View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7928_low_5 (Length: 402)

Name: NF7928_low_5
Description: NF7928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7928_low_5
NF7928_low_5
[»] chr8 (53 HSPs)
chr8 (238-384)||(43489510-43489656)
chr8 (238-384)||(41386178-41386325)
chr8 (238-380)||(7148670-7148812)
chr8 (238-380)||(29259587-29259729)
chr8 (238-384)||(43604680-43604826)
chr8 (238-384)||(2113419-2113565)
chr8 (238-384)||(10795683-10795829)
chr8 (238-384)||(4655698-4655844)
chr8 (238-380)||(40264592-40264734)
chr8 (238-377)||(9458144-9458283)
chr8 (238-380)||(41964900-41965043)
chr8 (78-233)||(4656012-4656167)
chr8 (82-233)||(7148970-7149121)
chr8 (82-233)||(9458443-9458594)
chr8 (82-233)||(40264274-40264425)
chr8 (87-233)||(10795379-10795525)
chr8 (96-233)||(42275880-42276017)
chr8 (81-219)||(41385868-41386006)
chr8 (296-384)||(42275586-42275674)
chr8 (90-185)||(43604382-43604477)
chr8 (87-188)||(1605804-1605905)
chr8 (96-188)||(43489901-43489992)
chr8 (103-233)||(39371185-39371316)
chr8 (136-233)||(2113724-2113821)
chr8 (73-148)||(37566511-37566586)
chr8 (88-187)||(38805929-38806028)
chr8 (78-187)||(18957829-18957938)
chr8 (83-148)||(30381822-30381887)
chr8 (238-290)||(39371484-39371536)
chr8 (81-188)||(35143067-35143174)
chr8 (82-188)||(14781247-14781353)
chr8 (83-188)||(39466634-39466739)
chr8 (80-188)||(16365266-16365374)
chr8 (78-150)||(32498918-32498990)
chr8 (84-188)||(44724898-44725002)
chr8 (82-188)||(18305076-18305182)
chr8 (87-148)||(17791590-17791651)
chr8 (82-188)||(42304740-42304848)
chr8 (136-188)||(41964650-41964702)
chr8 (78-145)||(10128287-10128354)
chr8 (83-222)||(42366850-42366983)
chr8 (83-188)||(4030443-4030549)
chr8 (99-188)||(9209891-9209980)
chr8 (82-188)||(19716978-19717086)
chr8 (83-188)||(37857867-37857971)
chr8 (82-188)||(28620665-28620770)
chr8 (90-188)||(43307661-43307759)
chr8 (85-149)||(9287608-9287673)
chr8 (87-188)||(14062473-14062574)
chr8 (135-187)||(5266793-5266845)
chr8 (197-233)||(41964697-41964733)
chr8 (201-233)||(43604479-43604511)
chr8 (124-152)||(43960088-43960116)
[»] chr7 (43 HSPs)
chr7 (238-384)||(27417967-27418113)
chr7 (238-380)||(12252746-12252888)
chr7 (238-384)||(35089416-35089562)
chr7 (238-380)||(43056987-43057129)
chr7 (238-384)||(33475116-33475262)
chr7 (238-384)||(47912865-47913011)
chr7 (238-384)||(47913642-47913788)
chr7 (238-380)||(152488-152630)
chr7 (238-384)||(30111419-30111560)
chr7 (81-233)||(12252384-12252536)
chr7 (81-233)||(30111729-30111881)
chr7 (81-233)||(43056686-43056838)
chr7 (82-233)||(152797-152948)
chr7 (79-233)||(27417644-27417798)
chr7 (96-233)||(35089110-35089247)
chr7 (82-188)||(47912523-47912629)
chr7 (81-229)||(33475479-33475625)
chr7 (17-81)||(46143277-46143341)
chr7 (78-188)||(34114536-34114646)
chr7 (82-188)||(28343299-28343405)
chr7 (82-188)||(23102280-23102386)
chr7 (83-148)||(39300426-39300492)
chr7 (82-184)||(46197104-46197206)
chr7 (82-188)||(510635-510743)
chr7 (84-188)||(12741362-12741467)
chr7 (69-188)||(46035435-46035555)
chr7 (78-188)||(29893945-29894056)
chr7 (85-151)||(30889141-30889207)
chr7 (86-188)||(42677250-42677352)
chr7 (90-148)||(47032341-47032399)
chr7 (79-188)||(48136358-48136467)
chr7 (85-188)||(29613906-29614010)
chr7 (81-188)||(3023914-3024020)
chr7 (82-184)||(30823580-30823682)
chr7 (86-188)||(37971509-37971611)
chr7 (83-188)||(18839283-18839388)
chr7 (96-148)||(36354665-36354716)
chr7 (82-150)||(39785123-39785193)
chr7 (82-188)||(9881400-9881505)
chr7 (84-146)||(32631550-32631612)
chr7 (76-129)||(21068406-21068459)
chr7 (86-188)||(32884742-32884850)
chr7 (82-150)||(40459832-40459901)
[»] chr3 (61 HSPs)
chr3 (238-384)||(26556481-26556627)
chr3 (238-384)||(36054329-36054475)
chr3 (238-380)||(30589471-30589613)
chr3 (238-380)||(38629129-38629271)
chr3 (238-384)||(24150145-24150291)
chr3 (238-384)||(26292881-26293027)
chr3 (238-384)||(35731497-35731643)
chr3 (238-384)||(50899742-50899888)
chr3 (238-384)||(2125016-2125162)
chr3 (238-384)||(19551475-19551621)
chr3 (238-384)||(26005172-26005317)
chr3 (82-233)||(30589781-30589932)
chr3 (82-233)||(36054009-36054160)
chr3 (83-222)||(38628820-38628959)
chr3 (82-233)||(2124704-2124855)
chr3 (78-233)||(24149832-24149987)
chr3 (79-233)||(46223302-46223456)
chr3 (82-233)||(26556803-26556954)
chr3 (79-233)||(26292560-26292712)
chr3 (82-233)||(26004847-26004999)
chr3 (238-338)||(23754180-23754280)
chr3 (107-233)||(50899470-50899596)
chr3 (83-188)||(23360558-23360663)
chr3 (83-188)||(23367398-23367503)
chr3 (231-338)||(23697604-23697712)
chr3 (231-338)||(23716060-23716168)
chr3 (231-338)||(23734516-23734624)
chr3 (84-233)||(19551153-19551303)
chr3 (81-233)||(23697907-23698060)
chr3 (81-233)||(23716362-23716515)
chr3 (81-233)||(23734818-23734971)
chr3 (132-233)||(23754481-23754582)
chr3 (85-152)||(35731872-35731939)
chr3 (85-219)||(45214086-45214220)
chr3 (81-154)||(33417080-33417153)
chr3 (80-188)||(45254552-45254660)
chr3 (81-188)||(24573431-24573538)
chr3 (81-188)||(31645362-31645469)
chr3 (78-188)||(11432536-11432646)
chr3 (83-148)||(27593967-27594033)
chr3 (82-188)||(36673259-36673365)
chr3 (82-188)||(52617086-52617192)
chr3 (78-147)||(28845650-28845721)
chr3 (83-188)||(34290167-34290272)
chr3 (87-188)||(44904961-44905062)
chr3 (82-188)||(50902417-50902527)
chr3 (84-141)||(6783189-6783247)
chr3 (81-188)||(10728123-10728232)
chr3 (82-188)||(18750622-18750730)
chr3 (100-188)||(23752520-23752609)
chr3 (79-152)||(44707962-44708035)
chr3 (97-163)||(33416998-33417061)
chr3 (85-148)||(20833927-20833990)
chr3 (85-148)||(43152051-43152114)
chr3 (78-152)||(35347085-35347159)
chr3 (81-188)||(17947207-17947316)
chr3 (196-233)||(35731810-35731847)
chr3 (101-150)||(40898095-40898144)
chr3 (82-150)||(27239326-27239393)
chr3 (124-188)||(34483246-34483310)
chr3 (83-188)||(50761222-50761329)
[»] chr1 (37 HSPs)
chr1 (238-384)||(52706017-52706163)
chr1 (238-384)||(14389010-14389156)
chr1 (238-384)||(26882135-26882281)
chr1 (238-384)||(45319093-45319239)
chr1 (238-383)||(45535388-45535531)
chr1 (78-223)||(52706334-52706479)
chr1 (87-233)||(26881820-26881966)
chr1 (86-233)||(45535692-45535840)
chr1 (79-233)||(14389359-14389512)
chr1 (81-233)||(45319411-45319563)
chr1 (102-188)||(39758864-39758950)
chr1 (102-188)||(39764218-39764304)
chr1 (260-378)||(39758503-39758628)
chr1 (260-378)||(39763857-39763982)
chr1 (79-148)||(10897662-10897732)
chr1 (82-148)||(36403105-36403171)
chr1 (82-188)||(48198936-48199042)
chr1 (82-188)||(48207519-48207625)
chr1 (79-188)||(51825957-51826066)
chr1 (81-188)||(29395536-29395643)
chr1 (82-188)||(6313565-6313671)
chr1 (82-188)||(25613081-25613187)
chr1 (79-188)||(20111678-20111787)
chr1 (82-188)||(9321618-9321725)
chr1 (82-188)||(28386557-28386664)
chr1 (81-188)||(51702583-51702690)
chr1 (87-188)||(1923373-1923474)
chr1 (82-145)||(33242460-33242524)
chr1 (81-148)||(9174908-9174975)
chr1 (81-148)||(9832738-9832804)
chr1 (14-81)||(27650317-27650384)
chr1 (83-185)||(49231976-49232078)
chr1 (79-188)||(45273550-45273659)
chr1 (82-188)||(43556672-43556777)
chr1 (78-148)||(8139971-8140042)
chr1 (16-81)||(44302570-44302635)
chr1 (101-188)||(29220101-29220191)
[»] chr5 (24 HSPs)
chr5 (238-380)||(11633004-11633146)
chr5 (238-384)||(3603784-3603931)
chr5 (238-384)||(13950110-13950255)
chr5 (78-233)||(40411353-40411509)
chr5 (82-233)||(11632685-11632836)
chr5 (87-233)||(10553672-10553818)
chr5 (82-233)||(13949800-13949951)
chr5 (83-227)||(10553439-10553583)
chr5 (91-185)||(18676939-18677033)
chr5 (82-219)||(3603459-3603596)
chr5 (81-224)||(26629510-26629653)
chr5 (83-188)||(13717084-13717189)
chr5 (81-188)||(4239578-4239686)
chr5 (82-188)||(13999213-13999320)
chr5 (82-188)||(40012816-40012923)
chr5 (77-148)||(6827946-6828018)
chr5 (81-188)||(2275268-2275374)
chr5 (82-188)||(39853341-39853447)
chr5 (14-56)||(41361923-41361965)
chr5 (100-188)||(1459312-1459401)
chr5 (79-148)||(6901352-6901421)
chr5 (81-188)||(4549362-4549471)
chr5 (83-188)||(13926921-13927027)
chr5 (78-146)||(7858125-7858194)
[»] chr2 (43 HSPs)
chr2 (238-381)||(7487462-7487605)
chr2 (238-380)||(6288865-6289007)
chr2 (238-384)||(21735983-21736129)
chr2 (238-380)||(42626721-42626863)
chr2 (238-373)||(45547548-45547683)
chr2 (82-233)||(29941825-29941976)
chr2 (79-233)||(45547851-45548005)
chr2 (238-347)||(29941549-29941658)
chr2 (82-188)||(7486956-7487062)
chr2 (83-233)||(6288556-6288706)
chr2 (79-233)||(35171377-35171535)
chr2 (307-380)||(35172007-35172080)
chr2 (238-321)||(35171749-35171832)
chr2 (86-222)||(36599148-36599284)
chr2 (78-148)||(24192658-24192728)
chr2 (78-219)||(27979847-27979988)
chr2 (78-219)||(28066377-28066518)
chr2 (87-219)||(36597649-36597781)
chr2 (82-188)||(25289144-25289250)
chr2 (81-148)||(11535695-11535762)
chr2 (82-188)||(18178261-18178367)
chr2 (82-188)||(26789774-26789880)
chr2 (81-219)||(2289234-2289372)
chr2 (84-148)||(24935292-24935356)
chr2 (84-148)||(25683985-25684049)
chr2 (79-188)||(3464576-3464685)
chr2 (83-188)||(28845567-28845672)
chr2 (77-184)||(10658423-10658530)
chr2 (84-148)||(12135555-12135619)
chr2 (96-188)||(43023507-43023599)
chr2 (82-188)||(15283597-15283704)
chr2 (100-188)||(13832685-13832774)
chr2 (132-222)||(14919805-14919895)
chr2 (136-233)||(42626455-42626550)
chr2 (197-233)||(7487057-7487093)
chr2 (101-188)||(43079472-43079560)
chr2 (85-148)||(30046606-30046669)
chr2 (85-148)||(30137650-30137713)
chr2 (78-188)||(38821245-38821356)
chr2 (82-150)||(214624-214693)
chr2 (87-188)||(34027781-34027882)
chr2 (99-152)||(35906983-35907036)
chr2 (100-188)||(7027894-7027982)
[»] scaffold0016 (2 HSPs)
scaffold0016 (238-384)||(81094-81240)
scaffold0016 (82-233)||(80792-80943)
[»] scaffold0237 (2 HSPs)
scaffold0237 (238-377)||(20757-20896)
scaffold0237 (82-233)||(20446-20597)
[»] chr6 (17 HSPs)
chr6 (238-373)||(6476064-6476199)
chr6 (238-377)||(29865062-29865201)
chr6 (238-384)||(3109668-3109814)
chr6 (80-233)||(3109347-3109500)
chr6 (82-233)||(29864751-29864902)
chr6 (83-233)||(6475743-6475893)
chr6 (82-188)||(7104513-7104619)
chr6 (82-188)||(8790011-8790117)
chr6 (84-148)||(35165661-35165725)
chr6 (82-188)||(30384171-30384277)
chr6 (82-188)||(31068409-31068515)
chr6 (82-188)||(31896626-31896732)
chr6 (84-188)||(14261552-14261656)
chr6 (79-188)||(4199583-4199693)
chr6 (103-188)||(27585205-27585290)
chr6 (82-119)||(10008374-10008411)
chr6 (108-188)||(34774374-34774454)
[»] scaffold0153 (2 HSPs)
scaffold0153 (238-384)||(34126-34272)
scaffold0153 (81-233)||(33823-33975)
[»] chr4 (39 HSPs)
chr4 (238-380)||(8583320-8583462)
chr4 (238-380)||(42217756-42217898)
chr4 (243-380)||(42315504-42315641)
chr4 (238-380)||(56398633-56398776)
chr4 (247-380)||(3435294-3435427)
chr4 (81-233)||(7820885-7821037)
chr4 (90-233)||(8583008-8583151)
chr4 (82-219)||(42315832-42315969)
chr4 (83-233)||(42217448-42217597)
chr4 (96-233)||(3434840-3434977)
chr4 (81-188)||(7808979-7809086)
chr4 (307-384)||(7820676-7820753)
chr4 (83-224)||(44930558-44930695)
chr4 (83-223)||(56398986-56399125)
chr4 (307-380)||(7808754-7808827)
chr4 (328-378)||(44930422-44930472)
chr4 (82-148)||(47686842-47686908)
chr4 (82-188)||(48262064-48262170)
chr4 (81-151)||(28846168-28846239)
chr4 (82-188)||(27769053-27769159)
chr4 (81-187)||(32683133-32683239)
chr4 (82-188)||(38234592-38234698)
chr4 (82-148)||(54510581-54510647)
chr4 (82-188)||(5442382-5442486)
chr4 (83-188)||(23988186-23988291)
chr4 (81-188)||(54342136-54342243)
chr4 (76-120)||(388610-388654)
chr4 (86-148)||(5117836-5117900)
chr4 (82-188)||(50019180-50019286)
chr4 (84-188)||(32323058-32323163)
chr4 (100-188)||(49833989-49834078)
chr4 (100-188)||(29649147-29649235)
chr4 (85-188)||(41726095-41726198)
chr4 (78-150)||(49500635-49500707)
chr4 (79-152)||(5104966-5105040)
chr4 (83-185)||(25936909-25937010)
chr4 (79-111)||(44929872-44929904)
chr4 (100-188)||(48531938-48532026)
chr4 (83-187)||(52110242-52110345)
[»] scaffold0472 (1 HSPs)
scaffold0472 (82-188)||(937-1043)
[»] scaffold0839 (1 HSPs)
scaffold0839 (84-188)||(3114-3219)
[»] scaffold0940 (1 HSPs)
scaffold0940 (81-185)||(3572-3676)
[»] scaffold0042 (1 HSPs)
scaffold0042 (82-188)||(57169-57275)
[»] scaffold0054 (1 HSPs)
scaffold0054 (84-188)||(36401-36506)
[»] scaffold0095 (1 HSPs)
scaffold0095 (85-150)||(21800-21865)


Alignment Details
Target: chr8 (Bit Score: 135; Significance: 3e-70; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 43489656 - 43489510
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  43489656 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 43489557  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43489556 agtttattgattataataatttgattgaaaaatgcatgttacaggta 43489510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 41386178 - 41386325
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  41386178 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 41386277  T
Q  338 agtttattgattataataatttgatt-gaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  41386278 agtttattgattataataatttgattggaaaaatgcatgttacaggta 41386325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 380
Target Start/End: Complemental strand, 7148812 - 7148670
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  7148812 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattttggacatatgatatcaaaataaatagacctaaaaataagttatgtt 7148713  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  7148712 agtttattaattataataatttgattgaaaaatgcatgttaca 7148670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 29259587 - 29259729
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  29259587 aaaaaagactattagataatatactactggcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 29259686  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29259687 agtttattgattataataatttgattgaaaaatgcatgttaca 29259729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 43604680 - 43604826
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  43604680 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatataatatcaaaataaatagatctaaaaataagttatgtt 43604779  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43604780 agtttattgattataataatttgattgaaaaatgcatgttacaggta 43604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 2113565 - 2113419
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||    
T  2113565 aaaaaagactattagataatatagtactaacaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatttt 2113466  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2113465 agtttattgattataataatttgattgaaaaatgcatgttacaggta 2113419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 10795683 - 10795829
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||    
T  10795683 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttaagtt 10795782  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||    
T  10795783 aatttattgattataataatttgattgaaaaatgcatgtaacaggta 10795829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 4655844 - 4655698
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||    
T  4655844 aaaaaagactattagataatatactactagcaggttaattgatcttaaaaattctagacatatgatatcaaaacaaatagacctaaaaataagttatgtt 4655745  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  4655744 agtttattgattataataaattgattgaaaaatgcatgttacaggta 4655698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 40264592 - 40264734
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  40264592 aaaaaagactattagataatatactactagcagattgattaatcttaaaaatcatggacatatgatatcaaaataaatagatctaaaaataagttatgtt 40264691  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40264692 agtttattgattataataatttgattgaaaaatgcatgttaca 40264734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 9458283 - 9458144
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  9458283 aaaaaagactattagataatatactactagcaggttggttaatcttaaaaatcatggacatatgatatcaaaataaatagacctaaaaataagttatgtt 9458184  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgtt 377  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  9458183 agtttattgattattataatttaattgaaaaatgcatgtt 9458144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 41964900 - 41965043
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaa-taaatagacctaaaaataagttatgt 336  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  41964900 aaaaaaaactattagataatatactactaacaggttgattgatcttaaaaattctggacatatgatatcaaaaataaatagacctaaaaataagttatgt 41964999  T
Q  337 tagtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    | ||||||||||||||||||||||||||||||||||||||||||    
T  41965000 tggtttattgattataataatttgattgaaaaatgcatgttaca 41965043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 4656167 - 4656012
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  4656167 tttagggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtggga 4656068  T
Q  178 ttttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||||||       |||||||||||||||||||||||||||| |||||||||    
T  4656067 ttttaaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 4656012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 82 - 233
Target Start/End: Complemental strand, 7149121 - 7148970
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  7149121 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 7149022  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||||||| |||||||||    
T  7149021 aaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 7148970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 82 - 233
Target Start/End: Complemental strand, 9458594 - 9458443
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  9458594 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 9458495  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||| ||| |||||||||    
