View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7928_low_7 (Length: 285)
Name: NF7928_low_7
Description: NF7928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7928_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 20 - 272
Target Start/End: Complemental strand, 42335299 - 42335047
Alignment:
| Q |
20 |
cagattaacatttttgcatgttgaagtaggacttaagaaacatgtcacaccttgtttataaccacattttgtttcttacttgcatgtttaaattctcaat |
119 |
Q |
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| T |
42335299 |
cagattaacatttttgcatgttgaagtaggacttaagaaacatgtcacaccttgtttataaccacattttgtttcttacttgcatgtttaaattctcaat |
42335200 |
T |
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| Q |
120 |
atgaattttatataacaatggtaagatacttgattttgataaaatctaaattttataactttacaaaattatatatcactgattttggggaagcatcaat |
219 |
Q |
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| T |
42335199 |
atgaattttatataacaatggtaagatacttgattttgataaaatctaaattttataactttacaaaattatatatcactgattttggggaagcatcaat |
42335100 |
T |
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| Q |
220 |
ccacacatacattacaatatacatacatgccaattatgatcatccctaaaaaa |
272 |
Q |
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| T |
42335099 |
ccacacatacattacaatatacatacatgccaattatgatcatccctaaaaaa |
42335047 |
T |
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