View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7914_low_1 (Length: 440)
Name: NF7914_low_1
Description: NF7914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7914_low_1 |
 | |
|
| [»] scaffold0182 (2 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 389; Significance: 0; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 14 - 418
Target Start/End: Original strand, 21772074 - 21772478
Alignment:
| Q |
14 |
tagcagagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatga |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21772074 |
tagcagagaagtacaaacttatgtgggcagcaaaatacatagaaaataacggatacattccagaggatctacacaaaaagattgctgataacattgatga |
21772173 |
T |
|
| Q |
114 |
actgaagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtg |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21772174 |
actgaagggtcattttgacgatgatgttttaacttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtg |
21772273 |
T |
|
| Q |
214 |
gatggatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatg |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21772274 |
gatggatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatg |
21772373 |
T |
|
| Q |
314 |
tgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatgatgaatttcctcga |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
21772374 |
tgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgagagtggcttgatagaaagcatgatgaatttcctcga |
21772473 |
T |
|
| Q |
414 |
ctgtc |
418 |
Q |
| |
|
||||| |
|
|
| T |
21772474 |
ctgtc |
21772478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 14 - 414
Target Start/End: Original strand, 21726009 - 21726409
Alignment:
| Q |
14 |
tagcagagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatga |
113 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21726009 |
tagcagagtagtacaaacttatgtgggcagcaaaatacatagaaaacaccggacacattccagaggatctacacaaaaagattgctgataacattgatga |
21726108 |
T |
|
| Q |
114 |
actgaagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtg |
213 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21726109 |
actgaagggtcattttgacgacgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagctgtcgtggatgttgttcgtg |
21726208 |
T |
|
| Q |
214 |
gatggatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatg |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
21726209 |
gatggatgttctttgctgtatatcttggagaaagcggatcttaataaaccatggcacatgaatattagggttgatcaactggttcttgtgatgatggatg |
21726308 |
T |
|
| Q |
314 |
tgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatgatgaatttcctcga |
413 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
21726309 |
tgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggacagatgaagacgagagtggattgatagaaagcatgatgaatttcgtcga |
21726408 |
T |
|
| Q |
414 |
c |
414 |
Q |
| |
|
| |
|
|
| T |
21726409 |
c |
21726409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 18 - 418
Target Start/End: Original strand, 21714300 - 21714700
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21714300 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaccagacacattccagaggatctacacaaaaagattgcagataacattgatgaactg |
21714399 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
21714400 |
aagggtcattttgacaacgatgttttagcttcaaccagttggtctcttgaaggctttggtagccttgaagaaaagctatcgtggatgttgttcgtggatg |
21714499 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgct |
317 |
Q |
| |
|
||||||||||||| |||||||||||| ||| || ||| |||||||| |||| |||||||| |||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
21714500 |
gatgttctttgcttcatatcttggagagagccaagcttgatgaaccagggcaaatgaatatcaaggttgatcaacttgttcttgtaatgatggatgtgct |
21714599 |
T |
|
| Q |
318 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgt |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
21714600 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagaccagagtggattgataaaaagcatgatgaatttcctcgcctgt |
21714699 |
T |
|
| Q |
418 |
c |
418 |
Q |
| |
|
| |
|
|
| T |
21714700 |
c |
21714700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 18 - 418
Target Start/End: Original strand, 21788346 - 21788743
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
21788346 |
agagaagtacaagcttatgtgggcagcaaaatacatcgaaaacactggacacattccagaggatctgcacaaaaagattgcagataacattgatgaactg |
21788445 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
||||||||||||| ||| ||||||||| ||| ||| | |||||||| ||||||| | ||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
21788446 |
aagggtcattttggcgacgatgttttaactttaactggcaagtctcttgaaggctttggaagcctcgaagaaaagctgtcgtggatgttgttcgtggatg |
21788545 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgct |
