View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7920_high_22 (Length: 280)
Name: NF7920_high_22
Description: NF7920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7920_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 21 - 263
Target Start/End: Original strand, 25785234 - 25785476
Alignment:
| Q |
21 |
aaacgaaagagaaataatgaacaaaacgagagtcacagtagtataagagtgataaacacaaagtcatcgtgacttttccacattaaaattacttaatcct |
120 |
Q |
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| T |
25785234 |
aaacgaaaaagaaataatgaacaagacgagaatcagaatagtataagagagataaatataaagtcatcgtgacttttccacattaaaattacttaatcct |
25785333 |
T |
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| Q |
121 |
aatctactttcatctatctagcagtagcccaacatattcaattatttcacaaatttgtgagaatcaatatgatatattttatgatacagttagtctatac |
220 |
Q |
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|||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
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| T |
25785334 |
aatccatgttcatctatctagtagtagcccaacatattcaattatttcacaaatttgtgagaatcaatgtgatatattttatcatacagttagtctatac |
25785433 |
T |
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| Q |
221 |
aagccaaatgaaaaatgacttagtacaaactgcaataccatct |
263 |
Q |
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| T |
25785434 |
aagccaaatgaaaaatgacttagtacaaactgcaataccatct |
25785476 |
T |
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