View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7929_high_3 (Length: 567)

Name: NF7929_high_3
Description: NF7929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7929_high_3
NF7929_high_3
[»] chr1 (41 HSPs)
chr1 (196-567)||(8401599-8401971)
chr1 (196-528)||(180024-180357)
chr1 (219-489)||(22348410-22348681)
chr1 (1-131)||(8402035-8402165)
chr1 (1-131)||(179817-179947)
chr1 (420-528)||(30802828-30802936)
chr1 (420-528)||(45890152-45890260)
chr1 (420-528)||(23319459-23319567)
chr1 (15-131)||(22348262-22348376)
chr1 (420-528)||(18057344-18057452)
chr1 (493-567)||(4097287-4097361)
chr1 (478-567)||(11422200-11422289)
chr1 (495-567)||(34370315-34370387)
chr1 (493-567)||(23174868-23174942)
chr1 (493-567)||(180365-180439)
chr1 (15-57)||(13463828-13463870)
chr1 (478-528)||(34370255-34370305)
chr1 (526-567)||(23174594-23174635)
chr1 (493-528)||(23319416-23319451)
chr1 (495-528)||(18057552-18057585)
chr1 (526-567)||(23174725-23174766)
chr1 (495-528)||(31084158-31084191)
chr1 (476-528)||(4097369-4097421)
chr1 (496-528)||(14229244-14229276)
chr1 (496-528)||(46590630-46590662)
chr1 (15-58)||(18597088-18597131)
chr1 (15-58)||(18750197-18750240)
chr1 (526-567)||(180526-180567)
chr1 (495-528)||(10498009-10498042)
chr1 (479-528)||(23174950-23174999)
chr1 (495-528)||(23319283-23319316)
chr1 (499-528)||(35197468-35197497)
chr1 (499-528)||(42134016-42134045)
chr1 (495-528)||(45890360-45890393)
chr1 (496-528)||(6708457-6708489)
chr1 (496-528)||(14389984-14390016)
chr1 (496-528)||(17811223-17811255)
chr1 (496-528)||(18928897-18928929)
chr1 (496-528)||(32143640-32143672)
chr1 (496-528)||(45849180-45849212)
chr1 (496-528)||(47693738-47693770)
[»] chr3 (33 HSPs)
chr3 (196-567)||(50754410-50754782)
chr3 (196-567)||(52986947-52987310)
chr3 (196-567)||(31852514-31852891)
chr3 (1-131)||(50754213-50754343)
chr3 (1-131)||(52987376-52987506)
chr3 (15-131)||(31852329-31852445)
chr3 (420-528)||(51361914-51362022)
chr3 (420-528)||(7044770-7044878)
chr3 (420-528)||(8718662-8718770)
chr3 (420-528)||(9070549-9070657)
chr3 (420-522)||(16276953-16277055)
chr3 (420-528)||(19384797-19384905)
chr3 (493-560)||(51361839-51361906)
chr3 (501-567)||(7044689-7044755)
chr3 (493-567)||(19384715-19384789)
chr3 (526-567)||(51361705-51361746)
chr3 (15-100)||(13603391-13603476)
chr3 (492-528)||(47728923-47728959)
chr3 (15-57)||(1005756-1005799)
chr3 (12-99)||(2216567-2216653)
chr3 (15-58)||(4444346-4444389)
chr3 (499-528)||(8718874-8718903)
chr3 (499-528)||(9070761-9070790)
chr3 (15-99)||(11262296-11262380)
chr3 (496-537)||(12974075-12974116)
chr3 (495-528)||(23756030-23756063)
chr3 (495-528)||(34562654-34562687)
chr3 (495-528)||(41191664-41191697)
chr3 (526-567)||(52986816-52986857)
chr3 (496-528)||(8036872-8036904)
chr3 (15-99)||(16289504-16289587)
chr3 (496-528)||(21175208-21175240)
chr3 (496-528)||(36185798-36185830)
[»] chr5 (35 HSPs)
chr5 (196-567)||(2826347-2826719)
chr5 (196-323)||(34329520-34329648)
chr5 (421-528)||(25016638-25016745)
chr5 (420-528)||(42512544-42512652)
chr5 (1-131)||(2826792-2826922)
chr5 (420-522)||(13363330-13363432)
chr5 (27-166)||(34329350-34329489)
chr5 (420-528)||(23335109-23335216)
chr5 (421-528)||(28069647-28069754)
chr5 (347-437)||(34329690-34329780)
chr5 (493-567)||(28069565-28069639)
chr5 (493-567)||(34329826-34329900)
chr5 (15-57)||(23568465-23568507)
chr5 (526-567)||(2826216-2826257)
chr5 (495-528)||(25016505-25016538)
chr5 (526-567)||(34330002-34330043)
chr5 (496-528)||(703802-703834)
chr5 (496-528)||(4951165-4951197)
chr5 (496-528)||(11376453-11376485)
chr5 (496-528)||(20134271-20134303)
chr5 (15-55)||(29189248-29189288)
chr5 (497-528)||(18464628-18464659)
chr5 (15-58)||(31549542-31549585)
chr5 (498-528)||(13363540-13363570)
chr5 (492-522)||(16552457-16552487)
chr5 (15-53)||(31411810-31411848)
chr5 (15-53)||(31422718-31422756)
chr5 (495-528)||(23334978-23335011)
chr5 (496-528)||(3340719-3340751)
chr5 (496-528)||(5630211-5630243)
chr5 (496-528)||(7286894-7286926)
chr5 (496-528)||(11660865-11660897)
chr5 (492-528)||(34329782-34329818)
chr5 (496-528)||(36864208-36864240)
chr5 (496-528)||(39861651-39861683)
[»] chr8 (44 HSPs)
chr8 (211-567)||(39657890-39658245)
chr8 (196-567)||(4835987-4836359)
chr8 (196-567)||(4841432-4841804)
chr8 (196-528)||(7058510-7058843)
chr8 (196-528)||(2750427-2750760)
chr8 (196-354)||(8550903-8551062)
chr8 (1-131)||(4836427-4836557)
chr8 (1-131)||(4841872-4842002)
chr8 (15-131)||(2750248-2750364)
chr8 (196-341)||(1209110-1209259)
chr8 (1-131)||(39658269-39658399)
chr8 (420-528)||(7614500-7614608)
chr8 (420-528)||(39022525-39022633)
chr8 (347-440)||(1209352-1209445)
chr8 (23-131)||(8550728-8550837)
chr8 (36-131)||(7058348-7058442)
chr8 (491-566)||(1209443-1209518)
chr8 (27-131)||(1208934-1209039)
chr8 (495-567)||(8551103-8551175)
chr8 (493-567)||(7058851-7058925)
chr8 (420-521)||(15260266-15260367)
chr8 (493-567)||(2750768-2750842)
chr8 (15-59)||(4838725-4838769)
chr8 (420-464)||(32986924-32986968)
chr8 (15-57)||(36577978-36578020)
chr8 (15-53)||(26872669-26872707)
chr8 (15-53)||(26875127-26875165)
chr8 (526-567)||(2751065-2751106)
chr8 (526-566)||(1209609-1209649)
chr8 (496-528)||(23504565-23504597)
chr8 (15-58)||(23091553-23091596)
chr8 (526-567)||(2750889-2750930)
chr8 (526-567)||(2750977-2751018)
chr8 (495-528)||(23397199-23397232)
chr8 (526-566)||(4835857-4835897)
chr8 (526-566)||(4841302-4841342)
chr8 (496-528)||(15809780-15809812)
chr8 (496-528)||(23567583-23567615)
chr8 (496-528)||(24472953-24472985)
chr8 (496-528)||(27506778-27506810)
chr8 (496-528)||(34343391-34343423)
chr8 (496-528)||(35448550-35448582)
chr8 (495-523)||(39022733-39022761)
chr8 (496-528)||(45409478-45409510)
[»] chr7 (38 HSPs)
chr7 (196-528)||(15974265-15974598)
chr7 (196-342)||(48305629-48305776)
chr7 (196-320)||(48691388-48691513)
chr7 (1-131)||(15974663-15974792)
chr7 (420-528)||(30430266-30430374)
chr7 (1-131)||(48305437-48305565)
chr7 (347-440)||(48305867-48305960)
chr7 (420-528)||(33798359-33798467)
chr7 (420-528)||(46024586-46024693)
chr7 (1-131)||(48691193-48691323)
chr7 (420-521)||(46572980-46573080)
chr7 (350-440)||(48691561-48691651)
chr7 (493-567)||(15974183-15974257)
chr7 (493-567)||(46572891-46572965)
chr7 (499-567)||(48691700-48691768)
chr7 (493-567)||(48306003-48306077)
chr7 (526-567)||(46572766-46572807)
chr7 (526-567)||(15974052-15974093)
chr7 (15-58)||(559892-559935)
chr7 (15-58)||(569801-569844)
chr7 (15-58)||(4185175-4185218)
chr7 (15-57)||(5200608-5200651)
chr7 (15-57)||(5209737-5209780)
chr7 (15-58)||(17515799-17515842)
chr7 (15-58)||(17537372-17537415)
chr7 (15-57)||(27967395-27967438)
chr7 (15-57)||(27976848-27976891)
chr7 (1-64)||(28396923-28396986)
chr7 (493-528)||(33798475-33798510)
chr7 (15-49)||(38411786-38411820)
chr7 (495-528)||(24360521-24360554)
chr7 (495-528)||(32091287-32091320)
chr7 (495-528)||(46024793-46024826)
chr7 (491-528)||(48305958-48305995)
chr7 (526-567)||(48691861-48691902)
chr7 (497-529)||(5758055-5758087)
chr7 (496-528)||(6620738-6620770)
chr7 (496-528)||(44426739-44426771)
[»] chr6 (26 HSPs)
chr6 (196-567)||(877606-877973)
chr6 (196-567)||(33345653-33346031)
chr6 (347-567)||(24736893-24737112)
chr6 (196-354)||(24737192-24737351)
chr6 (24-131)||(24737416-24737523)
chr6 (1-129)||(877412-877540)
chr6 (1-131)||(33346098-33346227)
chr6 (15-99)||(3042352-3042435)
chr6 (526-567)||(878063-878104)
chr6 (16-52)||(5995689-5995725)
chr6 (496-528)||(14237850-14237882)
chr6 (15-99)||(20215976-20216059)
chr6 (15-99)||(22109997-22110080)
chr6 (15-99)||(24919128-24919211)
chr6 (15-58)||(24296438-24296481)
chr6 (15-58)||(24310469-24310512)
chr6 (15-58)||(27048684-27048727)
chr6 (15-58)||(27058928-27058971)
chr6 (15-57)||(30996958-30997001)
chr6 (526-564)||(24736765-24736803)
chr6 (530-567)||(878210-878247)
chr6 (495-528)||(18611920-18611953)
chr6 (495-528)||(30909346-30909379)
chr6 (16-48)||(5488176-5488208)
chr6 (496-528)||(25119178-25119210)
chr6 (492-528)||(27079774-27079810)
[»] chr4 (46 HSPs)
chr4 (347-567)||(638495-638715)
chr4 (196-354)||(638256-638415)
chr4 (196-341)||(26446927-26447073)
chr4 (1-131)||(26447138-26447268)
chr4 (16-131)||(638076-638190)
chr4 (420-567)||(45256465-45256612)
chr4 (420-528)||(18923812-18923920)
chr4 (420-528)||(4168911-4169019)
chr4 (476-567)||(26577581-26577672)
chr4 (420-528)||(51836592-51836700)
chr4 (420-528)||(22180649-22180755)
chr4 (427-528)||(27764805-27764906)
chr4 (420-522)||(36621232-36621334)
chr4 (420-528)||(21097668-21097776)
chr4 (493-560)||(10473159-10473226)
chr4 (493-567)||(26446801-26446875)
chr4 (493-566)||(38245558-38245631)
chr4 (506-567)||(51836512-51836573)
chr4 (15-59)||(52296728-52296772)
chr4 (15-53)||(12997531-12997569)
chr4 (526-567)||(10473459-10473500)
chr4 (495-528)||(27765022-27765055)
chr4 (15-58)||(4749054-4749098)
chr4 (496-528)||(8157182-8157214)
chr4 (15-55)||(32215923-32215963)
chr4 (496-528)||(52325243-52325275)
chr4 (493-528)||(4169027-4169062)
chr4 (495-529)||(1728875-1728909)
chr4 (526-567)||(10473328-10473369)
chr4 (495-528)||(18924020-18924053)
chr4 (495-528)||(20862305-20862338)
chr4 (495-528)||(38010649-38010682)
chr4 (530-567)||(38245738-38245775)
chr4 (526-567)||(45256699-45256740)
chr4 (496-528)||(2124416-2124448)
chr4 (496-528)||(9813017-9813049)
chr4 (496-528)||(10374184-10374216)
chr4 (496-528)||(16474894-16474926)
chr4 (15-99)||(17141823-17141906)
chr4 (494-522)||(38245516-38245544)
chr4 (496-528)||(38563877-38563909)
chr4 (496-524)||(41025138-41025166)
chr4 (496-528)||(47568025-47568057)
chr4 (496-528)||(51076969-51077001)
chr4 (496-528)||(53526392-53526424)
chr4 (496-528)||(54895523-54895555)
[»] chr2 (39 HSPs)
chr2 (196-354)||(25193297-25193456)
chr2 (196-323)||(4579360-4579488)
chr2 (27-131)||(4579552-4579656)
chr2 (466-567)||(14550757-14550858)
chr2 (420-528)||(20710318-20710426)
chr2 (420-528)||(18297580-18297688)
chr2 (350-437)||(4579228-4579315)
chr2 (1-131)||(25193101-25193230)
chr2 (476-567)||(2264153-2264244)
chr2 (493-567)||(25193495-25193569)
chr2 (492-567)||(4579151-4579226)
chr2 (493-567)||(18297498-18297572)
chr2 (8-57)||(22186082-22186131)
chr2 (526-567)||(2264465-2264506)
chr2 (19-98)||(17686391-17686470)
chr2 (15-53)||(20622454-20622492)
chr2 (18-99)||(28479887-28479967)
chr2 (527-567)||(4579011-4579051)
chr2 (15-58)||(33308194-33308238)
chr2 (15-58)||(21851547-21851590)
chr2 (15-58)||(21859982-21860025)
chr2 (15-57)||(25262584-25262627)
chr2 (15-58)||(27425297-27425340)
chr2 (15-58)||(27440343-27440386)
chr2 (15-58)||(39756289-39756332)
chr2 (495-528)||(4281088-4281121)
chr2 (526-567)||(14550614-14550655)
chr2 (526-567)||(18297367-18297408)
chr2 (15-48)||(34543055-34543088)
chr2 (495-528)||(41345342-41345375)
chr2 (496-528)||(1095251-1095283)
chr2 (527-567)||(4578751-4578791)
chr2 (527-567)||(4578881-4578921)
chr2 (496-528)||(12449126-12449158)
chr2 (15-47)||(21322012-21322044)
chr2 (496-528)||(22596376-22596408)
chr2 (496-528)||(25575395-25575427)
chr2 (496-528)||(30777419-30777451)
chr2 (496-528)||(42364633-42364665)
[»] scaffold0238 (3 HSPs)
scaffold0238 (420-521)||(24727-24828)
scaffold0238 (526-567)||(24518-24559)
scaffold0238 (525-564)||(24664-24703)
[»] scaffold0194 (1 HSPs)
scaffold0194 (420-528)||(28157-28265)
[»] scaffold0097 (1 HSPs)
scaffold0097 (420-528)||(14157-14265)
[»] scaffold0009 (1 HSPs)
scaffold0009 (432-528)||(203357-203453)
[»] scaffold0338 (3 HSPs)
scaffold0338 (493-567)||(6171-6245)
scaffold0338 (491-528)||(6126-6163)
scaffold0338 (526-567)||(6335-6376)
[»] scaffold1120 (1 HSPs)
scaffold1120 (15-94)||(351-430)
[»] scaffold0206 (1 HSPs)
scaffold0206 (15-99)||(19467-19550)
[»] scaffold0004 (1 HSPs)
scaffold0004 (496-528)||(96139-96171)
[»] scaffold1896 (1 HSPs)
scaffold1896 (15-53)||(437-475)
[»] scaffold0669 (1 HSPs)
scaffold0669 (15-55)||(6040-6080)
[»] scaffold0609 (1 HSPs)
scaffold0609 (15-99)||(2512-2595)
[»] scaffold0249 (1 HSPs)
scaffold0249 (496-528)||(23616-23648)
[»] scaffold0129 (1 HSPs)
scaffold0129 (496-528)||(19992-20024)
[»] scaffold0027 (1 HSPs)
scaffold0027 (15-99)||(64680-64763)


Alignment Details
Target: chr1 (Bit Score: 309; Significance: 1e-174; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 196 - 567
Target Start/End: Complemental strand, 8401971 - 8401599
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8401971 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttcttcgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 8401872  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||||| ||||||||||||     
T  8401871 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtggtagacgatgtttatgtga 8401772  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  8401771 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttatgatgttaaagggatttatggctgggaaa 8401672  T
Q  495 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  8401671 ctgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatga 8401599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 196 - 528
Target Start/End: Original strand, 180024 - 180357
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||    
T  180024 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggaatttttgttatgttgaagtgttgttccgatccggttcg 180123  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||| |||||||||||| ||||| |||||||||||||||||||||||||     
T  180124 aatcttgttgtggtaggctgtacaaactctccctctacctcttctaaaccgattctggatttattgacgaattcgagagtggtagatgatgtttatgtga 180223  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  180224 ttttctgtggtttagtgttcatgaggttcacagtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaa 180323  T
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||| ||||||||||||||||||||||| ||||    
T  180324 ctgctagaaaccattaagtacatctaatggtttt 180357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 219 - 489
Target Start/End: Original strand, 22348410 - 22348681
Alignment:
Q  219 cgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcgaattttgttgtggtaggctgtac 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||     
T  22348410 cgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttatgttgaagtgttgttccgatccggttcgaatcttgttgtagtaggctgtat 22348509  T
Q  318 gaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtggttttctgtggtttagtgttcatg 417  Q
     ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  22348510 aaactctccctctacctcttctaaatcgattctggatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttaatgttcatg 22348609  T
Q  418 aggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctg 489  Q
    || ||||||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||| |||||    
T  22348610 agtttcacggtttcagatctgaagttcttactggattcgaaatctttgtgatattagagggatttatggctg 22348681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 8402165 - 8402035
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| || |||||||||||||||||||| ||| | ||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  8402165 atgatgattccggcgcggtggccggtggtggcaccaccacaccggagttcaaaacttcatccaaatcaaaaagttttcacggttttaggcatcctttttt 8402066  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    |||||||||||||||||||||||||||||||    
T  8402065 gtgttgattccaaatattgccttagatttct 8402035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 179817 - 179947
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||  || ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  179817 atgatgatttcggcgcgatggccggtggtggcaccaccgcgccggagttcaaaactccatccaaatcaaaaagttttcacggttttagacatcctttttt 179916  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    ||||||||| ||||||| | |||||||||||    
T  179917 gtgttgatttcaaatatcgtcttagatttct 179947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 30802828 - 30802936
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  30802828 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttaaagggatttatggctgggaaactgctggaaaccattaagtacatct 30802927  T
Q  520 aatgatttt 528  Q
    |||||||||    
T  30802928 aatgatttt 30802936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 45890152 - 45890260
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  45890152 gttcacgatttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatcgctgggaaactgctggaaaccattaagtacatct 45890251  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  45890252 aatggtttt 45890260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 23319567 - 23319459
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  23319567 gttcatggtttcagatctgaagttgttactggattcgaaatctttgtgatgttttagggatttatggctgggaaactgctggaaaccattaagtacatct 23319468  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  23319467 aatggtttt 23319459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 22348262 - 22348376
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaa 114  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||||  ||||||||    
T  22348262 gcggtggccggtggtggcaccactgcgtcggagttcaaaactccgtccaaatcaaaatgttttcacggttttagacatc--attttgtgtcaattccaaa 22348359  T
Q  115 tattgccttagatttct 131  Q
    ||| |||||||||||||    
T  22348360 tatcgccttagatttct 22348376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 18057344 - 18057452
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||||||| |||| | |||||| |||||||||||||||||||||    
T  18057344 gttcacggtttcagatctgaagttgttactggattcgaaatctctgcgatgttagagggatttatggctagaaaactgttggaaaccattaagtacatct 18057443  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  18057444 aatggtttt 18057452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 493 - 567
Target Start/End: Complemental strand, 4097361 - 4097287
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  4097361 aactgctggaaaccattaagtacatctaatgattttccacaacaaaattgttttggcattccggtacggtgatga 4097287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 478 - 567
Target Start/End: Original strand, 11422200 - 11422289
Alignment:
Q  478 gatttacggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||| |||||||    
T  11422200 gatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccgatacagtgatga 11422289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 495 - 567
Target Start/End: Original strand, 34370315 - 34370387
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  34370315 ctgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatga 34370387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 493 - 567
Target Start/End: Complemental strand, 23174942 - 23174868
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||    
T  23174942 aactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcatttcggtacggtgatga 23174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 493 - 567
Target Start/End: Original strand, 180365 - 180439
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||    
T  180365 aactgctgaaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacagtgatga 180439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 13463870 - 13463828
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactc 57  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  13463870 gcggtggccggtggtggcaccaccgcgccggagttcaaaactc 13463828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 478 - 528
Target Start/End: Original strand, 34370255 - 34370305
Alignment:
Q  478 gatttacggctgggaaactgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  34370255 gatttatggctgggaaactgctggaaactattaagtacatctaatggtttt 34370305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 23174635 - 23174594
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  23174635 tttccacaacaaaatggttttggcattccggtacggtgatga 23174594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 528
Target Start/End: Complemental strand, 23319451 - 23319416
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||||||||    
T  23319451 aactgctggaaaccattaagtacatctaatgatttt 23319416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 18057552 - 18057585
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||||||    
T  18057552 ctgctggaaaccattaagtacatctaatgatttt 18057585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 23174766 - 23174725
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  23174766 tttccacaacaaaatggttttggcattccgatacggtgatga 23174725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 31084158 - 31084191
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||||||    
T  31084158 ctgctggaaaccattaagtacatctaatgatttt 31084191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 528
Target Start/End: Complemental strand, 4097421 - 4097369
Alignment:
Q  476 gggatttacggctgggaaactgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||| |||||||||| || ||||||| ||||||||||||||||| ||||    
T  4097421 gggatttatggctgggaaattgatggaaactattaagtacatctaatggtttt 4097369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 14229276 - 14229244
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  14229276 tgctggaaaccattaagtacatctaatgatttt 14229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 46590662 - 46590630
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  46590662 tgctggaaaccattaagtacatctaatgatttt 46590630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 18597131 - 18597088
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  18597131 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 18597088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 18750240 - 18750197
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  18750240 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 18750197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 180526 - 180567
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||  ||||||||||| ||||||||||||||||||||    
T  180526 tttccacagaaaaatggttttggcattccggtacggtgatga 180567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 10498009 - 10498042
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||| ||||||||||||||||||||||||||||    
T  10498009 ctgctagaaaccattaagtacatctaatgatttt 10498042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 528
Target Start/End: Complemental strand, 23174999 - 23174950
Alignment:
Q  479 atttacggctgggaaactgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||| ||||| |||| ||||||||||||||||||| |||||||| ||||    
T  23174999 atttatggctgcgaaattgctggaaaccattaagtatatctaatggtttt 23174950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Complemental strand, 23319316 - 23319283
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  23319316 ctgctggaaaccattaagtacatctaatggtttt 23319283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 528
Target Start/End: Complemental strand, 35197497 - 35197468
Alignment:
Q  499 tggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||    
T  35197497 tggaaaccattaagtacatctaatgatttt 35197468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 528
Target Start/End: Complemental strand, 42134045 - 42134016
Alignment:
Q  499 tggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||    
T  42134045 tggaaaccattaagtacatctaatgatttt 42134016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 45890360 - 45890393
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    |||| |||||||||||||||||||||||||||||    
T  45890360 ctgccggaaaccattaagtacatctaatgatttt 45890393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 6708457 - 6708489
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||| |||||    
T  6708457 tgctggaaaccattaagtacatctaattatttt 6708489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 14389984 - 14390016
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  14389984 tgctggaaaccattaagtacatctaatggtttt 14390016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 17811223 - 17811255
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  17811223 tgctggaaaccattaagtacatctaatggtttt 17811255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 18928897 - 18928929
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  18928897 tgctggaaaccattaagtacatctaatggtttt 18928929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 32143672 - 32143640
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||| ||||||||||||||||||||||||||||    
T  32143672 tgctagaaaccattaagtacatctaatgatttt 32143640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 45849212 - 45849180
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  45849212 tgctggaaaccattaagtacatctaatggtttt 45849180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 47693770 - 47693738
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  47693770 tgctggaaaccattaagtacatctaatggtttt 47693738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 293; Significance: 1e-164; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 196 - 567
Target Start/End: Original strand, 50754410 - 50754782
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  50754410 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatctggttca 50754509  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||| | |||||||||||||||| ||||||| |||| ||||||||||||     
T  50754510 aatcttgttgtggtaggctgtacaaactctccctctacctcttctaaaccgattctagatttattgatgaattcgagagtgatagaggatgtttatgtga 50754609  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||||    
T  50754610 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttatagggatttatggctgggaaa 50754709  T
Q  495 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  50754710 ctgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatga 50754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 196 - 567
Target Start/End: Complemental strand, 52987310 - 52986947
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  52987310 ctacctcttgttcttcacggatctgtttcgcgttttggtcttcttctcggatccggttcggatttgttgttgtgttcaagtgttgttccgatccggttcg 52987211  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||||||  | |||||||||||||||||||||||||||||||     
T  52987210 aatcttgttgtggtaggttgtacgaactctccctctacctcttctaaaccgattctggatttataaacgaatttgagagtggtagatgatgtttatgtga 52987111  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    |||||||||||||||||         ||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||| ||||||||||    
T  52987110 ttttctgtggtttagtg---------ttcacggtttcagatctgaagttgttattggattcgaaatctttgcgatgttagagggatttatggctgggaaa 52987020  T
Q  495 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    || |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  52987019 ctactggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatga 52986947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 196 - 567
Target Start/End: Original strand, 31852514 - 31852891
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||     
T  31852514 ctacctcttgttcttcacagatccgtttcgcgttttggtcttcttctccgatccggttcagatttgt-gttgtgttgaagtgttgtttcgatccggttca 31852612  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggattt------------attgatgaatttgagagtggtagatg 382  Q
    ||| ||||||| ||     ||  ||||||||||||||||||||||||  ||||| ||||| |            ||||||||||| ||||| ||||||||    
T  31852613 aatcttgttgttgt-----gtt-gaactctccctctacctcttctaaaccgattctggatattcttctggatctattgatgaattcgagaggggtagatg 31852706  T
Q  383 atgtttatgtggttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggattt 482  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  31852707 atgtttatgtgattttctgtggtttagtgttcatgaggttcacggttttagatctgaagttgttattggaatcaaaatctttgtgatgttagagggattt 31852806  T
Q  483 acggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    | ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  31852807 atggctgggaaactgttggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatga 31852891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 50754213 - 50754343
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| || || ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50754213 atgatgattccggcgcagtggccggtggtgacaccaccgcaccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 50754312  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    ||||||||||||||||| |||||||||||||    
T  50754313 gtgttgattccaaatatcgccttagatttct 50754343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 52987506 - 52987376
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| || ||||||| |||||||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  52987506 atgatgattccggcgcggtggtcggtggtggcaccaccgcgccggagttcaaaactgcatccaaatcaaaaagtttttacggttttagacatcctttttt 52987407  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    |||||||||||||||||||||||||||||||    
T  52987406 gtgttgattccaaatattgccttagatttct 52987376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 31852329 - 31852445
