View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7918_high_9 (Length: 205)

Name: NF7918_high_9
Description: NF7918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7918_high_9
NF7918_high_9
[»] chr3 (37 HSPs)
chr3 (96-205)||(48375626-48375735)
chr3 (91-205)||(26754766-26754880)
chr3 (93-205)||(8076464-8076576)
chr3 (91-200)||(30801648-30801757)
chr3 (91-200)||(41189679-41189788)
chr3 (98-205)||(53982082-53982189)
chr3 (90-205)||(26141444-26141561)
chr3 (92-198)||(51419276-51419382)
chr3 (98-205)||(33644271-33644378)
chr3 (90-200)||(20764829-20764939)
chr3 (98-203)||(54868817-54868922)
chr3 (94-200)||(11347840-11347946)
chr3 (91-204)||(24699870-24699982)
chr3 (93-205)||(33118767-33118880)
chr3 (92-200)||(45058469-45058577)
chr3 (98-205)||(52629371-52629478)
chr3 (91-197)||(47531944-47532050)
chr3 (98-205)||(17470476-17470583)
chr3 (98-201)||(31456764-31456867)
chr3 (94-200)||(36331247-36331353)
chr3 (94-200)||(11907447-11907549)
chr3 (91-191)||(35536711-35536811)
chr3 (94-201)||(14623757-14623864)
chr3 (136-191)||(41080792-41080847)
chr3 (98-205)||(49607485-49607592)
chr3 (90-203)||(1758373-1758483)
chr3 (91-201)||(13897970-13898080)
chr3 (94-204)||(35965700-35965810)
chr3 (98-198)||(25395256-25395355)
chr3 (92-200)||(42823187-42823295)
chr3 (98-205)||(9563070-9563177)
chr3 (94-191)||(8956847-8956944)
chr3 (94-190)||(21746106-21746202)
chr3 (98-186)||(36707350-36707438)
chr3 (91-191)||(43746424-43746524)
chr3 (87-145)||(24688451-24688509)
chr3 (94-200)||(25407065-25407171)
[»] chr2 (37 HSPs)
chr2 (92-203)||(3440052-3440163)
chr2 (94-201)||(3738018-3738125)
chr2 (94-205)||(20700886-20700997)
chr2 (98-205)||(13438414-13438521)
chr2 (94-205)||(26891422-26891533)
chr2 (98-205)||(28381577-28381684)
chr2 (93-200)||(40613819-40613926)
chr2 (93-200)||(42257269-42257376)
chr2 (98-205)||(10249304-10249411)
chr2 (98-205)||(17473091-17473198)
chr2 (93-200)||(17823864-17823971)
chr2 (98-205)||(28863526-28863633)
chr2 (98-205)||(30915534-30915641)
chr2 (98-205)||(32505570-32505677)
chr2 (94-200)||(43490197-43490303)
chr2 (91-200)||(38732430-38732539)
chr2 (98-203)||(40701551-40701656)
chr2 (93-200)||(13365429-13365536)
chr2 (91-186)||(41758677-41758772)
chr2 (94-200)||(36168912-36169018)
chr2 (93-198)||(2533201-2533306)
chr2 (105-205)||(33436029-33436129)
chr2 (98-205)||(7465657-7465764)
chr2 (98-201)||(19930742-19930845)
chr2 (94-200)||(3034901-3035007)
chr2 (94-200)||(38273061-38273166)
chr2 (91-200)||(2997402-2997511)
chr2 (112-201)||(9058555-9058644)
chr2 (98-203)||(4060758-4060863)
chr2 (93-200)||(45097652-45097759)
chr2 (150-203)||(17819978-17820031)
chr2 (148-192)||(33436295-33436339)
chr2 (95-191)||(44152012-44152108)
chr2 (98-196)||(38882733-38882831)
chr2 (152-184)||(2329350-2329382)
chr2 (89-145)||(12302302-12302358)
chr2 (91-191)||(21301415-21301515)
[»] chr8 (34 HSPs)
chr8 (92-205)||(15258845-15258958)
chr8 (94-205)||(37038550-37038661)
chr8 (93-205)||(43414498-43414610)
chr8 (98-205)||(14547993-14548100)
chr8 (94-205)||(8841350-8841461)
chr8 (94-204)||(40467772-40467882)
chr8 (94-205)||(10284549-10284660)
chr8 (95-205)||(5957901-5958011)
chr8 (97-201)||(40423864-40423968)
chr8 (98-205)||(12831118-12831225)
chr8 (98-205)||(504043-504150)
chr8 (97-200)||(16056322-16056425)
chr8 (98-205)||(23122519-23122626)
chr8 (98-205)||(34012218-34012325)
chr8 (98-197)||(34307295-34307394)
chr8 (93-200)||(42221591-42221698)
chr8 (98-200)||(24307715-24307817)
chr8 (94-200)||(32707921-32708029)
chr8 (93-200)||(15048098-15048206)
chr8 (98-205)||(9122256-9122363)
chr8 (94-200)||(4854781-4854887)
chr8 (95-205)||(25838260-25838370)
chr8 (91-188)||(42354503-42354600)
chr8 (106-194)||(1179870-1179958)
chr8 (98-205)||(15197404-15197511)
chr8 (98-200)||(30479396-30479498)
chr8 (98-180)||(42710216-42710298)
chr8 (148-204)||(20074914-20074970)
chr8 (94-192)||(32032808-32032906)
chr8 (144-195)||(10621055-10621106)
chr8 (133-200)||(16383453-16383520)
chr8 (96-201)||(17443900-17444005)
chr8 (124-205)||(44507035-44507116)
chr8 (92-164)||(30183792-30183864)
[»] chr4 (35 HSPs)
chr4 (93-205)||(50052345-50052457)
chr4 (90-205)||(29239957-29240072)
chr4 (93-205)||(50526088-50526200)
chr4 (95-205)||(48647645-48647755)
chr4 (98-205)||(24995029-24995136)
chr4 (98-205)||(41236418-41236525)
chr4 (98-205)||(42044289-42044396)
chr4 (91-200)||(19670631-19670740)
chr4 (92-200)||(31910268-31910376)
chr4 (94-205)||(41823953-41824064)
chr4 (98-205)||(48182971-48183078)
chr4 (111-205)||(480382-480476)
chr4 (96-200)||(40574855-40574959)
chr4 (98-205)||(6034115-6034222)
chr4 (110-205)||(54473467-54473562)
chr4 (90-200)||(47986284-47986393)
chr4 (94-200)||(55475267-55475373)
chr4 (91-200)||(17983658-17983767)
chr4 (92-201)||(28480184-28480293)
chr4 (92-201)||(28481059-28481168)
chr4 (92-201)||(28481934-28482043)
chr4 (93-198)||(44536663-44536768)
chr4 (98-205)||(11511385-11511491)
chr4 (91-194)||(18924410-18924513)
chr4 (150-205)||(29234219-29234274)
chr4 (93-200)||(29547876-29547983)
chr4 (94-197)||(50813810-50813913)
chr4 (98-201)||(53352496-53352591)
chr4 (91-200)||(29589655-29589764)
chr4 (98-205)||(23608306-23608413)
chr4 (93-200)||(32767034-32767141)
chr4 (92-205)||(3481725-3481828)
chr4 (96-141)||(30036994-30037039)
chr4 (92-129)||(32939588-32939625)
chr4 (96-200)||(29977961-29978065)
[»] chr1 (32 HSPs)
chr1 (94-205)||(6260941-6261052)
chr1 (94-205)||(51898601-51898712)
chr1 (94-205)||(32813318-32813429)
chr1 (98-205)||(27564657-27564764)
chr1 (98-205)||(3000390-3000497)
chr1 (98-205)||(38595225-38595332)
chr1 (98-205)||(47452242-47452349)
chr1 (136-205)||(48489371-48489440)
chr1 (105-205)||(50630529-50630629)
chr1 (91-198)||(11152293-11152400)
chr1 (98-205)||(48716204-48716311)
chr1 (108-205)||(38632253-38632350)
chr1 (91-200)||(45044475-45044584)
chr1 (92-200)||(5958916-5959024)
chr1 (98-205)||(2581986-2582093)
chr1 (98-205)||(41758876-41758983)
chr1 (94-200)||(41608411-41608517)
chr1 (96-194)||(49811447-49811545)
chr1 (94-200)||(50590918-50591024)
chr1 (98-194)||(37649280-37649376)
chr1 (93-200)||(3302450-3302557)
chr1 (98-205)||(9474798-9474905)
chr1 (94-200)||(44332289-44332395)
chr1 (92-200)||(47748518-47748626)
chr1 (94-200)||(37926356-37926462)
chr1 (96-204)||(34339968-34340075)
chr1 (150-205)||(44548350-44548405)
chr1 (98-205)||(43203-43310)
chr1 (150-205)||(13414832-13414887)
chr1 (98-205)||(8346309-8346417)
chr1 (94-201)||(7740808-7740915)
chr1 (150-203)||(44454052-44454105)
[»] chr6 (19 HSPs)
chr6 (96-205)||(30870085-30870193)
chr6 (89-200)||(15507937-15508048)
chr6 (98-205)||(32869749-32869856)
chr6 (94-200)||(31110679-31110785)
chr6 (98-205)||(17598625-17598732)
chr6 (98-205)||(22880580-22880687)
chr6 (93-200)||(30341277-30341384)
chr6 (94-197)||(31976327-31976430)
chr6 (94-200)||(15989960-15990066)
chr6 (92-201)||(12732557-12732665)
chr6 (98-205)||(11427689-11427796)
chr6 (94-200)||(4231624-4231730)
chr6 (98-205)||(6209388-6209494)
chr6 (90-201)||(31952944-31953055)
chr6 (98-203)||(29857900-29858005)
chr6 (116-205)||(23128067-23128156)
chr6 (96-201)||(28536408-28536513)
chr6 (98-205)||(15832648-15832755)
chr6 (90-142)||(3213396-3213448)
[»] chr5 (27 HSPs)
chr5 (93-205)||(31009059-31009171)
chr5 (94-205)||(21370075-21370186)
chr5 (95-205)||(6679769-6679879)
chr5 (92-200)||(3921181-3921289)
chr5 (93-200)||(2252085-2252192)
chr5 (98-205)||(14831885-14831992)
chr5 (96-203)||(35943812-35943919)
chr5 (94-200)||(15409528-15409634)
chr5 (92-204)||(2177436-2177548)
chr5 (98-205)||(18520806-18520913)
chr5 (106-205)||(36732872-36732971)
chr5 (103-205)||(13811723-13811825)
chr5 (93-197)||(39688814-39688918)
chr5 (98-205)||(2740345-2740452)
chr5 (93-204)||(20073433-20073544)
chr5 (98-205)||(33149560-33149667)
chr5 (98-203)||(35785272-35785377)
chr5 (97-205)||(36875537-36875641)
chr5 (98-205)||(40145478-40145585)
chr5 (92-200)||(26720592-26720700)
chr5 (92-200)||(26990341-26990449)
chr5 (95-191)||(33825243-33825339)
chr5 (90-205)||(6259915-6260030)
chr5 (137-205)||(28177846-28177914)
chr5 (150-201)||(42414276-42414327)
chr5 (94-191)||(16327986-16328083)
chr5 (96-200)||(9603889-9603993)
[»] scaffold0316 (2 HSPs)
scaffold0316 (91-182)||(17197-17288)
scaffold0316 (131-205)||(17125-17194)
[»] chr7 (41 HSPs)
chr7 (94-205)||(12310975-12311086)
chr7 (98-205)||(8080305-8080412)
chr7 (98-205)||(19329913-19330020)
chr7 (98-205)||(38837288-38837395)
chr7 (96-200)||(7727982-7728086)
chr7 (98-205)||(32951415-32951522)
chr7 (94-205)||(41423753-41423864)
chr7 (91-200)||(35522952-35523061)
chr7 (93-197)||(21234480-21234584)
chr7 (96-200)||(41915817-41915921)
chr7 (98-205)||(11044249-11044356)
chr7 (93-200)||(31735953-31736060)
chr7 (94-200)||(26296720-26296826)
chr7 (91-200)||(8238289-8238398)
chr7 (96-204)||(18207251-18207359)
chr7 (92-204)||(27744225-27744337)
chr7 (94-194)||(46033719-46033819)
chr7 (98-205)||(38267111-38267218)
chr7 (94-200)||(22343437-22343543)
chr7 (94-200)||(38044273-38044379)
chr7 (96-190)||(45223128-45223222)
chr7 (148-205)||(36208244-36208301)
chr7 (98-205)||(4999436-4999543)
chr7 (98-205)||(7389460-7389566)
chr7 (98-205)||(40957778-40957885)
chr7 (95-205)||(16374743-16374853)
chr7 (96-204)||(39255844-39255952)
chr7 (114-205)||(3784066-3784157)
chr7 (94-201)||(35468773-35468880)
chr7 (150-205)||(35137604-35137659)
chr7 (103-205)||(19436114-19436216)
chr7 (93-159)||(46374741-46374807)
chr7 (97-190)||(1766702-1766795)
chr7 (95-140)||(2318160-2318205)
chr7 (91-200)||(32564341-32564450)
chr7 (91-200)||(40846028-40846137)
chr7 (152-201)||(3694442-3694491)
chr7 (98-162)||(3434666-3434730)
chr7 (143-186)||(10343530-10343573)
chr7 (95-180)||(32045933-32046018)
chr7 (94-126)||(36208304-36208336)
[»] scaffold1268 (1 HSPs)
scaffold1268 (95-205)||(848-958)
[»] scaffold1267 (1 HSPs)
scaffold1267 (95-205)||(848-958)
[»] scaffold0110 (1 HSPs)
scaffold0110 (92-205)||(8779-8892)
[»] scaffold0321 (1 HSPs)
scaffold0321 (98-205)||(10031-10138)
[»] scaffold0237 (1 HSPs)
scaffold0237 (98-203)||(4102-4207)
[»] scaffold0018 (1 HSPs)
scaffold0018 (95-200)||(152574-152679)


Alignment Details
Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 48375626 - 48375735
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  48375626 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 48375725  T
Q  196 gtccacgtga 205  Q
    ||||| ||||    
T  48375726 gtccatgtga 48375735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 26754880 - 26754766
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  26754880 aaaggaaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgt 26754781  T
Q  191 gcggggtccacgtga 205  Q
    |||||||||| ||||    
T  26754780 gcggggtccatgtga 26754766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 8076576 - 8076464
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||| ||||||  ||||||  ||||||||||| ||  ||||||||||||||||||||||||||| ||||| |||||||||||    
T  8076576 aggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 8076477  T
Q  193 ggggtccacgtga 205  Q
    |||||||||||||    
T  8076476 ggggtccacgtga 8076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 30801648 - 30801757
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||||||||| ||||||  |||||| | |||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||    
T  30801648 aaaggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgt 30801747  T
Q  191 gcggggtcca 200  Q
    | ||||||||    
T  30801748 gtggggtcca 30801757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 41189679 - 41189788
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||| | ||| | |||||||| |||||||||||| ||| ||||| |||||||||    
T  41189679 aaaggaaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgt 41189778  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  41189779 gcggggtcca 41189788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 53982189 - 53982082
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 53982090  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  53982089 ccacgtga 53982082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 26141444 - 26141561
Alignment:
Q  90 taaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagag--agaagaggagaggaaatagaaaatgtgct 187  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||| ||| | |||||||||  |||||||||||| ||| ||||| ||||||    
T  26141444 taaaggaaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtgct 26141543  T
Q  188 tgtgcggggtccacgtga 205  Q
    |||| |||||||| ||||    
T  26141544 tgtgtggggtccatgtga 26141561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 51419276 - 51419382
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||| ||||| |||||||||||||| | |||||||||| ||| | ||||||||||||| ||||||| ||| ||||| ||||||||||    
T  51419276 aaggaaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 51419375  T
Q  192 cggggtc 198  Q
    |||||||    
T  51419376 cggggtc 51419382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 33644378 - 33644271
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | || ||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 33644279  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  33644278 ccacgtga 33644271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 20764829 - 20764939
Alignment:
Q  90 taaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttg 189  Q
    ||||||||||||||||||||||||| ||||||  |||||| | |||||||||| ||| | ||||||||||||||| ||||| ||| ||||| ||||||||    
T  20764829 taaaggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttg 20764928  T
