View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7914_high_2 (Length: 317)

Name: NF7914_high_2
Description: NF7914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7914_high_2
NF7914_high_2
[»] chr6 (18 HSPs)
chr6 (17-267)||(14686309-14686560)
chr6 (20-267)||(14843438-14843686)
chr6 (17-267)||(25350810-25351062)
chr6 (30-268)||(19350545-19350784)
chr6 (49-267)||(26514344-26514564)
chr6 (30-197)||(32186284-32186452)
chr6 (30-199)||(29976377-29976547)
chr6 (145-267)||(502833-502955)
chr6 (209-268)||(2554386-2554445)
chr6 (209-268)||(17577017-17577076)
chr6 (209-267)||(13086324-13086382)
chr6 (209-267)||(13938499-13938557)
chr6 (232-267)||(18589141-18589176)
chr6 (209-268)||(24766714-24766773)
chr6 (29-90)||(23346945-23347007)
chr6 (215-267)||(11469360-11469412)
chr6 (232-268)||(21629422-21629458)
chr6 (58-122)||(34434890-34434954)
[»] chr2 (12 HSPs)
chr2 (17-267)||(11196939-11197191)
chr2 (67-197)||(33583798-33583928)
chr2 (210-268)||(15018459-15018517)
chr2 (159-268)||(6824142-6824251)
chr2 (58-103)||(45422150-45422195)
chr2 (218-267)||(43722327-43722376)
chr2 (236-267)||(26147023-26147054)
chr2 (236-267)||(43311067-43311098)
chr2 (220-266)||(8065563-8065609)
chr2 (209-267)||(12646331-12646389)
chr2 (209-267)||(22724740-22724798)
chr2 (58-114)||(42051725-42051781)
[»] chr3 (29 HSPs)
chr3 (21-267)||(40513025-40513272)
chr3 (18-267)||(34829982-34830231)
chr3 (24-267)||(31675526-31675770)
chr3 (24-267)||(31920653-31920896)
chr3 (30-268)||(19875844-19876083)
chr3 (175-267)||(53941993-53942085)
chr3 (20-267)||(55367201-55367448)
chr3 (119-200)||(14309263-14309344)
chr3 (209-268)||(2365059-2365118)
chr3 (209-268)||(19919529-19919588)
chr3 (209-267)||(52907343-52907401)
chr3 (58-103)||(30166809-30166854)
chr3 (209-268)||(34332115-34332174)
chr3 (209-267)||(962464-962522)
chr3 (209-267)||(36731674-36731732)
chr3 (164-266)||(43120976-43121078)
chr3 (209-268)||(16179721-16179780)
chr3 (236-267)||(16672322-16672353)
chr3 (209-268)||(17077597-17077656)
chr3 (209-268)||(19891458-19891517)
chr3 (67-262)||(22734029-22734224)
chr3 (209-268)||(48569323-48569382)
chr3 (236-267)||(52250426-52250457)
chr3 (213-267)||(23819350-23819404)
chr3 (209-266)||(50545024-50545081)
chr3 (218-266)||(3270989-3271037)
chr3 (220-268)||(24925985-24926033)
chr3 (211-267)||(45723069-45723125)
chr3 (58-126)||(48930356-48930424)
[»] chr4 (25 HSPs)
chr4 (17-267)||(43516049-43516300)
chr4 (142-267)||(9691137-9691262)
chr4 (24-267)||(2072135-2072379)
chr4 (209-268)||(19115217-19115276)
chr4 (209-268)||(1827840-1827899)
chr4 (33-103)||(7662773-7662844)
chr4 (209-268)||(15741001-15741060)
chr4 (209-268)||(23641891-23641950)
chr4 (209-268)||(23647549-23647608)
chr4 (164-267)||(29553102-29553205)
chr4 (29-99)||(3129458-3129529)
chr4 (209-264)||(47419585-47419640)
chr4 (209-268)||(48312875-48312934)
chr4 (209-268)||(54482460-54482519)
chr4 (209-267)||(8935855-8935913)
chr4 (145-267)||(19648412-19648534)
chr4 (218-267)||(38296495-38296544)
chr4 (220-267)||(19733289-19733336)
chr4 (209-268)||(19756048-19756107)
chr4 (209-268)||(19783699-19783758)
chr4 (220-267)||(34976733-34976780)
chr4 (29-90)||(20675622-20675684)
chr4 (209-267)||(42952832-42952890)
chr4 (29-90)||(55299212-55299274)
chr4 (209-267)||(55725008-55725066)
[»] chr1 (22 HSPs)
chr1 (21-267)||(13867141-13867381)
chr1 (17-267)||(5809169-5809420)
chr1 (20-267)||(3544402-3544650)
chr1 (49-267)||(20987775-20987994)
chr1 (21-236)||(45795867-45796083)
chr1 (32-267)||(1247887-1248123)
chr1 (143-267)||(19014284-19014408)
chr1 (142-267)||(28358603-28358730)
chr1 (119-199)||(38070522-38070602)
chr1 (17-182)||(52692059-52692225)
chr1 (209-268)||(6051384-6051443)
chr1 (209-268)||(35541815-35541874)
chr1 (145-267)||(40562859-40562981)
chr1 (17-117)||(34352949-34353040)
chr1 (29-195)||(32352683-32352850)
chr1 (209-267)||(25504293-25504351)
chr1 (236-267)||(45271049-45271080)
chr1 (209-267)||(19042904-19042962)
chr1 (209-267)||(20796441-20796499)
chr1 (29-90)||(48072909-48072971)
chr1 (232-268)||(17708862-17708898)
chr1 (239-267)||(42475199-42475227)
[»] chr8 (23 HSPs)
chr8 (21-267)||(6245674-6245923)
chr8 (24-267)||(36025116-36025360)
chr8 (49-267)||(25193708-25193927)
chr8 (24-258)||(37165431-37165666)
chr8 (128-267)||(15539757-15539896)
chr8 (24-200)||(12341162-12341339)
chr8 (123-267)||(29721212-29721356)
chr8 (209-268)||(7925167-7925226)
chr8 (209-268)||(9923382-9923441)
chr8 (209-267)||(36157935-36157993)
chr8 (32-268)||(7452955-7453192)
chr8 (209-268)||(8300584-8300643)
chr8 (209-268)||(13878787-13878846)
chr8 (209-268)||(41664668-41664727)
chr8 (67-262)||(5585328-5585523)
chr8 (209-268)||(32267335-32267394)
chr8 (236-267)||(36493189-36493220)
chr8 (209-267)||(4987366-4987424)
chr8 (209-267)||(4991997-4992055)
chr8 (209-267)||(24794501-24794559)
chr8 (209-258)||(20825080-20825129)
chr8 (211-267)||(8445596-8445652)
chr8 (239-267)||(43775072-43775100)
[»] chr7 (19 HSPs)
chr7 (30-268)||(27218422-27218661)
chr7 (128-265)||(34104177-34104314)
chr7 (48-200)||(39658755-39658908)
chr7 (30-199)||(19544771-19544941)
chr7 (163-268)||(17721370-17721475)
chr7 (209-268)||(4937428-4937487)
chr7 (209-268)||(11276548-11276607)
chr7 (30-103)||(15653172-15653244)
chr7 (33-103)||(46626426-46626497)
chr7 (209-267)||(29968755-29968813)
chr7 (209-268)||(31423375-31423434)
chr7 (209-267)||(45993357-45993415)
chr7 (211-267)||(18317138-18317194)
chr7 (211-266)||(18342297-18342352)
chr7 (29-90)||(13440653-13440715)
chr7 (209-267)||(19735299-19735357)
chr7 (209-267)||(41340330-41340388)
chr7 (67-147)||(9895537-9895617)
chr7 (220-268)||(23054270-23054318)
[»] chr5 (23 HSPs)
chr5 (17-267)||(380489-380740)
chr5 (34-200)||(42259885-42260052)
chr5 (20-104)||(476804-476889)
chr5 (209-268)||(23239164-23239223)
chr5 (209-268)||(28534976-28535035)
chr5 (209-268)||(30731614-30731673)
chr5 (209-268)||(42514501-42514560)
chr5 (209-267)||(22094550-22094608)
chr5 (209-268)||(8299482-8299541)
chr5 (209-268)||(27796265-27796324)
chr5 (263-317)||(13882139-13882193)
chr5 (209-266)||(22437999-22438056)
chr5 (212-260)||(10793231-10793279)
chr5 (209-268)||(10780982-10781041)
chr5 (236-267)||(21084689-21084720)
chr5 (209-268)||(25856739-25856798)
chr5 (209-268)||(35983091-35983150)
chr5 (236-267)||(41590897-41590928)
chr5 (209-267)||(19506779-19506837)
chr5 (29-86)||(31864834-31864892)
chr5 (209-267)||(33170439-33170497)
chr5 (209-267)||(35121989-35122047)
chr5 (58-138)||(10486349-10486430)
[»] scaffold0043 (1 HSPs)
scaffold0043 (20-247)||(33930-34158)
[»] scaffold0048 (1 HSPs)
scaffold0048 (58-267)||(63601-63809)
[»] scaffold0189 (1 HSPs)
scaffold0189 (142-267)||(6805-6930)
[»] scaffold0472 (1 HSPs)
scaffold0472 (209-268)||(4033-4092)
[»] scaffold0418 (1 HSPs)
scaffold0418 (33-103)||(8208-8279)
[»] scaffold0034 (1 HSPs)
scaffold0034 (209-268)||(105143-105202)
[»] scaffold0029 (1 HSPs)
scaffold0029 (29-99)||(134323-134394)
[»] scaffold0002 (2 HSPs)
scaffold0002 (29-99)||(312150-312221)
scaffold0002 (29-99)||(327604-327675)
[»] scaffold1809 (1 HSPs)
scaffold1809 (232-268)||(1100-1136)
[»] scaffold0131 (1 HSPs)
scaffold0131 (29-99)||(4025-4096)
[»] scaffold0016 (1 HSPs)
scaffold0016 (236-267)||(28582-28613)


Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 267
Target Start/End: Complemental strand, 14686560 - 14686309
Alignment:
Q  17 ccgcgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctc 115  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14686560 ccgcgctaccaggaccctataccaaaatccgcctctatccaccaacatccgccaacaccatttacctaacaaagcgctattaaattcccgtaacctcctc 14686461  T
Q  116 actcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaa 215  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||        |||||||    
T  14686460 actcccaaaccaccatattccttacgtaaacaaatagagtgccaagcaatccaggagattttcctgttatcctcactccctccccaaaaaaaattattaa 14686361  T
Q  216 acatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14686360 acatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 14686309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 14843686 - 14843438
Alignment:
Q  20 cgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcact 118  Q
    ||||||||| |||||||||||||| ||  ||||||| || ||||| ||||||||||||||||| |||||| | |||||||| ||||  | | | ||||||    
T  14843686 cgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaatcactattaaactccctcagctttctcact 14843587  T
Q  119 cccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaaca 218  Q
    ||||| || ||||| |||||  ||||||||| ||||  |||||| | |||||| |||||||| |||||||||||||||||||        |||||||| |    
T  14843586 cccaaccctccatactccttttgtaaacaaacagagttccaagcgacccaggaaattttccttttatcctcactccctccccaaaaaaatttattaaaaa 14843487  T
Q  219 tagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  14843486 tagattcaatgacagagattatacctgacggagctttgaagaaggaaag 14843438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 25350810 - 25351062
Alignment:
Q  17 ccgcgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctc 115  Q
    |||||| ||||  ||||||||||| || ||  |||||||||| ||||||| |||| ||||||| || || ||||| | ||||||||||  |||  |||||    
T  25350810 ccgcgccaccaacaccctataccagaacccatctctatccaccaacatcctccaaaaccattttcctaataaagcacaattaaattcctttaatttcctc 25350909  T
Q  116 actcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctcccc-nnnnnnnnttatta 214  Q
    || ||||| || ||| | ||||| ||||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||         ||||||    
T  25350910 acacccaatcctccaaactcctttcgtaaacaaactgagctccaagcaatccaggaaattttcctgttatcctcactccctccccaaattttttttatta 25351009  T
Q  215 aacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    || ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25351010 aaaatagattcaatgatagagattatacctgacggagctttgaagaaggaaag 25351062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 30 - 268
Target Start/End: Original strand, 19350545 - 19350784
Alignment:
Q  30 accctataccaaaatccgcctctatcca-caacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccac 128  Q
    |||||||||||||| || |||||||| | ||||| |||||||||||||||||| | ||||||   |||||||||| | |||  |||||| |||| ||| |    
T  19350545 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcctgcaactgcctcacccccagacctc 19350644  T
Q  129 catattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaat 228  Q