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaa 114  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31852329 gcggtggccggtggtggcaccactgcgctggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaa 31852428  T
Q  115 tattgccttagatttct 131  Q
    ||| | |||||||||||    
T  31852429 tatcgtcttagatttct 31852445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 51362022 - 51361914
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  51362022 gttcacggtttcagatatgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctggaaaactgctggaaaccattaagtacatct 51361923  T
Q  520 aatgatttt 528  Q
    |||||||||    
T  51361922 aatgatttt 51361914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 7044878 - 7044770
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7044878 gttcacggtttcagatctgaagttgttactggattcgaaatctttgttatgttagagggatttatggcagggaaactgctggaaaccattaagtacatct 7044779  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  7044778 aatggtttt 7044770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 8718662 - 8718770
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  8718662 gttcacggtttcagatctgaagttgttattggattcaaaaactttgtgatgttagagggatttatggctgggaaactactggaaaccattaagtacatct 8718761  T
Q  520 aatgatttt 528  Q
    ||| |||||    
T  8718762 aataatttt 8718770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 9070549 - 9070657
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  9070549 gttcacggtttcagatctgaagttgttattggattcaaaaactttgtgatgttagagggatttatggctgggaaactactggaaaccattaagtacatct 9070648  T
Q  520 aatgatttt 528  Q
    ||| |||||    
T  9070649 aataatttt 9070657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 420 - 522
Target Start/End: Complemental strand, 16277055 - 16276953
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  16277055 gttcacggttttagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggccgggaaactgctggaaaccattaagtacatct 16276956  T
Q  520 aat 522  Q
    |||    
T  16276955 aat 16276953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 19384905 - 19384797
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||| || ||||||||||||||||||||||||||| ||||    
T  19384905 gttcacagtttaagatctgaagttgttactagattcaaaatctttgtgatgttagaggaatttatggttgggaaactgctggaaaccattaagtatatct 19384806  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  19384805 aatggtttt 19384797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 493 - 560
Target Start/End: Complemental strand, 51361906 - 51361839
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacg 560  Q
    ||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  51361906 aactgttggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacg 51361839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 501 - 567
Target Start/End: Complemental strand, 7044755 - 7044689
Alignment:
Q  501 gaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||    
T  7044755 gaaaccattaagtacatctaatggttttccatagcaaaatggttttggcattccggtacggtgatga 7044689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 493 - 567
Target Start/End: Complemental strand, 19384789 - 19384715
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||| || ||| |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||    
T  19384789 aactgttgaaaatcattaagtacatctaatggttttacacaataaaatggttttggcattccggtacggtgatga 19384715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 51361746 - 51361705
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  51361746 tttccacaacaaaatggttttggcattccggtacggtgatga 51361705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 13603391 - 13603476
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| ||||||||| |||||||||||| ||  |||||||| |||||||||||| | || ||| ||||| ||||||||||||    
T  13603391 gcggtggccgatggtggcaccaccgcgccggagttttcaaactccg-ccaaatcaaaaattatttacgtttttaaacatcctttttt 13603476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 528
Target Start/End: Original strand, 47728923 - 47728959
Alignment:
Q  492 aaactgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47728923 aaactgctggaaaccattaagtacatctaatggtttt 47728959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 1005756 - 1005799
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  1005756 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 1005799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 2216567 - 2216653
Alignment:
Q  12 ggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    ||||||||||||||||||||| | ||||||||||||||  ||||||| ||| | ||||||| |||| |   ||||| |||||||||||    
T  2216567 ggtgcggtggccggtggtggcgccaccgcgccggagtttcaaactcc-tccgattcaaaaactttttatatttttaaacatccttttt 2216653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 4444389 - 4444346
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  4444389 gcggtggccggcggtggcaccaccacgccggagttcaaaactcc 4444346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 528
Target Start/End: Original strand, 8718874 - 8718903
Alignment:
Q  499 tggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||    
T  8718874 tggaaaccattaagtacatctaatgatttt 8718903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 528
Target Start/End: Original strand, 9070761 - 9070790
Alignment:
Q  499 tggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||    
T  9070761 tggaaaccattaagtacatctaatgatttt 9070790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 11262296 - 11262380
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgcc-ggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    |||||||||||||||||| | |||||||| ||||||  ||||||| ||| | ||||||| |||| ||| ||||| |||||||||||    
T  11262296 gcggtggccggtggtggcgccaccgcgccgggagttttaaactcc-tccgattcaaaaactttttacgtttttaaacatccttttt 11262380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 537
Target Start/End: Complemental strand, 12974116 - 12974075
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgattttccacaacaa 537  Q
    ||||||||||||||||||||||| ||||||||| || |||||    
T  12974116 tgctggaaaccattaagtacatcgaatgattttgcagaacaa 12974075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 23756030 - 23756063
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  23756030 ctgctggaaaccattaagtacatctaatggtttt 23756063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Complemental strand, 34562687 - 34562654
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  34562687 ctgctggaaaccattaagtacatctaatggtttt 34562654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Complemental strand, 41191697 - 41191664
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||| |||||||||||||||||    
T  41191697 ctgctggaaaccattatgtacatctaatgatttt 41191664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 52986857 - 52986816
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||  ||||||||||| ||||||||||||||||||||    
T  52986857 tttccacagtaaaatggttttggcattccggtacggtgatga 52986816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 8036904 - 8036872
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  8036904 tgctggaaaccattaagtacatctaatggtttt 8036872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 16289587 - 16289504
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    |||||||||||||||||| | ||||||||||||||  ||| ||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  16289587 gcggtggccggtggtggcgccaccgcgccggagttttaaagtcc-tccgattcaaaaactttttacatttttaaacatccttttt 16289504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 21175208 - 21175240
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  21175208 tgctggaaaccattaagtacatctaatggtttt 21175240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 36185830 - 36185798
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  36185830 tgctggaaaccattaagtacatctaatggtttt 36185798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 281; Significance: 1e-157; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 196 - 567
Target Start/End: Complemental strand, 2826719 - 2826347
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2826719 ctacctcttgttcttcacggacccatttcacgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 2826620  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| |||| |||||||| |||||||||||||||||||||||||||||   ||||||||||||||||| ||||| |||||||||||||||||||||||||     
T  2826619 aatcttgtcgtggtaggttgtacgaactctccctctacctcttctaaactgattatggatttattgacgaattcgagagtggtagatgatgtttatgtga 2826520  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  2826519 ttttctatggtttagtgttcatgaggttcacggttttagatctgaagttgttactggattcaaaatctttgtgatgttagagggatttatggctgggaaa 2826420  T
Q  495 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||| ||||||||||||||||||||||||  ||||||||| |||||||||||| ||||||||||||||||||||    
T  2826419 ctgttggaaaccattaagtacatctaatcgttttccacagcaaaatggttttggcattccggtacggtgatga 2826347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 34329520 - 34329648
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34329520 ctacatcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatctggttcg 34329619  T
Q  295 aattttgttgtggtaggctgtacgaactc 323  Q
    ||| ||||||||||||| |||||||||||    
T  34329620 aatcttgttgtggtaggttgtacgaactc 34329648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 421 - 528
Target Start/End: Complemental strand, 25016745 - 25016638
Alignment:
Q  421 ttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatcta 520  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  25016745 ttcacagtttcagatctgaagttgttactggattcgaaatctttgtgatgttagaggaatttatggctgggaaactgctggaaaccattaagtacatcta 25016646  T
Q  521 atgatttt 528  Q
    ||||||||    
T  25016645 atgatttt 25016638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 42512544 - 42512652
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  42512544 gttcacggtttcatatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgctcgaaaccattaagtacatct 42512643  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  42512644 aatggtttt 42512652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 2826922 - 2826792
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| |  || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||    
T  2826922 atgatgattccgacgcagtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaaaaaattacggttttagacatcctttttt 2826823  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    ||||||||| ||||||| |||||||||||||    
T  2826822 gtgttgatttcaaatatcgccttagatttct 2826792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 420 - 522
Target Start/End: Original strand, 13363330 - 13363432
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  13363330 gttcacggtttcagatctgaagttgttattggattcgaaatctttgtgatgttagagggatttatggctgggaaactactggaaaccattaagtacatct 13363429  T
Q  520 aat 522  Q
    |||    
T  13363430 aat 13363432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 34329350 - 34329489
Alignment:
Q  27 ggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttaga 126  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||    
T  34329350 ggtggtaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggtttcaaacatccttttttgtgttgattccaaatatcgtcttaga 34329449  T
Q  127 tttctnnnnnnnnnnctcacacgagcgtagatctatgagt 166  Q
    |||||          |||||||||||||||||||| ||||    
T  34329450 tttctcaaaaaaaaactcacacgagcgtagatctacgagt 34329489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 23335216 - 23335109
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  23335216 gttcacggtttcagatctgaagttgaaactggattcaaaatctttgtgatgttagagggatttatggctgggaaac-gctggaaaccattaagtacatct 23335118  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  23335117 aatggtttt 23335109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 421 - 528
Target Start/End: Complemental strand, 28069754 - 28069647
Alignment:
Q  421 ttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatcta 520  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  28069754 ttcacggtttcagatctgaagttgttactggattcgaaatcttttttatgttagagggatttatggatgggaaactgctggaaactattaagtacatcta 28069655  T
Q  521 atgatttt 528  Q
    ||| ||||    
T  28069654 atggtttt 28069647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 437
Target Start/End: Original strand, 34329690 - 34329780
Alignment:
Q  347 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtggttttctgtggtttagtgttcatgaggttcacggtttcagatct 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  34329690 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcattcggttcacggtttcagatct 34329780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 493 - 567
Target Start/End: Complemental strand, 28069639 - 28069565
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||    
T  28069639 aactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccagtacggtgatga 28069565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 493 - 567
Target Start/End: Original strand, 34329826 - 34329900
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||| |||||||||||||    
T  34329826 aactgctggaaaccattaagtacatctaatggttttccaaagcaaaatggttttggcattctggtacggtgatga 34329900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 23568507 - 23568465
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactc 57  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  23568507 gcggtggccggtggtggcatcaccgcgccggagttcaaaactc 23568465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 2826257 - 2826216
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  2826257 tttccacagcaaaatggttttggcattccggtacggtgatga 2826216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 495 - 528
Target Start/End: Complemental strand, 25016538 - 25016505
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||||||    
T  25016538 ctgctggaaaccattaagtacatctaatgatttt 25016505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 34330002 - 34330043
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  34330002 tttccacagcaaaatggttttggcattccggtacggtgatga 34330043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 703834 - 703802
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  703834 tgctggaaaccattaagtacatctaatgatttt 703802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 4951165 - 4951197
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  4951165 tgctggaaaccattaagtacatctaatgatttt 4951197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 11376485 - 11376453
