| |||||| ||||||| |||| | |||| || |||||||||||| || | |||  ||||| ||||| ||||||||||| |||||||||||||    
T  23725221 accaaaaatctgtgccattggattgaataaaattgatggttgagatttggtgtcaacgaatatgttgacacctg-tgtcaacggattctaactcatatat 23725319  T
Q  477 atata 481  Q
    |||||    
T  23725320 atata 23725324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 23743677 - 23743780
Alignment:
Q  379 accaacaatatgtgcctttggattaaataga-ttgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatat 476  Q
    ||||| ||| |||||| ||||||| |||| | |||| || |||||||||||| || | |||  ||||| ||||| ||||||||||| |||||||||||||    
T  23743677 accaaaaatctgtgccattggattgaataaaattgatggttgagatttggtgtcaacgaatatgttgacacctg-tgtcaacggattctaactcatatat 23743775  T
Q  477 atata 481  Q
    |||||    
T  23743776 atata 23743780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 31115601 - 31115665
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||||| |||| ||||||||||||||  |||||||||||||||    
T  31115601 tgagatttggtgtcaacgaatctgttgacacctagtgtcaacggatcccgactcatatatatata 31115665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 31974702 - 31974638
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||||| || |||||||||||||||||| || |||||||||||    
T  31974702 tgagatttggtgtcaacgaatccgttgacacttggtgtcaacggatcctatcttatatatatata 31974638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 476
Target Start/End: Original strand, 43202830 - 43202858
Alignment:
Q  448 ctggtgtcaacggatcctaactcatatat 476  Q
    |||||||||||||||||||||||||||||    
T  43202830 ctggtgtcaacggatcctaactcatatat 43202858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 481
Target Start/End: Original strand, 38576269 - 38576367
Alignment:
Q  385 aatatgtgcctttggattaaataga-ttgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||| ||||||||| | |||| || |||||||||||| || | |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  38576269 aatatgagccttttgattaaataaaattgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatatata 38576367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 8996966 - 8997039
Alignment:
Q  409 attgacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| || |||||||||||| || |||||| ||||| ||||||| |||||||||||| |||||||||||||||    
T  8996966 attgatggttgagatttggtgtcaacaaatcagttgacacctggtatcaacggatcctgactcatatatatata 8997039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 41974691 - 41974627
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||||| |||||||||||||||||||| |||||||||||||||    
T  41974691 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatata 41974627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 27441496 - 27441453
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  27441496 tcgttgacacctggtgtcaacggatcctatctcatatatatata 27441453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 481
Target Start/End: Original strand, 27442163 - 27442206
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  27442163 tcgttgacacctggtgtcaacggatcctgactcatatatatata 27442206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 31602090 - 31602014
Alignment:
Q  396 ttggattaaatagatt-gacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactc 470  Q
    |||||||||||| ||| ||||| |||||||||||| || | ||| |||||| ||||||||||||| |||||||||||    
T  31602090 ttggattaaataaattagacggttgagatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctaactc 31602014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 9197125 - 9197082
Alignment:
Q  438 tcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||| ||||||||||||||||| || |||||||||||||||    
T  9197125 tcgttgacacctggtgtcaacggattctgactcatatatatata 9197082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 3165145 - 3165187
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||| |||||||||||||| |||||||||||||||    
T  3165145 cgttgacacctgatgtcaacggatcctgactcatatatatata 3165187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 3291557 - 3291599
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| | ||||||||||| ||||||||||||||||||||||    
T  3291557 cgttgacatctggtgtcaacagatcctaactcatatatatata 3291599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 31642082 - 31642152
Alignment:
Q  412 gacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| |||||||||||| || | ||| |||||| | |||||||||| ||||||| |||||||||||||||    
T  31642082 gacggttgagatttggtgtcaacgaattcgttgacatctggtgtcaatggatcctgactcatatatatata 31642152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 481
Target Start/End: Complemental strand, 39860138 - 39860097
Alignment:
Q  440 gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| ||||||||||||||||||||  ||||||||||||||    
T  39860138 gttgacacctggtgtcaacggatcctgcctcatatatatata 39860097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 475
Target Start/End: Complemental strand, 14825672 - 14825636
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatata 475  Q
    |||||| |||| |||||||||||||||||||||||||    
T  14825672 cgttgacacctagtgtcaacggatcctaactcatata 14825636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 14826195 - 14826227
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||| ||||||||||||||    
T  14826195 tggtgtcaacggatcctatctcatatatatata 14826227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 28930864 - 28930896
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| |||||||||||||||    
T  28930864 tggtgtcaacggatcctgactcatatatatata 28930896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 32979091 - 32979059
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| |||||||||||||||    
T  32979091 tggtgtcaacggatcctgactcatatatatata 32979059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 481
Target Start/End: Complemental strand, 37064891 - 37064804
Alignment:
Q  394 ctttggattaaatagattgacggatgagatttggtgcca-tcaaatcgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| ||||||| | |||||||| || ||||||||| || | || ||||||| ||||||||||||| |||||| ||| |||||||||||    
T  37064891 cttttgattaaaaaaattgacggttgtgatttggtgtcaatgaattcgttgacacctggtgtcaacagatcctgact-atatatatata 37064804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 26528879 - 26528809