Q  190 tgcggggtcca 200  Q
    | |||||||||    
T  20764929 tacggggtcca 20764939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 54868817 - 54868922
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| |||||||||||||| | |||||||||||||  | ||||||||||||||| ||||| ||| ||||| |||| |||||||||||    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 54868916  T
Q  198 ccacgt 203  Q
    ||||||    
T  54868917 ccacgt 54868922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 11347840 - 11347946
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    |||||||| ||||||||||||||||||| ||||||| | || ||||||| ||| | ||||||||||||||||||||| ||| ||||| ||||||| |||     
T  11347840 ggaaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttatgca 11347939  T
Q  194 gggtcca 200  Q
    |||||||    
T  11347940 gggtcca 11347946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 24699870 - 24699982
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||||||| | ||||||  ||||||||||  ||||||  ||| ||||||||||||||||||||||||||| ||||| |||| ||||    
T  24699870 aaaggaaaatgttacatagacatcttttattctcatacatctta-tacacctcataaactaggaagagagaagaggagaggaaagagaaagtgtgtttgt 24699968  T
Q  191 gcggggtccacgtg 204  Q
     | |||||||||||    
T  24699969 acagggtccacgtg 24699982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 33118767 - 33118880
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaa-gaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||||| ||  |||||| |||||||| |||||||||||| ||||| |||| || ||    
T  33118767 aggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagtgtgtttctg 33118866  T
Q  192 cggggtccacgtga 205  Q
     ||| |||||||||    
T  33118867 agggatccacgtga 33118880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 45058469 - 45058577
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||||| |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| | | ||||||    
T  45058469 aaggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 45058568  T
Q  192 cggggtcca 200  Q
    |||||||||    
T  45058569 cggggtcca 45058577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 52629478 - 52629371
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||| ||||||||||||| | ||||||| || ||  | ||||||||||||||| ||||| ||| ||||| ||||||||| ||||||    
T  52629478 aatgatacatagacacccattatttccatacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 52629379  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  52629378 ccacgtga 52629371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 47532050 - 47531944
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||| |||||||||||| |||||||   |||||||  | ||| | ||||||||||||| ||||||| ||| ||||| |||||||||    
T  47532050 aaaggaaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 47531951  T
Q  191 gcggggt 197  Q
    |||||||    
T  47531950 gcggggt 47531944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 17470583 - 17470476
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| ||||||  ||||||| |||||||| || ||  | ||||||||||||||| ||||| ||| ||||| |||||||||| |||||    
T  17470583 aatgatacatagacaccatttattctcatacatatttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgtggggt 17470484  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  17470483 ccacgtga 17470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 31456867 - 31456764
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||| |||||||||||| |||| || | |||||||||| ||  | |||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  31456867 aatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 31456768  T
Q  198 ccac 201  Q
    ||||    
T  31456767 ccac 31456764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 36331247 - 36331353
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| ||| | |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| ||||||||    
T  36331247 ggaaaatgttacatatacatcttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 36331346  T
Q  194 gggtcca 200  Q
    |||||||    
T  36331347 gggtcca 36331353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 11907549 - 11907447
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacacccta---tatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||    | ||||       |||||||||||| ||| |||||||||||||||    
T  11907549 ggaaaatgttacatagacaccctttattttcatacatctttgtccaccctaatgcacacta-------agaagaggagagaaaagagaaaatgtgcttgt 11907457  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  11907456 gcggggtcca 11907447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 35536811 - 35536711
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||||||||| ||||||  |||||| | || ||||||| ||  |||||||||||||||||| ||| |||| || || |||||||||    
T  35536811 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgt 35536712  T
Q  191 g 191  Q
    |    
T  35536711 g 35536711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 14623757 - 14623864
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| ||||||  |||||||| || ||||||  ||  ||||| |||||||||||| ||| |||| ||||| |||||||||| |    
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtg 14623856  T
Q  194 gggtccac 201  Q
     |||||||    
T  14623857 aggtccac 14623864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 41080847 - 41080792
Alignment:
Q  136 tacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  41080847 tacaccctatgtactaggaagagagaagaggagatgaaagagaaaatgtgcttgtg 41080792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 49607592 - 49607485
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||   ||  | |||||||||| |||||||||| ||| ||||| |||||||||| ||| |    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggat 49607493  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  49607492 ccacgtga 49607485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 1758373 - 1758483
Alignment:
Q  90 taaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttg 189  Q
    ||||| ||||||||||||| ||||  ||||||  |||||| |||||||||||| ||  | |||||||||||||||||||| |||| |||||||||| |||    
T  1758373 taaagaaaaatgttacataaacactgtttatt--catacacctttgtacaccc-atgcattaggaagagagaagaggagatgaaagagaaaatgtgtttg 1758469  T
Q  190 tgcggggtccacgt 203  Q
    || || ||||||||    
T  1758470 tgtggagtccacgt 1758483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 13897970 - 13898080
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||| ||||||||| ||||||||| ||||||  ||||||  ||| ||||||| ||| |||||| ||||||||||| ||| |||| ||||| |||||||||    
T  13897970 aaagaaaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtgcttgt 13898069  T
Q  191 gcggggtccac 201  Q
    | | |||||||    
T  13898070 gtgaggtccac 13898080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 35965700 - 35965810
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| ||||||  |||||| | |||||||||  ||  | || ||| ||| |||||||||||||| ||||| |||||||||||     
T  35965700 ggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtgcttgtgca 35965799  T
Q  194 gggtccacgtg 204  Q
    || ||||||||    
T  35965800 ggatccacgtg 35965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 25395256 - 25395355
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    ||||||||||||||| | |||||   ||||||||||||||||||| || |||||| |||||| ||||| ||| |||| |||||||||| ||||| |||||    
T  25395256 aatgttacatagacatcttttatcctcatacatctttgtacaccc-atgtactagaaagagaaaagagaagatgaaagagaaaatgtgtttgtgtggggt 25395354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 42823295 - 42823187
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||||| |||| || |||||| | |||||||||  || || |||||||||||||||| | | |||| ||||| | | ||| ||    
T  42823295 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaataagaaagagaaagtatacttatg 42823196  T
Q  192 cggggtcca 200  Q
    |||||||||    
T  42823195 cggggtcca 42823187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 9563177 - 9563070
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||| |||||||||| ||||||| ||||||||| |  ||  | ||||||||||||||||||||| | | ||||| |||| |||||| || |    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcaggat 9563078  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  9563077 ccacgtga 9563070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 8956944 - 8956847
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||| | ||||||  |||||| | || |||||||| |  |||||||||||||||||| ||| |||| || || ||||||||||    
T  8956944 ggaaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtg 8956847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 21746106 - 21746202
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||||| |||||| |||| | ||||||| |||||| | |||||||||  ||||| | ||||||||||||| |||| |||| ||||| |||||||||    
T  21746106 ggaaaatattacatggacatcatttatttacatacacccttgtacacctcatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 21746202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 36707350 - 36707438
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgc 186  Q
    |||| |||||||||||| |||||| ||||||||  |||||||||  ||  | ||||||||||||||||||||| ||| ||||| |||||    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgc 36707438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 43746524 - 43746424
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||| ||||||||||||| ||||||||| ||  |||||| | |||||||||  ||  |||||||||| ||||||||||| |||| ||||| |||| ||||    
T  43746524 aaagaaaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactaggaagaaagaagaggagatgaaagagaaattgtgtttgt 43746425  T
Q  191 g 191  Q
    |    
T  43746424 g 43746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 24688509 - 24688451
Alignment:
Q  87 atctaaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctat 145  Q
    |||||||||||||||||||||  |||||||||||||| | ||  | |||||||||||||    
T  24688509 atctaaaggaaaatgttacatgaacaccctttatttctacactccattgtacaccctat 24688451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 25407065 - 25407171
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||| |||| |||||||||||   ||| || ||| |||||| |||| | |||  ||||||||||||||| |||| ||||| |||| ||||| |    
T  25407065 ggaaaatgttatatagtcaccctttattcttatatatatttatacaccttatacattagtgagagagaagaggagatgaaagagaaagtgtgtttgtgtg 25407164  T
Q  194 gggtcca 200  Q
    || ||||    
T  25407165 ggatcca 25407171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 3440163 - 3440052
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  3440163 aaggaaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtgcttgtg 3440064  T
Q  192 cggggtccacgt 203  Q
    ||||||||||||    
T  3440063 cggggtccacgt 3440052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 3738125 - 3738018
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  3738125 ggaaaatgttacatagacaccctatattttcatacacctttgtacaccctatattctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcg 3738026  T
Q  194 gggtccac 201  Q
    ||||||||    
T  3738025 gggtccac 3738018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 20700997 - 20700886
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||| ||  ||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcg 20700898  T
Q  194 gggtccacgtga 205  Q
    ||||||||||||    
T  20700897 gggtccacgtga 20700886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 13438521 - 13438414
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 13438422  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  13438421 ccacgtga 13438414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 26891422 - 26891533
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| |||||||| |||| ||||||  ||| |||||||| |||| |||||||||||||||| |||||||| ||||||||||||||| ||    
T  26891422 ggaaaatgttacatatacacccttaattttcatacacatttttacaccctgtatattaggaagagagaagagaagaggaaagagaaaatgtgcttgttcg 26891521  T
Q  194 gggtccacgtga 205  Q
     |||||||||||    
T  26891522 aggtccacgtga 26891533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 28381577 - 28381684
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||| ||| ||||| ||||||||||||| ||    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggagt 28381676  T
Q  198 ccacgtga 205  Q
    ||| ||||    
T  28381677 ccatgtga 28381684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 40613819 - 40613926
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||| ||| | || ||||| |||| ||||||| ||| ||||| |||||||||||    
T  40613819 aggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgc 40613918  T
Q  193 ggggtcca 200  Q
    ||||||||    
T  40613919 ggggtcca 40613926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 42257376 - 42257269
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||| |||||||||||||||||||||| |||||   |||||||||| ||| | |||||||| |||||||||||| ||| ||||| |||||||||||    
T  42257376 aggaaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgc 42257277  T
Q  193 ggggtcca 200  Q
    ||||||||    
T  42257276 ggggtcca 42257269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 10249304 - 10249411
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||  |||||| | |||||||||| ||  | |||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 10249403  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  10249404 ccacgtga 10249411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 17473198 - 17473091
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||  ||  | ||||||||||||||||||||| ||| ||||| |||||||||||||| |    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 17473099  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  17473098 ccacgtga 17473091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 17823971 - 17823864