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  11376485 tgctggaaaccattaagtacatctaatgatttt 11376453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 20134303 - 20134271
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  20134303 tgctggaaaccattaagtacatctaatgatttt 20134271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 29189288 - 29189248
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaac 55  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  29189288 gcggtggccggtggtggcaccaccgcgcctgagttcaaaac 29189248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 528
Target Start/End: Complemental strand, 18464659 - 18464628
Alignment:
Q  497 gctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||||    
T  18464659 gctggaaaccattaagtacatctaatgatttt 18464628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 31549542 - 31549585
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  31549542 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 31549585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 528
Target Start/End: Original strand, 13363540 - 13363570
Alignment:
Q  498 ctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||    
T  13363540 ctggaaaccattaagtacatctaatgatttt 13363570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 522
Target Start/End: Complemental strand, 16552487 - 16552457
Alignment:
Q  492 aaactgctggaaaccattaagtacatctaat 522  Q
    |||||||||||||||||||||||||||||||    
T  16552487 aaactgctggaaaccattaagtacatctaat 16552457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 31411848 - 31411810
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaa 53  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  31411848 gcggtggccggtggtggcaccaccgcaccggagttcaaa 31411810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 31422756 - 31422718
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaa 53  Q
    |||||||||||||||||||| || |||||||||||||||    
T  31422756 gcggtggccggtggtggcaccactgcgccggagttcaaa 31422718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Complemental strand, 23335011 - 23334978
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  23335011 ctgctggaaaccattaagtacatctaatggtttt 23334978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 3340719 - 3340751
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  3340719 tgctggaaaccattaagtacatctaatggtttt 3340751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 5630211 - 5630243
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  5630211 tgctggaaaccattaagtacatctaatggtttt 5630243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 7286894 - 7286926
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  7286894 tgctggaaaccattaagtacatctaatggtttt 7286926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 11660897 - 11660865
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  11660897 tgctggaaaccattaagtacatctaatggtttt 11660865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 528
Target Start/End: Original strand, 34329782 - 34329818
Alignment:
Q  492 aaactgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  34329782 aaactgttggaaaccattaagtacatctaatggtttt 34329818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 36864208 - 36864240
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||| |||||||||||||    
T  36864208 tgctggaaaccattaagtatatctaatgatttt 36864240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 39861683 - 39861651
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  39861683 tgctggaaaccattaagtacatctaatggtttt 39861651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 211 - 567
Target Start/End: Complemental strand, 39658245 - 39657890
Alignment:
Q  211 cacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcgaattttgttgtggta 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  39658245 cacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcgaatcttgttgtggta 39658146  T
Q  310 ggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtggttttctgtggtttag 409  Q
    |||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  39658145 ggctgtacaaactctccctctacctcttctaaa-cgattatgaatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttag 39658047  T
Q  410 tgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccatt 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||    
T  39658046 tgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgcttgaaaccatt 39657947  T
Q  510 aagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||||||||| ||||||||| ||||||  |||| ||||||||||||||||||||    
T  39657946 aagtacatctaatggttttccacagcaaaat-tttttggcattccggtacggtgatga 39657890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 196 - 567
Target Start/End: Complemental strand, 4836359 - 4835987
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4836359 ctacctcttgttcttcacggattcgtttcgtgttttggtcttcttctccgatctggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 4836260  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| ||||||||||||||||||||||||||||   ||||||||||||  ||||| |||||||||||| ||||| |||||||||||||||||||||||||     
T  4836259 aatcttgttgtggtaggctgtacgaactctccgcgtacctcttctaaaccgattctggatttattgacgaattcgagagtggtagatgatgtttatgtga 4836160  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    |||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||    
T  4836159 ttttatgtggtttagtgttcatgaggatcacagtttcaaatctgaagttgttactggattcgaaatctttgtgatattagagggatttatggctgggaaa 4836060  T
Q  495 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  4836059 ctgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatga 4835987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 196 - 567
Target Start/End: Complemental strand, 4841804 - 4841432
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4841804 ctacctcttgttcttcacggattcgtttcgtgttttggtcttcttctccgatctggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 4841705  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| ||||||||||||||||||||||||||||   ||||||||||||  ||||| |||||||||||| ||||| |||||||||||||||||||||||||     
T  4841704 aatcttgttgtggtaggctgtacgaactctccgcgtacctcttctaaaccgattctggatttattgacgaattcgagagtggtagatgatgtttatgtga 4841605  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    |||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||    
T  4841604 ttttatgtggtttagtgttcatgaggatcacagtttcaaatctgaagttgttactggattcgaaatctttgtgatattagagggatttatggctgggaaa 4841505  T
Q  495 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  4841504 ctgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatga 4841432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 196 - 528
Target Start/End: Original strand, 7058510 - 7058843
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatcgg-ttcg 294  Q
    ||||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | || |    
T  7058510 ctacctcttgttcttcacgaattcgtttcgtgttttggttttcttctccgatccggttcggatttgttgttgtgttgaaatgttgttccgatccgatttg 7058609  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||||     
T  7058610 aatcttgttgtggtatgctgtacgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtggtagatgatgtttatgtga 7058709  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || |||||||    
T  7058710 ttttatgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggttgggaaa 7058809  T
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  7058810 ctgctggaaaccattaagtacatctaatggtttt 7058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 196 - 528
Target Start/End: Original strand, 2750427 - 2750760
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    ||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2750427 ctacctcctgttcttcacagatccgtttcacattttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 2750526  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| ||||||||||||| |||| ||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||| |||||||||||||||||     
T  2750527 aatcttgttgtggtaggttgtatgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtgatagatgatgtttatgtga 2750626  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||| |||||| |||    
T  2750627 ttttatgtggtttagtgtttatgatgttcacggtttcagatctgaagtttttacttgattcgaaatctttgtgatgttagagggatttatggctggaaaa 2750726  T
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  2750727 ctgctggaaaccattaagtacatctaatggtttt 2750760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 196 - 354
Target Start/End: Original strand, 8550903 - 8551062
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 294  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  8550903 ctacctcttgttcttcacggatctgtttcgcgttttggtcttcttctccgatccggttcagatttgttgttgtgttgaagtgttgttccgatccggttcg 8551002  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 354  Q
    ||| ||||||||||||| ||||||||||||||||||||||||| |||  ||||| |||||    
T  8551003 aatcttgttgtggtaggttgtacgaactctccctctacctcttataaaccgattctggat 8551062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 4836557 - 4836427
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| || | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4836557 atgatgattccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 4836458  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    | |||||||||||||||||||||| ||||||    
T  4836457 gcgttgattccaaatattgccttaaatttct 4836427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 4842002 - 4841872
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| || | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4842002 atgatgattccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 4841903  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    | |||||||||||||||||||||| ||||||    
T  4841902 gcgttgattccaaatattgccttaaatttct 4841872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 2750248 - 2750364
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaa 114  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2750248 gcggtggccggtggtggaaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcatggttttagacatccttttttgtgttgattccaaa 2750347  T
Q  115 tattgccttagatttct 131  Q
    ||| |||||||||||||    
T  2750348 tatcgccttagatttct 2750364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 1209110 - 1209259
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggat---ttgttgttgtgttgaagtgttgttccgat-cggt 291  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||   |||||||||||||||| |||||||||||| ||||    
T  1209110 ctacctcttgttcttcatggatccgtttcgcgttttggtcttcttctctgatccagttcggatttgttgttgttgtgttgaaatgttgttccgatccggt 1209209  T
Q  292 tcgaattttgttgtggtaggctgtacgaactctccctctacctcttctaa 341  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||||||||    
T  1209210 tcgaatcttgttgtggtagtctgtacgaactctccttgtacctcttctaa 1209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 39658399 - 39658269
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| ||  ||| |||||  |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39658399 atgatgattccggcacggcggccgccggtgtcaccaccgcgccggagttcaaaactccgtccgaatcaaaaagttttcacggttttagacatcctttttt 39658300  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    ||||||||||||||||| |||||||||||||    
T  39658299 gtgttgattccaaatatcgccttagatttct 39658269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 7614500 - 7614608
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7614500 gttcacggtttcagatctgaagttgttattggattcgaaatttttgtaatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 7614599  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  7614600 aatggtttt 7614608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 39022525 - 39022633
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||| ||||||| |||||| ||||| ||| ||||||||||||||||||    
T  39022525 gttcacggtttcagatatgaagttgttactggattcgaaatctttgtgatgttagatggatttatggctggaaaactactgaaaaccattaagtacatct 39022624  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  39022625 aatggtttt 39022633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 347 - 440
Target Start/End: Original strand, 1209352 - 1209445
Alignment:
Q  347 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtggttttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 440  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| |||||||||    
T  1209352 ttatggattttttgatgaattcgagagtggtagatgatgtttatgtgattttctatggtttagtgttcatgaggttcacagttttagatctgaa 1209445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 8550728 - 8550837
Alignment:
Q  23 cggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagtt-ttcacggttttagacatccttttttgtgttgattccaaatattgcc 121  Q
    ||||||||| || ||||||||||||||||||||||||||||||| |||||    |||||||||||||||||| |||||||||||||||||||||||  ||    
T  8550728 cggtggtggtaccaccgcgccggagttcaaaactccgtccaaataaaaaaaaaattcacggttttagacatctttttttgtgttgattccaaatatcacc 8550827  T
Q  122 ttagatttct 131  Q
    ||||||||||    
T  8550828 ttagatttct 8550837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 7058348 - 7058442
Alignment:
Q  36 accgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttagatttct 131  Q
    ||||||||||||||||||||||||||||||| |||||   | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7058348 accgcgccggagttcaaaactccgtccaaataaaaaaaaat-cacgattttagacatccttttttgtgttgattccaaatatcgccttagatttct 7058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 491 - 566
Target Start/End: Original strand, 1209443 - 1209518
Alignment:
Q  491 gaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatg 566  Q
    |||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  1209443 gaaactgctgaaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatg 1209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 1208934 - 1209039
Alignment:
Q  27 ggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagtt-ttcacggttttagacatccttttttgtgttgattccaaatattgccttag 125  Q
    |||||||| || || | ||||||||||||||||||||||| |||||    |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  1208934 ggtggcaccactgctctggagttcaaaactccgtccaaataaaaaaaaaattcatggttttagacatccttttttgtgttgattccaaatatcgccttag 1209033  T
Q  126 atttct 131  Q
    ||||||    
T  1209034 atttct 1209039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 495 - 567
Target Start/End: Original strand, 8551103 - 8551175
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  8551103 ctgctgaaaatcattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatga 8551175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 493 - 567