T  9458494 aaaagactttttttgaaagactttttacaatcaagattgtttgcaagatttt 9458443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 40264274 - 40264425
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  40264274 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 40264373  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||| ||| |||||||||    
T  40264374 aaaagactttttttgaaagactttttacaatcaagattgtttgcaagatttt 40264425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 10795379 - 10795525
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaag 186  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  10795379 tgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggattttaaaag 10795478  T
Q  187 acnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||       |||||||||||||||||||||||||||| |||||||||    
T  10795479 actttttttgaaagactttttacaatcaagattctttgcaagatttt 10795525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 42276017 - 42275880
Alignment:
Q  96 ttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagacnnnnnnn 195  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||           
T  42276017 ttgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtggaattttaaaagacttttttt 42275918  T
Q  196 gaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||||||||||||||||||||||| |||||||||    
T  42275917 gaaagactttttacaatcaagattctttgcaagatttt 42275880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 41385868 - 41386006
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||   | ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  41385868 agggggtgtattggattgagattttaaaagactgttttgatagaaatttttttgaagattttaaaagactttgttggattgtattaattttgtgggattt 41385967  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagatt 219  Q
    ||||||||       ||||||||||||||||||||||||    
T  41385968 taaaagactttttttgaaagactttttacaatcaagatt 41386006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 296 - 384
Target Start/End: Complemental strand, 42275674 - 42275586
Alignment:
Q  296 catatgatatcaaaataaatagacctaaaaataagttatgttagtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42275674 catataatatcaaaataaatagacctaaaaataagttatgttagtttattgattataataatttgattgaaaaatgcatgttaaaggta 42275586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 43604382 - 43604477
Alignment:
Q  90 attgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaa 185  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  43604382 attggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggattttaaaa 43604477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 1605804 - 1605905
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaag 186  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||   | |||||||| ||||||||||||||||||||    
T  1605804 tgtattggattgagattttaaaatactgttttgatagaaaaaatcttgaagattttaaaagactttgcaggattgtattgattttgtgggattttaaaag 1605903  T
Q  187 ac 188  Q
    ||    
T  1605904 ac 1605905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 43489992 - 43489901
Alignment:
Q  96 ttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  43489992 ttgagattttaaaagacctttttgatagaaaaa-tcttgaagattttaaaagactttgttggattgtattgattttgtgggattttaaaagac 43489901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 103 - 233
Target Start/End: Original strand, 39371185 - 39371316
Alignment:
Q  103 tttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagacnnnnnnngaaagac 202  Q
    ||||||||||| ||||||||||||   | ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||       |||||||    
T  39371185 tttaaaagactgttttgatagaaatttttttgaagattttaaaagactttgttggattgtattgattttgtgggattttaaaagacttttttggaaagac 39371284  T
Q  203 -tttttacaatcaagattctttacaagatttt 233  Q
     |||||||||||||||||||||  ||||||||    
T  39371285 ttttttacaatcaagattctttgaaagatttt 39371316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 2113821 - 2113724
Alignment:
Q  136 agattttaaaagactttattgaattgtattaattttgtgggattttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||||||    
T  2113821 agattttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 2113724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 37566511 - 37566586
Alignment:
Q  73 aatactttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||  ||||||||||||| |||||||||||||||||| |||||| | ||||| |||||||||||||||||||    
T  37566511 aatacttaggggggtgtattggattgagattttaaaagactattttgacaaaaaaagtcttgaagattttaaaaga 37566586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 38805929 - 38806028
Alignment:
Q  88 gtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaaga 187  Q
    ||||||| |||||||||||||||||| ||||| |||||||| ||||  ||||||||||||||||| | | |||||||| ||| | || ||||||||||||    
T  38805929 gtattggattgagattttaaaagactattttggtagaaaaagtctttgagattttaaaagactttttaggattgtattgattctatgagattttaaaaga 38806028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 18957829 - 18957938
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    ||||||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||    
T  18957829 tttagggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgaga 18957928  T
Q  178 ttttaaaaga 187  Q
    ||||||||||    
T  18957929 ttttaaaaga 18957938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 30381822 - 30381887
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||||||| |||||||||||||||||| |||||| | ||||| |||||||||||||||||||    
T  30381822 ggggtgtattggattgagattttaaaagactattttgacaaaaaaagtcttgaagattttaaaaga 30381887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 39371484 - 39371536
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaatt 290  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  39371484 aaaaaagactattagataatatactactagcaggttgattgatcttgaaaatt 39371536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 35143174 - 35143067
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    ||||| |||||||| || ||||| ||||||||| |||||||| || |||||||  ||||||||||||||| | |   |||||||| |||||||| |||||    
T  35143174 aggggatgtattggattaagattgtaaaagactattttgataaaagaaatctttgagattttaaaagactctgtaagattgtattgattttgtgagattt 35143075  T
Q  181 taaaagac 188  Q
    ||||||||    
T  35143074 taaaagac 35143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 14781247 - 14781353
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  14781247 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 14781346  T
Q  182 aaaagac 188  Q
    |||||||    
T  14781347 aaaagac 14781353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 39466634 - 39466739
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| || ||||||||||||| | |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||    
T  39466634 ggggtgtattggattaagattttaaaagattattttaataaaaaaagtctttaagattttaaaagactctgtgatattgtattgattctgtgagatttta 39466733  T
Q  183 aaagac 188  Q
    ||||||    
T  39466734 aaagac 39466739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 16365374 - 16365266
Alignment:
Q  80 tagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    ||||||||||||||  ||  |||||||||||||  |||| ||| ||||| |||| |||||||||||||||||| |   |||||||| ||| |||| ||||    
T  16365374 tagggggtgtattgaattaggattttaaaagacaattttaataaaaaaagtctttaagattttaaaagactttgtgcgattgtattgattctgtgagatt 16365275  T
Q  180 ttaaaagac 188  Q
    |||||||||    
T  16365274 ttaaaagac 16365266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 32498990 - 32498918
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagact 150  Q
    ||||||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| ||||||||||||||||    
T  32498990 tttagggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagact 32498918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 44724898 - 44725002
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaa 183  Q
    ||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||||    
T  44724898 gggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 44724997  T
Q  184 aagac 188  Q
    |||||    
T  44724998 aagac 44725002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 18305076 - 18305182
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||  |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  18305076 gggggtgtattggattaggattttaaaagacaattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 18305175  T
Q  182 aaaagac 188  Q
    |||||||    
T  18305176 aaaagac 18305182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 17791651 - 17791590
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||| |||||||||||||||||| ||||||| |||||  |||| ||||||||||||||    
T  17791651 tgtattggattgagattttaaaagactattttgattgaaaatgtcttaaagattttaaaaga 17791590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 42304740 - 42304848
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa--tcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    |||| |||||||| ||  |||||||||||||| |||| ||| ||||||  |||| |||||||||||||||| | |   |||||||| |||||||| ||||    
T  42304740 ggggatgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattttgtgagatt 42304839  T
Q  180 ttaaaagac 188  Q
    |||||||||    
T  42304840 ttaaaagac 42304848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 41964650 - 41964702
Alignment:
Q  136 agattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    ||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||    
T  41964650 agattttaaaaaactttgttgaattatattgattttgtgggattttaaaagac 41964702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 10128354 - 10128287
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaa 145  Q
    ||||||||||||||||| |||||| ||||||||| | |||||||  ||||| |||| |||||||||||    
T  10128354 tttagggggtgtattggattgagaatttaaaagattattttgattaaaaaagtcttcaagattttaaa 10128287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 42366983 - 42366850
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| ||||||||||||| |||| |||||||||||    | ||||||||||||||| ||      | |||||||| |||||||| |||||||    
T  42366983 ggggtgtattggattgagattttaaatgactattttgatagaattttttttgaagattttaaaaaac------ggattgtatttattttgtgagatttta 42366890  T
Q  183 aaagacnnnnnnngaaagactttttacaatcaagattctt 222  Q
    |||||         ||||| ||||||||||||||||||||    
T  42366889 aaagatattttttaaaagattttttacaatcaagattctt 42366850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 4030443 - 4030549
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    |||||||||| | ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  4030443 ggggtgtattagattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 4030542  T
Q  182 aaaagac 188  Q
    |||||||    
T  4030543 aaaagac 4030549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 9209980 - 9209891
Alignment:
Q  99 agattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    ||||||||||||||| |||||  | | |||||| |||||||||||||||| ||| |   ||| |||| ||||||| ||||||||||||||    
T  9209980 agattttaaaagactattttggcaaacaaaatcctgaagattttaaaagattttgtgagattatattgattttgttggattttaaaagac 9209891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 19716978 - 19717086
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa--tcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    |||| |||||||| ||  |||||||||||||| |||| ||| ||||||  |||| |||||||||||||||| | |   |||||||| ||| |||| ||||    
T  19716978 ggggatgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatt 19717077  T
Q  180 ttaaaagac 188  Q
    |||||||||    
T  19717078 ttaaaagac 19717086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 37857971 - 37857867
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaat-cttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    |||||||||||| ||  |||||||||||||| |||| ||| ||||||  ||| ||||||||||||||||  ||   |||||||| ||| |||| ||||||    
T  37857971 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagactttaagattttaaaagact--atgagattgtattgattctgtgagatttt 37857874  T
Q  182 aaaagac 188  Q
    |||||||    
T  37857873 aaaagac 37857867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 28620770 - 28620665
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||  |||||||||| ||||| | |||||  | |||||||||| |||||||||||| | ||| |   |||||||| ||||| || ||||||    
T  28620770 gggggtgtattgaattgagattttgaaagattgttttggca-aaaaaatcttaaagattttaaaaaattttgtgtgattgtattgattttttgagatttt 28620672  T
Q  182 aaaagac 188  Q
    |||||||    
T  28620671 aaaagac 28620665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 43307661 - 43307759
Alignment:
Q  90 attgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    ||||| || ||||||||||||||| |||| ||| ||| | |||| |||||||||||||||| | |   |||| ||| ||| |||| |||||||||||||    
T  43307661 attggattaagattttaaaagactattttaataaaaagagtctttaagattttaaaagactgtgtgagattggattgattctgtgagattttaaaagac 43307759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 9287608 - 9287673
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagac 149  Q
    |||||||||| ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||||    
T  9287608 ggtgtattggattaggattttaaaagactattttaataaaaaaaaatctttaagattttaaaagac 9287673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 14062574 - 14062473
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaag 186  Q
    |||||||| ||  |||||||| ||| | |||||| | | |||||| || ||||||||||||||||| |   ||| |||| ||||| ||||||||||||||    
T  14062574 tgtattggattaggattttaagagattattttgaaaaacaaaatcctgcagattttaaaagactttgtgtgattctattgattttatgggattttaaaag 14062475  T
Q  187 ac 188  Q
    ||    
T  14062474 ac 14062473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 5266793 - 5266845
Alignment:
Q  135 aagattttaaaagactttattgaattgtattaattttgtgggattttaaaaga 187  Q
    |||||||||||||||||| |   ||| |||| |||||||||||||||||||||    
T  5266793 aagattttaaaagactttgtgagattatattgattttgtgggattttaaaaga 5266845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 41964697 - 41964733
Alignment:
Q  197 aaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  41964697 aaagactttttacaatcaagattgtttgcaagatttt 41964733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 43604479 - 43604511
Alignment:
Q  201 actttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||||||||||||||| |||||||||    
T  43604479 actttttacaatcaagattctttgcaagatttt 43604511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 152
Target Start/End: Complemental strand, 43960116 - 43960088
Alignment:
Q  124 aaaaaatcttgaagattttaaaagacttt 152  Q
    |||||||||||||||||||||||||||||    
T  43960116 aaaaaatcttgaagattttaaaagacttt 43960088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 3e-70; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 27417967 - 27418113
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  27417967 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 27418066  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27418067 agtttattgattataataatttgattgaaaaatgcatgttacaggta 27418113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 12252746 - 12252888
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  12252746 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctgaacatatgatatcaaaataaatagacctaaaaataagttatgtt 12252845  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12252846 agtttattgattataataatttgattgaaaaatgcatgttaca 12252888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 35089416 - 35089562
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35089416 aaaaaagactattagataatatactactagcagattgattaatcttaaaaattatggacatatgatatcaaaataaatagacctaaaaataagttatgtt 35089515  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    | |||||||||||||||||||||||||||||||||||||||||||||    
T  35089516 aatttattgattataataatttgattgaaaaatgcatgttacaggta 35089562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 43056987 - 43057129
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  43056987 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 43057086  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    | |||||||||||||||||||||||||||||||||||||||||    
T  43057087 aatttattgattataataatttgattgaaaaatgcatgttaca 43057129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 33475262 - 33475116
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| |    
T  33475262 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatccaaataaatagacctaaaaataagttatgat 33475163  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  33475162 agtttattgattataataatttgattgaaatatgcatgttacaggta 33475116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 47913011 - 47912865
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  47913011 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatataatatcaaaataaatagacctaaaaataagctatgtt 47912912  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    | |||||||||||||||||||||||||||||||||||||||||||||    
T  47912911 aatttattgattataataatttgattgaaaaatgcatgttacaggta 47912865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 47913642 - 47913788
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  47913642 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatataatatcaaaataaatagacctaaaaataagctatgtt 47913741  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    | |||||||||||||||||||||||||||||||||||||||||||||    
T  47913742 aatttattgattataataatttgattgaaaaatgcatgttacaggta 47913788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 238 - 380
Target Start/End: Complemental strand, 152630 - 152488
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  152630 aaaaaagactattagataatatactactagcagattgattaatcttaaaaatcatggacatatgatatcaaaataaatagatctaaaaataagttatgtt 152531  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  152530 agtttattgattataataatttgattgaaaaatgcatgttaca 152488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 30111560 - 30111419
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||     |||||||    
