View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7920_low_34 (Length: 214)
Name: NF7920_low_34
Description: NF7920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7920_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 34426897 - 34426700
Alignment:
| Q |
1 |
agattagtgctctgtccgtcaatgtcatcaatcatcactcttagcagtcacacgtgactttcaacatttcacacatgacatacctacttatacttctacc |
100 |
Q |
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| T |
34426897 |
agattggtcctctgtgcgtcaatgtcatcaatcatcacttttagcagtcacacgtgactttcaacatttcacacatgacatacctacttatacttctacc |
34426798 |
T |
|
| Q |
101 |
act-------aatgctaaagaaatccttcaaaaacaactaatattaaagaatattatctctcttaaataactaatccaatagaccaatttatgccttt |
191 |
Q |
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| T |
34426797 |
acttaccactaatgctaaagaaatccttcaaaaacaactaatattaaagaatattatctctcttaaataactaatccaatagaccaatttatgccttt |
34426700 |
T |
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