View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7918_low_2 (Length: 345)
Name: NF7918_low_2
Description: NF7918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7918_low_2 |
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Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 4 - 290
Target Start/End: Original strand, 52887384 - 52887668
Alignment:
| Q |
4 |
atttaaaacttacacatgtaaccgtattattcattgatttatgaaacataaaatgagtgagctaaaactaaagtattaagaaagaaaaaagcagaaagga |
103 |
Q |
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| T |
52887384 |
atttaaaacttacacatgtaatcgtattattcattcatttatgaa-cataaaatgagtgagctaaag-taaagtattaagaaagaaaaaagcagaaagga |
52887481 |
T |
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| Q |
104 |
aggacattatagtaaataaacaaggtagaataattgaagagatagtaaaaaagatactgaggaggtgaatggtagtggtcccacaataggaacaagaaag |
203 |
Q |
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| T |
52887482 |
aggacattatagtaaataaacaaggtagaataattgaagagatagtaaaaaagatactgaggaggtgaatggtagtggtcccacaataggaacaagaaag |
52887581 |
T |
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| Q |
204 |
aaactgagcactgtctcttcctccgttctcatctgtatcttactaaggtaaggtgagacctccactctgcaagtgtatgttactgtg |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52887582 |
aaactgagcactgtctcttcctccgttctcatctgtatcttactaaggtaaggtgagacctccactctgcaagtgtatgttactgtg |
52887668 |
T |
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