T  30111560 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaa-----ttatgtt 30111466  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30111465 agtttattgattataataatttgattgaaaaatgcatgttacaggta 30111419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 81 - 233
Target Start/End: Original strand, 12252384 - 12252536
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  12252384 agggggtgtattggattgagattttaaaagattgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggattt 12252483  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||       |||||||||||||||||||||||||||| ||| |||||    
T  12252484 taaaagactttttttgaaagactttttacaatcaagattctttgcaaaatttt 12252536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 30111881 - 30111729
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  30111881 agggggtgtattggattgagattttaaaagactattttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggattt 30111782  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||| ||        ||||||||||||||||||||||||||| |||||||||    
T  30111781 taaaaaactttttttcaaagactttttacaatcaagattctttccaagatttt 30111729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 81 - 233
Target Start/End: Original strand, 43056686 - 43056838
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  43056686 agggggtgtattgaattgagattttaaaagaatgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggattt 43056785  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||       |||||||||||||||||||||||||||| |||||||||    
T  43056786 taaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 43056838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 82 - 233
Target Start/End: Complemental strand, 152948 - 152797
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||    
T  152948 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtaggatttt 152849  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||| ||| |||||||||    
T  152848 aaaagactttttttgaaagactttttacaatcaagattgtttgcaagatttt 152797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 79 - 233
Target Start/End: Original strand, 27417644 - 27417798
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    |||||| ||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  27417644 ttagggtgtgtattggattgagattttaaaagagtattttgatagaaaaaatcttgaagattttaaaagactttgttagattgtattgattttgtgggat 27417743  T
Q  179 tttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||        ||||||||||||||||||||||||||| |||||||||    
T  27417744 tttaaaagactttttttcaaagactttttacaatcaagattctttgcaagatttt 27417798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 35089110 - 35089247
Alignment:
Q  96 ttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagacnnnnnnn 195  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||           
T  35089110 ttgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgagattttaaaagacttttttt 35089209  T
Q  196 gaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||||||||||||||||||||||| |||||||||    
T  35089210 gaaagactttttacaatcaagattctttgcaagatttt 35089247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 47912523 - 47912629
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    |||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  47912523 gggggtatattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 47912622  T
Q  182 aaaagac 188  Q
    |||||||    
T  47912623 aaaagac 47912629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 33475625 - 33475479
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||  ||||    
T  33475625 agggggtgtatttgattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgaaattt 33475526  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagattctttacaaga 229  Q
    ||||||||       |||||||  ||||||||||||||||||| |||||    
T  33475525 taaaagactttttttgaaagac--tttacaatcaagattctttgcaaga 33475479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 46143341 - 46143277
Alignment:
Q  17 aatattcttaaaaagaactaagttgatttcagattgttaattttgtttgattacaaaatacttta 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46143341 aatattcttaaaaagaactaagttgatttcggattgttaattttgtttgattacaaaatacttta 46143277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 34114536 - 34114646
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    ||||||||||||||||| ||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||||| |   |||||||| ||||||  |||    
T  34114536 tttagggggtgtattggattgggattttgaaagactgttttggcagaaaaaatcttaaagattttaaaagactttgtgtgattgtattgattttgaagga 34114635  T
Q  178 ttttaaaagac 188  Q
    |||||||||||    
T  34114636 ttttaaaagac 34114646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 28343405 - 28343299
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||| |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  28343405 gggggtgtattggattgggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 28343306  T
Q  182 aaaagac 188  Q
    |||||||    
T  28343305 aaaagac 28343299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 23102386 - 23102280
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  23102386 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 23102287  T
Q  182 aaaagac 188  Q
    |||||||    
T  23102286 aaaagac 23102280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 39300426 - 39300492
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaaga 148  Q
    |||||||||||| |||||||||||||||||| |||||| | |||||| |||||||||||||||||||    
T  39300426 ggggtgtattggattgagattttaaaagactattttgacaaaaaaaagtcttgaagattttaaaaga 39300492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 46197104 - 46197206
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||| | |||||| | | ||||| ||| |||||||||||||||||||  |||| |||| ||||| | | |||||    
T  46197104 gggggtgtattggattgagattttaaaagattgttttgacaaataaaatattggagattttaaaagactttatgaaattatattgattttatagaatttt 46197203  T
Q  182 aaa 184  Q
    |||    
T  46197204 aaa 46197206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 510743 - 510635
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa--tcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    ||||||||||||| ||| |||||||||||||| |||| ||| ||||||  |||| |||||||||||||||| | |   |||||||| ||| |||| ||||    
T  510743 gggggtgtattggattgggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatt 510644  T
Q  180 ttaaaagac 188  Q
    |||||||||    
T  510643 ttaaaagac 510635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 12741467 - 12741362
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    ||||||||||| || ||||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||    
T  12741467 gggtgtattggattaagattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattatgtgagatttta 12741368  T
Q  183 aaagac 188  Q
    ||||||    
T  12741367 aaagac 12741362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 46035435 - 46035555
Alignment:
Q  69 acaaaatactttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttg-aagattttaaaagactttattgaattgtattaa 167  Q
    |||||| | ||||||| ||||||||| ||  |||||||||||||| |||| | | ||||| | ||  |||||||||||||||||| | |||||||||| |    
T  46035435 acaaaagaatttagggtgtgtattggattaggattttaaaagactattttaacaaaaaaagttttttaagattttaaaagactttgtggaattgtattga 46035534  T
Q  168 ttttgtgggattttaaaagac 188  Q
    || |||| |||||||||||||    
T  46035535 ttctgtgagattttaaaagac 46035555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 29894056 - 29893945
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtggg 176  Q
    |||| |||||||||||| ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||| | | |   |||||||| |||||||| |    
T  29894056 tttatggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattttgtgag 29893957  T
Q  177 attttaaaagac 188  Q
    ||||||||||||    
T  29893956 attttaaaagac 29893945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 30889141 - 30889207
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactt 151  Q
    |||||||||| ||| |||||||||| ||| ||||| |||||||||||||  ||||||||||||||||    
T  30889141 ggtgtattggattgggattttaaaaaactgttttggtagaaaaaatctttgagattttaaaagactt 30889207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 42677250 - 42677352
Alignment:
Q  86 gtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaa 185  Q
    ||||||||| ||||||||||  |||| | |||||  | |||||||||| |||||||||||||| ||| |   |||||||| ||||||||| |||||||||    
T  42677250 gtgtattggattgagattttgcaagattgttttggcaaaaaaaatcttaaagattttaaaagattttgtgtgattgtattgattttgtggaattttaaaa 42677349  T
Q  186 gac 188  Q
    |||    
T  42677350 gac 42677352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 47032399 - 47032341
Alignment:
Q  90 attgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||| |||||||||||||||||| |||||||| | ||| |||||||||||||||||||    
T  47032399 attggattgagattttaaaagactattttgataaataaagtcttgaagattttaaaaga 47032341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 48136358 - 48136467
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    ||||||||| |||||| ||  |||||||||||||| |||| ||| |||||||||| |||||||||||| | | | |   |||||||| ||| |||| |||    
T  48136358 ttagggggtatattggattaggattttaaaagactattttaataaaaaaaatcttcaagattttaaaatattgtgtgagattgtattgattctgtgagat 48136457  T
Q  179 tttaaaagac 188  Q
    ||||||||||    
T  48136458 tttaaaagac 48136467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 29613906 - 29614010
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaa 183  Q
    |||||||||| ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||||    
T  29613906 ggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 29614005  T
Q  184 aagac 188  Q
    |||||    
T  29614006 aagac 29614010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 3024020 - 3023914
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||  |||||||||||||| |||| ||| ||||| | || |||||||||||||||| | |   |||||||| ||| |||| |||||    
T  3024020 agggggtgtattggattaggattttaaaagactattttaata-aaaaagtttttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 3023922  T
Q  181 taaaagac 188  Q
    ||||||||    
T  3023921 taaaagac 3023914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 30823682 - 30823580
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||  ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  30823682 gggggtgtattgaattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 30823583  T
Q  182 aaa 184  Q
    |||    
T  30823582 aaa 30823580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 37971509 - 37971611
Alignment:
Q  86 gtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaa 185  Q
    ||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||  | |   |||||||| ||| |||| ||||||||||    
T  37971509 gtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagaccgtgtgagattgtattgattctgtgagattttaaaa 37971608  T
Q  186 gac 188  Q
    |||    
T  37971609 gac 37971611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 18839388 - 18839283
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| ||  |||||||||||| | |||| ||| ||||| |||| |||||||||||||| | | |   |||||||| ||| |||| |||||||    
T  18839388 ggggtgtattggattaggattttaaaagattattttaataaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattctgtgagatttta 18839289  T
Q  183 aaagac 188  Q
    ||||||    
T  18839288 aaagac 18839283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 36354665 - 36354716
Alignment:
Q  96 ttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||||||||||||| |||||||| ||||| || ||||||||||||||||    
T  36354665 ttgagattttaaaagactattttgata-aaaaagtcatgaagattttaaaaga 36354716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 39785193 - 39785123
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa--tcttgaagattttaaaagact 150  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||||  |||| ||||||||||||||||    
T  39785193 gggggtgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagact 39785123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 9881400 - 9881505
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||  |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| | || ||||||    
T  9881400 gggggtgtattggattaggattttaaaagacaattttaata-aaaaattctttaagattttaaaagactgtgtgagattgtattgattctatgagatttt 9881498  T
Q  182 aaaagac 188  Q
    |||||||    
T  9881499 aaaagac 9881505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 32631612 - 32631550
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaa 146  Q
    ||||||||||| |||||||||| ||||||| |||||  | ||||| || ||||||||||||||    
T  32631612 gggtgtattggattgagattttgaaagactattttggcaaaaaaagtcatgaagattttaaaa 32631550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 21068459 - 21068406
Alignment:
Q  76 actttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa 129  Q
    ||||||||||||||||||| ||  |||||||||||||| |||| ||| ||||||    
T  21068459 actttagggggtgtattggattaggattttaaaagactattttaataaaaaaaa 21068406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 32884850 - 32884742
Alignment:
Q  86 gtgtattgggttgagattttaaaagactcttttgatagaaaaaa------tcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    ||||||||| || ||||||||||||||| |||| |||  |||||      |||| |||||||||||||||| | |  ||||||||| ||| |||| ||||    
T  32884850 gtgtattggattaagattttaaaagactattttaataataaaaaaaaaagtctttaagattttaaaagactgtgtgaaattgtattgattctgtgagatt 32884751  T
Q  180 ttaaaagac 188  Q
    |||||||||    
T  32884750 ttaaaagac 32884742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 40459832 - 40459901
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagact 150  Q
    ||||||||||||| ||   ||||||||||||| |||| ||| |||||| |||| ||||||||||||||||    
T  40459832 gggggtgtattggattagaattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 40459901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 3e-70; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 26556627 - 26556481
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  26556627 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 26556528  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26556527 agtttattgattataataatttgattgaaaaatgcatgttataggta 26556481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 36054329 - 36054475
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  36054329 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 36054428  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36054429 agtttattgattataataatttgattgaaaaatgcatgttacaggta 36054475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 238 - 380
Target Start/End: Complemental strand, 30589613 - 30589471
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  30589613 aaaaaagactattagataataaactactagcagattgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 30589514  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30589513 agtttattgattataataatttgattgaaaaatgcatgttaca 30589471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 38629129 - 38629271
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  38629129 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 38629228  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38629229 agtttattgattataataatttgattgaaaaatgcatgttaca 38629271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 24150145 - 24150291
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||    
T  24150145 aaaaaagactattagataatatactactagcagattgattgatcttaaaatttttggacatatgatatcaaaataaatagacctaaaaataagttatgtt 24150244  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24150245 agtttattgattataataatttgattgaaaaatgcatgttacaggta 24150291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 26292881 - 26293027
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||||    
T  26292881 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgctatcaaaataaatacacctaaaaataagttatgtt 26292980  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26292981 agtttattgattataataatttgattgaaaaatgcatgttacaggta 26293027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 35731643 - 35731497
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  35731643 aaaaaagactattagataaaatactactagcaggttgattgatcttaaaaattctggacatataatatcaaaataaatagacctaaaaataagttatgtt 35731544  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35731543 agtttattgattataataatttgattgaaaaatgcatgttacaggta 35731497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 50899742 - 50899888
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  50899742 aaaaaaaactattagataatatactactagcaggttaattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 50899841  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  50899842 agtttattgattataataatttgattgaaaaatgcatgttacaggta 50899888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 2125016 - 2125162
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  2125016 aaaaaagactattagataatatactactagcatgttgattgatcttaaaaattctggacatatgatataaaaataaatagacctaaaaataagttatgtt 2125115  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  2125116 agtttattgattataataatttgattaaaaaatgcatgttacaggta 2125162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 19551475 - 19551621
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    |||||||||| |||||||||| || |||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  19551475 aaaaaagactgttagataatataccactagcaggttgattgatcttaaaaattctgaacatatgatatcaaaataaatagacctaaaaataagttatgtt 19551574  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  19551575 agtttattgattataataatttgattcaaaaatgcatgttacaggta 19551621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 26005172 - 26005317
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||    
T  26005172 aaaaaagactattagataatta-ctactagcaggttgattgatcttaaaaattatggacatatgatatcaaaataaataaaccaaaaattaagttatgtt 26005270  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26005271 agtttattgattataataatttgattgaaaaatgcatgttacaggta 26005317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 82 - 233