    || | |||||    ||||||| ||||| | |||| |||||||| |||||||| ||||||||||| |||||||        |||||||||| |||||||||    
T  19350645 caaactcctttttcaaacaaacagagctctaagcgatccaggaaattttcctattatcctcactacctccccaaaaaaatttattaaacaaagattcaat 19350744  T
Q  229 gatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    || ||| ||||||||||||||||| |||||||||||||||    
T  19350745 gagagaaattatacctgacggagctttgaagaaggaaagt 19350784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 267
Target Start/End: Original strand, 26514344 - 26514564
Alignment:
Q  49 ctctatccacaa-catccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattccttacgtaaaca 147  Q
    |||||||||| | ||||| ||||||||  || || || ||||| ||||||||||||| || |   ||||| ||||| || ||||| ||||| ||||||||    
T  26514344 ctctatccaccagcatcctccaacacctattccctaataaagcactattaaattcccttatctgtctcacccccaaccctccatactcctttcgtaaaca 26514443  T
Q  148 aatagagcgccaagcaatccaggagattttcctgttatcctcactccctcccc-nnnnnnnnttattaaacatagattcaatgatagagattatacctga 246  Q
     |  |||| ||||||||||||||| |||||||| |||||||||||||||||||         || ||||| ||||||||||||||||||| |||||||||    
T  26514444 tactgagctccaagcaatccaggaaattttcctattatcctcactccctccccaaaaaaattttgttaaaaatagattcaatgatagagagtatacctga 26514543  T
Q  247 cggagccttgaagaaggaaag 267  Q
    | |||| |||||||| |||||    
T  26514544 cagagctttgaagaaagaaag 26514564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 197
Target Start/End: Original strand, 32186284 - 32186452
Alignment:
Q  30 accctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccac 128  Q
    |||||||||||||| || ||||||||||| |||| | |||||||||||||| | ||||| ||   |||||| || |  |||  |||||| ||||  ||      
T  32186284 accctataccaaaacccacctctatccaccaacaactgccaacaccatttatccaacaaggctaaattaaactctctaaactgcctcacccccagccctt 32186383  T
Q  129 catattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctc 197  Q
    |||| ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  32186384 catactccttacctaaacaaatagagctccaagcaatccaggaaattttcctgttatcctcactccctc 32186452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 29976547 - 29976377
Alignment:
Q  30 accctataccaaaatccgcctctatcca-caacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccac 128  Q
    |||||||||||||| || |||||||| | ||||| |||||||| ||||||||| | ||||||   |||||||||||| |||  |||||| |||| ||| |    
T  29976547 accctataccaaaacccacctctatctatcaacaaccgccaacgccatttacccatcaaagctaaattaaattcccgcaactgcctcacccccagacctc 29976448  T
Q  129 catattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccc 199  Q
    || | |||||   |||||||| ||||| |||||| |||||||| |||||||||||||||||||| ||||||    
T  29976447 caaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccc 29976377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 502955 - 502833
Alignment:
Q  145 acaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacct 244  Q
    ||||| ||||| |||| | ||||| || |||||||| | |||||||||||| ||||        |||||||| | |||||||| | ||||||||||||||    
T  502955 acaaacagagctccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaaattattaaataaagattcaagggtagagattatacct 502856  T
Q  245 gacggagccttgaagaaggaaag 267  Q
    |||||||| |||||||| |||||    
T  502855 gacggagctttgaagaaagaaag 502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 2554386 - 2554445
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||| |||||||| ||||| |||||||||    
T  2554386 ttattaaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagt 2554445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 17577076 - 17577017
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| |||||||||   ||||||||||||||||||||| ||||| |||||||||    
T  17577076 ttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagt 17577017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 13086324 - 13086382
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||| ||||||||||||||| ||||| || |||||||||||    
T  13086324 ttatttaacaaagattcaatgaaagagattatacctgatggagctttaaagaaggaaag 13086382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 13938499 - 13938557
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||| ||||| ||||||||    
T  13938499 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaag 13938557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 267
Target Start/End: Original strand, 18589141 - 18589176
Alignment:
Q  232 agagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||| ||||||||||||||||||||    
T  18589141 agagattatacctgatggagccttgaagaaggaaag 18589176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 24766773 - 24766714
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||| ||||  ||||||||||||||||||||| ||||| |||||||||    
T  24766773 ttatttaacaaagatttaatggaagagattatacctgacggagctttgaaaaaggaaagt 24766714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 23347007 - 23346945
Alignment:
Q  29 aaccctataccaaaatccgcctctatccacaa-catccgccaacaccatttaccaaacaaagc 90  Q
    |||||||||||| || || ||||||||||| | |||||||||||||||||| || ||||||||    
T  23347007 aaccctataccacaaaccacctctatccaccagcatccgccaacaccattttcctaacaaagc 23346945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 11469360 - 11469412
Alignment:
Q  215 aacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||| ||||||||||  |||||||| |||||| ||||| ||||||||||||||    
T  11469360 aacaaagattcaatggaagagattaaacctgatggagctttgaagaaggaaag 11469412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 21629458 - 21629422
Alignment:
Q  232 agagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  21629458 agagattatacctgacggagctttgaaaaaggaaagt 21629422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 34434890 - 34434954
Alignment:
Q  58 caacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactccca 122  Q
    |||||||||||||||||||||||| ||||| ||  ||||||| ||||  ||||||| ||| ||||    
T  34434890 caacatccgccaacaccatttacctaacaatgcaatattaaactccctcaacctccgcaccccca 34434954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 9e-67; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 11196939 - 11197191
Alignment:
Q  17 ccgcgctaccagaaccctataccaaaatccgcctctatccacaa-catccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctc 115  Q
    |||||||||||||||||||||||| || |||||||||||||| | ||| |||||||||||||| || ||||||||||||||||||||| | ||||||||     
T  11196939 ccgcgctaccagaaccctataccataacccgcctctatccaccatcattcgccaacaccatttgcctaacaaagcgctattaaattcctgcaacctcctt 11197038  T
Q  116 actcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnt-tatta 214  Q
    || ||||| || ||||| ||| |||  ||||||| ||||| |||||||||| |||| ||||||||||||||||||||||||||||        | |||||    
T  11197039 acccccaaccctccatactccctacacaaacaaacagagctccaagcaatctaggaaattttcctgttatcctcactccctccccaaaaaaaatgtatta 11197138  T
Q  215 aacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11197139 aacatagattcaatgatagagattatacctgacggagccttgaagaatgaaag 11197191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 33583928 - 33583798
Alignment:
Q  67 ccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatc 166  Q
    ||||||||||||||  ||||||||  ||||||| ||||  |||  ||| || ||||| || ||||| |||||  ||||||||| ||||| ||||||||||    
T  33583928 ccaacaccatttacttaacaaagctatattaaactccctcaactgccttacccccaaccctccatactccttttgtaaacaaacagagctccaagcaatc 33583829  T
Q  167 caggagattttcctgttatcctcactccctc 197  Q
    ||||| ||||||||||||||||||| |||||    
T  33583828 caggaaattttcctgttatcctcacaccctc 33583798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 15018459 - 15018517
Alignment:
Q  210 tattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||||| | |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  15018459 tattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagt 15018517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 6824142 - 6824251
Alignment:
Q  159 aagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgacggagccttgaa 258  Q
    |||||||| |||| ||||||||||||||||||||||||||||        ||  |||| ||| | ||||||| ||| || |||| ||||||||| |||||    
T  6824142 aagcaatcgaggaaattttcctgttatcctcactccctccccaatttttttttgtaaaaataaaatcaatgagagaaataatacttgacggagctttgaa 6824241  T
Q  259 gaaggaaagt 268  Q
    ||||||||||    
T  6824242 gaaggaaagt 6824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 45422150 - 45422195
Alignment:
Q  58 caacatccgccaacaccatttaccaaacaaagcgctattaaattcc 103  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  45422150 caacatccgccaacaccatttacctaacaaagcactattaaattcc 45422195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 43722376 - 43722327
Alignment:
Q  218 atagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| ||||||  ||| ||||||||||||||||||||||||||||||||    
T  43722376 atagaatcaatggaagaaattatacctgacggagccttgaagaaggaaag 43722327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 26147023 - 26147054
Alignment:
Q  236 attatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||    
T  26147023 attatacctgacggagccttgaagaaggaaag 26147054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 43311067 - 43311098
Alignment:
Q  236 attatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||    
T  43311067 attatacctgacggagccttgaagaaggaaag 43311098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 8065609 - 8065563
Alignment:
Q  220 agattcaatgatagagattatacctgacggagccttgaagaaggaaa 266  Q
    ||||||||||  ||||||||||||||| ||||| |||||||||||||    
T  8065609 agattcaatggaagagattatacctgatggagctttgaagaaggaaa 8065563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 12646331 - 12646389
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  |||||||||||||| |||||| ||||| ||||||||    
T  12646331 ttatttaacaaagattcaatggaagagattatacctggcggagctttgaaaaaggaaag 12646389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 22724798 - 22724740
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||  ||||||||| |||||||||||||| ||| ||| || |||||||||||    
T  22724798 ttattaaacaatgattcaatggtagagattatacctaacgaagctttaaagaaggaaag 22724740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 42051781 - 42051725
Alignment:
Q  58 caacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcct 114  Q
    |||||||||||||||||||||||| ||||  ||   ||||||||||| |||||||||    
T  42051781 caacatccgccaacaccatttacctaacagggcaacattaaattcccttaacctcct 42051725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 21 - 267
Target Start/End: Complemental strand, 40513272 - 40513025
Alignment:
Q  21 gctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactc 119  Q
    |||||||| ||||||||||| || || ||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||| | ||| ||||||| |    
T  40513272 gctaccaggaccctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaaatcctgcaacttcctcaccc 40513173  T
Q  120 ccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacat 219  Q
    ||||||| ||||| ||||||||||| |||| ||||| |||||| | |||||| ||||||||||| ||||||||||||||||        |||||||| |     
T  40513172 ccaaacccccatactccttacgtaagcaaacagagctccaagctacccaggaaattttcctgttttcctcactccctccccaaaaaaatttattaaaaag 40513073  T
Q  220 agattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40513072 agattcaatgatagagattatacctgacggagccttgaagaaggaaag 40513025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 34829982 - 34830231
Alignment:
Q  18 cgcgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctca 116  Q
    |||||| |||| ||||||||||| || ||  || ||||||| ||||||||||||||||||||||| |||||||| |||||||||||  | ||| ||||||    
T  34829982 cgcgctgccagtaccctataccataacccaactatatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcatgcaacttcctca 34830081  T
Q  117 ctcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaa 216  Q
    | ||||| || ||||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||| |||        ||||||||    
T  34830082 cccccaaccctccatactccttacgtaaacaaacagagctccaagcaatccaggaaattttcctgttatcctcactccct-cccaaaaaaaattattaaa 34830180  T
Q  217 catagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
     ||||||||||||  ||||||||||||||||||||||  ||||||||||||    
T  34830181 aatagattcaatggcagagattatacctgacggagccaggaagaaggaaag 34830231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 267
Target Start/End: Original strand, 31675526 - 31675770
Alignment:
Q  24 accagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactccca 122  Q
    ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||||| ||||||||    ||||| ||||  |||   ||||| || |    
T  31675526 accagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagcatggttaaactccctcaactgtctcaccccta 31675625  T
Q  123 aaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacataga 222  Q
    | || ||||| ||||| |||||||||| ||||   ||||| | ||||||||||||||||||||||||||||||||||          ||||||| |||||    
T  31675626 accctccatactcctttcgtaaacaaacagagtttcaagcgacccaggagattttcctgttatcctcactccctcccaaaaaaaaaatattaaaaataga 31675725  T
Q  223 ttcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  31675726 ttcaatgacagagattatacctgacggagctttgaagaaggaaag 31675770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 267
Target Start/End: Complemental strand, 31920896 - 31920653
Alignment:
Q  24 accagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactccca 122  Q
    ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||||| ||||||||    ||||| ||||  |||   |||||||| |    
T  31920896 accagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagcatggttaaactccctcaactgtctcactccta 31920797  T
Q  123 aaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacataga 222  Q
    | || ||||| ||||| |||||||||| ||||   ||||| | ||||||||||||||||||||||||||||||| |||        |||||||| |||||    
T  31920796 accctccatactcctttcgtaaacaaacagagtttcaagcgacccaggagattttcctgttatcctcactccct-cccaaatttttttattaaaaataga 31920698  T
Q  223 ttcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||| ||||||||||| ||||| ||| ||||||||||||||    
T  31920697 ttcaatgacagagattatacttgacgaagctttgaagaaggaaag 31920653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 268
Target Start/End: Original strand, 19875844 - 19876083
Alignment:
Q  30 accctataccaaaatccgcctctatcca-caacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccac 128  Q
    |||||||||||||| || |||||||| | ||||| |||||||||||||||||  | ||||||   |||||||||||| |||  |||||| |||| ||| |    
T  19875844 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttactcatcaaagctaaattaaattcccgcaacagcctcacccccagacctc 19875943  T
Q  129 catattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaat 228  Q
    || | |||||   |||||||| ||||| |||||| |||||||| |||||||||||||||||||| |||| ||        |||||||||| |||||||||    
T  19875944 caaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctcgccaaaaaaatttattaaacaaagattcaat 19876043  T
Q  229 gatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    || ||| ||||||||||||||||  |||||||||||||||    
T  19876044 gagagaaattatacctgacggagatttgaagaaggaaagt 19876083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 53941993 - 53942085
Alignment:
Q  175 tttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||| |||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  53941993 tttcatgttatcctcactccctccccaaaattttttattaaaaatagattcaatgatagagattatacctgacggagctttgaagaaggaaag 53942085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 55367201 - 55367448
Alignment:
Q  20 cgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcact 118  Q
    ||||| || |||| ||||||| || || |||||||| || ||||||| |||||||||||| || ||||| ||   ||||||||||   ||| |||||||     
T  55367201 cgctaacaaaaccttataccacaacccacctctatcaactaacatcctccaacaccattttcctaacaacgcaagattaaattccttcaacttcctcacc 55367300  T
Q  119 cccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaaca 218  Q
    ||||| || ||||| ||||| ||| |||||||| |   |||||| |||||||| ||||||||||| ||||||||||||||||         | |||||||    
T  55367301 cccaaccc-ccatactcctttcgtgaacaaatataattccaagcgatccaggaaattttcctgttgtcctcactccctccccaaaaaaacattttaaaca 55367399  T
Q  219 tagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
     |||||| |||  ||||||||||||||||| ||| ||||| ||||||||    
T  55367400 aagattctatggaagagattatacctgacgcagctttgaaaaaggaaag 55367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 14309263 - 14309344
Alignment:
Q  119 cccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctcccc 200  Q
    ||||| || ||||| |||||  ||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  14309263 cccaaccctccatactccttttgtaaacaaatagagctccaagcaatctaggaaattttcctgttatcctcactccctcccc 14309344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 2365059 - 2365118
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  2365059 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 2365118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 19919588 - 19919529
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  19919588 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 19919529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 52907401 - 52907343
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||   ||||||||||||||| ||||| ||||||||||||||    
T  52907401 ttattaaacatagattcaatagaagagattatacctgatggagctttgaagaaggaaag 52907343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 30166854 - 30166809
Alignment:
Q  58 caacatccgccaacaccatttaccaaacaaagcgctattaaattcc 103  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  30166854 caacatccgccaacaccatttacctaacaaagcactattaaattcc 30166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 34332174 - 34332115
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| || || |||||||||    
T  34332174 ttattaaacaaagattcaatggaagagattatacctgacggagctttaaaaaaggaaagt 34332115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 962522 - 962464
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||| ||||| ||||||||    
T  962522 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaag 962464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 36731674 - 36731732
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||| ||||| ||||||||    
T  36731674 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaag 36731732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 43121078 - 43120976
Alignment:
Q  164 atccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgacggagccttgaagaagg 263  Q
    ||||| || |||||||| | |||||||||||| ||||        |||||||||| ||||||||||  ||||||||||||| | ||||| ||||||||||    
T  43121078 atccaagatattttcctatgatcctcactcccaccccaaaaaaatttattaaacaaagattcaatggaagagattatacctaatggagctttgaagaagg 43120979  T
Q  264 aaa 266  Q
    |||    
T  43120978 aaa 43120976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 16179721 - 16179780
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||||||||  |||||||||||||||| |||| ||||| |||||||||    
T  16179721 ttatttaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagt 16179780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Complemental strand, 16672353 - 16672322
Alignment:
Q  236 attatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||    
T  16672353 attatacctgacggagccttgaagaaggaaag 16672322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 17077656 - 17077597
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||||||||  |||||||||||||||| |||| ||||| |||||||||    
T  17077656 ttattcaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagt 17077597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 19891458 - 19891517
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||||||||  ||| ||||||||||||||||| ||||| |||||||||    
T  19891458 ttatttaacaaagattcaatggaagatattatacctgacggagctttgaaaaaggaaagt 19891517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 262
Target Start/End: Complemental strand, 22734224 - 22734029
Alignment:
Q  67 ccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatc 166  Q
    ||||||||||||||| |  |||||  |||||||||||| |||| |||||||  |||| || ||||| |||||||| ||||||| |     ||||   | |    
T  22734224 ccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaatcctccatactccttacgcaaacaaacaatattccaacgtaac 22734125  T
Q  167 caggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgacggagccttgaagaag 262  Q
    || || |||||||| | |||||||||||| |||         ||||| || ||||||||||||  ||||||||||| ||| |||||||||||||||    
T  22734124 caagatattttcctatgatcctcactcccccccaaaaaaaaattattcaatatagattcaatggaagagattatacatgatggagccttgaagaag 22734029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 48569382 - 48569323
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||||||||  ||||||||||||||| ||||| ||||| |||||||||    
T  48569382 ttatttaacaaagattcaatggaagagattatacctgatggagctttgaaaaaggaaagt 48569323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Complemental strand, 52250457 - 52250426
Alignment:
Q  236 attatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||    