317 |
Q |
| |
|
||||||||||| |||||||||| |||||||| || ||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
21788546 |
gatgttctttgttgtatatcttagagaaagccaagcttgatgaacctgggcacatgaatattaaagttgatcaactggttcttgtgatgatggatgtgct |
21788645 |
T |
|
| Q |
318 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgt |
417 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||||| |||||||||||| ||||||||||||| |
|
|
| T |
21788646 |
tctgttggagaatcaacttccttacgtagtactcaagctattgtggaaagat---aacgatagtgaattgataaaaagcatgatgactttcctcgactgt |
21788742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 18 - 418
Target Start/End: Original strand, 21681767 - 21682167
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||| ||| ||||| | |||||||| ||||||| ||||||||||||||||||||| || |
|
|
| T |
21681767 |
agagaagtacaagcttatgtgggcagcaaaatacatcaaaaacactggaagcattcaaaaggatctatacaaaaaaattgctgataacattgatgaattg |
21681866 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
||||| |||||| ||| ||||||||| ||| |||| | |||||||| ||||| || |||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
21681867 |
aagggccattttagcgacgatgttttaactttaaccggcgagtctcttgaaggctatcatagccttgaagaaaagttatcatggatgttgttcgtggatg |
21681966 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgct |
317 |
Q |
| |
|
||||||||||||| |||||||||||||| | | ||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21681967 |
gatgttctttgctacatatcttggagaaaaccatgctttatgaaccagggcacatgaatgttaaggttgatcaactggttcttgtgatgatggatgtgct |
21682066 |
T |
|
| Q |
318 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgt |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||| ||||||| ||| |||| |||||||||||||||| |
|
|
| T |
21682067 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatagcaatgagagtgaattgataaaaattatgacgaatttcctcgactgt |
21682166 |
T |
|
| Q |
418 |
c |
418 |
Q |
| |
|
| |
|
|
| T |
21682167 |
c |
21682167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 411
Target Start/End: Original strand, 21785523 - 21785916
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||| | || || | || || |||| |||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
21785523 |
agagaagtacaagcttatgtgggccgcaaaatacctcgagaatataggccgcaatccacgcgatctacacaaaaagattgccgataacattaatgaactg |
21785622 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| |||| | |||||||| || |||| ||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
21785623 |
aagggtcattttagcgatgatgttttaactttaaccggccagtctcttgaagactttggtagccttgaagaaaagctgtcgtggatgttgtttgtggatg |
21785722 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgct |
317 |
Q |
| |
|
||||||||||||| |||||||||||||||| || ||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21785723 |
gatgttctttgctacatatcttggagaaagccaagcttcatgtaccagggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgct |
21785822 |
T |
|
| Q |
318 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatgatgaatttcctc |
411 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||| |||| ||||||| ||||||||| |||||||||| |
|
|
| T |
21785823 |
tttgttggagaatcaacttccttatgaagtcctcaaactattgtggaaagatagcgacgagagtgaattgataaaaagcatgaagaatttcctc |
21785916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 18 - 369
Target Start/End: Original strand, 21628242 - 21628596
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||| ||| |||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21628242 |
agagaagtacaagcttgtgtgggcatcaaaatacatagaaaacattggacttattccagaggaactacacaaaaagattgctgataacattgatgaactg |
21628341 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
||||||| |||| ||| ||||||||| || ||| || |||||| ||||||| | |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21628342 |
aagggtcgttttagcgacgatgttttaaatttaacgggaaactctcttcaaggctttggatgccttgaagaaaagctgtcgtggatgttgttcgtggatg |
21628441 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaag---cgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgt |
314 |
Q |
| |
|
|||| |||||||| |||||||||||||||| || ||||||| ||| ||| ||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21628442 |
gatgctctttgctttatatcttggagaaagttacgttgtttaatgacccaaggcctatggatattaagcttgatcaactggttcttgtgatgatggatgt |
21628541 |
T |
|
| Q |
315 |
gcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagat |
369 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
21628542 |
gcttttgttggagaatcaacttccttatgaagtactcaagctattgtggaaagat |
21628596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 18 - 368
Target Start/End: Original strand, 21652186 - 21652527
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||| |||| || ||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||||||||||| ||||| ||| | ||||| |
