View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7912_low_3 (Length: 586)
Name: NF7912_low_3
Description: NF7912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7912_low_3 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 528; Significance: 0; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 528; E-Value: 0
Query Start/End: Original strand, 10 - 569
Target Start/End: Complemental strand, 13373352 - 13372793
Alignment:
| Q |
10 |
aagaatattgatggaacaatcacatatggaggctactctgataccatggttgccgacgaacacttcttgatccgtattcctgatgccttaccacttgatg |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
13373352 |
aagaatattgatggaacaatcacatatggaggctactctgataccatggttgcccacgaacacttcgtgatccgtattcctgatgccttaccacttgatg |
13373253 |
T |
 |
| Q |
110 |
ccgctgctcctcttctttgtgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttgg |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13373252 |
ccgctgctcctcttctttgtgcggggatcacagtatatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttgg |
13373153 |
T |
 |
| Q |
210 |
tggattaggtcatatggctgtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagccattgaacac |
309 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13373152 |
tggattaggtcatatggctgtgaaatttaccaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagccattgaacac |
13373053 |
T |
 |
| Q |
310 |
ttaggagctgactcatttgtggttagccacgaacaagaccaaatgcaggtgcgtaccaatagctcgcttttaataactaatctatatatgaaatcagtta |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13373052 |
ttaggagctgactcatttgtggttagccacgaacaagaccaaatgcaggtgcgtaccaatagctcgcttttaataactaatctatatatgaaatcagtta |
13372953 |
T |
 |
| Q |
410 |
taaacttctaacactgttcattatgttataggctgtaatggacacccttgatggtattattgacactgtttcagcactccatccactaatgcccttgatg |
509 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13372952 |
taaacttctaacactgttcattatgttataggctgtaatgggcacctttgatggtattattgacactgtttcagcactccatccactaatgcccttgatg |
13372853 |
T |
 |
| Q |
510 |
ggtttattgaagaatcatggtaaacttgttatggttggagctccagaaaagcctttggag |
569 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
13372852 |
ggtttattgaagaatcatggtaaacttgttatggttggagctccagagaagcctttggag |
13372793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 10 - 390
Target Start/End: Complemental strand, 13379148 - 13378768
Alignment:
| Q |
10 |
aagaatattgatggaacaatcacatatggaggctactctgataccatggttgccgacgaacacttcttgatccgtattcctgatgccttaccacttgatg |
109 |
Q |
| |
|
|||||| ||||||| || ||||||||||||||||||||||| |||||||||| |||||||||||| | |||||||||| ||||||||| ||||||||| |
|
|
| T |
13379148 |
aagaatgttgatggcactatcacatatggaggctactctgacaccatggttgtcgacgaacactttattgtccgtattcccgatgccttatcacttgatg |
13379049 |
T |
 |
| Q |
110 |
ccgctgctcctcttctttgtgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttgg |
209 |
Q |
| |
|
| || |||||||| |||||||| |||||||||||||||||||| ||||| |||||||| || |||| ||||| | ||| | ||||||||||||||||| |
|
|
| T |
13379048 |
ctgccgctcctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttggatttgacaaacctggactgcatataggtgtggttggtcttgg |
13378949 |
T |
 |
| Q |
210 |
tggattaggtcatatggctgtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagccattgaacac |
309 |
Q |
| |
|
|||||||||||||||||||||||| || | |||||| ||||||| ||| ||||| ||| |||| |||||||||||||||||||||||||||||||||| | |
|
|
| T |