T  52250457 attatacctgacggagccttgaagaaggaaag 52250426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 23819350 - 23819404
Alignment:
Q  213 taaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||| ||||||||||  ||||||||||| ||| ||||| ||||||||||||||    
T  23819350 taaacaaagattcaatggaagagattatacttgatggagctttgaagaaggaaag 23819404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 50545024 - 50545081
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaa 266  Q
    |||||||| | ||||||||||  ||||||||||||||| ||| | |||||||||||||    
T  50545024 ttattaaataaagattcaatggaagagattatacctgatggacctttgaagaaggaaa 50545081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 3271037 - 3270989
Alignment:
Q  218 atagattcaatgatagagattatacctgacggagccttgaagaaggaaa 266  Q
    |||||||||| | |||| ||| ||||||| |||||||||||||||||||    
T  3271037 atagattcaaaggtagaaattctacctgagggagccttgaagaaggaaa 3270989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 24926033 - 24925985
Alignment:
Q  220 agattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||||||||  ||||||||||||||| ||||| |||||||| ||||||    
T  24926033 agattcaatggaagagattatacctgatggagctttgaagaaagaaagt 24925985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 45723125 - 45723069
Alignment:
Q  211 attaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||| ||||||||||   ||||||||||||| || || |||||||||||||||||    
T  45723125 attaaaaatagattcaagagtagagattatacccgaaggggccttgaagaaggaaag 45723069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 48930356 - 48930424
Alignment:
Q  58 caacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaacc 126  Q
    ||||| |||||||||||||||||| ||||| ||  ||||||| ||||  ||||||| ||| ||||||||    
T  48930356 caacagccgccaacaccatttacctaacaatgcaatattaaactccctcaacctccgcacccccaaacc 48930424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 267
Target Start/End: Complemental strand, 43516300 - 43516049
Alignment:
Q  17 ccgcgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctc 115  Q
    |||| |||| || ||||||||||| || || ||||||||| | |||||| |||||||||||||||| |||||||| |||||||||||| | ||| |||||    
T  43516300 ccgcactactaggaccctataccataaaccacctctatccgccaacatctgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctc 43516201  T
Q  116 actcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnt-tatta 214  Q
    || ||||| || ||||| ||||||||||| |||| ||||| |||||||| |||||| ||||||||||||||| ||||||||||||        | |||||    
T  43516200 acccccaaccctccatactccttacgtaagcaaacagagctccaagcaacccaggaaattttcctgttatcc-cactccctccccaatttttttatatta 43516102  T
Q  215 aacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    || ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  43516101 aaaatagattcaatgacagagattatacctgatggagccttgaagaaggaaag 43516049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 9691137 - 9691262
Alignment:
Q  142 taaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattata 241  Q
    |||||||||||||| ||||||||| ||||  ||||| |||||||||||||| || ||||        ||  |||| |||||||||| |||||||||||||    
T  9691137 taaacaaatagagctccaagcaattcagggaatttttctgttatcctcactaccaccccaaattttttttgtaaaaatagattcaaagatagagattata 9691236  T
Q  242 cctgacggagccttgaagaaggaaag 267  Q
    |||||| || | ||||||||||||||    
T  9691237 cctgacagaactttgaagaaggaaag 9691262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 267
Target Start/End: Original strand, 2072135 - 2072379
Alignment:
Q  24 accagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactccca 122  Q
    ||||| ||||||||||| |  || ||||||||||| |||||| |||| ||||||||||| || |||||  |||||||| |||  |||   ||||  ||||    
T  2072135 accagcaccctataccacatccctcctctatccaccaacatctgccatcaccatttacctaataaagcaatattaaatcccctcaactgtctcaacccca 2072234  T
Q  123 aaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacataga 222  Q
    || | ||||| || | |||||||  |||||||| |||||| |||||| | |||||| |||| ||||| ||||||||||        ||   ||| |||||    
T  2072235 aatctccatactcttgacgtaaagtaatagagctccaagcgatccagtaaattttcatgttgtcctcgctccctccccaattttttttgaaaaaaataga 2072334  T
Q  223 ttcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
     ||||||| |||||||||| |||||||||| |||||||| |||||    
T  2072335 gtcaatgaaagagattatatctgacggagctttgaagaaagaaag 2072379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 19115217 - 19115276
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||| | |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  19115217 ttattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagt 19115276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 1827899 - 1827840
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  1827899 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 1827840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 7662844 - 7662773
Alignment:
Q  33 ctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcc 103  Q
    |||||||| || || ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  7662844 ctataccacaaaccacctctgtccaccaacatccgccaacaccatttacctaacaaagcactattaaattcc 7662773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 15741001 - 15741060
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  15741001 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 15741060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 23641950 - 23641891
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  23641950 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 23641891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 23647608 - 23647549
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  23647608 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 23647549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 29553205 - 29553102
Alignment:
Q  164 atccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgacggagccttgaagaagg 263  Q
    ||||| |||||||||||||  ||||||| ||| ||||        |||||||| | ||||||||||  ||||||||||||||||||||| ||||||||||    
T  29553205 atccaagagattttcctgtgttcctcacccccaccccaaaaaaatttattaaataaagattcaatggaagagattatacctgacggagctttgaagaagg 29553106  T
Q  264 aaag 267  Q
    ||||    
T  29553105 aaag 29553102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 3129529 - 3129458
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaa 99  Q
    |||||||||||| || || ||||||||||| |||||||||||||||||||| || ||||||||  |||||||    
T  3129529 aaccctataccacaaaccacctctatccaccaacatccgccaacaccatttccctaacaaagcattattaaa 3129458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 47419585 - 47419640
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaagga 264  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||    
T  47419585 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaagga 47419640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 48312875 - 48312934
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  48312875 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 48312934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 54482519 - 54482460
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  54482519 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 54482460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 8935855 - 8935913
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||| | | ||||||||  ||||||||||||||||||||| ||||||||||||||    
T  8935855 ttattaaataaaaattcaatggcagagattatacctgacggagctttgaagaaggaaag 8935913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 267
Target Start/End: Original strand, 19648412 - 19648534
Alignment:
Q  145 acaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacct 244  Q
    ||||||||||  |||| | ||||| || |||||||| | |||||||||||| ||||        |||||||| | |||||||| | |||| |||||||||    
T  19648412 acaaatagagttccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaaattattaaataaagattcaagggtagaaattatacct 19648511  T
Q  245 gacggagccttgaagaaggaaag 267  Q
    |||||||| |||||||| |||||    
T  19648512 gacggagctttgaagaaagaaag 19648534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 38296495 - 38296544
Alignment:
Q  218 atagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||  | | ||||||||||||||||||||||||||||||||    
T  38296495 atagattcaatggaaaaaattatacctgacggagccttgaagaaggaaag 38296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 19733336 - 19733289
Alignment:
Q  220 agattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||  ||||||||||||||||||||| ||||| ||||||||    
T  19733336 agattcaatggaagagattatacctgacggagctttgaaaaaggaaag 19733289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 19756048 - 19756107
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||||| |||  ||||| |||||||||    
T  19756048 ttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagt 19756107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 19783758 - 19783699
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||||| |||  ||||| |||||||||    
T  19783758 ttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagt 19783699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 34976733 - 34976780
Alignment:
Q  220 agattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||  ||||||||||||||| ||||| ||||||||||||||    
T  34976733 agattcaatggaagagattatacctgatggagctttgaagaaggaaag 34976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 20675622 - 20675684
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagc 90  Q
    |||||||||||| || || ||||| ||||| |||||||||||||||||||| || ||||||||    
T  20675622 aaccctataccacaaaccacctctgtccaccaacatccgccaacaccattttcctaacaaagc 20675684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 42952890 - 42952832
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  ||||||||||||||| ||||| || |||||||||||    
T  42952890 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaag 42952832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 55299212 - 55299274
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagc 90  Q
    ||||| |||||| || || ||||||||||| |||||||||||||||||||| || ||||||||    
T  55299212 aacccgataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagc 55299274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 55725066 - 55725008
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  |||||||||||| |||||||| ||||| ||||||||    
T  55725066 ttatttaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaag 55725008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 21 - 267