|
|
| T |
21652186 |
agaggagtataagcttatgtgggcagcaaaatacatagaaaacaacggctttattctagaggatcgacacaaaaagattgccgataaaattaacgaacta |
21652285 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
|||||||||||| ||| ||||||||| ||| ||| | |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21652286 |
aagggtcattttagcgacgatgttttaactttaactggcaagtctcttgaaggctttgatagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
21652385 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgct |
317 |
Q |
| |
|
||||||| |||||| |||||||||||||||| || || ||||| || ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
21652386 |
gatgttcgttgctgcatatcttggagaaagccaacgttgatgaagcagggcacatgaatattaaggttgatcaac---------tgatgatggatgtgct |
21652476 |
T |
|
| Q |
318 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaaga |
368 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21652477 |
tttgttggaaaatcaacttccttatcaagtactcaagcttttgtggaaaga |
21652527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 21 - 408
Target Start/End: Original strand, 21664218 - 21664614
Alignment:
| Q |
21 |
gaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactgaag |
120 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| | || || |||| ||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
21664218 |
gaagtacaagcttatgtgggcagcaaaatacattgaaaatacaagactcaatccacgggatctacacaaaaagatttttgataacatcgatgaactgaag |
21664317 |
T |
|
| Q |
121 |
ggtcattttgacgatgatgt---tttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
|||||||||||||||||||| |||| ||| |||| | |||||||| ||||||| | ||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
21664318 |
ggtcattttgacgatgatgtaattttaactttaaccggcaagtctcttgaaggctttggaagccttgaagaaaagctgtcgtggatattgttcgtggatg |
21664417 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttgga-gaaag-----cgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatgga |
311 |
Q |
| |
|
|||| |||||||| ||||||||||| | | | || | |||| ||| || ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21664418 |
gatgctctttgctttatatcttggatggatgttgtacgtggatggatgacccagagcctatggatattaaggttgatcaactggttcttgtgatgatgga |
21664517 |
T |
|
| Q |
312 |
tgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatgatgaatttc |
408 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |
|
|
| T |
21664518 |
tgtgcttttgttggagaatcaactaccttatcaagtactcaagctattgtggaaagatgaagacaagagtggattgatagaaagcatcatgaatttc |
21664614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 18 - 400
Target Start/End: Original strand, 21992299 - 21992681
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||| ||||| ||| | |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21992299 |
agagaagtacaagcttacgtgggcagcaaaatacatcgaaaatgcaggacttaatccatgcgatctacacaaaaagattatcgataacattgatgaactg |
21992398 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
|||||||||||| || ||||||||| ||| | | || |||||||| ||||||| | ||||| ||||||||| |||| ||||||||||||||||||| |
|
|
| T |
21992399 |
aagggtcattttagtgacgatgttttaactttagctggaaagtctcttgaaggctttggaagcctcgaagaaaagctgtcatggatgttgttcgtggatg |
21992498 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgct |
317 |
Q |
| |
|
||||||||||| |||||||||| |||||||| || ||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
21992499 |
gatgttctttgttgtatatcttagagaaagccaagcttgatgaacctgggcacatgaatattaaagttgatcaactggttcttgtgatgatggatgtgct |
21992598 |
T |
|
| Q |
318 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatga |
400 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||||||||||||| | | || |||| ||||||| ||||||||| |
|
|
| T |
21992599 |
tctgttggagaatcaacttccttacgtagtactcaagctattgtggaaagataacaatgagagtgaattgataaaaagcatga |
21992681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 18 - 366
Target Start/End: Original strand, 21764179 - 21764509
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||| |||| |||||||||| ||||||||||||||| || | | ||||||||| |||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
21764179 |
agagaagtacaagcttaagtgggcagcagaatacatagaaaacaccgcacttaatccagaggaactacaccaaaagattgctgataacatcgatgaactg |
21764278 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
||||||| |||| ||||||||||||| ||| ||| || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21764279 |
aagggtcgttttagcgatgatgttttaactttaactggaaagtctcttgaaggctttcatagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
21764378 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgct |
317 |
Q |
| |
|
|||| |||||||| ||| |||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21764379 |
gatgctctttgctttatctcttggagaaag------------------ggcacatgaagattaaggttggtcaactggttcttgtgatgatggatgtgct |