Target Start/End: Complemental strand, 30589932 - 30589781
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  30589932 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 30589833  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||||||| |||||||||    
T  30589832 aaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 30589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 36054009 - 36054160
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  36054009 gggggtgtattggattgagattttaaaagactattttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 36054108  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||        ||||||||||||||||||||||||||| |||||||||    
T  36054109 aaaagactttttttcaaagactttttacaatcaagattctttgcaagatttt 36054160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 38628820 - 38628959
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  38628820 ggggtgtattggattgagattttaaaagactcttttgatagaaaaaatcttgaaaattttaaaagactttgttgaattgtattgattttgtgggatttta 38628919  T
Q  183 aaagacnnnnnnngaaagactttttacaatcaagattctt 222  Q
    ||||||       |||||||||||||||||||||||||||    
T  38628920 aaagactttttttgaaagactttttacaatcaagattctt 38628959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 2124704 - 2124855
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||| |||||||| |||||||||||||||    
T  2124704 gggggtgtattggattgagattttaaaagactgttttgataaaaaaaatcttgaaaattttaaaagactttgttggattgtattgattttgtgggatttt 2124803  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||||||| |||||||||    
T  2124804 aaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 2124855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 24149832 - 24149987
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||| ||| |||| |||||||||||    
T  24149832 tttagggggtgtattggattaagattttaaaagactattttgatagaaaaaatcttgaagattttaaatgactttgttggattatattgattttgtggga 24149931  T
Q  178 ttttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||||||       |||||||||||||||||||||||||||| |||||||||    
T  24149932 ttttaaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 24149987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 79 - 233
Target Start/End: Original strand, 46223302 - 46223456
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    ||||| |||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  46223302 ttaggaggtgtattgaattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggat 46223401  T
Q  179 tttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||        ||||| ||||||||||||||||||||| |||||||||    
T  46223402 tttaaaagactttttttaaaagattttttacaatcaagattctttccaagatttt 46223456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 82 - 233
Target Start/End: Complemental strand, 26556954 - 26556803
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||  |||||||| |||||||||||||||    
T  26556954 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttaaagattttaaaagactttgttcgattgtattgattttgtgggatttt 26556855  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||| ||| ||||||||||||| |||||||||    
T  26556854 aaaagactttttttgaaagactttctacgatcaagattctttgcaagatttt 26556803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 233
Target Start/End: Original strand, 26292560 - 26292712
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||| ||    
T  26292560 ttagggggtgtattggattgagattttaaaagactgttttgatagaaaatatcttgaagattttaaaagactttgttggattgtatt-attttgtggaat 26292658  T
Q  179 tttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||        ||||||||||||||||||||||||||| |||||||||    
T  26292659 tttaaaagacttttttt-aaagactttttacaatcaagattctttgcaagatttt 26292712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 26004847 - 26004999
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| |||| || ||||||| ||| ||| |||||||||||| ||||||||||||||    
T  26004847 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaaatcttaaatattttaagagagtttgttgaattgtattgattttgtgggattt 26004946  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||       |||||||||||||||||||||||||||| |||||||||    
T  26004947 taaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 26004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 23754280 - 23754180
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  23754280 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattatgaacatatgatatcaaaataaatagacctaaaaataaattatgtt 23754181  T
Q  338 a 338  Q
    |    
T  23754180 a 23754180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 50899470 - 50899596
Alignment:
Q  107 aaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagacnnnnnnngaaagactttt 206  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||       |||||||||||    
T  50899470 aaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtcggattttaaaagactttttttgaaagactttt 50899569  T
Q  207 tacaatcaagattctttacaagatttt 233  Q
    ||||||||||||||||| |||||||||    
T  50899570 tacaatcaagattctttgcaagatttt 50899596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 23360663 - 23360558
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  23360663 ggggtgtattggattgagattctaaaagactgttttgatataaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttta 23360564  T
Q  183 aaagac 188  Q
    ||||||    
T  23360563 aaagac 23360558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 23367503 - 23367398
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  23367503 ggggtgtattggattgagattctaaaagactgttttgatataaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttta 23367404  T
Q  183 aaagac 188  Q
    ||||||    
T  23367403 aaagac 23367398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 23697712 - 23697604
Alignment:
Q  231 tttcttca-aaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataa 329  Q
    |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  23697712 tttcttcagaaaaagactattagataatatactactagcatgttgattgatcttaaaaattctgaacatatgatatcaaaataaatagacctaaaaataa 23697613  T
Q  330 gttatgtta 338  Q
     ||||||||    
T  23697612 attatgtta 23697604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 23716168 - 23716060
Alignment:
Q  231 tttcttca-aaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataa 329  Q
    |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  23716168 tttcttcagaaaaagactattagataatatactactagcatgttgattgatcttaaaaattctgaacatatgatatcaaaataaatagacctaaaaataa 23716069  T
Q  330 gttatgtta 338  Q
     ||||||||    
T  23716068 attatgtta 23716060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 23734624 - 23734516
Alignment:
Q  231 tttcttca-aaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataa 329  Q
    |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  23734624 tttcttcagaaaaagactattagataatatactactagcatgttgattgatcttaaaaattctgaacatatgatatcaaaataaatagacctaaaaataa 23734525  T
Q  330 gttatgtta 338  Q
     ||||||||    
T  23734524 attatgtta 23734516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 19551153 - 19551303
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaatctt-gaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    ||||||||||| |||||||||||||||||| ||||||||||     | || ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  19551153 gggtgtattggattgagattttaaaagactgttttgatagagtttttttttgaagattttaaaagactttattggattgtattgattttgtgggatttta 19551252  T
Q  183 aaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||         ||||||||||||||||||||||||||| |||||||||    
T  19551253 aaagattttttttaaaagactttttacaatcaagattctttgcaagatttt 19551303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 23698060 - 23697907
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaa-aaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    |||||||||||||| |||||||||||||| | | |||||||||||   | | ||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  23698060 agggggtgtattggattgagattttaaaacattgttttgatagaatttatttttgaagattttaaaagactttgttggattgtattgattttgtgggatt 23697961  T
Q  180 ttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    | |||||||        ||||||||||||||||||||||| ||| |||||||||    
T  23697960 tcaaaagactttttttaaaagactttttacaatcaagattatttgcaagatttt 23697907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 23716515 - 23716362
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaa-aaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    |||||||||||||| |||||||||||||| | | |||||||||||   | | ||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  23716515 agggggtgtattggattgagattttaaaacattgttttgatagaatttatttttgaagattttaaaagactttgttggattgtattgattttgtgggatt 23716416  T
Q  180 ttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    | |||||||        ||||||||||||||||||||||| ||| |||||||||    
T  23716415 tcaaaagactttttttaaaagactttttacaatcaagattatttgcaagatttt 23716362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 23734971 - 23734818
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaa-aaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    |||||||||||||| |||||||||||||| | | |||||||||||   | | ||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  23734971 agggggtgtattggattgagattttaaaacattgttttgatagaatttatttttgaagattttaaaagactttgttggattgtattgattttgtgggatt 23734872  T
Q  180 ttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    | |||||||        ||||||||||||||||||||||| ||| |||||||||    
T  23734871 tcaaaagactttttttaaaagactttttacaatcaagattatttgcaagatttt 23734818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 23754582 - 23754481
Alignment:
Q  132 ttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatt 231  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||| |||| ||       | ||||||||||||||||||| ||||||||||||||    
T  23754582 ttgaagattttaaaagactttgttggattgtattgattttgtgggatttcaaaatactttttttggaagactttttacaatcaaggttctttacaagatt 23754483  T
Q  232 tt 233  Q
    ||    
T  23754482 tt 23754481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 35731939 - 35731872
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagacttt 152  Q
    |||||||||| |||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||    
T  35731939 ggtgtattggattgagattttaacagattgttttgatagaaaaaatcttgaagattttaaaagacttt 35731872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 45214086 - 45214220
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaa 184  Q
    |||||||||| |||||||||| ||||| | |||||  | |||||||||| |||||||||||||||||| |   |||||||| |||||||| |||||||||    
T  45214086 ggtgtattggattgagattttgaaagattgttttggcaaaaaaaatcttaaagattttaaaagactttgtgtgattgtattgattttgtgagattttaaa 45214185  T
Q  185 agacnnnnnnngaaagactttttacaatcaagatt 219  Q
    ||||        |||| ||||||||||||||||||    
T  45214186 agactttatttaaaaggctttttacaatcaagatt 45214220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 33417153 - 33417080
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttat 154  Q
    |||| ||||||||| |||||||||||||||||| ||||||| |||||| ||||||| ||||||||||| |||||    
T  33417153 agggagtgtattggattgagattttaaaagactattttgattgaaaaagtcttgaaaattttaaaagattttat 33417080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 45254552 - 45254660
Alignment:
Q  80 tagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    ||||||||||||| | ||  |||||||||||||| |||| ||| |||||||||| |||||||||||||||| | |   |||||||| ||| |||| ||||    
T  45254552 tagggggtgtattagattaggattttaaaagactattttaataaaaaaaatctttaagattttaaaagactgtgtgagattgtattgattctgtgagatt 45254651  T
Q  180 ttaaaagac 188  Q
    |||||||||    
T  45254652 ttaaaagac 45254660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 24573431 - 24573538
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||| |||||||||||| | |||||  | | |||||| |||||||||||||||||||| |  |||| |||||||||||  ||||||    
T  24573431 agggggtgtattggattgggattttaaaagattattttggcaaacaaaatcctgaagattttaaaagactttgtgaaattatattaattttgatggattt 24573530  T
Q  181 taaaagac 188  Q
    || |||||    
T  24573531 tagaagac 24573538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 31645362 - 31645469
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| || ||||||||||||||  |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||    
T  31645362 agggggtgtattggattaagattttaaaagacaattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 31645461  T
Q  181 taaaagac 188  Q
    ||||||||    
T  31645462 taaaagac 31645469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 11432646 - 11432536
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    ||||||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| || ||||||||||||| | |   |||||||| ||| |||| ||    
T  11432646 tttagggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaaaattttaaaagactgtgtgagattgtattgattctgtgaga 11432547  T
Q  178 ttttaaaagac 188  Q
    |||||||||||    
T  11432546 ttttaaaagac 11432536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 27594033 - 27593967
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaaga 148  Q
    |||||||||||| |||||||||||||||||| |||||| | |||||| |||||||||||||||||||    
T  27594033 ggggtgtattggattgagattttaaaagactattttgacaaaaaaaagtcttgaagattttaaaaga 27593967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 36673259 - 36673365
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  36673259 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 36673358  T
Q  182 aaaagac 188  Q
    |||||||    
T  36673359 aaaagac 36673365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 52617086 - 52617192
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||  |||| ||| ||||| |||| |||||||||||||||||| |   |||||||| ||| |||| ||||||    
T  52617086 gggggtgtattggattaggattttaaaagacaattttaataaaaaaagtctttaagattttaaaagactttgtgagattgtattgattctgtgagatttt 52617185  T
Q  182 aaaagac 188  Q
    |||||||    
T  52617186 aaaagac 52617192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 28845721 - 28845650
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa--tcttgaagattttaaaag 147  Q
    ||||||||||||||||| ||||| |||||||||||| |||||| | ||||||  ||||||||||||||||||    
T  28845721 tttagggggtgtattggattgaggttttaaaagactattttgacaaaaaaaaagtcttgaagattttaaaag 28845650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 34290167 - 34290272
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| ||| ||||| |||||| | |||||  | | |||||| || ||||||||||||||||| |   |||||||| ||||| ||||||||||    
T  34290167 ggggtgtattggattgggatttcaaaagattattttggcaaataaaatcctgcagattttaaaagactttgtgtgattgtattgattttatgggatttta 34290266  T
Q  183 aaagac 188  Q
    ||||||    
T  34290267 aaagac 34290272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 44904961 - 44905062
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaag 186  Q
    |||||||| || ||||||||||||||| |||| ||| ||||  |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||||||    
T  44904961 tgtattggattaagattttaaaagactattttaataaaaaaggtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaag 44905060  T
Q  187 ac 188  Q
    ||    
T  44905061 ac 44905062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 50902417 - 50902527
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa----tcttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    ||||||||||||| || ||||||||||||||| |||| ||| ||||||    |||| |||||||||||||||| | |   |||||||| ||| |||| ||    
T  50902417 gggggtgtattggattaagattttaaaagactattttaataaaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgaga 50902516  T
Q  178 ttttaaaagac 188  Q
    |||||||||||    
T  50902517 ttttaaaagac 50902527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 6783189 - 6783247
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgat-agaaaaaatcttgaagattt 141  Q
    ||||||||||| |||| ||||||||||||| ||||||| | ||||||||||||||||||    
T  6783189 gggtgtattggattgaaattttaaaagactattttgataaaaaaaaatcttgaagattt 6783247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 10728123 - 10728232
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa--tcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    |||||||||||||| ||  |||||||||||||| |||| ||| ||||||  |||| |||||||||||||| | | |   |||||||| ||| |||| |||    
T  10728123 agggggtgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagaatgtgtgagattgtattgattctgtgagat 10728222  T
Q  179 tttaaaagac 188  Q
    ||||||||||    
T  10728223 tttaaaagac 10728232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 18750730 - 18750622
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa--tcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    ||||||||||||  ||  |||||||||||||| |||| ||| ||||||  |||| |||||||||||||||| | |   |||||||| ||| |||| ||||    
T  18750730 gggggtgtattgaattaggattttaaaagactattttaataaaaaaaaaatctttaagattttaaaagactgtgtgagattgtattgattctgtgagatt 18750631  T
Q  180 ttaaaagac 188  Q
    |||||||||    
T  18750630 ttaaaagac 18750622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 23752520 - 23752609
Alignment:
Q  100 gattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||||||||    
T  23752520 gattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagac 23752609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 44708035 - 44707962
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagacttt 152  Q
    ||||||| |||||||  ||  |||||||||||| | |||| ||| |||||||||| ||||||||||||||||||    
T  44708035 ttaggggatgtattgaattatgattttaaaagattattttaataaaaaaaatctttaagattttaaaagacttt 44707962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 33417061 - 33416998
Alignment:
Q  97 tgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgta 163  Q
    ||||||||||||||| |   ||||| |||||||||||||||||||||||||| ||||| | ||||||    
T  33417061 tgagattttaaaagaat---ttgattgaaaaaatcttgaagattttaaaagattttataggattgta 33416998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 20833990 - 20833927