Target Start/End: Complemental strand, 13867381 - 13867141
Alignment:
Q  21 gctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactc 119  Q
    |||||||| ||||||||||| || || ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||| |    
T  13867381 gctaccaggaccctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcaccc 13867282  T
Q  120 ccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacat 219  Q
    |||||||       ||| ||||||| ||||  |||| | |||||| |||||| |||||||||||||||||||||||||||          ||||||| ||    
T  13867281 ccaaacc-------tccatacgtaagcaaaccgagctctaagcaacccaggaaattttcctgttatcctcactccctcccaaaaaaaaaatattaaaaat 13867189  T
Q  220 agattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13867188 agattcaatgacagagattatacctgacggagccttgaagaaggaaag 13867141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 5809169 - 5809420
Alignment:
Q  17 ccgcgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctc 115  Q
    ||||||||| |||||||||||||| |  || ||| | ||||| |||||||||||||||||| |||| ||||||||||||||||||||| | ||| |||||    
T  5809169 ccgcgctacaagaaccctataccagagcccacctttgtccaccaacatccgccaacaccatgtacctaacaaagcgctattaaattcctgcaacttcctc 5809268  T
Q  116 actcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaa 215  Q
    || ||||| |  | ||| |||||||||||||||| | ||| ||||| || |||||| |||||||| ||||||||| |||||||||        |||||||    
T  5809269 acccccaaccgtctatactccttacgtaaacaaacaaagctccaagaaaaccaggaaattttcctattatcctcattccctccccaattttttttattaa 5809368  T
Q  216 acatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    | ||||||| ||||| | ||||||||||||||||||| ||||||||||||||    
T  5809369 aaatagatttaatgacaaagattatacctgacggagctttgaagaaggaaag 5809420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 3544650 - 3544402
Alignment:
Q  20 cgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcact 118  Q
    ||||||||| |||||||||||||| ||  ||||||| || ||||| ||||||||||||||||| |||||| | | |||||| ||||  | |   ||||||    
T  3544650 cgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaaacacaattaaactccctcagctatctcact 3544551  T
Q  119 cccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaaca 218  Q
    ||||| || ||||| |||||  ||||||||| ||||  |||||| | |||||| ||||||||||||||||||||||||||||        |||||||| |    
T  3544550 cccaaccctccatactccttttgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaa 3544451  T
Q  219 tagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  3544450 tagattcaatgacagagattatacctgacggagctttgaagaaggaaag 3544402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 49 - 267
Target Start/End: Original strand, 20987775 - 20987994
Alignment:
Q  49 ctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattccttacgtaaaca 147  Q
    |||||||||| ||||||| ||| |||||||| || ||||| ||  ||||||||||||  |||  ||| || ||||  |||||| | ||||||||||||||    
T  20987775 ctctatccaccaacatcctccagcaccatttccctaacaacgcagtattaaattccctcaactgcctaacccccagcccaccaaactccttacgtaaaca 20987874  T
Q  148 aatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgac 247  Q
     ||||||| |||||||| |||||| ||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||| |||| ||||    
T  20987875 gatagagctccaagcaacccaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaatagattcaatgatagagatgatacatgac 20987974  T
Q  248 ggagccttgaagaaggaaag 267  Q
    ||||| ||||||||||||||    
T  20987975 ggagctttgaagaaggaaag 20987994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 45795867 - 45796083
Alignment:
Q  21 gctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactc 119  Q
    |||||||| ||| ||||||| || || ||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||| |    
T  45795867 gctaccaggaccttataccataaaccacctttatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcaccc 45795966  T
Q  120 ccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacat 219  Q
    |||| || ||||| |||||||||||||||| ||||| |||||||| |||  | | |||||||||||||||||||||||||         |||||||| ||    
T  45795967 ccaaccctccatactccttacgtaaacaaacagagctccaagcaacccaaaaaaatttcctgttatcctcactccctccctaaaaaaatttattaaaaat 45796066  T
Q  220 agattcaatgatagaga 236  Q
    ||||||||||| |||||    
T  45796067 agattcaatgacagaga 45796083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 267
Target Start/End: Complemental strand, 1248123 - 1247887
Alignment:
Q  32 cctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccacca 130  Q
    |||||||||||| || ||| ||||||| || || | ||||||| ||||||| |||||||| |||||||| |||| ||||  |||||| || || || |||    
T  1248123 cctataccaaaaaccacctttatccaccaatatacaccaacactatttacctaacaaagcactattaaactcccttaactgcctcacccctaacccccca 1248024  T
Q  131 tattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatga 230  Q
    || |||||  ||||||||| ||||| |||||| ||||| || |||||| |||||||||||| ||||||||        |||||||| |||||||||||||    
T  1248023 tactccttttgtaaacaaacagagctccaagcgatccatgaaattttcttgttatcctcacgccctccccaaatttttttattaaaaatagattcaatga 1247924  T
Q  231 tagagattatacctgacggagccttgaagaaggaaag 267  Q
     |||||||||||| |||| ||| ||||| ||||||||    
T  1247923 cagagattatacccgacgaagctttgaaaaaggaaag 1247887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 19014408 - 19014284
Alignment:
Q  143 aaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatac 242  Q
    ||||||||||||| ||||||||||||| | |||||| |||||||||||||||||||||        |  ||||| ||||||||||||  ||||||||||     
T  19014408 aaacaaatagagctccaagcaatccagtaaattttcatgttatcctcactccctccccaaaaaaattgtttaaaaatagattcaatggaagagattatat 19014309  T
Q  243 ctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||||||    
T  19014308 ctgacagagctttgaagaaggaaag 19014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 28358603 - 28358730
Alignment:
Q  142 taaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttatta--aacatagattcaatgatagagatta 239  Q
    |||||| | ||||| ||||||||||||| | ||||| ||||||||||||||||||||||        || ||   || ||||||||||||| ||||||||    
T  28358603 taaacacacagagctccaagcaatccagaaaatttttctgttatcctcactccctccccaatattttttttttttaaaatagattcaatgagagagatta 28358702  T
Q  240 tacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||| ||||||||||||||    
T  28358703 tacctgacggagctttgaagaaggaaag 28358730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 38070522 - 38070602
Alignment:
Q  119 cccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccc 199  Q
    |||||||| |||| ||||||||||||||||| || || |||||| ||||| || |||||||||||||||||||||||||||    
T  38070522 cccaaacccccatcttccttacgtaaacaaacagtgctccaagcgatccatgaaattttcctgttatcctcactccctccc 38070602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 52692059 - 52692225
Alignment:
Q  17 ccgcgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctc 115  Q
    |||||| ||||  ||||||||||| || ||  |||||||||| ||||||| |||||||||||| || || ||||| | ||||||||||| |||   ||||    
T  52692059 ccgcgccaccaacaccctataccagaacccctctctatccaccaacatcctccaacaccattttcctaataaagcacaattaaattcccttaattgcctc 52692158  T
Q  116 actcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgt 182  Q
    ||||| || || ||| | ||||| |||| |||||  |||| ||||||||| ||||| ||||||||||    
T  52692159 actcctaatcctccaaactcctttcgtagacaaaccgagctccaagcaattcaggaaattttcctgt 52692225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 6051384 - 6051443
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  6051384 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 6051443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 35541815 - 35541874
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  35541815 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 35541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 40562981 - 40562859
Alignment:
Q  145 acaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacct 244  Q
    ||||||||||| ||||||||| ||||| |||||||||||| |||||| |||| |||        || ||||| ||||||||||||| ||| || ||||||    
T  40562981 acaaatagagctccaagcaattcaggaaattttcctgttaacctcacaccctgcccaaaaaattttgttaaaaatagattcaatgagagaaatgatacct 40562882  T
Q  245 gacggagccttgaagaaggaaag 267  Q
    ||| |||| ||||| || |||||    
T  40562881 gacagagctttgaaaaaagaaag 40562859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 34352949 - 34353040
Alignment:
Q  17 ccgcgctaccagaaccctataccaaaatccgcctctatccacaacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctca 116  Q
    ||||||||||| |||||||||||| || ||||||||||||||         |||||||||||||| |||||||| |||||||||||| | ||| ||||||    
T  34352949 ccgcgctaccaaaaccctataccataacccgcctctatccac---------caacaccatttacctaacaaagcactattaaattcctgcaacttcctca 34353039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 32352850 - 32352683
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaacca 127  Q
    |||||||||||| || || ||||||||||| |||||||||||||||||||| || ||||||||   |||||| |||   ||  ||||||| ||||||||     
T  32352850 aaccctataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttcctcacccccaaaccg 32352751  T
Q  128 ccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccc 195  Q
    ||||| |||||   |||||||| ||   |||||   | ||| || |||||||| ||||||||||||||    
T  32352750 ccatactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctattatcctcactccc 32352683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 25504351 - 25504293
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||| | |||||||| | |||||||||||||||||||||| |||||||| |||||    
T  25504351 ttattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaag 25504293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 45271049 - 45271080
Alignment:
Q  236 attatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||    
T  45271049 attatacctgacggagccttgaagaaggaaag 45271080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 19042904 - 19042962
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||||| ||||||||| | ||||||||||||||| |||||   ||||||||||||    
T  19042904 ttattaaacaaagattcaataaaagagattatacctgatggagctcagaagaaggaaag 19042962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 20796441 - 20796499
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  ||||||||||||||| ||||| || |||||||||||    
T  20796441 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaag 20796499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 48072971 - 48072909
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagc 90  Q
    ||||| |||||| || || ||||||||||| |||||||||||||||||||| || ||||||||    