21764460 |
T |
|
| Q |
318 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaa |
366 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21764461 |
tttgttggagaatcaacttccttacgaagtactcaagctattgtggaaa |
21764509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 18 - 369
Target Start/End: Original strand, 21623310 - 21623661
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||| | || | ||| ||||| | ||||| |||||||||||||| |||||||||||| |
|
|
| T |
21623310 |
agagaagtacaagcttatgtgggcagcaaaatacatcaaaaacaccagaaaagttcagaaggatatgcacaacaagattgctgataatattgatgaactg |
21623409 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
|||||||||||| || ||||||||| ||| |||| || |||||||| ||||||| ||||| || |||||||| |||||||||||||||||||||||| |
|
|
| T |
21623410 |
aagggtcattttagtgacgatgttttaactttaaccggaaagtctcttgaaggctttggtagcattaaagaaaagctgtcgtggatgttgttcgtggatg |
21623509 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgct |
317 |
Q |
| |
|
|||||||||||||| ||||| |||| | ||| || ||| |||||||| |||| |||||||||||| ||||||||| | |||||||||||| |||||| | |
|
|
| T |
21623510 |
gatgttctttgctgcatatcatggatacagccaagcttcatgaaccagggcagatgaatattaagcttgatcaacggaatcttgtgatgattgatgtggt |
21623609 |
T |
|
| Q |
318 |
tttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagat |
369 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
21623610 |
tttgttggagaatcaactgccttatgaagtactcaagctattgtggaaagat |
21623661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 419
Target Start/End: Complemental strand, 21808196 - 21807792
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||| ||||||||| | || |||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
21808196 |
agagaagtacaagcttatgtggtctgcgaaatacatagaaaacagcggctttattctagaggatctacacaaaaagattgctgataacatcgatgaactg |
21808097 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
||||||||||||| ||| ||||||||| ||| |||| | |||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
21808096 |
aagggtcattttggcgacgatgttttaactttaaccggccagtctcttgaaggctttggtagccttgaagaaaagctgtcatggatgttgttcgtggatg |
21807997 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaag---cgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgt |
314 |
Q |
| |
|
|||| |||||||| ||||||||||||| || | || |||| ||| |||| || |||||||| ||||||||||||||||| |||| | |||||| |
|
|
| T |
21807996 |
gatgctctttgctttatatcttggagacagtcatgtggtttgatgagccagggcatgtggatattaagcttgatcaactggttcttctgataacggatgt |
21807897 |
T |
|
| Q |
315 |
gcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatgatgaatttcctcgac |
414 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||| | | || ||| ||||||| ||| ||||| |||||||| | || |
|
|
| T |
21807896 |
gcttttgttggagaatcaactgccttataaagtacttaagctattgtgggaagataacaatgagggtgaattgataaaaatcatgaggaatttccccaac |
21807797 |
T |
|
| Q |
415 |
tgtct |
419 |
Q |
| |
|
||||| |
|
|
| T |
21807796 |
tgtct |
21807792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 369
Target Start/End: Original strand, 21646860 - 21647215
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||| |||||| ||| ||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21646860 |
agagaaatacaagcttatgtgggcagcaaaatacatcaaaaacacgggaagaattaagaaggatctacacaaaaagattgtagataacattgatgaactg |
21646959 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggat- |
216 |
Q |
| |
|
|||||||||||| ||| || |||||| ||| ||| | ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
21646960 |
aagggtcattttagcgacgacgttttaactttgaccggcaagtctcttaaaggcttccgtagccttgaagaaaagttgtcgtggatattgttcgtggata |
21647059 |
T |
|
| Q |
217 |
---ggatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatg |
313 |
Q |
| |
|
||||||||||||||| ||||||| |||||||| || ||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21647060 |
tatggatgttctttgctgcatatcttagagaaagccaagcttcatgaaccagggcagatgaatattaaggttgataaactggttcttgtgatgatggatg |
21647159 |
T |
|
| Q |
314 |
tgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagat |
369 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||| ||||| | ||||||| |
|
|
| T |
21647160 |
tgcttttgttggagaatcaactcccttacatagtactcaaactattattgaaagat |
21647215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 419
Target Start/End: Original strand, 21689530 - 21689931
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagagg-atctacacaaaaagattgctgataacattgatgaact |
116 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||| ||| ||||| ||||| ||||||||||||| |||| ||||||||||||| |||| |
|
|
| T |
21689530 |
agagaagtacaagcttatgtgggcagcaaaatacatcaaaaacactggaagcattc-agagggatctacacaaaaacattgttgataacattgataaact |
21689628 |
T |