Alignment:
Q  412 gacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| |||||||||||| || | ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  26528879 gacggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactcatatatatata 26528809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 10171332 - 10171262
Alignment:
Q  412 gacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| |||||||||||| || | |||| ||||| |||||||||||||||||||| |||||||||||||||    
T  10171332 gacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatata 10171262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 481
Target Start/End: Complemental strand, 25060843 - 25060802
Alignment:
Q  440 gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  25060843 gttgacacctggtgtcaacggatcctaactcatatatatata 25060802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 19311051 - 19310987
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || |||||| ||| | |||||||||||||||||||| |||||||||||||||    
T  19311051 tgagatttggtgtcaacaaatccgttaacacctggtgtcaacggatcctgactcatatatatata 19310987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 10171961 - 10172032
Alignment:
Q  412 gacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    ||||| |||||||||||| || | ||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  10171961 gacggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactctatatatatata 10172032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 12344950 - 12344880
Alignment:
Q  412 gacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| |||||||||||  || | |||| ||||| |||||||||||| |||||||||||||||||||||||    
T  12344950 gacggttgagatttggtatcaacgaatctgttgacacctggtgtcaatggatcctaactcatatatatata 12344880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 19323768 - 19323832
Alignment:
Q  418 tgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | ||| |||||| ||||||||||||||||||||  ||||||||||||||    
T  19323768 tgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgtctcatatatatata 19323832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 21133260 - 21133292
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||||||||||||||||||    
T  21133260 tggtgtcaacggatcctaactcatatatatata 21133292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 25061583 - 25061615
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||||||||||||||||||    
T  25061583 tggtgtcaacggatcctaactcatatatatata 25061615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 26529508 - 26529579
Alignment:
Q  412 gacggatgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    ||||| |||||||||||| || | |||| ||||| |||||||||||||||||||| |||| |||||||||||    
T  26529508 gacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatatatata 26529579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 481
Target Start/End: Complemental strand, 33435357 - 33435326
Alignment:
Q  450 ggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||||||||||||||||||    
T  33435357 ggtgtcaacggatcctaactcatatatatata 33435326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 481
Target Start/End: Complemental strand, 18227751 - 18227718
Alignment:
Q  448 ctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||||||||| |||||||||||||||    
T  18227751 ctggtgtcaacggatcctgactcatatatatata 18227718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 4940258 - 4940290
Alignment:
Q  449 tggtgtcaacggatcctaactcatatatatata 481  Q
    ||||||||||||||||| |||||||||||||||    
T  4940258 tggtgtcaacggatcctgactcatatatatata 4940290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 481
Target Start/End: Original strand, 5385 - 5445
Alignment:
Q  422 atttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||| || |||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  5385 atttggtgtcaacaaatccgttgacacctggtgtcaacggatcctgactcatatatatata 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 481
Target Start/End: Original strand, 428888 - 428968
Alignment:
Q  403 aaatagattgacggatgagatttggtgccatcaaat-cgttgatacctggtgtcaacggatcctaactc-atatatatata 481  Q
    |||||||||| ||| |||||||||||| || | ||| |||||||||| |||||||||||||||| |||| |||||||||||    
T  428888 aaatagattggcggttgagatttggtgtcaacgaattcgttgataccgggtgtcaacggatcctgactctatatatatata 428968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 26620 - 26578
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  26620 cgttgacacctggtgtcaacggatcctgactcatatatatata 26578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 481
Target Start/End: Original strand, 27552 - 27592
Alignment:
Q  441 ttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||| ||||||||||||||||||||  ||||||||||||||    
T  27552 ttgacacctggtgtcaacggatcctgtctcatatatatata 27592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 481
Target Start/End: Original strand, 8315 - 8357
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  8315 cgttgacacctggtgtcaatggatcctaactcatatatatata 8357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 440 - 481
Target Start/End: Original strand, 6909 - 6950
Alignment:
Q  440 gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    ||||| |||||||||||||||||||| |||||||||||||||    
T  6909 gttgacacctggtgtcaacggatcctgactcatatatatata 6950  T

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Target: scaffold2007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 801 - 737
Alignment:
Q  418 tgagatttggtgccatcaaatc-gttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||||||||| || | |||| ||||| |||||||||||| ||||||| |||||||||||||||    
T  801 tgagatttggtgtcaacgaatccgttgaaacctggtgtcaatggatcctgactcatatatatata 737  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 39924 - 39882
Alignment:
Q  439 cgttgatacctggtgtcaacggatcctaactcatatatatata 481  Q
    |||||| ||||||||||||||||| || |||||||||||||||    
T  39924 cgttgacacctggtgtcaacggattctgactcatatatatata 39882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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