T  48072971 aacccgataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagc 48072909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 17708862 - 17708898
Alignment:
Q  232 agagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  17708862 agagattatacctgatggagctttgaagaaggaaagt 17708898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 267
Target Start/End: Complemental strand, 42475227 - 42475199
Alignment:
Q  239 atacctgacggagccttgaagaaggaaag 267  Q
    |||||||||||||||||||||||||||||    
T  42475227 atacctgacggagccttgaagaaggaaag 42475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 6245674 - 6245923
Alignment:
Q  21 gctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactc 119  Q
    ||||| |||||||||||||| |  || ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||| | ||| ||||||| |    
T  6245674 gctacaagaaccctataccagagcccacctctatccaccaacatccgccaacacaatttacctaacaaagcgctattaaactcctgcaacttcctcaccc 6245773  T
Q  120 ccaaaccaccata--ttccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaac 217  Q
    |||| || |||||   ||||||| |||||||| | ||| ||||| ||||||||| |||||||| ||||| |||||||||||||        ||||||||     
T  6245774 ccaaccctccatacgctccttacataaacaaacaaagctccaagaaatccaggaaattttcctattatcatcactccctccccaaatttttttattaaat 6245873  T
Q  218 atagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||| ||||||||| || |||||||||||||||||| ||||||||||||||    
T  6245874 ataaattcaatgacagggattatacctgacggagctttgaagaaggaaag 6245923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 267
Target Start/End: Original strand, 36025116 - 36025360
Alignment:
Q  24 accagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactccca 122  Q
    |||| ||| |||||||| || || ||||||||||| |||||||||||||||||||  || || |||||  |||||||||| |  |||  |||||| ||||    
T  36025116 accaaaactctataccataaccctcctctatccaccaacatccgccaacaccattatcctaataaagcaatattaaattcactcaactgcctcaccccca 36025215  T
Q  123 aaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacataga 222  Q
    | || || | ||| ||||||||||||| || || |||||| |||||||| ||||||||||||||||||||||||||||        |||||||| |||||    
T  36025216 atcccccctcttctttacgtaaacaaacagtgctccaagcgatccaggaaattttcctgttatcctcactccctccccaaatttttttattaaaaataga 36025315  T
Q  223 ttcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
     | ||||  ||||||||||||||||||||| ||||||||||||||    
T  36025316 gttaatggaagagattatacctgacggagctttgaagaaggaaag 36025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 267
Target Start/End: Original strand, 25193708 - 25193927
Alignment:
Q  49 ctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattccttacgtaaaca 147  Q
    |||||||||| ||||||| ||| |||||||| || || ||||| | ||||||||||| ||||  |||||| ||||| || ||| | |||||  |||||||    
T  25193708 ctctatccaccaacatcctccagcaccattttcctaataaagcacaattaaattcccttaactgcctcacacccaatcctccaaactccttttgtaaaca 25193807  T
Q  148 aatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgac 247  Q
    ||  || | ||||| ||||||||| |||||||||||||||||| |||||||||        |||| ||| ||||||||||||||||||||||||||||||    
T  25193808 aactgatctccaagaaatccaggaaattttcctgttatcctcattccctccccaaattttgttataaaaaatagattcaatgatagagattatacctgac 25193907  T
Q  248 ggagccttgaagaaggaaag 267  Q
     |||| ||||||||||||||    
T  25193908 agagctttgaagaaggaaag 25193927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 24 - 258
Target Start/End: Complemental strand, 37165666 - 37165431
Alignment:
Q  24 accagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactccca 122  Q
    ||||| ||||||||||| || || ||||||||||| ||||||| |||||| || || || || | |||  |||||||||||   |||| |||||| ||||    
T  37165666 accagtaccctataccacaagcctcctctatccactaacatcctccaacatcactttcctaatagagcaatattaaattccttcaaccgcctcaccccca 37165567  T
Q  123 aaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacataga 222  Q
    |||| ||||  ||||| ||||| ||||  |||| |||||| ||||||||||||||||||||||||||||||||||||         | |||||| |||||    
T  37165566 aacccccattctcctttcgtaagcaaaccgagctccaagctatccaggagattttcctgttatcctcactccctcccaaaaaaaaataattaaaaataga 37165467  T
Q  223 ttcaatgatagagattatacctgacggagccttgaa 258  Q
    |||||||  ||||||||||||||||||||| |||||    
T  37165466 ttcaatggaagagattatacctgacggagctttgaa 37165431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 267
Target Start/End: Original strand, 15539757 - 15539896
Alignment:
Q  128 ccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaa 227  Q
    ||||| ||||||| |||||| ||||||| |||||||| |||||| |||||| |||| ||||||||||||||||        |||||||| ||||||||||    
T  15539757 ccatactccttacataaacagatagagctccaagcaacccaggaaattttcatgttctcctcactccctccccaaaattttttattaaaaatagattcaa 15539856  T
Q  228 tgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||||| || |||||||||||||| ||||||||||||||    
T  15539857 tgatagaaatgatacctgacggagctttgaagaaggaaag 15539896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 12341162 - 12341339
Alignment:
Q  24 accagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactccca 122  Q
    ||||| |||||| |||| || || ||||||||||| ||||||| ||||||||| || || ||||||||  |||||||||||   |||   ||||| ||||    
T  12341162 accagtaccctaaaccacaaccctcctctatccactaacatcctccaacaccactttcctaacaaagccatattaaattccttcaactgtctcaccccca 12341261  T
Q  123 aaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctcccc 200  Q
    |||| ||||  ||||| |||||||| |  || | ||||||||||||||| ||||||||||||||||||||||||||||    
T  12341262 aacccccattctcctttcgtaaacataccgaactccaagcaatccaggaaattttcctgttatcctcactccctcccc 12341339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 267
Target Start/End: Complemental strand, 29721356 - 29721212
Alignment:
Q  123 aaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacataga 222  Q
    |||| ||||| ||||||||  |||||||| |   |||||| |||||||| ||||||||||||||||||||||||||||           |||||||||||    
T  29721356 aacccccatactccttacgagaacaaatataattccaagcgatccaggaaattttcctgttatcctcactccctccccaaaaaaacaatttaaacataga 29721257  T
Q  223 ttcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||  ||||||||||||||||||||| ||||| ||||||||    
T  29721256 ttcaatggaagagattatacctgacggagctttgaaaaaggaaag 29721212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 7925167 - 7925226
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  7925167 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 7925226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 9923382 - 9923441
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  9923382 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 9923441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 36157935 - 36157993
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||||| ||||||||||  ||||||||||||||| ||||| ||||||||||||||    
T  36157935 ttattaaacaaagattcaatggaagagattatacctgatggagctttgaagaaggaaag 36157993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 268
Target Start/End: Original strand, 7452955 - 7453192
Alignment:
Q  32 cctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccacca 130  Q
    ||||||||| || || ||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||||    |||   ||||| |||||||| |||    
T  7452955 cctataccacaaaccacctctgtccaccaacatccgccaacaccacttacctaacaaagcactattaaattcattcaactgtctcacccccaaacctcca 7453054  T
Q  131 tattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatga 230  Q
    || |||||   | |||||| ||    |||| | |||||||| ||||| || | ||||||||| || ||||        |||||||| | |||||||| |     
T  7453055 tactccttttttgaacaaacagttttccaacctatccaggaaatttttctatgatcctcactgcccccccaaaaaaaattattaaataaagattcaaggg 7453154  T
Q  231 tagagattatacctgacggagccttgaagaaggaaagt 268  Q
     ||||||||||||||| ||||| |||||||| ||||||    
T  7453155 aagagattatacctgatggagctttgaagaaagaaagt 7453192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 8300584 - 8300643
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| ||||| |||||||||    
T  8300584 ttattaaacaaagattcaatggaagagattatacctgccggagctttgaaaaaggaaagt 8300643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 13878846 - 13878787
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  13878846 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 13878787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 41664727 - 41664668
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  | ||||||||||||||||||| ||||| |||||||||    
T  41664727 ttattaaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagt 41664668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 262
Target Start/End: Original strand, 5585328 - 5585523
Alignment:
Q  67 ccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatc 166  Q
    ||||||||||||||| |  |||||  |||||||||||| |||| |||||||  |||| || ||||| |||||||| ||||||| |     ||||   | |    
T  5585328 ccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaatcctccatactccttacgcaaacaaacaatattccaacgtaac 5585427  T
Q  167 caggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgacggagccttgaagaag 262  Q
    || || |||||||| | |||||||||||| |||         ||||| || ||||||||||||  ||||||||||| ||| |||||||||||||||    
T  5585428 caagatattttcctatgatcctcactcccccccaaaaaaaaattattcaatatagattcaatggaagagattatacatgatggagccttgaagaag 5585523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 32267335 - 32267394
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||  ||| ||||| |||||||||    
T  32267335 ttattaaacaaagattcaatggaagagattatacctgacaaagctttgaaaaaggaaagt 32267394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 36493189 - 36493220
Alignment:
Q  236 attatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||    
T  36493189 attatacctgacggagccttgaagaaggaaag 36493220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 4987424 - 4987366
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||| | |||||||| | |||| ||||||||||||||||| |||||||| |||||    
T  4987424 ttattaaataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaag 4987366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 4992055 - 4991997
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||| ||||||||| ||  |||||||||| ||||| |||| ||||||||||||||    
T  4992055 ttattaaaaatagattcagtggaagagattatatctgacagagctttgaagaaggaaag 4991997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 24794501 - 24794559
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  ||||||||||||||| ||||| || |||||||||||    