Target Start/End: Original strand, 7058851 - 7058925
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||| ||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||    
T  7058851 aactgttggaaaccattaagtacatctaatggttttccacaggaaaatggttttggcattccggtacggtgatga 7058925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 420 - 521
Target Start/End: Complemental strand, 15260367 - 15260266
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    ||||||||||||| ||||||||||||||||  |||| |||||||| ||||||| ||||| ||||  |||| |||||| |||||||||| |||||||||||    
T  15260367 gttcacggtttcatatctgaagttgttactatattcgaaatctttgtgatgttggaggggtttatagctgagaaactactggaaaccactaagtacatct 15260268  T
Q  520 aa 521  Q
    ||    
T  15260267 aa 15260266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 493 - 567
Target Start/End: Original strand, 2750768 - 2750842
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||| |||||||    
T  2750768 aactgctgcaaaccattaagtacatctaatggttttccacatcaaaatggttttgacattccggtactgtgatga 2750842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 4838725 - 4838769
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccg 59  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  4838725 gcggtggccggtggtggcaccaccgcgccggagttcaaaactccg 4838769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 464
Target Start/End: Complemental strand, 32986968 - 32986924
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatcttt 464  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  32986968 gttcacggtttcagatctgaagttgttactggattcgaaatcttt 32986924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 36577978 - 36578020
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactc 57  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  36577978 gcggtggccggtggtggcaccaccgcgccggagttcaaaactc 36578020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 26872669 - 26872707
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaa 53  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26872669 gcggtggccggtggtggcaccaccgcgccggagttcaaa 26872707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 26875127 - 26875165
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaa 53  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26875127 gcggtggccggtggtggcaccaccgcgccggagttcaaa 26875165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 2751065 - 2751106
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  2751065 tttccacagcaaaatggttttagcattccggtacggtgatga 2751106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 526 - 566
Target Start/End: Original strand, 1209609 - 1209649
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatg 566  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  1209609 tttccacagcaaaatggttttggcattccggtacggtgatg 1209649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 23504597 - 23504565
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  23504597 tgctggaaaccattaagtacatctaatgatttt 23504565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 23091596 - 23091553
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  23091596 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 23091553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 2750889 - 2750930
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| ||||||||||||| ||||||||||| |||||||    
T  2750889 tttccacagcaaaatggttttttcattccggtactgtgatga 2750930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 2750977 - 2751018
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| ||||||||||||| ||||||||||| |||||||    
T  2750977 tttccacagcaaaatggttttttcattccggtactgtgatga 2751018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 23397199 - 23397232
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  23397199 ctgctggaaaccattaagtacatctaatggtttt 23397232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 566
Target Start/End: Complemental strand, 4835897 - 4835857
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatg 566  Q
    ||||||||  ||||||||||| |||||||||||||||||||    
T  4835897 tttccacagaaaaatggttttggcattccggtacggtgatg 4835857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 566
Target Start/End: Complemental strand, 4841342 - 4841302
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatg 566  Q
    ||||||||  ||||||||||| |||||||||||||||||||    
T  4841342 tttccacagaaaaatggttttggcattccggtacggtgatg 4841302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 15809780 - 15809812
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  15809780 tgctggaaaccattaagtacatctaatggtttt 15809812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 23567583 - 23567615
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||| |||||||||||||||||||||||||||    
T  23567583 tgctgaaaaccattaagtacatctaatgatttt 23567615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 24472985 - 24472953
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  24472985 tgctggaaaccattaagtacatctaatggtttt 24472953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 27506810 - 27506778
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  27506810 tgctggaaaccattaagtacatctaatggtttt 27506778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 34343391 - 34343423
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  34343391 tgctggaaaccattaagtacatctaatggtttt 34343423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 35448550 - 35448582
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||| |||||    
T  35448550 tgctggaaaccattaagtacatctaataatttt 35448582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 523
Target Start/End: Original strand, 39022733 - 39022761
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatg 523  Q
    |||||||||||||||||||||||||||||    
T  39022733 ctgctggaaaccattaagtacatctaatg 39022761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 45409510 - 45409478
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  45409510 tgctggaaaccattaagtacatctaatggtttt 45409478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 196 - 528
Target Start/End: Complemental strand, 15974598 - 15974265
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15974598 ctacctcttgttcttcacggatccatttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatctggttcg 15974499  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||||     
T  15974498 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtggtagatgatgtttatgtga 15974399  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||| ||||||||||    
T  15974398 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggatttgaaatctttgtgatgttagatggatttatggctgggaaa 15974299  T
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||||||    
T  15974298 ctgctggaaaccattaagtacatctaatgatttt 15974265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 48305629 - 48305776
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48305629 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctctgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 48305728  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaac 342  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48305729 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaac 48305776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 48691388 - 48691513
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48691388 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgattcggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 48691487  T
Q  295 aattttgttgtggtaggctgtacgaa 320  Q
    ||| ||||||| ||||||||||||||    
T  48691488 aatcttgttgttgtaggctgtacgaa 48691513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 15974792 - 15974663
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||   || ||||||||||||||||||||||    
T  15974792 atgatgattccggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaataaaaaaaaatt-acggttttagacatcctttttt 15974694  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    ||||||||||||||||| |||||||||||||    
T  15974693 gtgttgattccaaatatcgccttagatttct 15974663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 30430266 - 30430374
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    ||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  30430266 gttcacggtttcagagctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggttgggaaactgttggaaaccattaagtacatct 30430365  T
Q  520 aatgatttt 528  Q
    |||||||||    
T  30430366 aatgatttt 30430374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 48305437 - 48305565
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| ||  ||| |||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  48305437 atgatgattccggcacggcggccgtcggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcc--tttt 48305534  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    ||||||||||||||||| | |||||||||||    
T  48305535 gtgttgattccaaatatcgtcttagatttct 48305565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 347 - 440
Target Start/End: Original strand, 48305867 - 48305960
Alignment:
Q  347 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtggttttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 440  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48305867 ttatggattttttgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 48305960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 33798359 - 33798467
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||    
T  33798359 gttcacggtttcagatctgaagttgttactggattcgaaatttttgtgatgttagagagatttatggctggaaaactgctggaaaccattaagtatatct 33798458  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  33798459 aatggtttt 33798467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 46024586 - 46024693
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  46024586 gttcacggttttagatctgaagttgttactggattcaaaatctttgtgatgttagagggatttatggct-ggaaactcccggaaaccattaagtacatct 46024684  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  46024685 aatggtttt 46024693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 48691193 - 48691323
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| ||  ||| |||||  |||||||| ||||| |  || ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48691193 atgatgattccggcacggcggccgccggtggcaccaccgcactagatttcaaaactccgttcaaatcaaaaagttttcacggttttagacatcctttttt 48691292  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    ||||||||| ||||||| |||||||||||||    
T  48691293 gtgttgatttcaaatatcgccttagatttct 48691323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 420 - 521
Target Start/End: Complemental strand, 46573080 - 46572980
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||| | ||||||||||||||    
T  46573080 gttcacggtttcagatctgaagttgttactg-attcaaaatctttgtgatgttagagggatttatggctaggaaactgctggagatcattaagtacatct 46572982  T
Q  520 aa 521  Q
    ||    
T  46572981 aa 46572980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 350 - 440
Target Start/End: Original strand, 48691561 - 48691651
Alignment:
Q  350 tggatttattgatgaatttgagagtggtagatgatgtttatgtggttttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 440  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  48691561 tggatttattgatgaattcgagagtggtagataatgtttatgtgattttctgtggtttagtgttcatgaggctcacgatttcagatctgaa 48691651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 493 - 567
Target Start/End: Complemental strand, 15974257 - 15974183
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||    
T  15974257 aactgctggaaaccattaagtacatctaatggttttccacggcaaaatggttttggcattccggtacggtgatga 15974183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 493 - 567
Target Start/End: Complemental strand, 46572965 - 46572891
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||    
T  46572965 aactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccagtacggtgatga 46572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 567
Target Start/End: Original strand, 48691700 - 48691768
Alignment:
Q  499 tggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  48691700 tggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatga 48691768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 493 - 567
Target Start/End: Original strand, 48306003 - 48306077
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| |||||| |||||||||||||    
T  48306003 aactgttggaaaccattaagtacatctaacggttttccacagcaaaatggttttggcattctggtacggtgatga 48306077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 46572807 - 46572766
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  46572807 tttccacaacaaaatggttttggcattccggtacggtgatga 46572766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 15974093 - 15974052
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  15974093 tttccacagcaaaatggttttggcattccggtacggtgatga 15974052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 559892 - 559935
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  559892 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 559935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 569801 - 569844
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  569801 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 569844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 4185218 - 4185175
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  4185218 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 4185175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 5200608 - 5200651
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  5200608 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 5200651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 5209737 - 5209780
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  5209737 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 5209780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 17515799 - 17515842
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  17515799 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 17515842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 17537415 - 17537372
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  17537415 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 17537372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 27967395 - 27967438