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||| ||||||||| |||||| | |||||||||| ||||| | ||||||||||||| |||| |||| ||||| |||||||||      
T  17823971 aggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtat 17823872  T
Q  193 ggggtcca 200  Q
    ||||||||    
T  17823871 ggggtcca 17823864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 28863633 - 28863526
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||  ||  | ||||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 28863534  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  28863533 ccacgtga 28863526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 30915641 - 30915534
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||| || ||||||||||||| | |||||||||| || || ||||||||||||||| ||||| ||| ||||| ||||||||| ||||||    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 30915542  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  30915541 ccacgtga 30915534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 32505570 - 32505677
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||| |||||||  |||||| | |||||||||| ||  | || |||||||||||||||||| ||||||||| ||||||||||||||||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggt 32505669  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  32505670 ccacgtga 32505677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 43490303 - 43490197
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||| || |||||| | ||||||||||||| || |||||||||||||||| ||| |||| | ||| ||| ||||||||    
T  43490303 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcg 43490204  T
Q  194 gggtcca 200  Q
    |||||||    
T  43490203 gggtcca 43490197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 38732539 - 38732430
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||||||||| |||| || |||||||| ||||||| |  || || |||||||||||||||| ||| |||| ||||| ||| |||||    
T  38732539 aaaggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 38732440  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  38732439 gcggggtcca 38732430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 40701656 - 40701551
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| |||||||||||||| | |||||||||| ||  | ||||||||||||||| ||||| ||| ||||| |||| |||||||||||    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 40701557  T
Q  198 ccacgt 203  Q
    ||||||    
T  40701556 ccacgt 40701551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 13365536 - 13365429
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||| |||| || ||| || | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| |||||||    
T  13365536 aggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 13365437  T
Q  193 ggggtcca 200  Q
    ||||||||    
T  13365436 ggggtcca 13365429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 41758772 - 41758677
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgc 186  Q
    |||| ||||||||||||||||||  ||||||  |||||||| |||||||||| ||||| ||||||||||||||||||||  ||| |||||||||||    
T  41758772 aaagaaaaatgttacatagacacattttattctcatacatccttgtacaccccatatattaggaagagagaagaggagataaaagagaaaatgtgc 41758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 36169018 - 36168912
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| ||||||||||||  ||||||   |||||||||| ||| | ||||||||||||| ||||||| ||| ||||| | ||||||||||    
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcg 36168919  T
Q  194 gggtcca 200  Q
    |||||||    
T  36168918 gggtcca 36168912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 2533306 - 2533201
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||| ||| |||||||||||| ||||||| | |||||||||| ||| | | ||||||||||||||||||  ||| | ||| |||||||||||    
T  2533306 aggaaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgc 2533207  T
Q  193 ggggtc 198  Q
    ||||||    
T  2533206 ggggtc 2533201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 33436029 - 33436129
Alignment:
Q  105 catagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtg 204  Q
    |||||||||| ||||||  |||||| | |||||||||  ||  | ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  33436029 catagacaccttttattctcatacacccttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtg 33436128  T
Q  205 a 205  Q
    |    
T  33436129 a 33436129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 7465657 - 7465764
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||  ||  | ||||||||||||||| ||||  ||| ||||| |||||||||| |||||    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgtggggt 7465756  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  7465757 ccacgtga 7465764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 19930742 - 19930845
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| |||||| ||||||| | |||||||||  ||  | ||||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 19930841  T
Q  198 ccac 201  Q
    ||||    
T  19930842 ccac 19930845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 3034901 - 3035007
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||| || |||||| ||| |||||||  || || |||||||||||||||| ||| |||| ||||| | | ||||||||    
T  3034901 ggaaaatgttacatagacaccttttaattgcatacaccttggtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 3035000  T
Q  194 gggtcca 200  Q
    |||||||    
T  3035001 gggtcca 3035007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 38273061 - 38273166
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||| ||||||| ||||| ||||||  |||||||||| |||||||| ||| | ||||||||||||| ||||||| ||| ||||| |||||| |||||    
T  38273061 ggaaaatattacataaacaccatttattctcatacatctt-gtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctagtgcg 38273159  T
Q  194 gggtcca 200  Q
    |||||||    
T  38273160 gggtcca 38273166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 2997402 - 2997511
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||| |||||||||||||||||  |||| || |||||| | |||||||||  || || |||||||||||||||| ||| |||| ||||| ||| |||||    
T  2997402 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 2997501  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  2997502 gcggggtcca 2997511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 9058644 - 9058555
Alignment:
Q  112 accctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccac 201  Q
    |||||||||| |||||||   |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  9058644 accctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccac 9058555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 4060863 - 4060758
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||| ||| | |||||||||||||| | |||||||||| ||  | ||||||||||||||| ||||| ||| ||||| ||||||| |||||| |    
T  4060863 aatgatacataaacatcttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgcgggat 4060764  T
Q  198 ccacgt 203  Q
    ||||||    
T  4060763 ccacgt 4060758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 45097652 - 45097759
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||| ||| | |||| || ||||||   ||||||| || || || |||||||||||||||| ||| |||| ||||| ||| |||||||    
T  45097652 aggaaaatgttacataaacatcttttaattgcatacactcttgtacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 45097751  T
Q  193 ggggtcca 200  Q
    ||||||||    
T  45097752 ggggtcca 45097759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 17819978 - 17820031
Alignment:
Q  150 taggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgt 203  Q
    |||||||||||||||||||| |||| |||||||||| ||||| |||||||||||    
T  17819978 taggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgt 17820031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 33436339 - 33436295
Alignment:
Q  148 actaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||    
T  33436339 actaggaagagagaagaggataggaaagagaaagtgtgcttgtgc 33436295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 44152108 - 44152012
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    |||||||||||||| ||||| ||||||  |||||| | ||||| | |  ||  | |||||||||||||||||||| |||| ||||| ||||||||||    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgtatatctcatgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtg 44152012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 38882733 - 38882831
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgggg 196  Q
    |||| |||||||| ||| |||||| ||||||| | |||||||||| ||  | |||||||||| ||||  |||| ||| ||||| || ||||||||||||    
T  38882733 aatgatacatagagaccatttattcccatacacccttgtacaccccatgcattaggaagagataagataagagaaaagagaaagtgcgcttgtgcgggg 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 2329382 - 2329350
Alignment:
Q  152 ggaagagagaagaggagaggaaatagaaaatgt 184  Q
    ||||||||||||||||||||||| |||||||||    
T  2329382 ggaagagagaagaggagaggaaagagaaaatgt 2329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 12302358 - 12302302
Alignment:
Q  89 ctaaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctat 145  Q
    |||||||||||||||||||  |||||||||||||| | ||  | |||||||||||||    
T  12302358 ctaaaggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctat 12302302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 21301415 - 21301515
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||| ||||||||| ||| ||||||||||||||||||||    ||||||||  ||  |||||||||| ||||||| |||  ||| ||||| |||| ||||    
T  21301415 aaagaaaaatgttagatacacaccctttatttccatacactcatgtacacctcatgcactaggaagaaagaagagaagataaaagagaaagtgtgtttgt 21301514  T
Q  191 g 191  Q
    |    
T  21301515 g 21301515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 15258845 - 15258958
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  15258845 aaggaaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 15258944  T
Q  192 cggggtccacgtga 205  Q
    | ||||||||||||    
T  15258945 cagggtccacgtga 15258958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 37038661 - 37038550
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| |||||||||||||| ||||| | |||||||||| ||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 37038562  T
Q  194 gggtccacgtga 205  Q
    || |||||||||    
T  37038561 ggatccacgtga 37038550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 43414498 - 43414610
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||| ||| | ||||||||||||||||||||| ||| ||||| |||||||||||    
T  43414498 aggaaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 43414597  T
Q  193 ggggtccacgtga 205  Q
    ||| |||| ||||    
T  43414598 gggatccatgtga 43414610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 14548100 - 14547993
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 14548001  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  14548000 ccacgtga 14547993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 8841350 - 8841461
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| ||||||  ||||||   |||||||||| ||  |||||||| |||||||||||||||||| ||||| ||||||||||||    
T  8841350 ggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtgcttgtgcg 8841449  T
Q  194 gggtccacgtga 205  Q
    ||||||||||||    
T  8841450 gggtccacgtga 8841461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 40467882 - 40467772
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||||  ||||| || ||||||||||| ||| ||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  40467882 ggaaaatgttacatagacaccttttatccccataaatttttgtacaccccatagactaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcg 40467783  T
Q  194 gggtccacgtg 204  Q
      |||||||||    
T  40467782 aagtccacgtg 40467772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 10284549 - 10284660
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| ||||||   ||||| | |||||||||| ||  ||||||||||||||||| || |||||| ||||| ||||||||||||    
T  10284549 ggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgtgcg 10284648  T
Q  194 gggtccacgtga 205  Q
    ||||||||||||    
T  10284649 gggtccacgtga 10284660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 5958011 - 5957901
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    |||||||||||||| ||||||||||||  |||||| | |||||||||  ||  ||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcgg 5957912  T
Q  195 ggtccacgtga 205  Q
    | |||||||||    
T  5957911 gatccacgtga 5957901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 40423864 - 40423968
Alignment:
Q  97 aaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgggg 196  Q
    ||||| |||||||||||| |||||| ||||||| | |||||||||  || || ||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 40423963  T
Q  197 tccac 201  Q
    |||||    
T  40423964 tccac 40423968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 12831225 - 12831118
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| ||||||  |||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 12831126  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  12831125 ccacgtga 12831118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 504043 - 504150
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||  |||||| | |||||||||| ||  | ||||||||||||||| ||||| ||| ||||  ||||||||||||||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggt 504142  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  504143 ccacgtga 504150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 16056322 - 16056425
Alignment:
Q  97 aaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgggg 196  Q
    |||||||||||||||||| |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| |||||||||||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  197 tcca 200  Q