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||||| ||  |||||||||||||| |||| ||| ||||| |||| ||||||||||||||    
T  20833990 ggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaaga 20833927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 43152114 - 43152051
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||||| |||||||||||||||||| ||||   | | ||| |||||||||||||||||||    
T  43152114 ggtgtattggattgagattttaaaagactattttagcaaacaaagtcttgaagattttaaaaga 43152051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 35347085 - 35347159
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagacttt 152  Q
    ||||||||||||||| | |||||||||||  ||||| |||||  | |  ||||| ||||||||||||||||||||    
T  35347085 tttagggggtgtatttgattgagattttatcagactattttggcaaactaaatcctgaagattttaaaagacttt 35347159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 17947316 - 17947207
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgat-agaaaaaatc-ttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    |||||||||||||| ||  |||||||||||||| |||| || | |||||||| || || ||||||||||||| | |   |||||||| ||| |||| |||    
T  17947316 agggggtgtattggattaggattttaaaagactattttaataaaaaaaaatcttttaaaattttaaaagactatgtgagattgtattgattctgtgagat 17947217  T
Q  179 tttaaaagac 188  Q
    ||||||||||    
T  17947216 tttaaaagac 17947207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 35731847 - 35731810
Alignment:
Q  196 gaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  35731847 gaaagactttttacgatcaagattctttgcaagatttt 35731810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 40898144 - 40898095
Alignment:
Q  101 attttaaaagactcttttgatagaaaaaatcttgaagattttaaaagact 150  Q
    ||||||||||||| |||| ||| ||||| |||| ||||||||||||||||    
T  40898144 attttaaaagactattttaataaaaaaagtctttaagattttaaaagact 40898095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 27239326 - 27239393
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagact 150  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||||  || ||||||||||||||||    
T  27239326 gggggtgtattggattaggattttaaaagactattttaata-aaaaaagttttaagattttaaaagact 27239393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 34483246 - 34483310
Alignment:
Q  124 aaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||| |||||||||||||||| | |   |||||||| ||| |||| |||||||||||||    
T  34483246 aaaaaatctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagac 34483310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 50761222 - 50761329
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa--tcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||| ||  ||| |||||||||| |||| ||| ||||||  |||| |||||||||||||| | | |   |||||||| ||| |||| |||||    
T  50761222 ggggtgtattggattaggatattaaaagactattttaataaaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattctgtgagattt 50761321  T
Q  181 taaaagac 188  Q
    ||||||||    
T  50761322 taaaagac 50761329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 52706163 - 52706017
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  52706163 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 52706064  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  52706063 agtttattgattataataatttgattgaaaaatgcatgttataggta 52706017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 14389156 - 14389010
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  14389156 aaaaaagactattagataatatactactagtaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 14389057  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14389056 agtttattgattataataatttgattgaaaaatgcatgttacaggta 14389010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 26882135 - 26882281
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  26882135 aaaaaagactattagataatatcctactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 26882234  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  26882235 agtttcttgattataataatttgattgaaaaatgcatgttacaggta 26882281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Complemental strand, 45319239 - 45319093
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  45319239 aaaaaagactattagataataaactactagcaaattgattgatcttaaaaattctggacatatgatatcaaaataaatacacctaaaaataagttatgtt 45319140  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  45319139 agtttattgattataataatttgattgaaaaatgcatgttacaggta 45319093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 238 - 383
Target Start/End: Complemental strand, 45535531 - 45535388
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  45535531 aaaaaagactattagataata--ctactagcaggttgattgatcttaaaaattctagacatatgatatcaaaataaatagacctaaaaataagttatgtt 45535434  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggt 383  Q
    | ||||||||||||||||||||||||||||||||||||||||||||    
T  45535433 aatttattgattataataatttgattgaaaaatgcatgttacaggt 45535388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 78 - 223
Target Start/End: Complemental strand, 52706479 - 52706334
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  52706479 tttagggggtgtattggattgagattttaaaagaatgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtggga 52706380  T
Q  178 ttttaaaagacnnnnnnngaaagactttttacaatcaagattcttt 223  Q
    |||||||||||       |||||| |||||||||||||||||||||    
T  52706379 ttttaaaagactttttttgaaagattttttacaatcaagattcttt 52706334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 26881820 - 26881966
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaag 186  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||| ||| |||||||| ||||||||||||||||||||    
T  26881820 tgtattggattgagattttaaaagactattttgatagaaaaaatcttaaagattttagaagactttgttggattgtattgattttgtgggattttaaaag 26881919  T
Q  187 acnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |        |||||||||||||||||||||||||||| |||||||||    
T  26881920 attttttttgaaagactttttacaatcaagattctttgcaagatttt 26881966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 45535840 - 45535692
Alignment:
Q  86 gtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaa 185  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||| |||||||| |||||||||||||||||||    
T  45535840 gtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttagaagattttgttggattgtattgattttgtgggattttaaaa 45535741  T
Q  186 gac-nnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||        |||||||||||||||||||||||||||| |||||||||    
T  45535740 gacttttttttgaaagactttttacaatcaagattctttgcaagatttt 45535692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 79 - 233
Target Start/End: Complemental strand, 14389512 - 14389359
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||   | ||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  14389512 ttagggggtgtattggattgagattttaaaagactgttttgatagaaatttttttgaagattttaaaagactttgttggattgtattgattttgtgggat 14389413  T
Q  179 tttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||        ||||||||||||||||||||||||||| |||||||||    
T  14389412 tttaaaagactttttta-aaagactttttacaatcaagattctttgcaagatttt 14389359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 45319563 - 45319411
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| |||||||    
T  45319563 agggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgcgggattt 45319464  T
Q  181 taaaagac-nnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||        ||||||| |||||||||||| ||||||| |||||||||    
T  45319463 taaaagacttttttttgaaagac-ttttacaatcaaaattctttgcaagatttt 45319411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 188
Target Start/End: Complemental strand, 39758950 - 39758864
Alignment:
Q  102 ttttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  39758950 ttttaaaaaactattttgatagaaaaaatcttgcagattttaaaagactttgttggattgtattgattttgtgggattttaaaagac 39758864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 188
Target Start/End: Complemental strand, 39764304 - 39764218
Alignment:
Q  102 ttttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  39764304 ttttaaaaaactattttgatagaaaaaatcttgcagattttaaaagactttgttggattgtattgattttgtgggattttaaaagac 39764218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 39758628 - 39758503
Alignment:
Q  260 actactagcaggttgattgatcttaaaaa--ttatgggcatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattata 352  Q
    |||||||||||||||  | ||||||||||  ||||||||||||||||||||||||||||||| |     |||||||||||||||| || |||| ||||||    
T  39758628 actactagcaggttgcctcatcttaaaaaaattatgggcatatgatatcaaaataaatagacatgcattaaaataagttatgttaagtctattcattata 39758529  T
Q  353 ataatttgattgaaaaatgcatgtta 378  Q
    ||||||||||||||||||||||||||    
T  39758528 ataatttgattgaaaaatgcatgtta 39758503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 39763982 - 39763857
Alignment:
Q  260 actactagcaggttgattgatcttaaaaa--ttatgggcatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattata 352  Q
    |||||||||||||||  | ||||||||||  ||||||||||||||||||||||||||||||| |     |||||||||||||||| || |||| ||||||    
T  39763982 actactagcaggttgcctcatcttaaaaaaattatgggcatatgatatcaaaataaatagacatgcattaaaataagttatgttaagtctattcattata 39763883  T
Q  353 ataatttgattgaaaaatgcatgtta 378  Q
    ||||||||||||||||||||||||||    
T  39763882 ataatttgattgaaaaatgcatgtta 39763857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 10897732 - 10897662
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaaga 148  Q
    |||||||||||||||| |||||||||||||||||| |||||| | |||||| |||||||||||||||||||    
T  10897732 ttagggggtgtattggattgagattttaaaagactattttgagaaaaaaaagtcttgaagattttaaaaga 10897662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 36403171 - 36403105
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||||||||||| |||||||||||||||||| |||||| | ||||| |||||||||||||||||||    
T  36403171 gggggtgtattggattgagattttaaaagactattttgacaaaaaaagtcttgaagattttaaaaga 36403105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 48199042 - 48198936
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| | | ||||| |||| |||||||||||||||||| | | |||||||| ||| |||| ||||||    
T  48199042 gggggtgtattggattaggattttaaaagacttttttaacaaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtgagatttt 48198943  T
Q  182 aaaagac 188  Q
    |||||||    
T  48198942 aaaagac 48198936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 48207625 - 48207519
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| | | ||||| |||| |||||||||||||||||| | | |||||||| ||| |||| ||||||    
T  48207625 gggggtgtattggattaggattttaaaagacttttttaacaaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtgagatttt 48207526  T
Q  182 aaaagac 188  Q
    |||||||    
T  48207525 aaaagac 48207519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 51825957 - 51826066
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    ||||||| |||||||| |||||| ||| ||||| | |||||  | |||||||||| |||||||||||||||||| |   |||||||| ||||||||| ||    
T  51825957 ttaggggttgtattggattgagagtttgaaagattgttttggcaaaaaaaatcttaaagattttaaaagactttgtgtgattgtattgattttgtggcat 51826056  T
Q  179 tttaaaagac 188  Q
    ||||||||||    
T  51826057 tttaaaagac 51826066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 29395536 - 29395643
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||    
T  29395536 agggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 29395635  T
Q  181 taaaagac 188  Q
    ||||||||    
T  29395636 taaaagac 29395643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 6313671 - 6313565
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  6313671 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 6313572  T
Q  182 aaaagac 188  Q
    |||||||    
T  6313571 aaaagac 6313565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 25613187 - 25613081
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  25613187 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 25613088  T
Q  182 aaaagac 188  Q
    |||||||    
T  25613087 aaaagac 25613081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 20111678 - 20111787
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    |||||||||||||| | ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||||| |   |||||| | ||| |||| |||    
T  20111678 ttagggggtgtatttgattacgattttaaaagactattttaataaaaaaagtctttaagattttaaaagactttgtgagattgtactgattctgtgagat 20111777  T
Q  179 tttaaaagac 188  Q
    ||||||||||    
T  20111778 tttaaaagac 20111787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 9321618 - 9321725
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    ||||||||||||  ||| |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||    
T  9321618 gggggtgtattgaattgggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 9321717  T
Q  181 taaaagac 188  Q
    ||||||||    
T  9321718 taaaagac 9321725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 28386557 - 28386664
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   ||| |||| |||||||| |||||    
T  28386557 gggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattctattgattttgtgagattt 28386656  T
Q  181 taaaagac 188  Q
    ||||||||    
T  28386657 taaaagac 28386664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 51702690 - 51702583
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    ||||||||||| || ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||    
T  51702690 agggggtgtataggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 51702591  T
Q  181 taaaagac 188  Q
    ||||||||    
T  51702590 taaaagac 51702583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 1923373 - 1923474
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaag 186  Q
    |||||||| |||||||||||||||| | |||||  | | ||||||||||||||||||||||| ||| |   ||| |||| | ||||| ||||||||||||    
T  1923373 tgtattggattgagattttaaaagattattttggcaaacaaaatcttgaagattttaaaagattttgtgagattatattgactttgttggattttaaaag 1923472  T
Q  187 ac 188  Q
    ||    
T  1923473 ac 1923474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 33242460 - 33242524
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaa 145  Q
    ||||||||||||  |||||||||||||||||| |||||| | |||||| ||||||||||||||||    
T  33242460 gggggtgtattgcattgagattttaaaagactattttgacaaaaaaaagtcttgaagattttaaa 33242524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 9174975 - 9174908
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||| |||||| | |||||||||||||||||| |||| | | ||||| |||||||||||||||||||    
T  9174975 aggggatgtatttgattgagattttaaaagactattttaacaaaaaaagtcttgaagattttaaaaga 9174908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 9832804 - 9832738
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||||||| | ||||||||||||||||||  ||||| | ||||| |||||||||||||||||||    
T  9832804 agggggtgtattagattgagattttaaaagact-atttgacaaaaaaagtcttgaagattttaaaaga 9832738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 27650384 - 27650317
Alignment:
Q  14 aagaatattcttaaaaagaactaagttgatttcagattgttaattttgtttgattacaaaatacttta 81  Q
    |||||||| ||||||||||||  ||||||||||| |||||||||| | || ||| |||||||||||||    
T  27650384 aagaatatgcttaaaaagaaccgagttgatttcaaattgttaattatattcgatcacaaaatacttta 27650317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 49232078 - 49231976
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| ||  |||||||||||||  |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||    
T  49232078 ggggtgtattggattaggattttaaaagacaattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttta 49231979  T
Q  183 aaa 185  Q
    |||    
T  49231978 aaa 49231976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 45273659 - 45273550
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    ||||| |||||||||| ||  |||||||||||| | |||| ||| ||||| | || |||||||||||||||| |||   ||| |||| ||||| || |||    
T  45273659 ttaggaggtgtattggattaggattttaaaagattattttaataaaaaaagtttttaagattttaaaagactatatgagattatattgattttatgagat 45273560  T
Q  179 tttaaaagac 188  Q
    ||||||||||    
T  45273559 tttaaaagac 45273550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 43556777 - 43556672
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatctt-gaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||| |||||||| |||||||| | ||||||| |||||  | | |||||||  |||||||||||||||||| ||   |||||||  ||||||||||||||    
T  43556777 ggggatgtattggattgagattgtgaaagactattttggcaaataaaatctcagaagattttaaaagacttcataagattgtat--attttgtgggattt 43556680  T
Q  181 taaaagac 188  Q
    ||||||||    
T  43556679 taaaagac 43556672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 8139971 - 8140042
Alignment:
Q  78 tttagggg-gtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||| ||||||||| || | ||||||||||||| |||| ||| |||| ||||| ||||||||||||||    
T  8139971 tttaggggagtgtattggattaaaattttaaaagactattttaatataaaatatctttaagattttaaaaga 8140042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 44302635 - 44302570
Alignment:
Q  16 gaatattcttaaaaagaactaagttgatttcagattgttaattttgtttgattacaaaatacttta 81  Q
    |||||| |||||||||||  |||||||||||  |||||||||| | |||||| | |||||||||||    
T  44302635 gaatatgcttaaaaagaatcaagttgatttcgtattgttaattctatttgataaaaaaatacttta 44302570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 29220191 - 29220101
Alignment:
Q  101 attttaaaagactcttttgatagaaaaaa---tcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    ||||||||||||| |||| ||| ||||||   |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||||||||    
T  29220191 attttaaaagactattttaataaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagac 29220101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 8e-68; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 11633004 - 11633146
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  11633004 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 11633103  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11633104 agtttattgattataataatttgattgaaaaatgcatgttaca 11633146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 3603784 - 3603931