T  24794501 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaag 24794559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 20825080 - 20825129
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaa 258  Q
    |||||||||| |||||||||   ||||||||||||||||||||| |||||    
T  20825080 ttattaaacaaagattcaatagaagagattatacctgacggagctttgaa 20825129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 8445596 - 8445652
Alignment:
Q  211 attaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||| ||||||||||||  ||| || |||||||| ||||| ||||||||||||||    
T  8445596 attaaatatagattcaatggaagaaatgatacctgaaggagctttgaagaaggaaag 8445652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 267
Target Start/End: Complemental strand, 43775100 - 43775072
Alignment:
Q  239 atacctgacggagccttgaagaaggaaag 267  Q
    |||||||||||||||||||||||||||||    
T  43775100 atacctgacggagccttgaagaaggaaag 43775072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 27218661 - 27218422
Alignment:
Q  30 accctataccaaaatccgcctctatcca-caacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccac 128  Q
    ||||||||||||||||| |||||||| | ||||| |||||||||||||||||| ||||||||   |||||||| ||| |||  |||||| ||||  || |    
T  27218661 accctataccaaaatccacctctatctatcaacaaccgccaacaccatttacctaacaaagctaaattaaatttccgcaactgcctcacccccagccctc 27218562  T
Q  129 catattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaat 228  Q
    || | |||||   |||||||| ||||| | |||| |||||||| |||||||||||||||||||| |||||||        |||||||||| |||||||||    
T  27218561 caaactccttttttaaacaaacagagctctaagcgatccaggaaattttcctgttatcctcactacctccccaaaaaaatttattaaacaaagattcaat 27218462  T
Q  229 gatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    || ||| |||||||||||||||||||||||||||||||||    
T  27218461 gagagaaattatacctgacggagccttgaagaaggaaagt 27218422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 128 - 265
Target Start/End: Original strand, 34104177 - 34104314
Alignment:
Q  128 ccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaa 227  Q
    ||||| |||||||||||||| ||||||| |||||||| |||||| ||||||||||| ||||||| ||||||||         ||||||| ||||||||||    
T  34104177 ccatactccttacgtaaacatatagagctccaagcaacccaggaaattttcctgttctcctcacgccctccccaaaattttgtattaaaaatagattcaa 34104276  T
Q  228 tgatagagattatacctgacggagccttgaagaaggaa 265  Q
    ||||||| || |||| ||||||||| ||||||||||||    
T  34104277 tgatagaaatgatacttgacggagctttgaagaaggaa 34104314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 48 - 200
Target Start/End: Complemental strand, 39658908 - 39658755
Alignment:
Q  48 cctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattccttacgtaaac 146  Q
    ||||||||||| ||||||| |||||||||||| || || ||||| | ||||||||||| ||||  |||||| ||||| || ||| | ||||| |||||||    
T  39658908 cctctatccaccaacatcctccaacaccatttccctaataaagcacaattaaattcccttaactgcctcacccccaatcctccaaactcctttcgtaaac 39658809  T
Q  147 aaatagagcgccaagcaatccaggagattttcctgttatcctcactccctcccc 200  Q
    |||  |||| ||||||||||||| | ||||| ||||||||||||||||||||||    
T  39658808 aaactgagctccaagcaatccagaaaatttttctgttatcctcactccctcccc 39658755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 19544941 - 19544771
Alignment:
Q  30 accctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccac 128  Q
    |||||||||||||| ||  |||||||||| |||||||||||||||||||| || || || || |||||||| ||||  |||  ||| || || || || |    
T  19544941 accctataccaaaacccatctctatccaccaacatccgccaacaccatttgcctaataaggcactattaaactccctcaactgcctgacccctaaccctc 19544842  T
Q  129 catattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccc 199  Q
    |||| |||||||||||||||||||||| ||||| || ||||||  |||||||||| |||||| ||||||||    
T  19544841 catactccttacgtaaacaaatagagctccaagaaacccaggaagttttcctgttctcctcattccctccc 19544771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 17721370 - 17721475
Alignment:
Q  163 aatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgacggagccttgaagaag 262  Q
    |||||| || ||||| || |||||||||| ||||||||        |||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||    
T  17721370 aatccatgaaatttttcttttatcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaag 17721469  T
Q  263 gaaagt 268  Q
    ||||||    
T  17721470 gaaagt 17721475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 4937487 - 4937428
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  4937487 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 4937428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 11276607 - 11276548
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  11276607 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 11276548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 15653244 - 15653172
Alignment:
Q  30 accctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcc 103  Q
    |||||||||||||  || ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  15653244 accctataccaaa--ccacctctgtccaccaacatccgccaacaccatttacctaacaaagcactattaaattcc 15653172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 46626426 - 46626497
Alignment:
Q  33 ctataccaaaatccgcctctatcca-caacatccgccaacaccatttaccaaacaaagcgctattaaattcc 103  Q
    |||||||| || || ||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  46626426 ctataccacaaaccacctctgtccaacaacatccgccaacaccatttacctaacaaagcactattaaattcc 46626497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 29968755 - 29968813
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| ||||| ||||||||    
T  29968755 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaag 29968813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 31423375 - 31423434
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  31423375 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 31423434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 45993357 - 45993415
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||| | |||||||| | |||||||||||||||||||||| |||||||| |||||    
T  45993357 ttattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaag 45993415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 18317194 - 18317138
Alignment:
Q  211 attaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||| ||||||| || |||||||||||||| ||| || |||||||||||||||||    
T  18317194 attaaaaatagatttaaggatagagattatacttgagggggccttgaagaaggaaag 18317138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 18342352 - 18342297
Alignment:
Q  211 attaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaa 266  Q
    |||||| |||||||||| |||||| || |||| ||| |||||||||||||||||||    
T  18342352 attaaatatagattcaaggatagaaatgatacatgagggagccttgaagaaggaaa 18342297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 13440653 - 13440715
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagc 90  Q
    ||||| |||||| || || ||||||||||| |||||||||||||||||||| || ||||||||    
T  13440653 aacccgataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagc 13440715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 19735299 - 19735357
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  ||||||||||||||| ||||| || |||||||||||    
T  19735299 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaag 19735357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 41340330 - 41340388
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||| | ||||||||||  ||||||||||||| ||| ||| ||||||||||||||    
T  41340330 ttattaaataaagattcaatggaagagattataccttacgaagctttgaagaaggaaag 41340388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 9895537 - 9895617
Alignment:
Q  67 ccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattccttacgtaaaca 147  Q
    ||||||||||||||| | |||| |  |||||||||||| |||| |||||||  |||| || ||||| |||||||| |||||    
T  9895537 ccaacaccatttacctagcaaatcaatattaaattcccttaacttcctcaccgccaaccctccatactccttacgcaaaca 9895617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 23054318 - 23054270
Alignment:
Q  220 agattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||||||||  |||||||||||||||| |||| || ||||||||||||    
T  23054318 agattcaatggaagagattatacctgacagagctttaaagaaggaaagt 23054270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 380489 - 380740
Alignment:
Q  17 ccgcgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctc 115  Q
    ||||||| |||| ||||||||||| || ||  |||||||||| |||||||||||||||||||| || |  ||  | |||||||| ||||  |||  |||     
T  380489 ccgcgcttccagcaccctataccagaaaccatctctatccaccaacatccgccaacaccatttgcctagtaagacactattaaactccctcaactgcctg 380588  T
Q  116 actcccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaa 215  Q
    || |||||||| ||||| ||||||| |||||| ||||||| |||||||| |||||| ||||||||||| ||||  ||||||||||        |||||||    
T  380589 acccccaaacctccatactccttacataaacagatagagctccaagcaacccaggaaattttcctgttctccttgctccctccccaaaaaaaattattaa 380688  T
Q  216 acatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    | ||||||||||||||||| || |||||||| | ||| ||||||||||||||    
T  380689 aaatagattcaatgatagaaatgatacctgatgaagctttgaagaaggaaag 380740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 42259885 - 42260052
Alignment:
Q  34 tataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccata 132  Q
    |||||||||| || ||||||||||| |||||||| |||||||||||||| ||||| ||  ||||||| | |   |||   ||||| |||| ||| |||||    
T  42259885 tataccaaaacccacctctatccaccaacatccgtcaacaccatttacctaacaaggctatattaaacttcgccaactgtctcacccccagacctccata 42259984  T
Q  133 ttccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctcccc 200  Q
     ||||||| |||||||  ||||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  42259985 ctccttacctaaacaagcagagctccaagcaatccaggaaattttccagttatcctcactccctcccc 42260052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 476804 - 476889
Alignment:
Q  20 cgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattccc 104  Q
    ||||||||| |||||||||||||| ||  ||||||| || ||||| ||||||||||||||||| |||||||| |||||||| ||||    
T  476804 cgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaagcactattaaactccc 476889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 23239164 - 23239223
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  23239164 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 23239223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 28535035 - 28534976
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  28535035 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 28534976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 30731673 - 30731614
