View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7929_high_9 (Length: 261)

Name: NF7929_high_9
Description: NF7929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7929_high_9
NF7929_high_9
[»] chr1 (10 HSPs)
chr1 (14-242)||(8402179-8402406)
chr1 (13-205)||(22348039-22348235)
chr1 (31-205)||(18056784-18056960)
chr1 (13-162)||(179651-179804)
chr1 (48-162)||(23319993-23320107)
chr1 (31-205)||(45889596-45889774)
chr1 (66-162)||(30802439-30802535)
chr1 (90-162)||(37639385-37639457)
chr1 (90-205)||(16115851-16115966)
chr1 (90-162)||(35198131-35198203)
[»] chr3 (14 HSPs)
chr3 (13-205)||(51362308-51362503)
chr3 (13-205)||(19385188-19385380)
chr3 (13-188)||(52987519-52987698)
chr3 (13-203)||(50754008-50754200)
chr3 (13-205)||(7045170-7045365)
chr3 (48-205)||(8718101-8718258)
chr3 (48-205)||(9069988-9070145)
chr3 (37-176)||(39099226-39099365)
chr3 (68-201)||(16277342-16277475)
chr3 (90-162)||(23699371-23699443)
chr3 (90-162)||(23717826-23717898)
chr3 (90-162)||(23736282-23736354)
chr3 (119-162)||(17627210-17627253)
chr3 (13-69)||(31852242-31852302)
[»] chr8 (15 HSPs)
chr8 (13-205)||(7058114-7058310)
chr8 (31-207)||(32987334-32987512)
chr8 (13-201)||(4836570-4836762)
chr8 (13-201)||(4842015-4842207)
chr8 (13-176)||(8550533-8550700)
chr8 (37-205)||(39021975-39022143)
chr8 (37-205)||(15260748-15260917)
chr8 (13-129)||(2750101-2750223)
chr8 (66-162)||(7614111-7614207)
chr8 (13-77)||(1208829-1208895)
chr8 (90-162)||(15181834-15181906)
chr8 (118-206)||(1208708-1208796)
chr8 (13-62)||(39658412-39658463)
chr8 (138-205)||(42433701-42433768)
chr8 (118-158)||(1671850-1671890)
[»] chr5 (11 HSPs)
chr5 (13-205)||(28070032-28070218)
chr5 (13-162)||(2826938-2827089)
chr5 (48-203)||(13362772-13362927)
chr5 (37-206)||(23335603-23335773)
chr5 (90-162)||(18465506-18465578)
chr5 (31-203)||(25017121-25017280)
chr5 (13-77)||(34329247-34329311)
chr5 (89-162)||(16668743-16668816)
chr5 (37-106)||(42512273-42512342)
chr5 (118-205)||(34329127-34329214)
chr5 (90-162)||(8948933-8949003)
[»] chr4 (15 HSPs)
chr4 (13-177)||(637882-638048)
chr4 (13-205)||(45255975-45256173)
chr4 (13-205)||(26447281-26447477)
chr4 (48-202)||(22181153-22181307)
chr4 (13-162)||(51836959-51837113)
chr4 (49-207)||(27764238-27764396)
chr4 (48-176)||(4168387-4168515)
chr4 (37-205)||(21097140-21097308)
chr4 (66-201)||(36621627-36621762)
chr4 (56-203)||(38485590-38485733)
chr4 (50-109)||(18923355-18923414)
chr4 (90-162)||(50563679-50563751)
chr4 (138-206)||(50643742-50643810)
chr4 (118-162)||(6386519-6386563)
chr4 (93-137)||(48077817-48077861)
[»] chr2 (10 HSPs)
chr2 (13-205)||(18297980-18298176)
chr2 (13-205)||(25192892-25193088)
chr2 (31-206)||(20709773-20709950)
chr2 (90-162)||(25995330-25995402)
chr2 (13-77)||(4579695-4579763)
chr2 (90-162)||(4281738-4281810)
chr2 (118-204)||(14551297-14551382)
chr2 (115-187)||(4579793-4579865)
chr2 (118-176)||(36636915-36636973)
chr2 (118-162)||(5098760-5098804)
[»] chr7 (15 HSPs)
chr7 (13-208)||(15974805-15975004)
chr7 (13-176)||(46573369-46573536)
chr7 (48-208)||(30428870-30429030)
chr7 (49-207)||(46024025-46024183)
chr7 (66-171)||(33797965-33798070)
chr7 (90-176)||(5757416-5757502)
chr7 (13-77)||(48691112-48691180)
chr7 (15-77)||(48305356-48305422)
chr7 (90-162)||(32090621-32090693)
chr7 (122-205)||(12279745-12279828)
chr7 (13-77)||(28396842-28396910)
chr7 (118-205)||(48690895-48690982)
chr7 (118-162)||(44141229-44141273)
chr7 (118-205)||(28396722-28396809)
chr7 (118-159)||(48691038-48691079)
[»] chr6 (7 HSPs)
chr6 (13-175)||(24737562-24737726)
chr6 (13-205)||(33346240-33346436)
chr6 (31-162)||(877251-877384)
chr6 (90-162)||(18611232-18611304)
chr6 (90-186)||(29157245-29157341)
chr6 (118-205)||(34399641-34399728)
chr6 (90-205)||(15034920-15035040)
[»] scaffold0238 (1 HSPs)
scaffold0238 (13-208)||(25094-25300)
[»] scaffold0097 (1 HSPs)
scaffold0097 (31-206)||(13612-13789)
[»] scaffold0194 (1 HSPs)
scaffold0194 (50-205)||(27607-27762)
[»] scaffold0337 (1 HSPs)
scaffold0337 (118-202)||(7020-7104)
[»] scaffold0544 (1 HSPs)
scaffold0544 (118-204)||(10653-10739)


Alignment Details
Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 8402179 - 8402406
Alignment:
Q  14 agatgaagactcatctgaattgtagagagagagtg------ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttg 107  Q
    ||||||||||||||||||||||||||||||||| |      ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  8402179 agatgaagactcatctgaattgtagagagagagagagagagctttatgttttagtgagagaaatgtttgaagcagatgaagtttgatttggtttagtttg 8402278  T
Q  108 aggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgccaa 207  Q