    ||||    
T  16056422 tcca 16056425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 23122519 - 23122626
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||  |||||| | |||||||||| ||  | ||||||||||||| ||||||| ||| ||||| ||||||| ||||||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggt 23122618  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  23122619 ccacgtga 23122626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 34012218 - 34012325
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||  | |||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| |||||||||||||| |    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 34012317  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  34012318 ccacgtga 34012325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 34307394 - 34307295
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    ||||||||||||||||| |||| || |||||| | |||||||||| ||||| |||||||||||||||| ||| |||| ||||| ||| ||||||||||||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 34307295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 42221698 - 42221591
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||| ||| ||| ||||||||| |||||| | |||||||||||||||| | ||||||||||||| |||| |||| ||||| |||||||||      
T  42221698 aggaaaatgttatataaacatcctttatttacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtat 42221599  T
Q  193 ggggtcca 200  Q
    ||||||||    
T  42221598 ggggtcca 42221591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 24307715 - 24307817
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    ||||||||||||||||| |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| ||||||||||||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 24307814  T
Q  198 cca 200  Q
    |||    
T  24307815 cca 24307817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 32707921 - 32708029
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtg--cttgtg 191  Q
    ||||||||||||||||||||| |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||||  ||||||    
T  32707921 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtgtacttgtg 32708020  T
Q  192 cggggtcca 200  Q
    |||||||||    
T  32708021 cggggtcca 32708029  T

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Target: chr8; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 15048098 - 15048206
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggaga-ggaaatagaaaatgtgcttgtg 191  Q
    |||||||||||| |||||||||||||||| | ||||| | ||||||| || ||| | ||||||||||||||||||||   ||| ||||| ||||||||||    
T  15048098 aggaaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtg 15048197  T
Q  192 cggggtcca 200  Q
    |||||||||    
T  15048198 cggggtcca 15048206  T

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Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 9122363 - 9122256
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||  ||||||| |||||||   |||||||||| ||  | ||||||||||||||||||||| ||| ||||| |||||||||||||| |    
T  9122363 aatgatacatagacattctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 9122264  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  9122263 ccacgtga 9122256  T

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Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 4854781 - 4854887
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    |||||||||||||||||||| |||||||  |||| | | ||||||| || ||| | ||| ||||||||||||||||| ||| ||||| |||||||||||     
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgca 4854880  T
Q  194 gggtcca 200  Q
    |||||||    
T  4854881 gggtcca 4854887  T

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Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 25838370 - 25838260
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    |||||||||||||||| | |||||||| ||||||| | |||||||||||||| | ||| || |||||||||||||| ||| | ||| ||||||||| |||    
T  25838370 gaaaatgttacatagatatcctttattgccatacaaccttgtacaccctatacattagcaaaagagaagaggagagaaaagaaaaagtgtgcttgtacgg 25838271  T
Q  195 ggtccacgtga 205  Q
     ||||| ||||    
T  25838270 agtccatgtga 25838260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 42354503 - 42354600
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgctt 188  Q
    |||||||||||||||||||||||| ||||||  |||||| | || ||||||| ||  |||||||||||||||||| ||| |||| ||||| |||||||    
T  42354503 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgctt 42354600  T

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Target: chr8; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 1179870 - 1179958
Alignment:
Q  106 atagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    ||||||| |||||||| ||||| ||| |||||||||| ||  | ||||||||||||||||||||| ||| ||||| |||||||||||||    
T  1179870 atagacatcctttattcccatatatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgg 1179958  T

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Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 15197511 - 15197404
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||  |||||| ||||||| | |||||||||  ||  | | |||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  15197511 aatgatacatagacactttttattcccatacacccttgtacacctcatgcatttggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 15197412  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  15197411 ccacgtga 15197404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 30479396 - 30479498
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    ||||||||||||||||| |||| || |||||| | |||||||||  || || |||||||||||||||| ||| |||| ||||| ||| |||||||| |||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgaggt 30479495  T
Q  198 cca 200  Q
    |||    
T  30479496 cca 30479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 42710216 - 42710298
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaa 180  Q
    |||| |||| |||||||||||||| ||||||| | |||||||||| ||| | ||||||||||||||||||||| ||| |||||    
T  42710216 aatgatacacagacaccctttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaa 42710298  T

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Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 20074914 - 20074970
Alignment:
Q  148 actaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtg 204  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||    
T  20074914 actaggaagagagaagagaagaggaaagagaaagtgtgcttgtgcagggtccacgtg 20074970  T

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Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 32032906 - 32032808
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    ||||||||||||||||||||| |||| || |||||| | |||||||||  || || |||||||||||||||| ||  |||| ||||| ||| |||||||    
T  32032906 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaaggagaaagagaaagtgtacttgtgc 32032808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 10621055 - 10621106
Alignment:
Q  144 atatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  10621055 atatattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggg 10621106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 16383520 - 16383453
Alignment:
Q  133 ttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtcca 200  Q
    |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| |||||||||||||||    
T  16383520 ttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtcca 16383453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 17444005 - 17443900
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    |||||||||||||||||||||||||    ||||||| ||||||| |  ||  ||| |||||||||||||| ||| |||| ||||| |||  ||||| |||    
T  17444005 aaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactgggaagagagaagagaagatgaaagagaaagtgtctttgtgtggg 17443906  T
Q  196 gtccac 201  Q
    ||||||    
T  17443905 gtccac 17443900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 44507035 - 44507116
Alignment:
Q  124 catacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    |||||| | |||||||||| ||  | ||||||||||||||| ||||| ||| ||||| | ||||||| ||||||||||||||    
T  44507035 catacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtga 44507116  T

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Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 30183792 - 30183864
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaaga 164  Q
    ||||||||||||| ||||||| ||||||||| ||||||   |||||||||| ||||| | |||||| ||||||    
T  30183792 aaggaaaatgttagatagacatcctttatttacatacactcttgtacaccccatatatttggaagaaagaaga 30183864  T

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Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 50052345 - 50052457
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||  ||||||||||||||||||||||||||| ||||| |||||||||||    
T  50052345 aggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 50052444  T
Q  193 ggggtccacgtga 205  Q
    |||||||||||||    
T  50052445 ggggtccacgtga 50052457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 29240072 - 29239957
Alignment:
Q  90 taaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttg 189  Q
    |||||||||||||||||||||||||||||||| |||||||   |||||||||| ||  ||||||||||||||||||||||||||| ||||| ||||||||    
T  29240072 taaaggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttg 29239973  T
Q  190 tgcggggtccacgtga 205  Q
    || |||||||||||||    
T  29239972 tgtggggtccacgtga 29239957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 50526088 - 50526200
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||| |||||||||||||| ||||| | |||||||||| ||  |||||||||||||||||||||||||||||||||  ||||||||||    
T  50526088 aggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgc 50526187  T
Q  193 ggggtccacgtga 205  Q
    ||  |||||||||    
T  50526188 ggaatccacgtga 50526200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 48647645 - 48647755
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    |||||||||||||||||| | |||||||  |||||||||||||||  ||||  ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  48647645 gaaaatgttacatagacatcatttatttttatacatctttgtacattctatgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgcgg 48647744  T
Q  195 ggtccacgtga 205  Q
     ||||||||||    
T  48647745 agtccacgtga 48647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 24995029 - 24995136
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| ||  | || |||||||||||||||||| ||| ||||||||||||||||||||||    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggt 24995128  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  24995129 ccacgtga 24995136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 41236525 - 41236418
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 41236426  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  41236425 ccacgtga 41236418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 42044289 - 42044396
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||||||||||| | ||||||| || ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  42044289 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 42044388  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  42044389 ccacgtga 42044396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 19670631 - 19670740
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||||||||| |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| |||||    
T  19670631 aaaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 19670730  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  19670731 gcggggtcca 19670740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 31910376 - 31910268
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||||| |||||| |||||||   ||||||| || ||| | ||||||||||||||| ||||| ||| ||||| ||||||||||    
T  31910376 aaggaaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtg 31910277  T
Q  192 cggggtcca 200  Q
    |||||||||    
T  31910276 cggggtcca 31910268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 41824064 - 41823953
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| ||||||  |||||| |||||||||||  ||  | ||||||||||||||| ||||| ||| ||||| ||||||||||||    
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 41823965  T
Q  194 gggtccacgtga 205  Q
    ||||||| ||||    
T  41823964 gggtccatgtga 41823953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 48182971 - 48183078
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||  |||||| | |||||||||| ||  | || |||||||||||||||||| ||| ||||| ||||||||||||||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 48183070  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  48183071 ccacgtga 48183078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 480382 - 480476
Alignment:
Q  111 caccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    ||||| ||||||||||||| |||||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||    
T  480382 cacccattatttccatacacctttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtga 480476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 40574959 - 40574855
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||||||| ||||||||| ||||||  |||||| | |||||||||| ||||| ||||||||||||||||||||| ||| ||||| ||||||||| ||||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgttcggg 40574860  T
Q  196 gtcca 200  Q
     ||||    
T  40574859 atcca 40574855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 6034222 - 6034115
