View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7923_low_10 (Length: 293)
Name: NF7923_low_10
Description: NF7923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7923_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 4895071 - 4894798
Alignment:
| Q |
1 |
tttcaatggaactccaaaaactatagaccataagaagtgtccaaagtactaagtaggatttaatattagcttagtattgggattggtcatgaccatttca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
4895071 |
tttcaatggaactccaaaaactatagaccataagaagtgtccaaagtactaaataggatttaatattagcttagtattgggatcggtcatgaccatttca |
4894972 |
T |
|
| Q |
101 |
ttttcatttatttcctcttcatcttgttgattcaaatttccaaatggtggaaaggacagaaggaacaaaaaattgaaagttaatgtatagaagctgcaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4894971 |
ttttcatttatttcctcttcatcttgttgattcaaatttccaaatggtggaaaggacagaaggaacaaaaaattgaaagttaatgtatagaagctgcaaa |
4894872 |
T |
|
| Q |
201 |
cctatgatttaatttatatttccctaatgtgcagggacgattctgaccaacgtttccatttgactataagttag |
274 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4894871 |
cctatgatttaatttatatttccctaatgcgcagggacgattctgaccaacgtttccatttgactataagttag |
4894798 |
T |
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