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  27967395 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 27967438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 27976848 - 27976891
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  27976848 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 27976891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28396923 - 28396986
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaa 64  Q
    |||||||||| ||  ||| |||||  |||||||| |||||||||||||||||||| ||||||||    
T  28396923 atgatgattccggcacggcggccgccggtggcaccaccgcgccggagttcaaaaccccgtccaa 28396986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 528
Target Start/End: Original strand, 33798475 - 33798510
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33798475 aactgctggaaaccattaagtacatctaatggtttt 33798510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 38411820 - 38411786
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagtt 49  Q
    |||||||||||||||||||| ||||||||||||||    
T  38411820 gcggtggccggtggtggcaccaccgcgccggagtt 38411786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 24360521 - 24360554
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  24360521 ctgctggaaaccattaagtacatctaatggtttt 24360554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 32091287 - 32091320
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  32091287 ctgctggaaaccattaagtacatctaatggtttt 32091320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 46024793 - 46024826
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  46024793 ctgctggaaaccattaagtacatctaatggtttt 46024826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Original strand, 48305958 - 48305995
Alignment:
Q  491 gaaactgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  48305958 gaaactgctggaaaccattaagtatatctaatggtttt 48305995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 48691861 - 48691902
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| ||||||||||||  |||||||||||||||||||    
T  48691861 tttccacagcaaaatggttttgacattccggtacggtgatga 48691902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 529
Target Start/End: Original strand, 5758055 - 5758087
Alignment:
Q  497 gctggaaaccattaagtacatctaatgattttc 529  Q
    ||||||||||||||||||||||||||| |||||    
T  5758055 gctggaaaccattaagtacatctaatggttttc 5758087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 6620738 - 6620770
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  6620738 tgctggaaaccattaagtacatctaatggtttt 6620770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 44426739 - 44426771
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  44426739 tgctggaaaccattaagtacatctaatggtttt 44426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 196 - 567
Target Start/End: Original strand, 877606 - 877973
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||| |||||||| |||| |||||     
T  877606 ctacctcttgttcttcacggatccgtttcgcgtttcggtcttct---ccgatccggttcggatttgttgttgtgttgaattgttgttctgatccggttca 877702  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgg 394  Q
    ||| ||||||||||||| |||||| ||||||||||||||||||||||  |||||  || ||||||   ||||| |||||||||||||||||||||||||     
T  877703 aatcttgttgtggtaggttgtacgcactctccctctacctcttctaaaccgatttcgggtttattc--gaattcgagagtggtagatgatgtttatgtga 877800  T
Q  395 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaa 494  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  877801 ttttctatggtttagtgttcatgaggttcacagtttcagatttgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaa 877900  T
Q  495 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||| ||||||| ||||| |||||||||  | ||||||||| |||||| | |||||||||||    
T  877901 ctgctggaaaccatttagtacatgtaatggttttccacagtataatggttttggcattctgatacggtgatga 877973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 196 - 567
Target Start/End: Complemental strand, 33346031 - 33345653
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33346031 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 33345932  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggattt------------attgatgaatttgagagtggtagatg 382  Q
    ||| ||||||| ||     ||  |||||||||||||| |||||||||  ||||| ||||| |            |||||||| ||||||||||||| |||    
T  33345931 aatcttgttgttgt-----gtt-gaactctccctctatctcttctaaaccgattctggatgttcttctggattcattgatgactttgagagtggtaaatg 33345838  T
Q  383 atgtttatgtggttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggattt 482  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||| |||||||| |||||||| ||||||||    
T  33345837 atgtttatgtgattttctgtggtttagtgttcatgaggtttacggtttcagatctgaatttgttactaaattcgaaatctttgtgatgttaaagggattt 33345738  T
Q  483 acggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    | | |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  33345737 atgactggcaaactgccggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatga 33345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 347 - 567
Target Start/End: Complemental strand, 24737112 - 24736893
Alignment:
Q  347 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtggttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgtt 446  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  24737112 ttatggatttattgatgaattcgagagtggtagatgatgtttatgtgattttatgcggtttagtgttcatgaggttcacggtttcagatctgaagttgtt 24737013  T
Q  447 actggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttt 546  Q
    | ||||||| |||||||| |||||||||||| ||||| ||| || |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  24737012 a-tggattcgaaatctttgtgatgttagaggaatttatggcgggaaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggtttt 24736914  T
Q  547 tgcattccggtacggtgatga 567  Q
     ||||||  ||||||||||||    
T  24736913 ggcattctagtacggtgatga 24736893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 196 - 354
Target Start/End: Complemental strand, 24737351 - 24737192
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 294  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24737351 ctacctcttgttcttcacggctccgtttcacgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 24737252  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 354  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  24737251 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaaaccgattctggat 24737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 24737523 - 24737416
Alignment:
Q  24 ggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgcctt 123  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||  ||||    
T  24737523 ggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaatagttttcacggttttagacatccttttttgtgttgattcaaaatatctcctt 24737424  T
Q  124 agatttct 131  Q
    ||||||||    
T  24737423 agatttct 24737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 877412 - 877540
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| || | |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  877412 atgatgattccggcgtggtggccgatggtggcaccaccgcgtcggagttcaaaactccgtccaaatcaaaaagttttcacaattttagacatcatttttt 877511  T
Q  101 gtgttgattccaaatattgccttagattt 129  Q
    ||||||||||||||||| |||||| ||||    
T  877512 gtgttgattccaaatatcgccttaaattt 877540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 33346227 - 33346098
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    |||||||||| || | |||||||| | ||||||| |||||||  ||||||||||||| |||||||| |||||   | ||||| |||||||||||||||||    
T  33346227 atgatgattccggcgtggtggccgatagtggcaccaccgcgctagagttcaaaactctgtccaaataaaaaaaaat-cacgggtttagacatcctttttt 33346129  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    |||| |||||||||||| |||||||||||||    
T  33346128 gtgtcgattccaaatatcgccttagatttct 33346098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 3042435 - 3042352
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    |||||||||||||||||| | ||||||||||||||  ||||||| ||| | ||||||| |||| ||| ||||| |||||||||||    
T  3042435 gcggtggccggtggtggcgccaccgcgccggagttttaaactcc-tccgattcaaaaactttttacgtttttaaacatccttttt 3042352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 878063 - 878104
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  878063 tttccacaacaaaatggttttggcattccggtacagtgatga 878104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 5995725 - 5995689
Alignment:
Q  16 cggtggccggtggtggcacaaccgcgccggagttcaa 52  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5995725 cggtggccggtggtggcaccaccgcgccggagttcaa 5995689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 14237882 - 14237850
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  14237882 tgctggaaaccattaagtacatctaatgatttt 14237850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 20216059 - 20215976
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    ||||||||||| |||||||| |||||||||||| |||||||| | ||| | ||||||| |||| ||  ||||| |||||||||||    
T  20216059 gcggtggccggcggtggcaccaccgcgccggagctcaaaacttc-tccgattcaaaaactttttacatttttaaacatccttttt 20215976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 22110080 - 22109997
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    ||||||||||| |||||||| |||||||||||| |||||||| | ||| | ||||||| |||| ||  ||||| |||||||||||    
T  22110080 gcggtggccggcggtggcaccaccgcgccggagctcaaaacttc-tccgattcaaaaactttttacatttttaaacatccttttt 22109997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 24919211 - 24919128
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    |||||||||||  ||||||| ||||||||||||||| ||||||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  24919211 gcggtggccggcagtggcaccaccgcgccggagttcgaaactcc-tccgattcaaaaactttttacatttttaaacatccttttt 24919128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 24296438 - 24296481
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  24296438 gcggtggccggcggtggcaccaccacgccggagttcaaaactcc 24296481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 24310469 - 24310512
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  24310469 gcggtggccggcggtggcaccaccacgccggagttcaaaactcc 24310512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 27048684 - 27048727
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  27048684 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 27048727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 27058928 - 27058971
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  27058928 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 27058971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 30996958 - 30997001
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  30996958 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 30997001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 564
Target Start/End: Complemental strand, 24736803 - 24736765
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtga 564  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  24736803 tttccacaacaaaatggttttggcattccagtacggtga 24736765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 567
Target Start/End: Original strand, 878210 - 878247
Alignment:
Q  530 cacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||||||||||||  |||||||||||||||||||    
T  878210 cacaacaaaatggttttgacattccggtacggtgatga 878247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 18611920 - 18611953
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  18611920 ctgctggaaaccattaagtacatctaatggtttt 18611953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 30909346 - 30909379
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  30909346 ctgctggaaaccattaagtacatctaatggtttt 30909379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 5488176 - 5488208
Alignment:
Q  16 cggtggccggtggtggcacaaccgcgccggagt 48  Q
    ||||||||||||||||||| |||||||||||||    
T  5488176 cggtggccggtggtggcaccaccgcgccggagt 5488208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 25119210 - 25119178
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  25119210 tgctggaaaccattaagtacatctaatggtttt 25119178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 528
Target Start/End: Complemental strand, 27079810 - 27079774
Alignment:
Q  492 aaactgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  27079810 aaactgctagaaaccattaagtacatctaatggtttt 27079774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 9e-93; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 347 - 567
Target Start/End: Original strand, 638495 - 638715
Alignment:
Q  347 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtggttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgtt 446  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  638495 ttatggatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtcgtttcgtgttcatgaggttcacggtttcagatctaaagttgtt 638594  T
Q  447 actggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttt 546  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  638595 actggattcaaaatctttgtgatgttagagggatttatggctgggaaacagttggaaaccattaagtacatctaatggttttccacatcaaaatggtttt 638694  T
Q  547 tgcattccggtacggtgatga 567  Q
     ||||||||||||||||||||    
T  638695 ggcattccggtacggtgatga 638715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 196 - 354
Target Start/End: Original strand, 638256 - 638415
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 294  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |    
T  638256 ctacctcttgttcttcatggatccgtttcgcgttttggtcttcttctccgatccggttcagatttgttgttgtgttgaagtgttattccgatccggtttg 638355  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 354  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||    
T  638356 aatcttgttgtggtaggttgtacgaactctccctctacctcttctaaaccgattctggat 638415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 196 - 341
Target Start/End: Complemental strand, 26447073 - 26446927
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 294  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||    
T  26447073 ctacctcttgttcttcacggattcgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtggttaagtgttgttctgatccggttcg 26446974  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaa 341  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  26446973 aatcttgttgtggtaggctgtacgaactctccctccacctcttctaa 26446927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 26447268 - 26447138