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| ||||||  |||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| |||||||||||||| |    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 6034123  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  6034122 ccacgtga 6034115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 54473467 - 54473562
Alignment:
Q  110 acaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    |||||||||||| ||||||| | |||||||| | || || ||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  54473467 acaccctttattcccatacacccttgtacactccatgtattaggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtga 54473562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 47986393 - 47986284
Alignment:
Q  90 taaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttg 189  Q
    ||||||||||||||||||||||||| |||| || |||||| | ||||||| || || || |||||||||||||||| | | |||| ||||| ||| ||||    
T  47986393 taaaggaaaatgttacatagacacc-tttaattgcatacacccttgtacatcccatgtattaggaagagagaagagaataagaaagagaaagtgtacttg 47986295  T
Q  190 tgcggggtcca 200  Q
    |||||||||||    
T  47986294 tgcggggtcca 47986284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 55475373 - 55475267
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| ||| |||     
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgca 55475274  T
Q  194 gggtcca 200  Q
    |||||||    
T  55475273 gggtcca 55475267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 17983658 - 17983767
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||| |||||||||||||||||  |||| || |||||| | |||||||||  || || |||||||||||||||| ||| |||| ||||| ||| |||||    
T  17983658 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 17983757  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  17983758 gcggggtcca 17983767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 28480184 - 28480293
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    |||||||||||||||||||||||||||||    ||||||| ||||||| |  ||  |||||||||||||||||||||| |||  ||||| |||| |||||    
T  28480184 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28480283  T
Q  192 cggggtccac 201  Q
     |||||||||    
T  28480284 tggggtccac 28480293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 28481059 - 28481168
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    |||||||||||||||||||||||||||||    ||||||| ||||||| |  ||  |||||||||||||||||||||| |||  ||||| |||| |||||    
T  28481059 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28481158  T
Q  192 cggggtccac 201  Q
     |||||||||    
T  28481159 tggggtccac 28481168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 28481934 - 28482043
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    |||||||||||||||||||||||||||||    ||||||| ||||||| |  ||  |||||||||||||||||||||| |||  ||||| |||| |||||    
T  28481934 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28482033  T
Q  192 cggggtccac 201  Q
     |||||||||    
T  28482034 tggggtccac 28482043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 44536663 - 44536768
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||  |||| || |||||||  ||||||||||||| || |||||||||||||||| ||| |||| ||||| ||| ||| ||     
T  44536663 aggaaaatgttacatagacacattttaattgcatacattcttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgt 44536762  T
Q  193 ggggtc 198  Q
    ||||||    
T  44536763 ggggtc 44536768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 11511385 - 11511491
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||  |||||||||||||| | |||||||||  ||  | || ||||||||||||| |||| ||| ||||| ||||||||||||||||    
T  11511385 aatgatacatagacaca-tttatttccatacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggt 11511483  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  11511484 ccacgtga 11511491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 18924410 - 18924513
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||||||||| |||| || |||||| | || ||||||  || || |||||||||||||||| ||| |||| ||||| ||| |||||    
T  18924410 aaaggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 18924509  T
Q  191 gcgg 194  Q
    ||||    
T  18924510 gcgg 18924513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 29234219 - 29234274
Alignment:
Q  150 taggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  29234219 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtga 29234274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 29547876 - 29547983
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||| |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| | ||| ||| ||| |||    
T  29547876 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgtacttatgc 29547975  T
Q  193 ggggtcca 200  Q
    ||| ||||    
T  29547976 gggatcca 29547983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 50813810 - 50813913
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||| || |||||| | ||||||| |  || || |||||||||||||||| ||| |||| ||||| ||| ||||||||    
T  50813810 ggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50813909  T
Q  194 gggt 197  Q
    ||||    
T  50813910 gggt 50813913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 53352496 - 53352591
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||| |||||| | |||||||||        ||||||||||||||||||||| ||| ||||| | ||||||||||||||    
T  53352496 aatgatacatagacaccctttattttcatacacccttgtacacc--------taggaagagagaagaggagagaaaagagaaagtatgcttgtgcggggt 53352587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 29589655 - 29589764
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||| ||||||||||||| |||| || ||||||   |||||||||  || || |||||||||||||||| ||| |||| ||||| ||| |||||    
T  29589655 aaaggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 29589754  T
Q  191 gcggggtcca 200  Q
    | ||||||||    
T  29589755 gtggggtcca 29589764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 23608413 - 23608306
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||| |||||||| |||||||||  ||||||||  ||  | ||||||||||||||||||||  ||| ||||| |||||||||| || ||    
T  23608413 aatgatacatagacatcctttattcccatacatccctgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgtggagt 23608314  T
Q  198 ccacgtga 205  Q
     |||||||    
T  23608313 tcacgtga 23608306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 32767141 - 32767034
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||  |||| || |||||| | |||||||| |||| || ||| |||||||| ||| ||| |||| ||||| ||| |||||||    
T  32767141 aggaaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattagaaagagagaggagaagaagaaagagaaagtgtacttgtgc 32767042  T
Q  193 ggggtcca 200  Q
     |||||||    
T  32767041 agggtcca 32767034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 3481828 - 3481725
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||||||||||||  ||||||          ||||||  ||||| ||||||||||| | ||||||| ||||| ||||||||||    
T  3481828 aaggaaaatgttacatagacaccctttattctcataca----------ccctatgcactagaaagagagaagatgggaggaaagagaaagtgtgcttgtg 3481739  T
Q  192 cggggtccacgtga 205  Q
     |||||||||||||    
T  3481738 tggggtccacgtga 3481725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 30037039 - 30036994
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacacc 141  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||    
T  30037039 aaaatattacatagacaccctttattttcatacatccttgtacacc 30036994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 32939588 - 32939625
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccataca 129  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  32939588 aaggaaaatgttacatagacaccctttatttccgtaca 32939625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 29978065 - 29977961
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||||||||||||| | | |||||| | |||||   |||||||||| ||| | |||  ||||| ||||| ||| |||| ||||| |||||||||| |||    
T  29978065 aaaatgttacatagatatcttttattcctatacacacttgtacaccccatacattagtgagagaaaagagaagatgaaagagaaagtgtgcttgtgtggg 29977966  T
Q  196 gtcca 200  Q
    |||||    
T  29977965 gtcca 29977961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 4e-40; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 6261052 - 6260941
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||    
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatagaaaatgtgcttatgcg 6260953  T
Q  194 gggtccacgtga 205  Q
    ||||||||||||    
T  6260952 gggtccacgtga 6260941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 51898601 - 51898712
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| |||||||||||||| ||||| | |||||||||| ||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 51898700  T
Q  194 gggtccacgtga 205  Q
    || |||||||||    
T  51898701 ggatccacgtga 51898712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 32813429 - 32813318
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||||| ||||||| | |||||||||| ||| | ||||||||||||||||||||| ||| ||||| ||||||||||||    
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 32813330  T
Q  194 gggtccacgtga 205  Q
    ||||||| ||||    
T  32813329 gggtccatgtga 32813318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 27564657 - 27564764
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 27564756  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  27564757 ccacgtga 27564764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 3000497 - 3000390
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||| || ||||||||||||| | |||||||||| ||||| ||||||||||||||| ||||| ||| ||||| ||||||||| ||||||    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 3000398  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  3000397 ccacgtga 3000390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 38595332 - 38595225
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||| || ||||||||||||| | |||||||||| ||||| ||||||||||||||| ||||| ||| ||||| ||||||||| ||||||    
T  38595332 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 38595233  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  38595232 ccacgtga 38595225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 47452242 - 47452349
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||| ||||||| ||||||||| |||||||||| ||  | ||||||||||||||||||||| ||| ||||| |||||||||||||| |    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 47452341  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  47452342 ccacgtga 47452349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 48489440 - 48489371
Alignment:
Q  136 tacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  48489440 tacaccctatatactaggaagagagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtga 48489371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 50630629 - 50630529
Alignment:
Q  105 catagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtg 204  Q
    |||||||||| ||||||  |||||| | |||||||||||||  | ||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  50630629 catagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtg 50630530  T
Q  205 a 205  Q
    |    
T  50630529 a 50630529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 11152293 - 11152400
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||| ||||||||| ||||||  |||||||| || ||||||| ||  ||| ||||||||||||||||||||||| |||||  ||||||||    
T  11152293 aaaggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgt 11152392  T
Q  191 gcggggtc 198  Q
    ||||||||    
T  11152393 gcggggtc 11152400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 48716204 - 48716311
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| ||  | |||||||||||||||||| || ||| | ||| ||||||||||||||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 48716303  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  48716304 ccacgtga 48716311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 38632253 - 38632350
Alignment:
Q  108 agacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    |||||||||||||| ||||||| | |||||||||| ||  | ||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  38632253 agacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtga 38632350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 45044475 - 45044584
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||||||||||||| |||||| | ||||||  |||||| | |||||||||| ||| | |||||||||||||||| |||| ||| |||||||||| ||||    
T  45044475 aaaggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaaatgtgtttgt 45044574  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  45044575 gcggggtcca 45044584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 5958916 - 5959024
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||||  |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  5958916 aaggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 5959015  T
Q  192 cggggtcca 200  Q
    |||||||||    
T  5959016 cggggtcca 5959024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 2582093 - 2581986
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||| ||||||||||||   ||||| | |||||||||  || || ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  2582093 aatgatacataaacaccctttattctaatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggt 2581994  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  2581993 ccacgtga 2581986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 41758983 - 41758876
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||  |||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 41758884  T
Q  198 ccacgtga 205  Q
    ||| ||||    
T  41758883 ccatgtga 41758876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 41608411 - 41608517