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaa-ttatgggcatatgatatcaaaataaatagacctaaaaataagttatgt 336  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| || | | |||||||||||||||||||||||||||||||||||||||||    
T  3603784 aaaaaagactattagataatgtactactagcaggttgattgatcttaaaaaattctagacatatgatatcaaaataaatagacctaaaaataagttatgt 3603883  T
Q  337 tagtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3603884 tagtttattgattataataatttgatttaaaaatgcatgttacaggta 3603931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 13950110 - 13950255
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    |||||| || |||||||||||  |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |||    
T  13950110 aaaaaaaaccattagataatatgctactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacct-aaaataagttacgtt 13950208  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13950209 agtttattgattataataatttgattgaaaaatgcatgttacaggta 13950255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 40411509 - 40411353
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtggg 176  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  40411509 tttagggggtgtattggattgagattttaaaagactgttttgatagaaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtggg 40411410  T
Q  177 attttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||||       |||||||||||||||||||||||||||| |||||||||    
T  40411409 attttaaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 40411353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 11632685 - 11632836
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  11632685 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 11632784  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||| ||       |||||||||||||||||||||||||||| |||||||||    
T  11632785 aaaatactttttttgaaagactttttacaatcaagattctttgcaagatttt 11632836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 10553818 - 10553672
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaag 186  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  10553818 tgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggattttaaaag 10553719  T
Q  187 acnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||       |||||||||||||||||||||||||||| |||||||||    
T  10553718 actttttttgaaagactttttacaatcaagattctttgcaagatttt 10553672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 13949800 - 13949951
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||| |    
T  13949800 ggggatgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggattat 13949899  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||||||| |||||||||    
T  13949900 aaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 13949951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 10553439 - 10553583
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  10553439 ggggtgtattggattgagatttaaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttta 10553538  T
Q  183 aaagacnnnnnnngaaagactttttacaatcaagattctttacaa 227  Q
    ||| |        ||||||||||||||||||||||||||||||||    
T  10553539 aaaaaaaaattttgaaagactttttacaatcaagattctttacaa 10553583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 18676939 - 18677033
Alignment:
Q  91 ttgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaa 185  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| |||||| | |||||||||||||||||||    
T  18676939 ttggattgagattttaaaagactattttgatagaaaaaatcttgaagattttaaaagattttgttgtattgtagtgattttgtgggattttaaaa 18677033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 3603459 - 3603596
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||| ||||| | |||| ||||||||||||| ||||||||||||   | ||||||||||||||||||||| ||| |||||||| ||||||||| |||||    
T  3603459 gggggggtattagattgaaattttaaaagactgttttgatagaaatttttttgaagattttaaaagactttgttggattgtattgattttgtggaatttt 3603558  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagatt 219  Q
    ||||||        ||||||||||||||||||||||||    
T  3603559 aaaagattttttttgaaagactttttacaatcaagatt 3603596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 26629510 - 26629653
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    ||||| |||||||| |||||||||||||||||| ||||||| |||||| ||||||| ||||||||||| ||| | | ||||||   | | | || |||||    
T  26629510 aggggctgtattggattgagattttaaaagactattttgattgaaaaagtcttgaaaattttaaaagattttgtaggattgtaaagactctatgagattt 26629609  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagattcttta 224  Q
    ||||||||        ||||||||||||||||||||||| ||||    
T  26629610 taaaagacttgttttaaaagactttttacaatcaagatttttta 26629653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 13717189 - 13717084
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||| | | |   |||||||| |||||||| |||||||    
T  13717189 ggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattttgtgagatttta 13717090  T
Q  183 aaagac 188  Q
    ||||||    
T  13717089 aaagac 13717084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 4239578 - 4239686
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    |||||||||||||| ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   ||| |||||||| |||| ||||    
T  4239578 agggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattttattaattctgtgagatt 4239677  T
Q  180 ttaaaagac 188  Q
    |||||||||    
T  4239678 ttaaaagac 4239686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 13999213 - 13999320
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||    
T  13999213 gggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 13999312  T
Q  181 taaaagac 188  Q
    ||||||||    
T  13999313 taaaagac 13999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 40012816 - 40012923
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||||  | |   |||||||| |||||||| |||||    
T  40012816 gggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagacagtgtgagattgtattgattttgtgagattt 40012915  T
Q  181 taaaagac 188  Q
    ||||||||    
T  40012916 taaaagac 40012923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 6827946 - 6828018
Alignment:
Q  77 ctttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaaga 148  Q
    |||||||||||||||||| |||||||||||||||| | |||||| | |||||| | |||||||| ||||||||    
T  6827946 ctttagggggtgtattggattgagattttaaaagattattttgacaaaaaaaagttttgaagatcttaaaaga 6828018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 2275268 - 2275374
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||| |||||||||||| | ||| || | ||| |||||| |||||||||||||||||| |   |||||||| ||||||  |||||     
T  2275268 agggggtgtattggattgggattttaaaagattatttggaaa-aaagaatcttaaagattttaaaagactttgtgtgattgtattgattttgatggattc 2275366  T
Q  181 taaaagac 188  Q
    ||||||||    
T  2275367 taaaagac 2275374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 39853447 - 39853341
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||   ||||||||||||| |||| ||| ||||| ||||  ||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  39853447 gggggtgtattggattagaattttaaaagactattttaatataaaaagtcttttagattttaaaagactctgtgagattgtattgattctgtgagatttt 39853348  T
Q  182 aaaagac 188  Q
    |||||||    
T  39853347 aaaagac 39853341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 41361965 - 41361923
Alignment:
Q  14 aagaatattcttaaaaagaactaagttgatttcagattgttaa 56  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  41361965 aagaatatgcttaaaaagaaccaagttgatttcagattgttaa 41361923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 1459312 - 1459401
Alignment:
Q  100 gattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||||||||    
T  1459312 gattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattatgtgagattttaaaagac 1459401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 6901352 - 6901421
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||||| |||| ||| |||||||||||||||||| |||||  | ||||| | |||||||||||||||||    
T  6901352 ttaggggatgtaatggattgagattttaaaagactattttggcaaaaaaagttttgaagattttaaaaga 6901421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 4549362 - 4549471
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgat--agaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    |||||||||||| | ||  |||||||||||||| |||| ||  | |||||||||| |||||||||||||| | | |   |||||||| ||| |||| |||    
T  4549362 agggggtgtattcgattaggattttaaaagactattttaataaaaaaaaaatctttaagattttaaaagattgtgtgagattgtattgattctgtgagat 4549461  T
Q  179 tttaaaagac 188  Q
    ||||||||||    
T  4549462 tttaaaagac 4549471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 13927027 - 13926921
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgataga-aaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    |||||||||||| ||  |||||||||||||| |||| ||| | |||| |||| ||||||| |||||||| | |   |||||||| ||| |||| ||||||    
T  13927027 ggggtgtattggattaggattttaaaagactattttaataaataaaagtctttaagatttaaaaagactgtgtgagattgtattgattctgtgagatttt 13926928  T
Q  182 aaaagac 188  Q
    |||||||    
T  13926927 aaaagac 13926921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 7858194 - 7858125
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaa 146  Q
    |||||||| |||||||| ||| |||||||||||||| || ||| | |||||| |||| ||||||||||||    
T  7858194 tttaggggatgtattggattgtgattttaaaagactattctgacaaaaaaaagtcttaaagattttaaaa 7858125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 5e-66; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 238 - 381
Target Start/End: Original strand, 7487462 - 7487605
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  7487462 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 7487561  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacag 381  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  7487562 agtttattgattataataatttgattgaaaaatgcaggttacag 7487605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 6288865 - 6289007
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  6288865 aaaaaagactattagataatatactactagcaggttaattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 6288964  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6288965 agtttattgattataataatttgattgaaaaatgcatgttaca 6289007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 21735983 - 21736129
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  21735983 aaaaaagactattatataatatactactagcaggttgattgagcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 21736082  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21736083 agtttattgattataataatttgattgaaaaatgcatgttacaggta 21736129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 42626721 - 42626863
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||    
T  42626721 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagaattaaaaataagttatgtt 42626820  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42626821 agtttattgattataataatttgattgaaaaatgcatgttaca 42626863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 238 - 373
Target Start/End: Complemental strand, 45547683 - 45547548
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||||||||||    
T  45547683 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattcttgacatatgatatcaaaataaatagaccaaaaaataagttatgtt 45547584  T
Q  338 agtttattgattataataatttgattgaaaaatgca 373  Q
    ||||||||||||||||||||||||||||||||||||    
T  45547583 agtttattgattataataatttgattgaaaaatgca 45547548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 82 - 233
Target Start/End: Complemental strand, 29941976 - 29941825
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  29941976 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 29941877  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       ||||||||||||||||||||||||||||||||||||||    
T  29941876 aaaagactttttttgaaagactttttacaatcaagattctttacaagatttt 29941825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 79 - 233
Target Start/End: Complemental strand, 45548005 - 45547851
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||    
T  45548005 ttagggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgagat 45547906  T
Q  179 tttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||       |||||||||||||||||||||||||||| |||||||||    
T  45547905 tttaaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 45547851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 238 - 347
Target Start/End: Complemental strand, 29941658 - 29941549
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  29941658 aaaaaagactattagataatatactattagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 29941559  T
Q  338 agtttattga 347  Q
    ||||||||||    
T  29941558 agtttattga 29941549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 7486956 - 7487062
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  7486956 gggggtgtattggattgagattttaaaagaccgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 7487055  T
Q  182 aaaagac 188  Q
    |||||||    
T  7487056 aaaagac 7487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 83 - 233
Target Start/End: Original strand, 6288556 - 6288706
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||   | || |||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  6288556 ggggtggattggattgagattttaaaagactgttttgatagaaatttttttaaagattttaaaagactttgttggattgtattgattttgtgggatttta 6288655  T
Q  183 aaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||| ||        ||||||||||||||||||||||||||| |||||||||    
T  6288656 aaaaactttttttaaaagactttttacaatcaagattctttgcaagatttt 6288706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 233
Target Start/End: Original strand, 35171377 - 35171535
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagac----tttattgaattgtattaattttgtg 174  Q
    ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||  ||| |||||||| ||||||||    
T  35171377 ttagggggtgtgttggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagacttcgttcgttggattgtattgattttgtg 35171476  T
Q  175 ggattttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
     |||||||||||||        ||||||||||||||||||| ||||||| ||| |||||    
T  35171477 agattttaaaagactttttttaaaagactttttacaatcaaaattctttgcaaaatttt 35171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 35172007 - 35172080
Alignment:
Q  307 aaaataaatagacctaaaaataagttatgttagtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35172007 aaaaaaaaaagacctaaaaataagttatgttagtttattgattataataatttgattgaaaaatgcatgttaca 35172080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 35171749 - 35171832
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacct 321  Q
    ||||||||||||||||||||| |||||| ||| ||||||| ||||||||| || ||| ||||||||||||||||||||||||||    
T  35171749 aaaaaagactattagataatatactactggcatgttgattaatcttaaaatttctggacatatgatatcaaaataaatagacct 35171832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 36599148 - 36599284
Alignment:
Q  86 gtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaa 185  Q
    |||||||||  ||| |||||||| |||| |||| |||||||||||||||||||||||||||||||||| |  ||| |||| ||||| ||| |||||||||    
T  36599148 gtgtattggaatgaaattttaaaggactattttaatagaaaaaatcttgaagattttaaaagactttaatcgattatattgattttatggtattttaaaa 36599247  T
Q  186 gacnnnnnnngaaagactttttacaatcaagattctt 222  Q
    ||         |||||||||||||||| |||||||||    
T  36599248 gattttttttaaaagactttttacaattaagattctt 36599284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 24192658 - 24192728
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| ||||| | |||||||||||||||||    
T  24192658 tttagggggtgtattggattgagattttaaaagactattttgataaaaaaagttttgaagattttaaaaga 24192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 78 - 219
Target Start/End: Complemental strand, 27979988 - 27979847
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    |||||||| |||||||| |||||||||| ||||| | |||||  | ||| |||||| |||||||||||||||||| |   |||||||||||||| |||||    
T  27979988 tttaggggatgtattggattgagattttgaaagattgttttgtcaaaaataatcttaaagattttaaaagactttgtgtgattgtattaattttatggga 27979889  T
Q  178 ttttaaaagacnnnnnnngaaagactttttacaatcaagatt 219  Q
     ||||||||||        |||||||||||| ||||||||||    
T  27979888 atttaaaagactttatttaaaagactttttataatcaagatt 27979847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 78 - 219
Target Start/End: Complemental strand, 28066518 - 28066377
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    |||||||| |||||||| |||||||||| ||||| | |||||  | ||| |||||| |||||||||||||||||| |   |||||||||||||| |||||    
T  28066518 tttaggggatgtattggattgagattttgaaagattgttttgtcaaaaataatcttaaagattttaaaagactttgtgtgattgtattaattttatggga 28066419  T
Q  178 ttttaaaagacnnnnnnngaaagactttttacaatcaagatt 219  Q
     ||||||||||        |||||||||||| ||||||||||    
T  28066418 atttaaaagactttatttaaaagactttttataatcaagatt 28066377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 36597649 - 36597781
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaag 186  Q
    ||||||||  |||||||||||| |||| |||||||||||    | ||||||||||||||||| |||  ||||||||||| |||||||| |||||||||||    
T  36597649 tgtattggaatgagattttaaaggactattttgatagaattttttttgaagattttaaaagattttgatgaattgtattgattttgtgagattttaaaag 36597748  T
Q  187 acnnnnnnngaaagactttttacaatcaagatt 219  Q
    ||        |||||||||||||||| ||||||    
T  36597749 acattttttaaaagactttttacaattaagatt 36597781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 25289250 - 25289144
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| |||||||||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  25289250 gggggtgtattggattaggattttaaaagactattttaataaaaaaaatctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 25289151  T
Q  182 aaaagac 188  Q
    |||||||    
T  25289150 aaaagac 25289144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 11535762 - 11535695