13378948 |
tggattaggtcatatggctgtgaagttcgccaaagcctttggtgttaaggtaactgtggtaagtacttctcctaacaaaaagaaggaagccattgaacgc |
13378849 |
T |
 |
| Q |
310 |
ttaggagctgactcatttgtggttagccacgaacaagaccaaatgcaggtgcgtaccaatagctcgcttttaataactaat |
390 |
Q |
| |
|
||||||||||||||||| |||||||| | |||||||||||| ||| ||||||||||||||| ||||||||||| |||||| |
|
|
| T |
13378848 |
ttaggagctgactcattcgtggttagtcgcgaacaagaccagatgaaggtgcgtaccaataattcgcttttaatgactaat |
13378768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 424 - 570
Target Start/End: Complemental strand, 13378693 - 13378547
Alignment:
| Q |
424 |
tgttcattatgttataggctgtaatggacacccttgatggtattattgacactgtttcagcactccatccactaatgcccttgatgggtttattgaagaa |
523 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||||||| || || ||||||||||||||||||||||| |||||||| ||| | ||| |||||||||| |
|
|
| T |
13378693 |
tgttcaatatgttataggctgtaatgggaacgtttgatggaatcatcgacactgtttcagcactccatcctctaatgcctttgcttggtctattgaagaa |
13378594 |
T |
 |
| Q |
524 |
tcatggtaaacttgttatggttggagctccagaaaagcctttggagt |
570 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
13378593 |
taatggtaaacttgttatggttggagctccagagaagcctttggagt |
13378547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 85 - 327
Target Start/End: Original strand, 13385391 - 13385633
Alignment:
| Q |
85 |
attcctgatgccttaccacttgatgccgctgctcctcttctttgtgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtt |
184 |
Q |
| |
|
|||||||||| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| || ||| | | ||| |||||||| |||| |||||| |
|
|
| T |
13385391 |
attcctgatggattaccacttgaagctgctgcacctctcctttgtgctgggatcactgtgtacagtcctcttagatactttggactcgacaaacctggtc |
13385490 |
T |
 |
| Q |
185 |
tacatgtgggtgtggttggtcttggtggattaggtcatatggctgtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaa |
284 |
Q |
| |
|
| ||||| ||||| |||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||| || || || || || ||| ||| |
|
|
| T |
13385491 |
ttcatgtcggtgttgttggtcttggtgggcttggtcacatggctgtgaaatttgccaaagcttttggtgctaatgtgaccgtaattagtacatctgctag |
13385590 |
T |
 |
| Q |
285 |
caaaaagaaggaagccattgaacacttaggagctgactcattt |
327 |
Q |
| |
|
|||| | |||||||| | ||||||||||||||||| |||||| |
|
|
| T |
13385591 |
caaagaaaaggaagcaaaagaacacttaggagctgattcattt |
13385633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 29 - 323
Target Start/End: Complemental strand, 13419591 - 13419297
Alignment:
| Q |
29 |
tcacatatggaggctactctgataccatggttgccgacgaacacttcttgatccgtattcctgatgccttaccacttgatgccgctgctcctcttctttg |
128 |
Q |
| |
|
||||||||||||| ||||| || | |||||||| ||||| ||||| |||| || ||||||||| |||||| |||||||| || | |||||||||||| |
|
|
| T |
13419591 |
tcacatatggaggttactccgactcaatggttgcagacgagcactttgtgattcgcattcctgatagcttacctcttgatgctgccggtcctcttctttg |
13419492 |
T |
 |
| Q |
129 |
tgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttggtggattaggtcatatggct |
228 |
Q |
| |
|
|| || |||||||||||||| ||| | | |||||| ||| ||||||||||| | || | ||||| ||||||||||||||| | || ||||||||| |
|
|
| T |
13419491 |
cgctggaatcacagtgtatagtcctcttcgacattttgaactcgacaagcctggtatgaatataggtgttgttggtcttggtggacttggccatatggct |
13419392 |
T |
 |
| Q |
229 |
gtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagccattgaacacttaggagctgactc |