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| ||||| |||| || |||||| | ||||||||||||| || |||||||||||||||| ||| |||| ||||| ||| ||||| ||    
T  41608411 ggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacg 41608510  T
Q  194 gggtcca 200  Q
    |||||||    
T  41608511 gggtcca 41608517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 49811447 - 49811545
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    ||||||||||||||||||||||||||  |||||| | |||| ||||  ||| | ||||||||||||||||||||| ||| ||||| |||||||||||||    
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgg 49811545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 50590918 - 50591024
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||| ||| |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| ||||||||    
T  50590918 ggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50591017  T
Q  194 gggtcca 200  Q
    |||||||    
T  50591018 gggtcca 50591024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 37649376 - 37649280
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| ||  | ||||||||||||||||||||| |||  |||| |||||||||||||    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcgg 37649280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 3302450 - 3302557
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||| ||| ||| ||||||||  |||||| | |||||||||||||||| | ||||||||||||| |||| |||| ||||| |||||||||      
T  3302450 aggaaaatgttatataaacatcctttattaacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtgcttgtat 3302549  T
Q  193 ggggtcca 200  Q
    ||||||||    
T  3302550 ggggtcca 3302557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 9474798 - 9474905
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||| |||||||  |||||| | ||||||| || ||  | ||||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 9474897  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  9474898 ccacgtga 9474905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 44332289 - 44332395
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||| ||| |||| || |||||| | |||||||| |||| || |||||||||||||||| ||| |||| ||||| | | ||||||||    
T  44332289 ggaaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 44332388  T
Q  194 gggtcca 200  Q
    |||||||    
T  44332389 gggtcca 44332395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 47748626 - 47748518
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||||| |||| || ||||||   |||||||||| || || |||||||||||||||| ||| |||| ||||| | | ||||||    
T  47748626 aaggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 47748527  T
Q  192 cggggtcca 200  Q
    |||| ||||    
T  47748526 cgggatcca 47748518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 37926356 - 37926462
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||| ||| ||||||||| ||||||  |||||||| |||||||||| ||| | |||||||||||||||| |||| ||| ||||| ||| ||||| ||    
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtacttgtacg 37926455  T
Q  194 gggtcca 200  Q
    || ||||    
T  37926456 ggatcca 37926462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 34339968 - 34340075
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||||||||||||||||| ||||||| || |||   |||||||||||||  ||| |||||||||||||| |||| ||| ||||| ||||||| | || |    
T  34339968 aaaatgttacatagacaccttttattttca-acactcttgtacaccctatgcacttggaagagagaagagaagagaaaaaagaaactgtgcttatacgag 34340066  T
Q  196 gtccacgtg 204  Q
    |||||||||    
T  34340067 gtccacgtg 34340075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 44548350 - 44548405
Alignment:
Q  150 taggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    ||||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||    
T  44548350 taggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtga 44548405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 43310 - 43203
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||| ||||||||||   |||||   |||||||||| ||  | ||| |||||||| |||||||| ||| ||||| ||||||||||||| ||    
T  43310 aatgatacatagataccctttattcttatacactcttgtacaccccatgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgcggagt 43211  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  43210 ccacgtga 43203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 13414887 - 13414832
Alignment:
Q  150 taggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    ||||||||||||||| || || ||| |||||||||||||||| |||||||||||||    
T  13414887 taggaagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtga 13414832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 8346309 - 8346417
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaa-gaggagaggaaatagaaaatgtgcttgtgcgggg 196  Q
    |||| |||||| | ||| ||||||  |||||| |||||||||| | ||  | |||||||||| || |||||||| ||| ||||| ||||||||||| |||    
T  8346309 aatgatacataaataccatttattctcatacacctttgtacactccatgcattaggaagagaaaaagaggagagaaaagagaaagtgtgcttgtgcaggg 8346408  T
Q  197 tccacgtga 205  Q
    |||||||||    
T  8346409 tccacgtga 8346417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 7740915 - 7740808
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    |||| |||| |||| || ||||||||||  | |||||||||||||| || ||  |  ||||||||||||||||||| |||| ||||||| |  ||||| |    
T  7740915 ggaagatgtcacatggataccctttattctcgtacatctttgtacatcccatgcaacaggaagagagaagaggagatgaaaaagaaaatatatttgtgtg 7740816  T
Q  194 gggtccac 201  Q
    ||||||||    
T  7740815 gggtccac 7740808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 44454105 - 44454052
Alignment:
Q  150 taggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgt 203  Q
    ||||||||||||||| ||||||||| | ||| |||||||||| ||| |||||||    
T  44454105 taggaagagagaagatgagaggaaagaaaaagtgtgcttgtgtgggatccacgt 44454052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 6e-39; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 30870193 - 30870085
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  30870193 aaaatgtta-atagacaccctttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 30870095  T
Q  196 gtccacgtga 205  Q
    ||||| ||||    
T  30870094 gtccatgtga 30870085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 15507937 - 15508048
Alignment:
Q  89 ctaaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgctt 188  Q
    |||||||||||||||||||||||||| |||| || |||||||| |||||||||| ||||| |||||||||||||||| ||| |||| ||||| ||| |||    
T  15507937 ctaaaggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtactt 15508036  T
Q  189 gtgcggggtcca 200  Q
    ||||||||||||    
T  15508037 gtgcggggtcca 15508048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 32869856 - 32869749
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32869757  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  32869756 ccacgtga 32869749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 31110679 - 31110785
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| ||| | |||||||||||||||| |||| ||| ||||| |||||||||||     
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgca 31110778  T
Q  194 gggtcca 200  Q
    |||||||    
T  31110779 gggtcca 31110785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 17598732 - 17598625
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| |||||||||||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 17598633  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  17598632 ccacgtga 17598625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 22880580 - 22880687
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||| ||||| |||||| ||||||| | |||||||||| || || ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  22880580 aatgatacatatacaccatttattcccatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 22880679  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  22880680 ccacgtga 22880687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 30341277 - 30341384
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||| |||| || |||||| | |||||||||| ||||| |||||||||||||||| ||| |||| ||||| ||| |||||||    
T  30341277 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 30341376  T
Q  193 ggggtcca 200  Q
    ||||||||    
T  30341377 ggggtcca 30341384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 31976430 - 31976327
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| ||||||  |||||| | |||||||||| ||| | ||||||||||||||||||||| ||| ||||| ||||||||||||    
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31976331  T
Q  194 gggt 197  Q
    ||||    
T  31976330 gggt 31976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 15989960 - 15990066
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||| || |||||| | |||||||||| ||||| |||||||||||||||| ||| |||| ||||| ||| ||||||||    
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15990059  T
Q  194 gggtcca 200  Q
    |||||||    
T  15990060 gggtcca 15990066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 92 - 201
Target Start/End: Complemental strand, 12732665 - 12732557
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||| |||| ||| |||||| |||||||||||||||| |||| ||||||||||||| ||    
T  12732665 aaggaaaatgttacatagacatc-tttatttccatacatttttgtgcaccttatgtactagaaagagagaagaggagatgaaagagaaaatgtgcttatg 12732567  T
Q  192 cggggtccac 201  Q
     ||| |||||    
T  12732566 tgggatccac 12732557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 11427796 - 11427689
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||  |||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| |||||||||||||| |    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 11427697  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  11427696 ccacgtga 11427689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 4231730 - 4231624
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| ||||||||    
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 4231631  T
Q  194 gggtcca 200  Q
    |||||||    
T  4231630 gggtcca 4231624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 6209388 - 6209494
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||| |||||||||| || |||||||||||||| || ||  | ||||||||||||||||||||| ||| ||||| |||||| |||||||||    
T  6209388 aatgatacatagataccctttattccc-tacatctttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggt 6209486  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  6209487 ccacgtga 6209494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 31952944 - 31953055
Alignment:
Q  90 taaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttg 189  Q
    ||||||||||||||||||||||||| ||||||  |||||||| || ||||||| ||  |||||||||||||||||| ||| |||| ||||| |||| |||    
T  31952944 taaaggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttg 31953043  T
Q  190 tgcggggtccac 201  Q
    || | |||||||    
T  31953044 tgtgaggtccac 31953055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 29858005 - 29857900
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| |||||| ||||||| | |||||||||| ||  | |||||||||||||||| |||| ||| ||||| ||||||| |||||| |    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 29857906  T
Q  198 ccacgt 203  Q
    ||||||    
T  29857905 ccacgt 29857900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 23128067 - 23128156
Alignment:
Q  116 tttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    |||||||||||||| | ||||||| || ||  | |||||||||| |||||||||| ||| ||||| |||||||||| ||| |||||||||    
T  23128067 tttatttccatacacccttgtacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtga 23128156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 28536408 - 28536513
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    |||||||||||| |||| | ||||||| |||||| | |||||||||| ||  | ||||||||| |||||| |||  ||| ||||| |||||||||| |||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggg 28536507  T
Q  196 gtccac 201  Q
    ||||||    
T  28536508 gtccac 28536513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 15832755 - 15832648
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||| ||||||||||||||| | ||||| | |||||||||| ||  | |||||||| |||||||||||  ||| |||||||||  |||||| || |    
T  15832755 aatgatacgtagacaccctttattccaatacacccttgtacaccccatgcattaggaagatagaagaggagaaaaaagagaaaatgtatttgtgcaggat 15832656  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  15832655 ccacgtga 15832648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 3213396 - 3213448
Alignment:
Q  90 taaaggaaaatgttacatagacaccctttatttccatacatct--ttgtacaccc 142  Q
    ||||||||||||||||||| ||||||||||||  |||||||||  ||||||||||    
T  3213396 taaaggaaaatgttacataaacaccctttatt--catacatctcattgtacaccc 3213448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 6e-36; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 31009171 - 31009059
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||| ||  |||||||||||||||||| |||||||||||||| |||||||||||    
T  31009171 aggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgc 31009072  T
Q  193 ggggtccacgtga 205  Q
    ||| |||||||||    
T  31009071 gggatccacgtga 31009059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 21370186 - 21370075
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||| | ||||||||||||||| |||||| ||||||||| |||||||||| |||||||    
T  21370186 ggaaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcg 21370087  T
Q  194 gggtccacgtga 205  Q
    ||||||||||||    
T  21370086 gggtccacgtga 21370075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 6679879 - 6679769