|
| Q |
117 |
gaagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggat |
216 |
Q |
| |
|
||||||||||||||| || ||||||||| | | ||| || ||||| | ||||||| ||| |||||||||||| | |||||||||||||| |||||| |
|
|
| T |
21689629 |
gaagggtcattttgatgacgatgttttaacattgaccggaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggat |
21689728 |
T |
|
| Q |
217 |
ggatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgc |
316 |
Q |
| |
|
||||| |||||||| |||||||||||||||| | ||| ||||||| ||| ||| ||||||||||||||||||| | | |||||||| ||||||||| |
|
|
| T |
21689729 |
ggatgctctttgctttatatcttggagaaagacaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgc |
21689828 |
T |
|
| Q |
317 |
ttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactg |
416 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||| ||||||||||||||||| | || | |||| ||||||| |||||| || |||||||||||| || |
|
|
| T |
21689829 |
ttttgttagagaatcaacttccttatgaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcacgacgaatttcctcgagtg |
21689928 |
T |
|
| Q |
417 |
tct |
419 |
Q |
| |
|
||| |
|
|
| T |
21689929 |
tct |
21689931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 18 - 400
Target Start/End: Original strand, 21704760 - 21705136
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactg |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21704760 |
agagaagtacaagcttatgtgggcagcaaaatacatagaaaacaccggacttattccagaggaactacacaaaaagattgcagataacattgatgaactg |
21704859 |
T |
|
| Q |
118 |
aagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatg |
217 |
Q |
| |
|
||||||| |||| ||||||||||||| || |||| || |||||| ||||||| ||||||| |||||| |||||||||| |||||| |||||| |
|
|
| T |
21704860 |
aagggtcgttttagcgatgatgttttaactctaaccggaaactctcttcaaggctttgagtgccttgatgaaaagctgtcgtggatattgttcatggatg |
21704959 |
T |
|
| Q |
218 |
gatgttctttgctgtatatcttggagaaagcgaatcttaatgaacc-atggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgc |
316 |
Q |
| |
|
||||||||||||| |||||||||| || | | ||| ||| | || ||||||||||||||||||||||||| |||||||| | |||||||| |
|
|
| T |
21704960 |
gatgttctttgctccatatcttggataa-------cattatgtacctactgccgatgaatattaaggttgatcaactggctcttgtgagggaggatgtgc |
21705052 |
T |
|
| Q |
317 |
ttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatga |
400 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| || |||||||| ||| ||||||||| |
|
|
| T |
21705053 |
ttttgttggagaatcaactgccttatgaagtactcaagcttttgtggaaagatgaagatgagagtggattaataaaaagcatga |
21705136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 369
Target Start/End: Original strand, 15713741 - 15714085
Alignment:
| Q |
19 |
gagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactga |
118 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| |||||| ||| ||||| |||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
15713741 |
gagaagtacaagcttatgtgggcggcaaaatacatcaaaaacactggaagcattctagaggaactgcacaaaaagattgctgataacattgatgaactga |
15713840 |
T |
|
| Q |
119 |
agggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatgg |
218 |
Q |
| |
|
|| |||||||| || ||||||||| ||| |||| || ||| ||| ||| ||| ||||||| ||||||||| |||| |||||||||||||||||||| |
|
|
| T |
15713841 |
agtgtcattttagtgacgatgttttaactttaaccggaaagtcacttcaaggatttggtagcctagaagaaaagctgtcatggatgttgttcgtggatgg |
15713940 |
T |
|
| Q |
219 |
atgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgctt |
318 |
Q |
| |
|
||| ||||||||| |||||||||| || | | || | | || ||| ||| ||||||||| |||||||||||| ||||||||| |||||||||||| |
|
|
| T |
15713941 |
atgctctttgctgcatatcttggataa---cattgttcacg---cagggcccataaatattaagcttgatcaactggatcttgtgataatggatgtgctt |
15714034 |
T |
|
| Q |
319 |
ttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagat |
369 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
15714035 |
ttgttggagaatcaacttccttatgaagtactcaagctattgtggaaagat |
15714085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 31 - 390
Target Start/End: Original strand, 21745662 - 21746015
Alignment:
| Q |
31 |
cttatgtgggcagcaaaatacatagaaaacaacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactgaagggtcattttg |
130 |
Q |
| |
|
||||||||||||||||||||| | || || | || ||| |||| | ||||| ||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
21745662 |
cttatgtgggcagcaaaatacctcgagaatacaggccacaatccacacgatctgcacaaaaagattgttgataacattgatgaactgaagggtcgtttta |
21745761 |
T |
|
| Q |
131 |
acgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatggatgttctttgct |
230 |
Q |
| |
|
||| ||||||||| ||| ||| || |||||| ||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
21745762 |
gcgacgatgttttaactttaactggaaattctcttcaaggctttgaatgccttgaagaaaagctgtcgtggatgttattcgtagatggatgttctttgct |