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    ||||||||||  | |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26447268 atgatgattccagcgcggtggccgatggtggcaccaccgtgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 26447169  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    ||||||||||||||||| |||||||||||||    
T  26447168 gtgttgattccaaatatcgccttagatttct 26447138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 638076 - 638190
Alignment:
Q  16 cggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaat 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  638076 cggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcc-tttttgtgttgattccaaat 638174  T
Q  116 attgccttagatttct 131  Q
    || |||||||||||||    
T  638175 atcgccttagatttct 638190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 420 - 567
Target Start/End: Original strand, 45256465 - 45256612
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||| |||||||||| |||||||  |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45256465 gttcacggtttcagatatgaagttgtttctggatttgaaatctttgtgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 45256564  T
Q  520 aatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    || | |||| |||| |||||||||||| |||||||||| |||||||||    
T  45256565 aaaggttttgcacagcaaaatggttttggcattccggtccggtgatga 45256612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 18923812 - 18923920
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  18923812 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgctagaaatcattaagtacatct 18923911  T
Q  520 aatgatttt 528  Q
    |||||||||    
T  18923912 aatgatttt 18923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 4168911 - 4169019
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  4168911 gttcacggtttcagatcttaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgagaaactgctggaaaccattaagtacatct 4169010  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  4169011 aatggtttt 4169019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 476 - 567
Target Start/End: Complemental strand, 26577672 - 26577581
Alignment:
Q  476 gggatttacggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26577672 gggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggttttggcattccggtacggtgatga 26577581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 51836700 - 51836592
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||| || |||||||||||||||||||||    
T  51836700 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatattagagggatttatggctgggaaattgttggaaaccattaagtacatct 51836601  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  51836600 aatggtttt 51836592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 22180755 - 22180649
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||  ||||||||| |||||||||||| ||||||||||||||||||||||    
T  22180755 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgtt--agggatttatggctgggaaactactggaaaccattaagtacatct 22180658  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  22180657 aatggtttt 22180649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 427 - 528
Target Start/End: Original strand, 27764805 - 27764906
Alignment:
Q  427 gtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatctaatgatt 526  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| ||    
T  27764805 gtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctggaaaactgttggaaaccattaagtacatctaatggtt 27764904  T
Q  527 tt 528  Q
    ||    
T  27764905 tt 27764906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 420 - 522
Target Start/End: Complemental strand, 36621334 - 36621232
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||| |||| |||||||||||||  |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  36621334 gttcacggtttcagatatgaatttgttactggatttgaaatctttgtgatgttagagggatttatggttgggaaactgatggaaaccattaagtacatct 36621235  T
Q  520 aat 522  Q
    |||    
T  36621234 aat 36621232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 21097668 - 21097776
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||| ||||||||||||||||||||||||||||  |||| ||| ||||||||||| |||||| |||||||||||||||||||| ||||||||| ||||    
T  21097668 gttcacagtttcagatctgaagttgttactggatttgaaatttttgtgatgttagagagatttatggctgggaaactgctggaaatcattaagtatatct 21097767  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  21097768 aatggtttt 21097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 493 - 560
Target Start/End: Original strand, 10473159 - 10473226
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacg 560  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  10473159 aactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacg 10473226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 493 - 567
Target Start/End: Complemental strand, 26446875 - 26446801
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||| ||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||    
T  26446875 aactgttggaaaccattaagtacatctaatggttttccatatcaaaatggttttggcattccggtacggtgatga 26446801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 493 - 566
Target Start/End: Original strand, 38245558 - 38245631
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatg 566  Q
    |||||| ||||||||||||||| |||||||| ||||||||  |||||||||||| |||||||||||||||||||    
T  38245558 aactgccggaaaccattaagtagatctaatggttttccacggcaaaatggttttggcattccggtacggtgatg 38245631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 506 - 567
Target Start/End: Complemental strand, 51836573 - 51836512
Alignment:
Q  506 cattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  51836573 cattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatga 51836512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 52296772 - 52296728
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccg 59  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  52296772 gcggtggccggtggtggcaccactgcgccggagttcaaaactccg 52296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 12997569 - 12997531
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaa 53  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12997569 gcggtggccggtggtggcaccaccgcgccggagttcaaa 12997531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 10473459 - 10473500
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  10473459 tttccacaacaaaatagttttggcattccggtacggtgatga 10473500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 27765022 - 27765055
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||||||    
T  27765022 ctgctggaaaccattaagtacatctaatgatttt 27765055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 4749054 - 4749098
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagtt-caaaactcc 58  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  4749054 gcggtggccggtggtggcaccaccgcgccggagttccaaaactcc 4749098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 8157214 - 8157182
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  8157214 tgctggaaaccattaagtacatctaatgatttt 8157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 32215963 - 32215923
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaac 55  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  32215963 gcggtggccggtggtggcaccaccgcgccggagttcgaaac 32215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 52325243 - 52325275
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  52325243 tgctggaaaccattaagtacatctaatgatttt 52325275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 528
Target Start/End: Original strand, 4169027 - 4169062
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||| |||||||||||||||||||||||    
T  4169027 aactgctggaaaacattaagtacatctaatgatttt 4169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 529
Target Start/End: Complemental strand, 1728909 - 1728875
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgattttc 529  Q
    ||||||||||||||||||||||||||||| |||||    
T  1728909 ctgctggaaaccattaagtacatctaatggttttc 1728875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 10473328 - 10473369
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||| |||||||||||| |||||||    
T  10473328 tttccacagcaaaatggttttggcattccggtacagtgatga 10473369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 18924020 - 18924053
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  18924020 ctgctggaaaccattaagtacatctaatggtttt 18924053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 20862305 - 20862338
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||| ||||||||||||||||    
T  20862305 ctgctggaaaccattaaatacatctaatgatttt 20862338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Original strand, 38010649 - 38010682
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  38010649 ctgctggaaaccattaagtacatctaatggtttt 38010682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 567
Target Start/End: Original strand, 38245738 - 38245775
Alignment:
Q  530 cacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  38245738 cacagcaaaatggttttggcattccggtacggtgatga 38245775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 45256699 - 45256740
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||| ||| |||||||||||| ||||||||||||||||||||    
T  45256699 tttctacagcaaaatggttttggcattccggtacggtgatga 45256740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 2124448 - 2124416
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  2124448 tgctggaaaccattaagtacatctaatggtttt 2124416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 9813049 - 9813017
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||| |||||||||||||||||||||||    
T  9813049 tgctggaaatcattaagtacatctaatgatttt 9813017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 10374184 - 10374216
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||| |||||||||||||||||||||||||||    
T  10374184 tgctgaaaaccattaagtacatctaatgatttt 10374216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 16474926 - 16474894
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  16474926 tgctggaaaccattaagtacatctaatggtttt 16474894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 17141906 - 17141823
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    ||||| |||||||||||| | ||||||||||||||  ||| ||| ||| | ||||||| |||| ||| ||||| |||||||||||    
T  17141906 gcggtagccggtggtggcgccaccgcgccggagttttaaaatcc-tccgattcaaaaactttttacgtttttaaacatccttttt 17141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 522
Target Start/End: Original strand, 38245516 - 38245544
Alignment:
Q  494 actgctggaaaccattaagtacatctaat 522  Q
    |||||||||||||||||||||||||||||    
T  38245516 actgctggaaaccattaagtacatctaat 38245544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 38563909 - 38563877
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  38563909 tgctggaaaccattaagtacatctaatggtttt 38563877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 524
Target Start/End: Complemental strand, 41025166 - 41025138
Alignment:
Q  496 tgctggaaaccattaagtacatctaatga 524  Q
    |||||||||||||||||||||||||||||    
T  41025166 tgctggaaaccattaagtacatctaatga 41025138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 47568025 - 47568057
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||| |||||||||||||||||||||||||||    
T  47568025 tgctgaaaaccattaagtacatctaatgatttt 47568057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 51077001 - 51076969
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||| ||||||||||||||||    
T  51077001 tgctggaaaccattaaatacatctaatgatttt 51076969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 53526392 - 53526424
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||| ||||||||||||||||    
T  53526392 tgctggaaaccattaaatacatctaatgatttt 53526424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 54895523 - 54895555
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  54895523 tgctggaaaccattaagtacatctaatggtttt 54895555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 7e-66; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 196 - 354
Target Start/End: Original strand, 25193297 - 25193456
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25193297 ctacctcttgttcttcacagatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 25193396  T
Q  295 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 354  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||    
T  25193397 aatcttgttgtggtaggttgtacgaactctccctctacctcttctaaaccgattctggat 25193456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 4579488 - 4579360
Alignment:
Q  196 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  4579488 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccaatacggttcggatttgttgttgtgttgaagtgttgtttcgatctggttcg 4579389  T
Q  295 aattttgttgtggtaggctgtacgaactc 323  Q
    ||| ||||||| |||||||||||||||||    
T  4579388 aatcttgttgtcgtaggctgtacgaactc 4579360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 4579656 - 4579552
Alignment:
Q  27 ggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttaga 126  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4579656 ggtggcaccaccgcgctggagttcaatactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttaga 4579557  T
Q  127 tttct 131  Q
    |||||    
T  4579556 tttct 4579552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 466 - 567
Target Start/End: Complemental strand, 14550858 - 14550757
Alignment:
Q  466 tgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgat 565  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  14550858 tgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtatggtgat 14550759  T
Q  566 ga 567  Q
    ||    
T  14550758 ga 14550757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 20710318 - 20710426
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  20710318 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgagaaactgctggaaaccattaagtgcatct 20710417  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  20710418 aatggtttt 20710426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 18297688 - 18297580
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  18297688 gttcacggtttcagatctgaagttgttacaggattcttaatctttgtgatgttagagggatttatagctgggaaactgctggaaaccattaagtacatct 18297589  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  18297588 aatggtttt 18297580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 350 - 437