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    |||||||||||||||||| | ||||||  |||||| | |||||||||||||| | ||||||||||||||||||||| ||| |||||||||| ||||||||    
T  6679879 gaaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcgg 6679780  T
Q  195 ggtccacgtga 205  Q
    |||||| ||||    
T  6679779 ggtccatgtga 6679769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 3921181 - 3921289
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||||| |||| || |||||| | |||||||||| ||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  3921181 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 3921280  T
Q  192 cggggtcca 200  Q
    |||||||||    
T  3921281 cggggtcca 3921289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 2252085 - 2252192
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||| |||| || |||||| | |||||||||| ||||| |||||||||||||||| ||| |||| ||||| ||| |||||||    
T  2252085 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 2252184  T
Q  193 ggggtcca 200  Q
    ||||||||    
T  2252185 ggggtcca 2252192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 14831992 - 14831885
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||| ||  | ||||||||||||||||||||  ||| ||||| |||||||||||||| |    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggat 14831893  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  14831892 ccacgtga 14831885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 35943812 - 35943919
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||||||||||||||||  |||||||||||||| | |||||||||| ||  |||||||||||| |||||||||||||| ||||| |||||||||| |||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtggg 35943911  T
Q  196 gtccacgt 203  Q
     |||||||    
T  35943912 atccacgt 35943919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 15409528 - 15409634
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| ||||||||||||  |||||| | |||||||||| ||| | ||||||||||||||||||||| ||| ||| | ||||||||||||    
T  15409528 ggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgcg 15409627  T
Q  194 gggtcca 200  Q
    |||||||    
T  15409628 gggtcca 15409634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 2177548 - 2177436
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||| ||||||  ||||||  |||||| | ||||||| || ||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  2177548 aaggaaaatgttacagagacacattttattctcatacacccttgtacatccaatgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 2177449  T
Q  192 cggggtccacgtg 204  Q
     ||| ||||||||    
T  2177448 tgggatccacgtg 2177436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 18520806 - 18520913
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||| |||||| | |||||||||  ||  | ||||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 18520905  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  18520906 ccacgtga 18520913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 36732872 - 36732971
Alignment:
Q  106 atagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    |||||||||||||||| ||||||| | |||||||||  ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  36732872 atagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtga 36732971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 13811825 - 13811723
Alignment:
Q  103 tacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacg 202  Q
    |||||||||||| |||||| ||||||||| ||||||| || ||  | |||||||||||||||||||||  || ||||| |||||||||||||||||||||    
T  13811825 tacatagacaccatttattcccatacatccttgtacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacg 13811726  T
Q  203 tga 205  Q
    |||    
T  13811725 tga 13811723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 39688814 - 39688918
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||| |||| || |||||| ||||||||||||||| || |||||||||||||||  ||| |||| ||||| ||| ||| |||    
T  39688814 aggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgtacttatgc 39688913  T
Q  193 ggggt 197  Q
    |||||    
T  39688914 ggggt 39688918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 2740452 - 2740345
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | ||||||| || ||  | |||||||||||||| |||||| ||| ||||| |||||||||||||| |    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgcgggat 2740353  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  2740352 ccacgtga 2740345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 20073433 - 20073544
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||| |||||||   ||||||  |||||| ||||||| | |  ||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  20073433 aggaaaatgttagatagacattttttattctcatacacctttgtaaatctcatgaactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgc 20073532  T
Q  193 ggggtccacgtg 204  Q
     |||||||||||    
T  20073533 agggtccacgtg 20073544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 33149560 - 33149667
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||  | |||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| |||||||||||||| |    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 33149659  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  33149660 ccacgtga 33149667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 35785377 - 35785272
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| |||||||||||||| | |||||||||| ||  | ||||||||||||||| ||||| ||| ||||| |||| ||||||||| |    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcgggat 35785278  T
Q  198 ccacgt 203  Q
    ||||||    
T  35785277 ccacgt 35785272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 36875537 - 36875641
Alignment:
Q  97 aaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgggg 196  Q
    |||||||||||||||||| ||||||||||  |    |||||||||| || || ||||||||||||||||||||  ||| ||||| ||||||||||||||     
T  36875537 aaatgttacatagacaccatttatttccaccc----ttgtacaccccatgtattaggaagagagaagaggagaaaaaagagaaagtgtgcttgtgcggga 36875632  T
Q  197 tccacgtga 205  Q
    |||||||||    
T  36875633 tccacgtga 36875641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 40145585 - 40145478
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||||||||||  |||| | | |||||||||   |  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  40145585 aatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 40145486  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  40145485 ccacgtga 40145478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 26720700 - 26720592
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||| ||||||| | ||||||  |||||| | | |||||||| ||| | |||||||||||||||| |||| ||| ||||| ||||||||||    
T  26720700 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26720601  T
Q  192 cggggtcca 200  Q
    |||| ||||    
T  26720600 cgggatcca 26720592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 26990449 - 26990341
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||| ||||||| | ||||||  |||||| | | |||||||| ||| | |||||||||||||||| |||| ||| ||||| ||||||||||    
T  26990449 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26990350  T
Q  192 cggggtcca 200  Q
    |||| ||||    
T  26990349 cgggatcca 26990341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 33825243 - 33825339
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||| |||||| ||||||  |||||| | || ||||||| ||  |||||||||||||||||| |||  ||| ||||| ||||||||||    
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtg 33825339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 6259915 - 6260030
Alignment:
Q  90 taaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttg 189  Q
    ||||||||||||||||||||| | |||||||| | |||||   ||||||| || ||| | |||  ||||||||||||||| |||| ||||| |||||||     
T  6259915 taaaggaaaatgttacatagatatcctttattcctatacacacttgtacatcccatacattagtgagagagaagaggagatgaaagagaaagtgtgcttc 6260014  T
Q  190 tgcggggtccacgtga 205  Q
    || | |||||| ||||    
T  6260015 tgtgaggtccatgtga 6260030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 28177914 - 28177846
Alignment:
Q  137 acaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    |||||| ||| | ||||||||| ||||||||||| ||| ||||| |||| |||||||||||||| ||||    
T  28177914 acaccccatacattaggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtga 28177846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 42414276 - 42414327
Alignment:
Q  150 taggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccac 201  Q
    |||||||||||||||||| || ||| | ||| ||||||||||||||||||||    
T  42414276 taggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccac 42414327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 16328083 - 16327986
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||| ||| ||||| ||||||| |||| |  ||| ||||||| ||||| |||| ||||||||||| | | |||| | ||| ||||||||||    
T  16328083 ggaaaatgttagataaacaccatttattttcatatacttttctacaccccatatattagggagagagaagagaaaatgaaagaaaaagtgtgcttgtg 16327986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 9603993 - 9603889
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    |||||||||| |||||||| ||||||  |||||| ||||||||| || |   |||| |||||||||||| || | |||| ||||| |||| ||||  |||    
T  9603993 aaaatgttacgtagacaccatttattctcatacacctttgtacatcccaagcactaagaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 9603894  T
Q  196 gtcca 200  Q
    |||||    
T  9603893 gtcca 9603889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 17288 - 17197
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaat 182  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  17288 aaaggaaaatgttacatagacaccctttatttccatacacctttgtacaccttatattctaggaagagagaagaggagaggaaagagaaaat 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 17194 - 17125
Alignment:
Q  131 ctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    |||| |||||| ||||| ||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||    
T  17194 ctttatacaccttatattctaggaagagagaagaggaaag-----agaaaatgtgcttgtgcggggtccatgtga 17125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 6e-33; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 12311086 - 12310975
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| | | ||||||||||||||||||||||| |||||| | ||||||||||||| |     
T  12311086 ggaaaatgttacatagacaccctttatttccatacacctttgtacatcttgtatactaggaagagagaagaggaaaggaaagataaaatgtgcttgttca 12310987  T
Q  194 gggtccacgtga 205  Q
    || |||||||||    
T  12310986 ggatccacgtga 12310975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 8080305 - 8080412
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 8080404  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  8080405 ccacgtga 8080412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 19330020 - 19329913
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 19329921  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  19329920 ccacgtga 19329913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 38837395 - 38837288
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||||||||||||||||| | ||||||| || ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  38837395 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38837296  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  38837295 ccacgtga 38837288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 7728086 - 7727982
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||||||||||||||||| |||| || |||||||| |||||||||| ||||| |||||||||||||||| ||| |||| ||||| ||| ||||||||||    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcggg 7727987  T
Q  196 gtcca 200  Q
    |||||    
T  7727986 gtcca 7727982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 32951415 - 32951522
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||| |||||  |||||| | |||||||||| || || ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  32951415 aatgatacatagacaccccttattctcatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32951514  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  32951515 ccacgtga 32951522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 41423864 - 41423753
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| ||||||||||||  |||||| |||||||||||| ||  |||||||||||||||||||||| |||| ||||||| ||||||| ||    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacg 41423765  T
Q  194 gggtccacgtga 205  Q
    || || ||||||    
T  41423764 ggatctacgtga 41423753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 35523061 - 35522952
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||| ||||| |||||| ||||||| | |||||||||| ||| | ||||||||||||||| ||||| ||| ||||| |||||||||    
T  35523061 aaaggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtgcttgt 35522962  T
Q  191 gcggggtcca 200  Q
    ||||| ||||    
T  35522961 gcgggatcca 35522952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 21234584 - 21234480
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||||||||||||| ||||||  |||||| | |||||||||| ||| | ||||||||||| | |||||||| || |||||||||||||||||    
T  21234584 aggaaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagaggaaaggagaggtaagagaaaatgtgcttgtgc 21234485  T
Q  193 ggggt 197  Q
    |||||    
T  21234484 ggggt 21234480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 41915921 - 41915817
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||||||||||||||||| |||| || |||||| | |||||||||| ||||| |||||||||||||||| ||| |||| ||||| ||| ||||||||||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 41915822  T
Q  196 gtcca 200  Q
    |||||    
T  41915821 gtcca 41915817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 11044356 - 11044249
