View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7920_high_31 (Length: 229)
Name: NF7920_high_31
Description: NF7920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7920_high_31 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 12239488 - 12239702
Alignment:
| Q |
1 |
tccacaacaagaacattaaacttgcatgcattcatcattcccacgtgtcatttcccttctaatcctaagtttttccatgcaaacttctcagcttcttctc |
100 |
Q |
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| T |
12239488 |
tccacaacaagaacattaaacttgcatgcattcatcattcccacgtgtcatttcccttctaatcctaagtttttccatgcaaacttctcagcttcttctc |
12239587 |
T |
|
| Q |
101 |
acacccccattttagaagaaacttcttccaacacccccttgatccatttagatgttaacttttctgacactacaaaatattccaagccagaaattgatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12239588 |
acacccccattttagaagaaacttcttccaacacccccttgatccatttagatgttaacttttctgacactacaaaatattccaagccagaaattgatca |
12239687 |
T |
|
| Q |
201 |
gaatttgaatgattt |
215 |
Q |
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||||||||||||||| |
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| T |
12239688 |
gaatttgaatgattt |
12239702 |
T |
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