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||||||||  |||||||||||||||||| |||||| | ||||| |||||||||||||||||||    
T  11535762 agggggtgtattgaattgagattttaaaagactattttgacaaaaaaagtcttgaagattttaaaaga 11535695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 18178367 - 18178261
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  18178367 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 18178268  T
Q  182 aaaagac 188  Q
    |||||||    
T  18178267 aaaagac 18178261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 26789880 - 26789774
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  26789880 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 26789781  T
Q  182 aaaagac 188  Q
    |||||||    
T  26789780 aaaagac 26789774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 2289372 - 2289234
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||| |||||||||||| | ||||   | ||| |||||| |||||||||||||||||| |   |||||||| ||||||  ||||||    
T  2289372 agggggtgtattggattgggattttaaaagattgttttagaaaaaagaatcttaaagattttaaaagactttgtgtgattgtattgattttgatggattt 2289273  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagatt 219  Q
    ||||||||        || ||||||||||||||||||||    
T  2289272 taaaagactttattgaaaggactttttacaatcaagatt 2289234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 24935292 - 24935356
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||||||||| |||||||||||||||||| ||||| || ||||| || ||||||||||||||||    
T  24935292 gggtgtattggattgagattttaaaagactattttggtaaaaaaagtcatgaagattttaaaaga 24935356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 25683985 - 25684049
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||||||||| |||||||||||||||||| ||||| || ||||| || ||||||||||||||||    
T  25683985 gggtgtattggattgagattttaaaagactattttggtaaaaaaagtcatgaagattttaaaaga 25684049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 3464685 - 3464576
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggat 178  Q
    |||||||||||||||| ||  ||||||| |||||| |||| ||  ||||| |||| |||||||||||||||| | |   ||| |||| |||||||| |||    
T  3464685 ttagggggtgtattggattaggattttacaagactattttaattaaaaaagtctttaagattttaaaagactgtgtcagattctattgattttgtgagat 3464586  T
Q  179 tttaaaagac 188  Q
    ||||||||||    
T  3464585 tttaaaagac 3464576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 28845672 - 28845567
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||| ||||||| | |   |||||||| ||| |||| |||||||    
T  28845672 ggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagatttttaaagactatgtgagattgtattgattctgtgagatttta 28845573  T
Q  183 aaagac 188  Q
    ||||||    
T  28845572 aaagac 28845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 10658530 - 10658423
Alignment:
Q  77 ctttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatc-ttgaagattttaaaagactttattgaattgtattaattttgtgg 175  Q
    |||||||||||||||||| ||  |||||||||||||| |||| ||| ||||| || || |||||||||||||||| |||   |||||||| ||||||||     
T  10658530 ctttagggggtgtattggattaggattttaaaagactattttaata-aaaaagtcttttaagattttaaaagactgtatgagattgtattgattttgtga 10658432  T
Q  176 gattttaaa 184  Q
    | |||||||    
T  10658431 gtttttaaa 10658423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 12135619 - 12135555
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||||||||| |||||||||| ||||||| |||||  | |||||||| ||||||||||||||||    
T  12135619 gggtgtattggattgagattttgaaagactattttggcaaaaaaaatcatgaagattttaaaaga 12135555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 43023599 - 43023507
Alignment:
Q  96 ttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||||||||||| ||||   | ||| |||||| |||||||||||| |||||||   |||||||| ||||||  ||||||||||||||    
T  43023599 ttgagattttaaaagactgttttagaaaaaagaatcttaaagattttaaaaaactttatgtgattgtattgattttgatggattttaaaagac 43023507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 15283597 - 15283704
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattg-aattgtattaattttgtgggattt 180  Q
    ||||||||||||| ||| |||||||||||| | ||||   | ||| |||||| |||||||||||| |||||| ||  |||||||| ||||||  ||||||    
T  15283597 gggggtgtattggattgggattttaaaagattgttttagaaaaaagaatcttaaagattttaaaaaactttagtgtgattgtattgattttgatggattt 15283696  T
Q  181 taaaagac 188  Q
    ||||||||    
T  15283697 taaaagac 15283704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 13832685 - 13832774
Alignment:
Q  100 gattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||||||||    
T  13832685 gattttaaaagactattttaataaaaaaaaatctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagac 13832774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 14919805 - 14919895
Alignment:
Q  132 ttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagacnnnnnnngaaagactttttacaatcaagattctt 222  Q
    ||||| ||||||||||| ||| ||| |||||||| ||||||||  ||||||||||||        ||||| ||||||||||||||||||||    
T  14919805 ttgaaaattttaaaagattttgttggattgtattgattttgtgaaattttaaaagacattttttaaaagattttttacaatcaagattctt 14919895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 42626455 - 42626550
Alignment:
Q  136 agattttaaaagactttattgaattgtattaattttgtgggattttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||||||||  |||||| |||||||| ||||  | ||||||||||||||       ||||||||||||||||| |||||| ||| |||||||||    
T  42626455 agattttaaaaga--ttattggattgtattgatttattaggattttaaaagactttttttgaaagactttttacaattaagattttttgcaagatttt 42626550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 7487057 - 7487093
Alignment:
Q  197 aaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||||||||||||||||||||| |||||||||    
T  7487057 aaagactttttacaatcaagattctttgcaagatttt 7487093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 43079560 - 43079472
Alignment:
Q  101 attttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    ||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||||||||    
T  43079560 attttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattatgtgagattttaaaagac 43079472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 30046669 - 30046606
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||||| |||| ||||| ||||||| ||||| || ||||| || ||||||||||||||||    
T  30046669 ggtgtattggattgaaattttgaaagactattttggtaaaaaaagtcatgaagattttaaaaga 30046606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 30137713 - 30137650
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    |||||||||| |||| ||||| ||||||| ||||| || ||||| || ||||||||||||||||    
T  30137713 ggtgtattggattgaaattttgaaagactattttggtaaaaaaagtcatgaagattttaaaaga 30137650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 38821245 - 38821356
Alignment:
Q  78 tttagggg-gtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtggg 176  Q
    |||||||| ||||||||  |||||||||||||||| | |||||  | | |||||  |||||||||||||||| ||| |   ||| |||| ||||||| ||    
T  38821245 tttaggggcgtgtattgaattgagattttaaaagattattttggcaaacaaaattctgaagattttaaaagattttgtgagattatattgattttgttgg 38821344  T
Q  177 attttaaaagac 188  Q
    ||||||||||||    
T  38821345 attttaaaagac 38821356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 214624 - 214693
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatc-ttgaagattttaaaagact 150  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| || || ||||||||||||||||    
T  214624 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtcttttaagattttaaaagact 214693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 34027781 - 34027882
Alignment:
Q  87 tgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaag 186  Q
    |||||||| |||||||||||||| | | |||||  | | |||||||||||||||||||| || ||| |   ||| |||| | ||||| ||||||||||||    
T  34027781 tgtattggattgagattttaaaatattattttggcaaacaaaatcttgaagattttaaaggattttgtgagattatattgactttgttggattttaaaag 34027880  T
Q  187 ac 188  Q
    ||    
T  34027881 ac 34027882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 35907036 - 35906983
Alignment:
Q  99 agattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagacttt 152  Q
    ||||||||||||||| |||||||  ||||| |||| ||||||||||| ||||||    
T  35907036 agattttaaaagactattttgatgaaaaaagtctttaagattttaaatgacttt 35906983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 7027982 - 7027894
Alignment:
Q  100 gattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||||| | |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||| ||||    
T  7027982 gattttaaaagattattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaatagac 7027894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 81094 - 81240
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| |||||||    
T  81094 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaataaacctaaaaataaattatgtt 81193  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  81194 agtttattgattataataatttgattgaaaaatgcatgttacaggta 81240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 80792 - 80943
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  80792 gggggtgtattggattgagattttaaaagacttttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 80891  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||||||| |||||||||    
T  80892 aaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 80943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 238 - 377
Target Start/End: Original strand, 20757 - 20896
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  20757 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaatcatggacatatgatatcaaaataaatagacctaaaaataagttatgtt 20856  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgtt 377  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  20857 agtttattgattattataatttgattgaaaaatgcatgtt 20896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 20446 - 20597
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  20446 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 20545  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||| ||| |||||||||    
T  20546 aaaagactttttttgaaagactttttacaatcaagattgtttgcaagatttt 20597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 238 - 373
Target Start/End: Original strand, 6476064 - 6476199
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  6476064 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaatagacctaaaaataagttatgtt 6476163  T
Q  338 agtttattgattataataatttgattgaaaaatgca 373  Q
    ||||||||||||||||||||||||||||||||||||    
T  6476164 agtttattgattataataatttgattgaaaaatgca 6476199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 238 - 377
Target Start/End: Original strand, 29865062 - 29865201
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  29865062 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaatcatggacatatgatatcaaaataaatagacctaaaaataagttatgtt 29865161  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgtt 377  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  29865162 agtttattgattattataatttgattgaaaaatgcatgtt 29865201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 3109668 - 3109814
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||||||||||| |||||| ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  3109668 aaaaaagactattagataatatactactagcaggtttattgattttaaaaattctggatatatgatatcaaaataaatagacctaaaaataagttatgtt 3109767  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3109768 agtttattgattataataatttgattgaaaaatgcatgttacaggta 3109814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 80 - 233
Target Start/End: Original strand, 3109347 - 3109500
Alignment:
Q  80 tagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatt 179  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  3109347 tagggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatt 3109446  T
Q  180 ttaaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||||       ||||||||||||||||| |||||||||| |||||||||    
T  3109447 ttaaaagactttttttgaaagactttttacaattaagattctttgcaagatttt 3109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 29864751 - 29864902
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  29864751 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 29864850  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||       |||||||||||||||||||||||| ||| |||||||||    
T  29864851 aaaagactttttttgaaagactttttacaatcaagattgtttgcaagatttt 29864902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 83 - 233
Target Start/End: Original strand, 6475743 - 6475893
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  6475743 ggggtgtattgaattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttta 6475842  T
Q  183 aaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||       |||||||||||||||||||||||||||| ||| |||||    
T  6475843 aaagactttttttgaaagactttttacaatcaagattcttttcaatatttt 6475893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 7104619 - 7104513
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| | | ||||| |||| |||||||||||||||||| | | |||||||| ||| |||| ||||||    
T  7104619 gggggtgtattggattaggattttaaaagacttttttaacaaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtgagatttt 7104520  T
Q  182 aaaagac 188  Q
    |||||||    
T  7104519 aaaagac 7104513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 8790011 - 8790117
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| | | ||||| |||| |||||||||||||||||| | | |||||||| ||| |||| ||||||    
T  8790011 gggggtgtattggattaggattttaaaagacttttttaacaaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtgagatttt 8790110  T
Q  182 aaaagac 188  Q
    |||||||    
T  8790111 aaaagac 8790117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 35165725 - 35165661
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||||||||| |||||||||||||||||| ||||| || ||||| || ||||||||||||||||    
T  35165725 gggtgtattggattgagattttaaaagactattttggtaaaaaaagtcatgaagattttaaaaga 35165661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 30384171 - 30384277
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| |||||  ||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  30384171 gggggtgtattggattaggattttaaaagactattttaataaaaaaagcctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 30384270  T
Q  182 aaaagac 188  Q
    |||||||    
T  30384271 aaaagac 30384277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 31068515 - 31068409
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| ||||  |||||    
T  31068515 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgatatttt 31068416  T
Q  182 aaaagac 188  Q
    |||||||    
T  31068415 aaaagac 31068409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 31896732 - 31896626
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||| ||| | |   |||||||| ||| |||| ||||||    
T  31896732 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaatactgtgtgagattgtattgattctgtgagatttt 31896633  T
Q  182 aaaagac 188  Q
    |||||||    
T  31896632 aaaagac 31896626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 14261552 - 14261656
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaa 183  Q
    ||||||||||| ||  |||||||||||||  |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||||    
T  14261552 gggtgtattggattatgattttaaaagacaattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 14261651  T
Q  184 aagac 188  Q
    |||||    
T  14261652 aagac 14261656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 4199583 - 4199693
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatc-ttgaagattttaaaagactttattgaattgtattaattttgtggga 177  Q
    |||||||||||||||| ||  |||||||||| ||| |||| ||| ||||| || || |||||||||||||||| | |   |||||||| ||| |||| ||    
T  4199583 ttagggggtgtattggattaggattttaaaacactattttaataaaaaaagtcttttaagattttaaaagactgtgtgagattgtattgattctgtgaga 4199682  T
Q  178 ttttaaaagac 188  Q
    |||||||||||    
T  4199683 ttttaaaagac 4199693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 27585205 - 27585290
Alignment:
Q  103 tttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    ||||||||||| |||| ||| |||||||||| |||||||||||||||| | |   ||| |||| ||| |||| |||||||||||||    
T  27585205 tttaaaagactattttaataaaaaaaatctttaagattttaaaagactgtgtgagattttattgattctgtgagattttaaaagac 27585290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 10008374 - 10008411
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttg 119  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  10008374 gggggtgtattggattgagattttaaaagactattttg 10008411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 34774454 - 34774374
Alignment:
Q  108 aagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||||||||||    
T  34774454 aagactattttaataaaaaaagtctttaagattttaaaagactgtgtaagattgtattgattctgtgagattttaaaagac 34774374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 384
Target Start/End: Original strand, 34126 - 34272
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| |||||||    
T  34126 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattctggacatatgatatcaaaataaataaacctaaaaataaattatgtt 34225  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  34226 agtttattgattataataatttgattgaaaaatgcatgttactggta 34272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 81 - 233
Target Start/End: Original strand, 33823 - 33975
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  33823 agggggtgtattggattgagattttaaaagacttttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggattt 33922  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||       |||||||||||||||||||||||||||| |||||||||    
T  33923 taaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 33975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 8583320 - 8583462
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  8583320 aaaaaagactattagataatatactactaacaggttgattgatcttaaaaattctagacatatgatatcaaaataaatagacctaaaaataagttatgtt 8583419  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8583420 agtttattgattataataatttgattgaaaaatgcatgttaca 8583462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 42217756 - 42217898