323 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| || || || || || || ||| ||||| | |||||||| || |||||||| ||||||||||| |
|
|
| T |
13419391 |
gtgaaatttgcaaaagctttcggtgctaatgtgaccgtaattagtacatcgcctcacaaagaaaaggaagcaatagaacacttgggagctgactc |
13419297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 162 - 327
Target Start/End: Complemental strand, 13413113 - 13412948
Alignment:
| Q |
162 |
ttttggacttaacaagcctggtttacatgtgggtgtggttggtcttggtggattaggtcatatggctgtgaaatttggcaaagcttttggtgctaatgta |
261 |
Q |
| |
|
||||||||| | ||||||||||||||| | ||||| ||||||||||||||| | || ||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
13413113 |
ttttggactcgataagcctggtttacatataggtgttgttggtcttggtggacttggccatatggctgtgaaatttgccaaagctttcggtgctaatgtt |
13413014 |
T |
 |
| Q |
262 |
acagtgataagcacttctcctaacaaaaagaaggaagccattgaacacttaggagctgactcattt |
327 |
Q |
| |
|
|| || || || || || ||||||||| | |||||||| || ||||||||||||||||| |||||| |
|
|
| T |
13413013 |
accgtaattagtacatcgcctaacaaagaaaaggaagcaatagaacacttaggagctgattcattt |
13412948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 85 - 327
Target Start/End: Original strand, 13389212 - 13389454
Alignment:
| Q |
85 |
attcctgatgccttaccacttgatgccgctgctcctcttctttgtgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtt |
184 |
Q |
| |
|
|||||||||| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| || ||| | | ||||| |||||| | || |||||| |
|
|
| T |
13389212 |
attcctgatggattaccacttgaagctgctgcacctctcctttgtgctgggatcactgtgtacagtcctcttagatattatggactcgataaacctggtc |
13389311 |
T |
 |
| Q |
185 |
tacatgtgggtgtggttggtcttggtggattaggtcatatggctgtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaa |
284 |
Q |
| |
|
| | | | ||||| |||||||||||||| | ||||| |||||||||||||||| |||||| |||||||| | |||||||||||| || || || || || |
|
|
| T |
13389312 |
ttcgtataggtgttgttggtcttggtgggcttggtcacatggctgtgaaatttgccaaagcatttggtgcgattgtaacagtgattagtacatcacccaa |
13389411 |
T |
 |
| Q |
285 |
caaaaagaaggaagccattgaacacttaggagctgactcattt |
327 |
Q |
| |
|
|||| |||| ||||| || |||||||||||||| || |||||| |
|
|
| T |
13389412 |
caaagagaaagaagcaatagaacacttaggagccgattcattt |
13389454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 323
Target Start/End: Complemental strand, 13426482 - 13426188
Alignment:
| Q |
29 |
tcacatatggaggctactctgataccatggttgccgacgaacacttcttgatccgtattcctgatgccttaccacttgatgccgctgctcctcttctttg |
128 |
Q |
| |
|
||||||||||||| || || || | |||||||| || || ||||| |||| || ||||||||| |||||| ||||||| || | |||||||||||| |
|
|
| T |
13426482 |
tcacatatggaggttattccgactcaatggttgcagatgagcactttgtgattcgcattcctgatagcttacctcttgatgttgccggtcctcttctttg |
13426383 |
T |
 |
| Q |
129 |
tgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttggtggattaggtcatatggct |
228 |
Q |
| |
|
|| || ||||||||||||| ||| | ||||| ||| ||||||||||| | || | || || ||||||||||||||| | |||||||||||| |
|
|
| T |
13426382 |
cgctggagtcacagtgtatagtcctcttcgtcattttcaactcgacaagcctggtatgaatataggcgttgttggtcttggtggacttggtcatatggct |
13426283 |
T |
 |
| Q |
229 |
gtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagccattgaacacttaggagctgactc |
323 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||| || || || || |||| |||| | |||||||| || ||||| |||||||||||||| |
|
|
| T |
13426282 |
gtgaaattcgccaaagcttttggtgctaatgtaacagtaattagtacatcgcctagcaaagaaaaggaagcgatagaacatttaggagctgactc |