Target Start/End: Complemental strand, 4579315 - 4579228
Alignment:
Q  350 tggatttattgatgaatttgagagtggtagatgatgtttatgtggttttctgtggtttagtgttcatgaggttcacggtttcagatct 437  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4579315 tggatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 4579228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 25193101 - 25193230
Alignment:
Q  1 atgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 100  Q
    ||||||||||| | || ||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||    ||||||||||||||||||||||||    
T  25193101 atgatgattctagcgcagtggccggtggtggcaccaccgcgccggagttcaaaattccatccaaatcaaaaa-aaatcacggttttagacatcctttttt 25193199  T
Q  101 gtgttgattccaaatattgccttagatttct 131  Q
    ||||||||| || |||| |||||||||||||    
T  25193200 gtgttgatttcatatatcgccttagatttct 25193230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 476 - 567
Target Start/End: Original strand, 2264153 - 2264244
Alignment:
Q  476 gggatttacggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  2264153 gggatttatgactgggaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatga 2264244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 493 - 567
Target Start/End: Original strand, 25193495 - 25193569
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  25193495 aactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatga 25193569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 492 - 567
Target Start/End: Complemental strand, 4579226 - 4579151
Alignment:
Q  492 aaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||||||| |||| ||||||||||||||||||||    
T  4579226 aaactgctggaaaccattaagtatatctaatggttttccacagcaaaatgattttggcattccggtacggtgatga 4579151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 493 - 567
Target Start/End: Complemental strand, 18297572 - 18297498
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||| |||||||||||||    
T  18297572 aactgctggaaaccattaagtacatctaatggttttccatagcaaaatggttttggcattcaggtacggtgatga 18297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 22186131 - 22186082
Alignment:
Q  8 ttctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactc 57  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  22186131 ttctggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactc 22186082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 2264465 - 2264506
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  2264465 tttccacaacaaaatggttttggcattccggtacggtgatga 2264506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 17686391 - 17686470
Alignment:
Q  19 tggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatc-aaaaagttttcacggttttagacatcctttt 98  Q
    |||||||||||||||| ||||||||||||||  ||||||| || ||||| |||||||||| ||| ||||| ||||||||||    
T  17686391 tggccggtggtggcaccaccgcgccggagtttcaaactcc-tctaaatcaaaaaagtttttacgtttttaaacatcctttt 17686470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 20622492 - 20622454
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaa 53  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20622492 gcggtggccggtggtggcaccaccgcgccggagttcaaa 20622454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 28479967 - 28479887
Alignment:
Q  18 gtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    ||||||||||||||| | ||||||||||||||  ||||| ||||||| ||||||| |||| ||  ||||| |||||||||||    
T  28479967 gtggccggtggtggcgccaccgcgccggagttttaaact-cgtccaattcaaaaactttttacatttttaaacatccttttt 28479887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 567
Target Start/End: Complemental strand, 4579051 - 4579011
Alignment:
Q  527 ttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  4579051 ttccacagcaaaatggttttggcattccggtacggtgatga 4579011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 33308194 - 33308238
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactcc 58  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  33308194 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactcc 33308238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 21851547 - 21851590
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  21851547 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 21851590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 21859982 - 21860025
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  21859982 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 21860025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 25262627 - 25262584
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  25262627 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 25262584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 27425297 - 27425340
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  27425297 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 27425340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 27440343 - 27440386
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  27440343 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 27440386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 39756332 - 39756289
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 58  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  39756332 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 39756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Complemental strand, 4281121 - 4281088
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  4281121 ctgctggaaaccattaagtacatctaatggtttt 4281088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 14550655 - 14550614
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||| |||||||| |||||||||||    
T  14550655 tttccacagcaaaatggttttggcattccgatacggtgatga 14550614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 18297408 - 18297367
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| ||||||||||||  |||||||||||||||||||    
T  18297408 tttccacagcaaaatggttttgacattccggtacggtgatga 18297367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 34543055 - 34543088
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagt 48  Q
    |||||||||||||||||||| |||||||||||||    
T  34543055 gcggtggccggtggtggcaccaccgcgccggagt 34543088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 528
Target Start/End: Complemental strand, 41345375 - 41345342
Alignment:
Q  495 ctgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||| ||||    
T  41345375 ctgctggaaaccattaagtacatctaatggtttt 41345342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 1095283 - 1095251
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  1095283 tgctggaaaccattaagtacatctaatggtttt 1095251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 567
Target Start/End: Complemental strand, 4578791 - 4578751
Alignment:
Q  527 ttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||| |||||||||||| |||||| |||||||||||||    
T  4578791 ttccacagcaaaatggttttggcattcaggtacggtgatga 4578751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 567
Target Start/End: Complemental strand, 4578921 - 4578881
Alignment:
Q  527 ttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||||| |||||||||||| |||||||||||| |||||||    
T  4578921 ttccacagcaaaatggttttggcattccggtacagtgatga 4578881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 12449158 - 12449126
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  12449158 tgctggaaaccattaagtacatctaatggtttt 12449126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 21322012 - 21322044
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggag 47  Q
    |||||||||||||||||||| ||||||||||||    
T  21322012 gcggtggccggtggtggcaccaccgcgccggag 21322044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 22596408 - 22596376
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  22596408 tgctggaaaccattaagtacatctaatggtttt 22596376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 25575427 - 25575395
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  25575427 tgctggaaaccattaagtacatctaatggtttt 25575395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 30777451 - 30777419
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  30777451 tgctggaaaccattaagtacatctaatggtttt 30777419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 42364633 - 42364665
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  42364633 tgctggaaaccattaagtacatctaatggtttt 42364665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 86; Significance: 8e-41; HSPs: 3)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 420 - 521
Target Start/End: Complemental strand, 24828 - 24727
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  24828 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgctgaaaaccattaagtacatct 24729  T
Q  520 aa 521  Q
    ||    
T  24728 aa 24727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 24559 - 24518
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  24559 tttccacagcaaaatggttttggcattccggtacggtgatga 24518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 564
Target Start/End: Complemental strand, 24703 - 24664
Alignment:
Q  525 ttttccacaacaaaatggtttttgcattccggtacggtga 564  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  24703 ttttccacagcaaaatggttttggcattccggtacggtga 24664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 28157 - 28265
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  28157 gttcacggtttcagatctgaagttgttactagattcaaaatctttgtgatgttagagggatttatgactgggaaactggtggaaaccattaagtacatct 28256  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  28257 aatggtttt 28265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 14157 - 14265
Alignment:
Q  420 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatct 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  14157 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgagaaactgctggaaaccattaagtgcatct 14256  T
Q  520 aatgatttt 528  Q
    |||| ||||    
T  14257 aatggtttt 14265  T

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Target: scaffold0009 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 432 - 528
Target Start/End: Complemental strand, 203453 - 203357
Alignment:
Q  432 agatctgaagttgttactggattcaaaatctttatgatgttagagggatttacggctgggaaactgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||| ||||| ||| ||| |||||||||||||||||| ||||    
T  203453 agatctgaagttgttactcgattcgaaatctttgtgatgttagagggatttatggctggaaaactcctgaaaatcattaagtacatctaatggtttt 203357  T

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Target: scaffold0338 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 493 - 567
Target Start/End: Original strand, 6171 - 6245
Alignment:
Q  493 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  6171 aactgttggaaactattaagtacatataatggttttccacaacaaaatggttttggcattccggtacggtgatga 6245  T

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Target: scaffold0338; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 491 - 528
Target Start/End: Original strand, 6126 - 6163
Alignment:
Q  491 gaaactgctggaaaccattaagtacatctaatgatttt 528  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  6126 gaaactgctggaaaccattaagtacatctaatggtttt 6163  T

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Target: scaffold0338; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 6335 - 6376
Alignment:
Q  526 tttccacaacaaaatggtttttgcattccggtacggtgatga 567  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  6335 tttccacagcaaaatggttttggcattccggtacggtgatga 6376  T

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Target: scaffold1120 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 430 - 351
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatc-aaaaagttttcacggttttagacatcc 94  Q
    |||||||||||||||||||| ||||||||||||||  ||||||| || ||||| |||||||||| ||| ||||| ||||||    
T  430 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc-tctaaatcaaaaaagtttttacgtttttaaacatcc 351  T

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Target: scaffold0206 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 19550 - 19467
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  19550 gcggtggccggcggtggcaccaccgcgccggagttctaaactcc-tccgattcaaaaactttttacatttttaaacatccttttt 19467  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 96139 - 96171
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||||||||    
T  96139 tgctggaaaccattaagtacatctaatgatttt 96171  T

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Target: scaffold1896 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1896
Description:

Target: scaffold1896; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 475 - 437
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaa 53  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  475 gcggtggccggtagtggcaccaccgcgccggagttcaaa 437  T

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Target: scaffold0669 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 6040 - 6080
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaac 55  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  6040 gcggtggccggtggtggcaccaccgtgccggagttcgaaac 6080  T

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Target: scaffold0609 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 2512 - 2595
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    ||||| |||||||||||| | ||||||||||||||  ||||||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  2512 gcggtagccggtggtggcgccaccgcgccggagttttaaactcc-tccgattcaaaaactttttacatttttaaacatccttttt 2595  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 23648 - 23616
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  23648 tgctggaaaccattaagtacatctaatggtttt 23616  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 20024 - 19992
Alignment:
Q  496 tgctggaaaccattaagtacatctaatgatttt 528  Q
    |||||||||||||||||||||||||||| ||||    
T  20024 tgctggaaaccattaagtacatctaatggtttt 19992  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 64680 - 64763
Alignment:
Q  15 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 99  Q
    ||||||| || ||||||||| ||||||||||||||  || |||| || |||||||||| | || ||| ||||| |||||||||||    
T  64680 gcggtggtcgttggtggcaccaccgcgccggagtttcaacctcc-tctaaatcaaaaattgtttacgtttttaaacatccttttt 64763  T

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