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||    
T  42217756 aaaaaagactattagataatatactactagcatgttgattgatcttaaaaattctggacatatgatatcaaaatgaatagacttaaaaataagttatgtt 42217855  T
Q  338 agtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42217856 agtttattgattataataatttgattgaaaaatgcatgttaca 42217898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 243 - 380
Target Start/End: Complemental strand, 42315641 - 42315504
Alignment:
Q  243 agactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgttagttt 342  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||    
T  42315641 agactattagataatacactactagcaggttgattgatcttaaaaattctcaacatatgatatcaaaataaatagacctaaaaataagttatgttagttt 42315542  T
Q  343 attgattataataatttgattgaaaaatgcatgttaca 380  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42315541 attgattataataatttgattgaaaaatgcatgttaca 42315504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 238 - 380
Target Start/End: Complemental strand, 56398776 - 56398633
Alignment:
Q  238 aaaaaagactattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgtt 337  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||| |||    
T  56398776 aaaaaagactattagataatatactactagcaggttgattgatcttaaaaattcaggacatatgatatcaaaataaatagacctaaaaataagttacgtt 56398677  T
Q  338 agtttattgattataataatttga-ttgaaaaatgcatgttaca 380  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  56398676 agtttattgattataataatttgatttgaaaaatgcatgttaca 56398633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 247 - 380
Target Start/End: Original strand, 3435294 - 3435427
Alignment:
Q  247 tattagataataaactactagcaggttgattgatcttaaaaattatgggcatatgatatcaaaataaatagacctaaaaataagttatgttagtttattg 346  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3435294 tattagataatatactactagcaggttgattgatcttaaaaatcctgaacatatgatatcaaaataaatagacctaaaaataagttatgttagtttattg 3435393  T
Q  347 attataataatttgattgaaaaatgcatgttaca 380  Q
    ||||||||||||||||||||||||||||||||||    
T  3435394 attataataatttgattgaaaaatgcatgttaca 3435427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 7821037 - 7820885
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||| ||||||    
T  7821037 agggggtgtattggattgagattttaaaagactgatttgatagaaaaattcttgaagattttaaaagactttgttggattgtattgattttgtaggattt 7820938  T
Q  181 taaaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||||       |||||||||||||||||||||||||||| |||||||||    
T  7820937 taaaagactttttttgaaagactttttacaatcaagattctttgcaagatttt 7820885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 90 - 233
Target Start/End: Original strand, 8583008 - 8583151
Alignment:
Q  90 attgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagacn 189  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||      
T  8583008 attggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggattttaaaagatt 8583107  T
Q  190 nnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
          |||||||||||||||||||||||||||| |||||||||    
T  8583108 ttttttgaaagactttttacaatcaagattctttgcaagatttt 8583151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 42315969 - 42315832
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  42315969 gggggtgtattggattgagattttaaaagactgttttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtgggatttt 42315870  T
Q  182 aaaagacnnnnnnngaaagactttttacaatcaagatt 219  Q
    |||| ||       ||||||||||||||||||||||||    
T  42315869 aaaacactttttttgaaagactttttacaatcaagatt 42315832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 233
Target Start/End: Original strand, 42217448 - 42217597
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||    
T  42217448 ggggtgtatttgattgagattttaaaagactgttttgatagaaaaaatcttgaagatttt-aaagactttgttggattgtattgattttgtgggatttta 42217546  T
Q  183 aaagacnnnnnnngaaagactttttacaatcaagattctttacaagatttt 233  Q
    ||||||        ||| ||||||||| ||||||||||||| |||||||||    
T  42217547 aaagactttttttaaaatactttttacgatcaagattctttgcaagatttt 42217597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 3434840 - 3434977
Alignment:
Q  96 ttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagacnnnnnnn 195  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| |||||||||||            
T  3434840 ttgagattttaaaagactattttaatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtggaattttaaaagatttttttt 3434939  T
Q  196 gaaagactttttacaatcaagattctttacaagatttt 233  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  3434940 gaaagactttttacaatcaagattgtttgcaagatttt 3434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 7809086 - 7808979
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||||    
T  7809086 agggggtgtattggattgagattttaaaagactggtttgatagaaaaaatcttgaagattttaaaagactttgttggattgtattgattttgtaggattt 7808987  T
Q  181 taaaagac 188  Q
    ||||||||    
T  7808986 taaaagac 7808979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 307 - 384
Target Start/End: Complemental strand, 7820753 - 7820676
Alignment:
Q  307 aaaataaatagacctaaaaataagttatgttagtttattgattataataatttgattgaaaaatgcatgttacaggta 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7820753 aaaataaatagacctaaaaataagttatgttagtttattgattataataatttgattgaaaaatgcatgttacaggta 7820676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 44930695 - 44930558
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |    ||||||| ||||| ||| ||||||    
T  44930695 ggggtgtattggattgagattttaaaagactgttttgataaaaaaaatcttaaagattttaaaagactttgt----ttgtattgattttatggaatttta 44930600  T
Q  183 aaagacnnnnnnngaaagactttttacaatcaagattcttta 224  Q
    ||||||       |||||||||| ||||||||||||||||||    
T  44930599 aaagactttttttgaaagactttctacaatcaagattcttta 44930558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 56399125 - 56398986
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||  |||||||||||||||||  ||||||||||||   | ||||||||||||||||||||| ||||||| |||| |||||||| ||||||     
T  56399125 ggggtgtattgaattgagattttaaaagaccgttttgatagaaatttt-ttgaagattttaaaagactttgttgaattttattgattttgtgagattttt 56399027  T
Q  183 aaagacnnnnnnngaaagactttttacaatcaagattcttt 223  Q
    ||| ||       ||||||||||||||||||||||||||||    
T  56399026 aaaaactttttttgaaagactttttacaatcaagattcttt 56398986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 7808827 - 7808754
Alignment:
Q  307 aaaataaatagacctaaaaataagttatgttagtttattgattataataatttgattgaaaaatgcatgttaca 380  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||    
T  7808827 aaaataaatagacctaaaaataagtgacgttactttattgattataataatttgattgacaaatgcatgttaca 7808754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 44930472 - 44930422
Alignment:
Q  328 aagttatgttagtttattgattataataatttgattgaaaaatgcatgtta 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44930472 aagttatgttagtttattgattataataatttgattgaaaaatgcatgtta 44930422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 47686908 - 47686842
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  47686908 gggggtgtattggattgagattttaaaagactattttgataaaaaaagtcttgaagattttgaaaga 47686842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 48262170 - 48262064
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |  ||||||||| ||| |||| ||||||    
T  48262170 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgaaattgtattgattctgtgagatttt 48262071  T
Q  182 aaaagac 188  Q
    |||||||    
T  48262070 aaaagac 48262064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 28846168 - 28846239
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatc-ttgaagattttaaaagactt 151  Q
    |||||||||||||| |||||||||||||||||| |||||||  |||||||| || |||||||||||||||||    
T  28846168 agggggtgtattggattgagattttaaaagactattttgatgaaaaaaatcttttaagattttaaaagactt 28846239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 27769159 - 27769053
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  27769159 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 27769060  T
Q  182 aaaagac 188  Q
    |||||||    
T  27769059 aaaagac 27769053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 32683133 - 32683239
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||    
T  32683133 agggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 32683232  T
Q  181 taaaaga 187  Q
    |||||||    
T  32683233 taaaaga 32683239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 38234698 - 38234592
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||  |||||||||||||| |||| | | ||||| |||| |||||||||||||||||| | | |||||||| ||| |||  ||||||    
T  38234698 gggggtgtattggattaggattttaaaagacttttttaacaaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtaagatttt 38234599  T
Q  182 aaaagac 188  Q
    |||||||    
T  38234598 aaaagac 38234592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 54510647 - 54510581
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaaga 148  Q
    ||||||||||||| |||||||||||||||||| |||||| | ||||| ||| |||||||||||||||    
T  54510647 gggggtgtattggattgagattttaaaagactattttgacaaaaaaagtctggaagattttaaaaga 54510581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 5442486 - 5442382
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattga-attgtattaattttgtgggattt 180  Q
    ||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| ||||||||||||||||    ||| |||||||| |||||||| |||||    
T  5442486 gggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaaaagact---gtgagattgtattgattttgtgagattt 5442390  T
Q  181 taaaagac 188  Q
    ||||||||    
T  5442389 taaaagac 5442382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 23988291 - 23988186
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||| ||  |||||||||||||| |||| ||| |||||||||| |||||||||||||| | | |   |||||||| ||| |||| |||||||    
T  23988291 ggggtgtattggattaggattttaaaagactattttaataaaaaaaatctttaagattttaaaagaatatgtgagattgtattgattctgtgagatttta 23988192  T
Q  183 aaagac 188  Q
    ||||||    
T  23988191 aaagac 23988186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 54342243 - 54342136
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||   ||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| |||| |||||    
T  54342243 agggggtgtattggattagaattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 54342144  T
Q  181 taaaagac 188  Q
    ||||||||    
T  54342143 taaaagac 54342136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 388610 - 388654
Alignment:
Q  76 actttagggggtgtattgggttgagattttaaaagactcttttga 120  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  388610 actttagggggtgtattggattgagattttaaaagactattttga 388654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 5117900 - 5117836
Alignment:
Q  86 gtgtattgggttgagattttaaaagactcttttg-atagaaaaaa-tcttgaagattttaaaaga 148  Q
    ||||||||| |||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||    
T  5117900 gtgtattggattgagattttaaaagactattttgaataaaaaaaagtcttgaagattttaaaaga 5117836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 50019286 - 50019180
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||   ||||||||||||| |||| ||| ||||| |||| || ||||||||||||| | |   |||||||| ||| |||| ||||||    
T  50019286 gggggtgtattggattagaattttaaaagactattttaataaaaaaagtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 50019187  T
Q  182 aaaagac 188  Q
    |||||||    
T  50019186 aaaagac 50019180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 32323163 - 32323058
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    ||||||||||| ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||| | | |   |||||||| ||| |||| |||||||    
T  32323163 gggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattctgtgagatttta 32323064  T
Q  183 aaagac 188  Q
    ||||||    
T  32323063 aaagac 32323058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 49833989 - 49834078
Alignment:
Q  100 gattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||||||| |||| ||| |||||| |||| |||||||||||||| | | |   |||||||| |||||||| |||||||||||||    
T  49833989 gattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattatgtgagattgtattgattttgtgagattttaaaagac 49834078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 29649147 - 29649235
Alignment:
Q  100 gattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||||||| |||| ||| ||||| |||| |||||||||||||||| | |   |||||||| ||| | || |||||||||||||    
T  29649147 gattttaaaagactattttaataaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctatgagattttaaaagac 29649235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 41726198 - 41726095
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattga-attgtattaattttgtgggattttaa 183  Q
    |||||||||| ||  |||||||||||||| |||| ||| ||||  |||| |||||||||||||| ||  |||| |||||||| ||| |||| ||||||||    
T  41726198 ggtgtattggattatgattttaaaagactattttaataaaaaatgtctttaagattttaaaaga-ttgtttgagattgtattgattatgtgagattttaa 41726100  T
Q  184 aagac 188  Q
    |||||    
T  41726099 aagac 41726095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 49500635 - 49500707
Alignment:
Q  78 tttagggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagact 150  Q
    ||||||||||||||||| ||   ||||| ||||||| |||| ||| | |||||||| ||||||||||||||||    
T  49500635 tttagggggtgtattggattagaattttgaaagactattttaataaataaaatctttaagattttaaaagact 49500707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 5105040 - 5104966
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaagactcttttg-atagaaaaaatcttgaagattttaaaagacttt 152  Q
    |||||||||||||||| ||  |||||||||||||  ||||| ||| ||||| |||||  ||||||||||||||||    
T  5105040 ttagggggtgtattggattaggattttaaaagacaattttgtataaaaaaagtcttgtggattttaaaagacttt 5104966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 25937010 - 25936909
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||  |||||||||| || || | ||||| || |||||| ||| |||||||||||||||||| |  ||||||||| ||||| |  |||||||    
T  25937010 ggggtgtattgaattgagattttgaaggattgttttggtaaaaaaaa-cttaaagattttaaaagactttgtgtaattgtattgattttttaagatttta 25936912  T
Q  183 aaa 185  Q
    |||    
T  25936911 aaa 25936909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 44929872 - 44929904
Alignment:
Q  79 ttagggggtgtattgggttgagattttaaaaga 111  Q
    |||||||||||||||| ||||||||||||||||    
T  44929872 ttagggggtgtattggattgagattttaaaaga 44929904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 48531938 - 48532026
Alignment:
Q  100 gattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattttaaaagac 188  Q
    |||||||||||||| |||| ||| || || |||| |||||||||||||| | | |   |||||||| ||| |||| |||||||||||||    
T  48531938 gattttaaaagactattttaataaaataagtctttaagattttaaaagattctgtaagattgtattgattctgtgagattttaaaagac 48532026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 52110345 - 52110242
Alignment:
Q  83 ggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    |||||||||||  |||||||||| || || | |||||  | |||||||||| |||||||||||||| ||| |   |||||||| ||||| || |||||||    
T  52110345 ggggtgtattgaattgagattttgaacgattgttttggca-aaaaaatcttaaagattttaaaagattttgtgcgattgtattgattttttgagatttta 52110247  T
Q  183 aaaga 187  Q
    |||||    
T  52110246 aaaga 52110242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 937 - 1043
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||||||||||  |||| | |||||  | |||||||||| |||||||||||||| ||| |   |||||||| |||||||||||||||    
T  937 gggggtgtattggattgagattttgcaagattgttttggcaaaaaaaatcttaaagattttaaaagattttgtgtgattgtattgattttgtgggatttt 1036  T
Q  182 aaaagac 188  Q
    |||||||    
T  1037 aaaagac 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 3114 - 3219
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    ||||||||| | || ||||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   |||||||||||| |||| |||||||    
T  3114 gggtgtattagattaagattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattaattatgtgagatttta 3213  T
Q  183 aaagac 188  Q
    | ||||    
T  3214 agagac 3219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 3572 - 3676
Alignment:
Q  81 agggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggattt 180  Q
    |||||||||||||| ||  |||||||||||||| |||| ||| ||||| |||| |||||||||| ||||| | |   |||||||| ||| |||| |||||    
T  3572 agggggtgtattggattaggattttaaaagactattttaataaaaaaagtctttaagattttaagagactgtgtgagattgtattgattctgtgagattt 3671  T
Q  181 taaaa 185  Q
    |||||    
T  3672 taaaa 3676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 57169 - 57275
Alignment:
Q  82 gggggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagactttattgaattgtattaattttgtgggatttt 181  Q
    ||||||||||||| ||   ||||||||||||| |||| ||| ||||| || | |||||||||||||||| | |   |||||||| ||| |||| ||||||    
T  57169 gggggtgtattggattagaattttaaaagactattttaataaaaaaagtccttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 57268  T
Q  182 aaaagac 188  Q
    |||||||    
T  57269 aaaagac 57275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 36401 - 36506
Alignment:
Q  84 gggtgtattgggttgagattttaaaagactcttttgatagaaaaaa-tcttgaagattttaaaagactttattgaattgtattaattttgtgggatttta 182  Q
    ||||||||||| ||  |||||||||||||| |||| ||| |||||| |||| |||||||||||||||| | |   ||| |||| ||| |||| |||||||    
T  36401 gggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattatattgattctgtgagatttta 36500  T
Q  183 aaagac 188  Q
    ||||||    
T  36501 aaagac 36506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 21865 - 21800
Alignment:
Q  85 ggtgtattgggttgagattttaaaagactcttttgatagaaaaaatcttgaagattttaaaagact 150  Q
    |||||||||| || ||||||||||||| | |||| ||| ||||| |||| || |||||||||||||    
T  21865 ggtgtattggattaagattttaaaagattattttaatacaaaaagtctttaacattttaaaagact 21800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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