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  30731673 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 30731614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 42514501 - 42514560
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  42514501 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 42514560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 22094608 - 22094550
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    |||||||| | ||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  22094608 ttattaaataaagattcaatggcagagattatacctgacggagctttgaagaaggaaag 22094550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 8299541 - 8299482
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| |||||||||   ||||||||||||||||||||| ||||| |||||||||    
T  8299541 ttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagt 8299482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 27796265 - 27796324
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  27796265 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 27796324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 13882193 - 13882139
Alignment:
Q  263 gaaagtcccccgaggtcattggcggacagcgcaaatacttctgaaaatgctgatg 317  Q
    |||||||| | ||||||||||| |||||||| ||||||||||| |||||||||||    
T  13882193 gaaagtcctcagaggtcattggaggacagcgaaaatacttctgcaaatgctgatg 13882139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 22437999 - 22438056
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaa 266  Q
    ||||||||||||||||||||   ||||||||||||||| |||||  ||||||||||||    
T  22437999 ttattaaacatagattcaatataagagattatacctgagggagctatgaagaaggaaa 22438056  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 10793231 - 10793279
Alignment:
Q  212 ttaaacatagattcaatgatagagattatacctgacggagccttgaaga 260  Q
    ||||| |||||||||| | ||||||| ||||||||||||||||||||||    
T  10793231 ttaaagatagattcaaggttagagataatacctgacggagccttgaaga 10793279  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 10780982 - 10781041
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||| |||| |||||||||   ||||||||||||||||||||| ||||| |||||||||    
T  10780982 ttatttaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagt 10781041  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 21084689 - 21084720
Alignment:
Q  236 attatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||    
T  21084689 attatacctgacggagccttgaagaaggaaag 21084720  T

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Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 25856798 - 25856739
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||| |||   ||||||||||||||||||||| ||||| |||||||||    
T  25856798 ttattaaacaaagatttaatataagagattatacctgacggagctttgaaaaaggaaagt 25856739  T

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Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 35983150 - 35983091
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  | |||||||||||||| |||| ||||| |||||||||    
T  35983150 ttattaaacaaagattcaatggaaaagattatacctgacagagctttgaaaaaggaaagt 35983091  T

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Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 41590897 - 41590928
Alignment:
Q  236 attatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||    
T  41590897 attatacctgacggagccttgaagaaggaaag 41590928  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 19506779 - 19506837
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  ||||||||||||||| ||||| || |||||||||||    
T  19506779 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaag 19506837  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 31864834 - 31864892
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaaca 86  Q
    |||||||||||| || || ||||||||||| ||||||| ||||||||||||||| ||||    
T  31864834 aaccctataccataagcctcctctatccactaacatcctccaacaccatttacctaaca 31864892  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 33170439 - 33170497
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  | ||||||||||||||||||| ||||| ||||||||    
T  33170439 ttatttaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaag 33170497  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 35122047 - 35121989
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaag 267  Q
    ||||| |||| ||||||||||  ||||||||||||||| ||||| || |||||||||||    
T  35122047 ttattcaacaaagattcaatggaagagattatacctgaaggagctttaaagaaggaaag 35121989  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 10486430 - 10486349
Alignment:
Q  58 caacatccgccaacaccatttacc-aaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattcctt 138  Q
    ||||||||||||||||||||| || ||||||||| |||||||| |||   ||| | ||||| |||||||| ||||| |||||    
T  10486430 caacatccgccaacaccatttccctaaacaaagcactattaaactccttcaactttctcacccccaaacctccatactcctt 10486349  T

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Target: scaffold0043 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 34158 - 33930
Alignment:
Q  20 cgctaccagaaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcact 118  Q
    ||||||||| |||||||||||||| ||  |||| || || ||||| |||||||||| |||||| |||||||| |||||||| ||||  | |   ||||||    
T  34158 cgctaccagcaccctataccaaaaaccatctctctctaccaacattcgccaacaccttttacctaacaaagcactattaaactccctcagctgtctcact 34059  T
Q  119 cccaaaccaccatattccttacgtaaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaaca 218  Q
    ||||| || ||||| |||||  ||||||||| ||||  |||||| | | |||| ||||||||||||||||||||||||||||        |||||||| |    
T  34058 cccaaccctccatactccttttgtaaacaaacagagttccaagcgacctaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaa 33959  T
Q  219 tagattcaatgatagagattatacctgac 247  Q
    |||||||||||| ||||||||||||||||    
T  33958 tagattcaatgacagagattatacctgac 33930  T

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Target: scaffold0048 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 58 - 267
Target Start/End: Complemental strand, 63809 - 63601
Alignment:
Q  58 caacatccgccaacaccatttaccaaacaaagcgctattaaattcccgtaacctcctcactcccaaaccaccatattccttacgtaaacaaatagagcgc 157  Q
    ||||||||||||||||||||| || | ||||||   |||||| ||||  |||  ||| || ||||| || |||   |||||  |||||||||||||||      
T  63809 caacatccgccaacaccatttccctagcaaagctaaattaaactccctcaactgcctaacccccaaccctccaccctccttcagtaaacaaatagagctt 63710  T
Q  158 caagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattatacctgacggagccttga 257  Q
    |||| || |||||| ||||||||||||||||||||||||||||        || | ||| ||||||||||||  ||||||||||||||| | ||||||||    
T  63709 caagtaaaccaggaaattttcctgttatcctcactccctccccaaaaaaaatt-taaaaaatagattcaatggaagagattatacctgaagaagccttga 63611  T
Q  258 agaaggaaag 267  Q
    ||||||||||    
T  63610 agaaggaaag 63601  T

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Target: scaffold0189 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 6805 - 6930
Alignment:
Q  142 taaacaaatagagcgccaagcaatccaggagattttcctgttatcctcactccctccccnnnnnnnnttattaaacatagattcaatgatagagattata 241  Q
    |||||||||||||| ||||  ||||||||| ||||||||||||  ||||| |||||||          ||||||| ||||||||||||| ||| || |||    
T  6805 taaacaaatagagctccaataaatccaggaaattttcctgttagactcacaccctcccaaaaaaaaagtattaaaaatagattcaatgagagaaatgata 6904  T
Q  242 cctgacggagccttgaagaaggaaag 267  Q
    ||||||||||| ||||| ||||||||    
T  6905 cctgacggagctttgaaaaaggaaag 6930  T

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Target: scaffold0472 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 4033 - 4092
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  4033 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 4092  T

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Target: scaffold0418 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 8208 - 8279
Alignment:
Q  33 ctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaattcc 103  Q
    |||||||| || || ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  8208 ctataccacaaaccacctctgtccaccaacatccgccaacaccatttacctaacaaagcactattaaattcc 8279  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 105202 - 105143
Alignment:
Q  209 ttattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagt 268  Q
    |||||||||| ||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  105202 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagt 105143  T

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Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 134394 - 134323
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaa 99  Q
    |||||||||||| || ||  |||||||||| |||||||||||||||||||| || |||||||| ||||||||    
T  134394 aaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaa 134323  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 312221 - 312150
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaa 99  Q
    |||||||||||| || ||  |||||||||| |||||||||||||||||||| || |||||||| ||||||||    
T  312221 aaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaa 312150  T

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Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 327675 - 327604
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaa 99  Q
    |||||||||||| || ||  |||||||||| |||||||||||||||||||| || |||||||| ||||||||    
T  327675 aaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaa 327604  T

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Target: scaffold1809 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 1136 - 1100
Alignment:
Q  232 agagattatacctgacggagccttgaagaaggaaagt 268  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1136 agagattatacctgatggagccttgaagaaggaaagt 1100  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 4096 - 4025
Alignment:
Q  29 aaccctataccaaaatccgcctctatccac-aacatccgccaacaccatttaccaaacaaagcgctattaaa 99  Q
    |||||||||||| || ||  |||||||||| |||||||||||||||||||| || |||| ||| ||||||||    
T  4096 aaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacagagcactattaaa 4025  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 267
Target Start/End: Original strand, 28582 - 28613
Alignment:
Q  236 attatacctgacggagccttgaagaaggaaag 267  Q
    ||||||||||||||||||||||||||||||||    
T  28582 attatacctgacggagccttgaagaaggaaag 28613  T

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