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||| |||||||| |||||| |||||||||||  ||  | ||||||||||||||| ||||||||| ||||| ||| ||||||||||||    
T  11044356 aatgatacatagacactctttattttcatacacctttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtacttgtgcggggt 11044257  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  11044256 ccacgtga 11044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 31736060 - 31735953
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgc 192  Q
    |||||||||||| ||||| ||| |||||| ||||||| | |||||||||| ||| | ||||||||||||||||||||| ||| ||||| |||||||||||    
T  31736060 aggaaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 31735961  T
Q  193 ggggtcca 200  Q
    ||| ||||    
T  31735960 gggatcca 31735953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 26296826 - 26296720
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    |||||||||||| |||||||| | |||||||||||| | |||||||||  ||| | || |||||||||||||||||| ||| |||||||| |||||||||    
T  26296826 ggaaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcg 26296727  T
Q  194 gggtcca 200  Q
    |||||||    
T  26296726 gggtcca 26296720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 8238398 - 8238289
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||||||||||||||||||| || |||| || |||||| | |||||||||| || || |||||||||||||||| ||| |||| ||||| ||| |||||    
T  8238398 aaaggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 8238299  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  8238298 gcggggtcca 8238289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 18207359 - 18207251
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||||||| ||||| ||||||||||  |||||| | |||||||| ||||  |||||||||||||||||||||| |||| ||||| |||||||||| |||    
T  18207359 aaaatgttagatagataccctttattatcatacacccttgtacactctatccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggg 18207260  T
Q  196 gtccacgtg 204  Q
    || ||||||    
T  18207259 gttcacgtg 18207251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 27744225 - 27744337
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||| ||| ||||| |||||| ||||| ||| ||||||| || ||  ||||||||||||||||||||||||| | ||||||||||||| ||    
T  27744225 aaggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtgcttatg 27744324  T
Q  192 cggggtccacgtg 204  Q
     ||| ||||||||    
T  27744325 agggatccacgtg 27744337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 46033719 - 46033819
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| ||||||  |||||| | |||||||||| ||| | |||||| |||||||||||||| ||| ||||||| ||||||||||    
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgcg 46033818  T
Q  194 g 194  Q
    |    
T  46033819 g 46033819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 38267218 - 38267111
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||| | | |||||||||||||| ||| ||||| || ||  | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  38267218 aatgatacatagatatcatttatttccatacaccttcgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38267119  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  38267118 ccacgtga 38267111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 22343543 - 22343437
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||| || |||||| | |||||||||  || || |||||||||||||||| ||| |||| ||||| ||| ||||||||    
T  22343543 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 22343444  T
Q  194 gggtcca 200  Q
    |||||||    
T  22343443 gggtcca 22343437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 38044379 - 38044273
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||||||||| |||| || |||||| | |||||||||| || || |||||||||| ||||| ||| |||| ||||| ||| ||||||||    
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcg 38044280  T
Q  194 gggtcca 200  Q
    |||||||    
T  38044279 gggtcca 38044273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 45223222 - 45223128
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||||| ||||| | | ||||||||||| |||| |||| |||||||| ||||||    
T  45223222 aaaatgtcacatagacatcctttatttacatacatctttgtacaccccatatatttgaaagagagaagatgagatgaaagagaaaatgcgcttgt 45223128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 36208301 - 36208244
Alignment:
Q  148 actaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  36208301 actaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtga 36208244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 4999436 - 4999543
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| ||||||  |||||| | |||||||||| ||  | ||||||||||||||||||||  ||| ||||| |||| |||||||||||    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggt 4999535  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  4999536 ccacgtga 4999543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 7389566 - 7389460
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||| |||||||| ||||||| | | |||||||| || || ||||||||||||  ||||||| ||| ||||| ||||||||||||||||    
T  7389566 aatgatacatagacatcctttattcccatacaccct-gtacaccccatgtattaggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggt 7389468  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  7389467 ccacgtga 7389460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 40957885 - 40957778
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||| |||||| |||||| | |||||||||| ||  | ||||||||||||||| ||||| ||| ||||| ||||||||| |||| |    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggat 40957786  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  40957785 ccacgtga 40957778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 16374743 - 16374853
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| | ||| | ||||||||||||| | |||| |||| ||||  |||||||||| |     
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtga 16374842  T
Q  195 ggtccacgtga 205  Q
    | |||||||||    
T  16374843 gatccacgtga 16374853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 39255844 - 39255952
Alignment:
Q  96 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggg 195  Q
    ||||||||||||||||||||||||||  |||||| | |||||||  ||||  ||  |||||||||||||||||| |||| ||||| ||| |||||| ||     
T  39255844 aaaatgttacatagacaccctttattatcatacacccttgtacattctatccaccgggaagagagaagaggagatgaaagagaaagtgttcttgtgtgga 39255943  T
Q  196 gtccacgtg 204  Q
    |||||||||    
T  39255944 gtccacgtg 39255952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 3784157 - 3784066
Alignment:
Q  114 cctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    ||||||||  |||||||  |||||||||| ||  | ||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||    
T  3784157 cctttattcacatacattcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtga 3784066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 35468773 - 35468880
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcg 193  Q
    ||||||||||||||| ||||| ||||||  |||||||| || |||| |  ||  |||||||||||||||||||| |||||| ||||| |||| ||||||     
T  35468773 ggaaaatgttacatatacaccttttattctcatacatccttatacatctcatgaactaggaagagagaagaggataggaaagagaaagtgtgtttgtgca 35468872  T
Q  194 gggtccac 201  Q
    ||||||||    
T  35468873 gggtccac 35468880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 35137659 - 35137604
Alignment:
Q  150 taggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacgtga 205  Q
    ||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||    
T  35137659 taggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtga 35137604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 19436114 - 19436216
Alignment:
Q  103 tacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccacg 202  Q
    |||||||||||| ||||||  |||||| | |||||||||| ||  | |||||||||| ||||| |||| ||| ||||| ||||||| |||||| ||||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacg 19436213  T
Q  203 tga 205  Q
    |||    
T  19436214 tga 19436216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 46374741 - 46374807
Alignment:
Q  93 aggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagaga 159  Q
    |||||||||||||||||||||| |||||| ||||||| | |||||||||| ||| | ||||||||||    
T  46374741 aggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagaga 46374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 1766702 - 1766795
Alignment:
Q  97 aaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||||||||||||||| |||| ||  |||| |   ||||| |||  |||||||| |||||||||||||||||||||| ||||| |||||||||    
T  1766702 aaatgttacatagacacactttgttctcatatactcttgtatacctcatatactacgaagagagaagaggagaggaaagagaaagtgtgcttgt 1766795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 2318160 - 2318205
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacac 140  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacac 2318205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 32564341 - 32564450
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    ||||||| ||||||||||||||   |||| || |||||| | |||||||||  || || |||||||||||||||| ||| |||| ||||| |||  ||||    
T  32564341 aaaggaagatgttacatagacatattttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtatttgt 32564440  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  32564441 gcggggtcca 32564450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 40846028 - 40846137
Alignment:
Q  91 aaaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgt 190  Q
    |||||||||||||||||||| ||| |||| || |||||| | ||||||| |  || |  |||||||||||||||| ||| |||| ||||| |||  ||||    
T  40846028 aaaggaaaatgttacatagataccttttaattgcatacacccttgtacatctcatcttttaggaagagagaagagaagaagaaagagaaagtgtatttgt 40846127  T
Q  191 gcggggtcca 200  Q
    ||||||||||    
T  40846128 gcggggtcca 40846137  T

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Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 3694491 - 3694442
Alignment:
Q  152 ggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggtccac 201  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| |||||    
T  3694491 ggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccac 3694442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 3434730 - 3434666
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaa 162  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| ||  | |||||||||||||    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattaggaagagagaa 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 10343530 - 10343573
Alignment:
Q  143 tatatactaggaagagagaagaggagaggaaatagaaaatgtgc 186  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||    
T  10343530 tatacactaggaagagagaagaggagaggaaagagaaagtgtgc 10343573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 32046018 - 32045933
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaa 180  Q
    ||||||||||||||||||  |||||||| |||||| | ||||||| |  ||||| | | ||||||||||| |||| |||| |||||    
T  32046018 gaaaatgttacatagacattctttatttacatacacccttgtacatctcatatatttgaaagagagaagatgagatgaaaaagaaa 32045933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 36208336 - 36208304
Alignment:
Q  94 ggaaaatgttacatagacaccctttatttccat 126  Q
    ||||||||||||||||||||||||||||| |||    
T  36208336 ggaaaatgttacatagacaccctttattttcat 36208304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 848 - 958
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    |||||||||||||| |||||||||||| |||||||   |||||||||| ||  ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  195 ggtccacgtga 205  Q
    | | |||||||    
T  948 gattcacgtga 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 848 - 958
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    |||||||||||||| |||||||||||| |||||||   |||||||||| ||  ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  195 ggtccacgtga 205  Q
    | | |||||||    
T  948 gattcacgtga 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 8779 - 8892
Alignment:
Q  92 aaggaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtg 191  Q
    ||||||||||||||||||||||| ||||||   ||||| | |||||||||| ||||| ||||||||||||||| | ||||||| ||||||||| ||||||    
T  8779 aaggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaaatgtacttgtg 8878  T
Q  192 cggggtccacgtga 205  Q
     |||||||||||||    
T  8879 tggggtccacgtga 8892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 10031 - 10138
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| ||||||||||||| ||||||||||||| | |||||||||||||  | ||||||||||||||||||||| ||| ||||| ||||||||| || |||    
T  10031 aatgatacatagacacccattatttccatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacgcggt 10130  T
Q  198 ccacgtga 205  Q
    ||||||||    
T  10131 ccacgtga 10138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 4207 - 4102
Alignment:
Q  98 aatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcggggt 197  Q
    |||| |||||||||||| |||||| ||||||| | |||||||||| ||  | |||||||||||||||| |||| ||| ||||| ||||||| |||||| |    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 4108  T
Q  198 ccacgt 203  Q
    ||||||    
T  4107 ccacgt 4102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 152679 - 152574
Alignment:
Q  95 gaaaatgttacatagacaccctttatttccatacatctttgtacaccctatatactaggaagagagaagaggagaggaaatagaaaatgtgcttgtgcgg 194  Q
    |||||||||||||||||||| |||| || |||||| | ||||||| || || || ||| |||||||||||| ||| |||| ||||| |||  ||||||||    
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcgg 152580  T
Q  195 ggtcca 200  Q
    | ||||    
T  152579 gatcca 152574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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