View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7922_low_5 (Length: 457)
Name: NF7922_low_5
Description: NF7922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7922_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 420; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 9 - 440
Target Start/End: Original strand, 39684679 - 39685110
Alignment:
| Q |
9 |
atattattctaggttttaattttattgtgcttctgagatatgtttctggtaatagtttgcttccttgtatctatggcctccttatggtgcataacttttt |
108 |
Q |
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| T |
39684679 |
atattattctaggttttaattttattgtgcttctgagatatatttctggtaatagtttgcttccttgtatctatggcctccttatggtgcataacttttt |
39684778 |
T |
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| Q |
109 |
ctgatgtgctatagttcattcatccatcttcttcgttagcggtttcttgtatgagatttgatgttcaatttcaatatcatattgttttcattggcagtcc |
208 |
Q |
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| T |
39684779 |
ctgatgtgctatagttcattcatccatcttcttcgttagcggtttcttgtatgagatttgatgttcaatttcaatatcatattgttttcattggcagtcc |
39684878 |
T |
|
| Q |
209 |
agttcgaagcattgtgtcggaagatgaggatcatccttttccaaacaacgaaagagattacggagatgatttgttaatggaatgggctatggttagtgca |
308 |
Q |
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| T |
39684879 |
agttcgaagcactgtgtcggaagatgaggatcatccttttccaaacaacgaaagagattacggagatgatttgttaatggaatgggctatggttagtgca |
39684978 |
T |
|
| Q |
309 |
aagtagttttccattttgttttgcattaattagatttaggtgattgttgattggcatttaacatgttttctttggtgtgaataactttgataggagcata |
408 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
39684979 |
aagtagttttccattttgttttgcattaattagatttaggtgattgttgattggcatttaacattttttctttggtgtgaataactttgataggagcata |
39685078 |
T |
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| Q |
409 |
agaatgatttactacagatagtatgtagatat |
440 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
39685079 |
agaatgatttactacagatagtatgtagatat |
39685110 |
T |
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