13426188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 18 - 327
Target Start/End: Original strand, 13393552 - 13393861
Alignment:
| Q |
18 |
tgatggaacaatcacatatggaggctactctgataccatggttgccgacgaacacttcttgatccgtattcctgatgccttaccacttgatgccgctgct |
117 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| | |||||||| || || ||||| | | | |||||||||| |||||||||||| | |||||| |
|
|
| T |
13393552 |
tgatggaagcatcacatatggagggtactctgactcaatggttgcagatgagcactttatagttcacattcctgatggcttaccacttgaatctgctgct |
13393651 |
T |
 |
| Q |
118 |
cctcttctttgtgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttggtggattag |
217 |
Q |
| |
|
||||| |||||||| || || || |||||||| ||| | |||||||||||| ||||||||||| | || | ||| | ||||||||||||||| | | |
|
|
| T |
13393652 |
cctctcctttgtgccggtattactgtgtatagtcctcttcgatattttggactcgacaagcctggtatgaatataggtattgttggtcttggtggacttg |
13393751 |
T |
 |
| Q |
218 |
gtcatatggctgtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagccattgaacacttaggagc |
317 |
Q |
| |
|
|||| ||| |||||| |||| ||||||||||| |||||||||||||| || || || || || |||||| |||| ||||| || ||| || ||||||| |
|
|
| T |
13393752 |
gtcacttgggtgtgaagtttgcaaaagcttttggagctaatgtaacagtaattagtacatcacccaacaaagagaaagaagcaatagaaaacctaggagc |
13393851 |
T |
 |
| Q |
318 |
tgactcattt |
327 |
Q |
| |
|
||| |||||| |
|
|
| T |
13393852 |
tgattcattt |
13393861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 18 - 323
Target Start/End: Complemental strand, 13447153 - 13446848
Alignment:
| Q |
18 |
tgatggaacaatcacatatggaggctactctgataccatggttgccgacgaacacttcttgatccgtattcctgatgccttaccacttgatgccgctgct |
117 |
Q |
| |
|
|||||| || ||||| |||||||| | ||| || | |||||||| ||||| ||||| |||| || ||||||||| |||||| ||||||| || | | |
|
|
| T |
13447153 |
tgatggcactatcacctatggaggtttctccgactcaatggttgcagacgagcactttgtgattcgcattcctgatagcttacctcttgatggtgccggt |
13447054 |
T |
 |
| Q |
118 |
cctcttctttgtgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttggtggattag |
217 |
Q |
| |
|
||||||||||| || || ||||||||||||| ||| | | |||||||||| ||||||||||| | || | || || ||||||||||||||| | | |
|
|
| T |
13447053 |
cctcttctttgcgctggagtcacagtgtatagtcctcttcgacattttggactcgacaagcctggtatgaatataggagttgttggtcttggtggacttg |
13446954 |
T |
 |
| Q |
218 |
gtcatatggctgtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagccattgaacacttaggagc |
317 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| || || || || || || || ||||| || | |||||||| || |||||||||||||| |
|
|
| T |
13446953 |
gtcatatggctgtgaaatttgctaaagcttttggtgctaaagtgaccgtaattagtacgtcgcctaaaaaggaaaaggaagcaatagaacacttaggagc |
13446854 |
T |
 |
| Q |
318 |
tgactc |
323 |
Q |
| |
|
||||| |
|
|
| T |
13446853 |
agactc |
13446848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 327
Target Start/End: Complemental strand, 13454106 - 13453797
Alignment:
| Q |
18 |
tgatggaacaatcacatatggaggctactctgataccatggttgccgacgaacacttcttgatccgtattcctgatgccttaccacttgatgccgctgct |
117 |
Q |
| |
|
||||||||| | ||| ||||||||| |||||| | |||||| ||||||| ||||| || | || ||||| ||| ||||| |||||||| |||||| |
|
|
| T |
13454106 |
tgatggaaccagcactcatggaggcttctctgactcaatggtttccgacgagcactttgtgtttcgcattccagatcagttacctcttgatgcagctgct |
13454007 |
T |
 |
| Q |
118 |
cctcttctttgtgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttggtggattag |
217 |