21745861 |
T |
|
| Q |
231 |
gtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaat |
330 |
Q |
| |
|
|||||||||| || || | | ||| | |||||||||||||| |||||| | | ||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
21745862 |
ccatatcttggataaca------ttgttcacccacgagacatgaatattaagcttgatctagttattcttgtgatgatcgatgtacttttgttggagaat |
21745955 |
T |
|
| Q |
331 |
caacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgata |
390 |
Q |
| |
|
||||| |||||| |||||||| |||||||||| |||||| | |||| |||| ||||||| |
|
|
| T |
21745956 |
caactgccttatgaagtactctagctattgtgaaaagataacaacgagagtgaattgata |
21746015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 21792128 - 21792356
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaacaacggata-cattccagaggatctacacaaaaagattgctgataacattgatgaact |
116 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||||||| |||| ||| || | ||||| | ||||| |||||||||||||| |||||||||||| || |
|
|
| T |
21792128 |
agagaagtacaagcttatgtgggcagcagaatacatcaaaaa-aactgaaagcattctgaaagatctgcacaaaaagattgccgataacattgatacgct |
21792226 |
T |
|
| Q |
117 |
gaagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggat |
216 |
Q |
| |
|
||||| || |||| ||||||||||||| ||| |||| | |||||||| |||||| ||||||| ||||||||| |||| ||||| |||||||||||| |
|
|
| T |
21792227 |
gaaggatcgttttagcgatgatgttttaactttaacccgcaagtctcttgacggctttggtagcctcgaagaaaagctgtcatggatattgttcgtggat |
21792326 |
T |
|
| Q |
217 |
ggatgttctttgctgtatatcttggagaaa |
246 |
Q |
| |
|
|||||||||||| || |||||||||||||| |
|
|
| T |
21792327 |
ggatgttctttgttgcatatcttggagaaa |
21792356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 299 - 408
Target Start/End: Original strand, 21792388 - 21792497
Alignment:
| Q |
299 |
ttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcat |
398 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || || | |||| ||| ||||||||||| |
|
|
| T |
21792388 |
ttgtgatgatggatgtgcttttgttggagaatcaactgccttatgaagtactcaagctattgtggaaagacgacaaccagagtgcattaatagaaagcat |
21792487 |
T |
|
| Q |
399 |
gatgaatttc |
408 |
Q |
| |
|
|| ||||||| |
|
|
| T |
21792488 |
gacgaatttc |
21792497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 400
Target Start/End: Original strand, 21656895 - 21656950
Alignment:
| Q |
345 |
agtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatga |
400 |
Q |
| |
|
||||||||||||||||||||||||||| || | |||| ||||||| ||||||||| |
|
|
| T |
21656895 |
agtactcaagctattgtggaaagatgacaacaagagtgaattgataaaaagcatga |
21656950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 116 - 400
Target Start/End: Original strand, 25588 - 25872
Alignment:
| Q |
116 |
tgaagggtcattttgacgatgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtgga |
215 |
Q |
| |
|
|||||||||||||| ||| ||||||||| ||| ||| | | |||||||| ||||||| ||| ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
25588 |
tgaagggtcattttagcgaggatgttttaactttaactaaaaagtctcttgaaggctttggtacccttgaagaaaagctgtcgttgatgttgttcgtgga |
25687 |
T |
|
| Q |
216 |
tggatgttctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtg |
315 |
Q |
| |
|
||||||||||||||| ||||||||||||| || | | |||| | ||| || | ||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
25688 |
tggatgttctttgctacatatcttggagaatgccagacgtaataacccagggaaaatgaatattaaggttgatcaactttttcttgtgatggtggatgtg |
25787 |
T |
|
| Q |
316 |
cttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatga |
400 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||| | || | || |||| ||||||| ||||||||| |
|
|
| T |
25788 |
gttttgttggaaaatcaacttccttatgaagtactcaagctattgtggaaaaacgagaatgagagtgaattgatacaaagcatga |
25872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 25427 - 25470
Alignment:
| Q |
18 |
agagaagtacaaacttatgtgggcagcaaaatacatagaaaaca |
61 |
Q |
| |
|
|||||||||||| |||| |||||||||| ||||||||||||||| |
|
|
| T |
25427 |
agagaagtacaagcttaagtgggcagcagaatacatagaaaaca |
25470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 18192210 - 18192138
Alignment:
| Q |
72 |
tccagaggatctacacaaaaagattgctgataacattgatgaactgaagggtcattttgacgatgatgtttta |
144 |
Q |
| |
|
|||| |||||||| || || | ||||| ||||||||| ||||||||||||||| ||||| ||| ||||||||| |
|
|
| T |
18192210 |
tccaaaggatctataccaagatattgcagataacattaatgaactgaagggtctttttgccgacgatgtttta |
18192138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 18192104 - 18192060
Alignment:
| Q |
184 |
gaagaaaagttgtcgtggatgttgttcgtggatggatgttctttg |
228 |
Q |
| |
|
||||||||| | || ||||||||||| |||||||||||||||||| |
|
|
| T |
18192104 |
gaagaaaagctatcatggatgttgtttgtggatggatgttctttg |
18192060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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