Q |
| |
|
||||| |||||||| ||||| || || ||||| ||| | | |||||||||| ||||||||| | | || | ||||| ||||||||||||||| | | |
|
|
| T |
13454006 |
cctctcctttgtgctgggataaccgtatatagtcctcttcgacattttggactcgacaagcctgatatgaatataggtgttgttggtcttggtggacttg |
13453907 |
T |
 |
| Q |
218 |
gtcatatggctgtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagccattgaacacttaggagc |
317 |
Q |
| |
|
| |||||||| |||||||| | ||||||||| ||||||||||| || || || || || || ||||| || | |||||||| | ||||||||| |||| |
|
|
| T |
13453906 |
gccatatggccgtgaaattcgccaaagctttcggtgctaatgtgaccgtaattagtacatcacctaaaaaggaaaaggaagcattagaacacttacgagc |
13453807 |
T |
 |
| Q |
318 |
tgactcattt |
327 |
Q |
| |
|
||||||||| |
|
|
| T |
13453806 |
ggactcattt |
13453797 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 10 - 359
Target Start/End: Original strand, 28430520 - 28430869
Alignment:
| Q |
10 |
aagaatattgatggaacaatcacatatggaggctactctgataccatggttgccgacgaacacttcttgatccgtattcctgatgccttaccacttgatg |
109 |
Q |
| |
|
|||||| ||||||| || |||||||||||||||||||| || || ||||| |||||||| ||| ||||| | ||||| || | |||| ||||||| |
|
|
| T |
28430520 |
aagaatcttgatggcaccatcacatatggaggctactccgacacaatggtcaccgacgaaagctttgtgatcagcattccaaatagcctacctcttgatg |
28430619 |
T |
 |
| Q |
110 |
ccgctgctcctcttctttgtgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtggttggtcttgg |
209 |
Q |
| |
|
| || |||||||| || || || |||||||| |||||||||||||||||||||||||||||| | || ||| || || | ||||||||||||||||| |
|
|
| T |
28430620 |
ctgcagctcctctcctctgcgccgggatcacggtgtatagccctttgaaatattttggacttgataaacctaacttgcaattaggtgtggttggtcttgg |
28430719 |
T |
 |
| Q |
210 |
tggattaggtcatatggctgtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagccattgaacac |
309 |
Q |
| |
|
|||| | |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28430720 |
tggacttggtcatatggctgtgaaatttgccaaagcttttggtgctaaggtaacagtgattagcacttctcctaacaaaaagaaggaagctattgaactt |
28430819 |
T |
 |
| Q |
310 |
ttaggagctgactcatttgtggttagccacgaacaagaccaaatgcaggt |
359 |
Q |
| |
|
| |||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
28430820 |
cttggagctgactcatttgtggttagcagtgaacaagatcaaatgcaggt |
28430869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 100 - 327
Target Start/End: Complemental strand, 47601342 - 47601115
Alignment:
| Q |
100 |
ccacttgatgccgctgctcctcttctttgtgcggggatcacagtgtatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtgg |
199 |
Q |
| |
|
|||||||| || ||||||||||||||||||| || |||||||||||||| ||| | |||||||||||| | || |||||| | ||| | ||||| | |
|
|
| T |
47601342 |
ccacttgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgataaacctggtatgcatataggtgttg |
47601243 |
T |
 |
| Q |
200 |
ttggtcttggtggattaggtcatatggctgtgaaatttggcaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagc |
299 |
Q |
| |
|
|||||||||||||| | ||||| |||||||| || |||| ||||||||||| |||||||| || || || || || || ||||||||| | || ||||| |
|
|
| T |
47601242 |
ttggtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggggctaatgtgactgtaattagtacatcacctaacaaagaaaaagaagc |
47601143 |
T |
 |
| Q |
300 |
cattgaacacttaggagctgactcattt |
327 |
Q |
| |
|
| ||| ||||||||||||||||||| |
|
|
| T |
47601142 |
aagagaatgcttaggagctgactcattt |
47601115 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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