    || |  ||| |||||||||| |||||||||| |||||||||||||||||||||||       | |||||||||||||||||||||| |||||||||||||    
T  8402279 agaaacctaggattattacatgtgtacactagatctgatggttatgaagtgttta-------tgcataaaaatttccttatccaccataacttttgccaa 8402371  T
Q  208 tgtttctctcactttaagaaaaggatcaatcaagc 242  Q
    |||||||||||||||||||||||||||||||||||    
T  8402372 tgtttctctcactttaagaaaaggatcaatcaagc 8402406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 22348235 - 22348039
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    ||||||||||||||| |||||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22348235 gagatgaagactcatatgaattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 22348136  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    | || ||| ||||||||||||||||||||| || |||||||| ||||||||||| |  |||| |||||  |||||||||| |||| |||||||||||    
T  22348135 gaagcctaggattattacacgtgtacactagatatgatggttgtgaagtgtttatgcgcggtgcataaggatttccttatgcaccataacttttgcc 22348039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 18056960 - 18056784
Alignment:
Q  31 aattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 128  Q
    ||||||||||||||  || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  18056960 aattgtagagagagggagagttttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacac 18056861  T
Q  129 gtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    |||||||||| ||||||||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  18056860 gtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 18056784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 179804 - 179651
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    |||||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  179804 gagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagagaaatgttttaagcaaatgaagtttgatttggtgtagtttga 179705  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    | ||  |  ||||||||||||||||||||| ||||||||||| |||||||||||    
T  179704 gaagcttgggattattacacgtgtacactagatctgatggttgtgaagtgttta 179651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 23319993 - 23320107
Alignment:
Q  48 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 147  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  23319993 gctttatgttttagtgagagaaatgtttaaagcaaatgaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatg 23320092  T
Q  148 gttatgaagtgttta 162  Q
    ||| |||||||||||    
T  23320093 gttgtgaagtgttta 23320107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 45889774 - 45889596
Alignment:
Q  31 aattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattac 126  Q
    |||||||||||||||| |    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| || |||||||||||||    
T  45889774 aattgtagagagagagggagaactttatgttttagtgagagaaatgtttgaaggaaatgaaatttgatttggtgtagtttgagaagcctaagattattac 45889675  T
Q  127 acgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    || |||| |||| ||||||||||| | || |||||| | |||||  |||| ||||||||||| |||| || ||||||||    
T  45889674 acatgtatactagatctgatggttgtaaaatgtttatgcacggtggataagaatttccttatgcaccataccttttgcc 45889596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 30802535 - 30802439
Alignment:
Q  66 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  30802535 agaaatatttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaagattattacacgtgtacactagatctgatggttgtgaaatgttta 30802439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 37639457 - 37639385
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||| |||||||||||    
T  37639457 ttgatttggtgtagtttgagaagtctataattattacacgtgtacactagatctgatggttgtgaagtgttta 37639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 16115966 - 16115851
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatc 189  Q
    ||||||||||||||||| || |||||  |||||||||||||||||| || || |||||||| ||||||||||| | ||||| |||||  ||||||||||     
T  16115966 ttgatttggtgtagtttaagaagtcttggattattacacgtgtacattagatttgatggttgtgaagtgtttatgcacggtgcataaggatttccttatg 16115867  T
Q  190 caccgtaacttttgcc 205  Q
    ||   |||||||||||    
T  16115866 catgataacttttgcc 16115851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 35198131 - 35198203
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    ||||||| |||||||||||  |||||| ||||||||||||||||||||| ||||||||| | |||||||||||    
T  35198131 ttgattttgtgtagtttgaaaagtctaggattattacacgtgtacactagatctgatggctgtgaagtgttta 35198203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 51362308 - 51362503
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtgc---tttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgag 109  Q
    |||||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51362308 gagatgaagactcatctgaattgtagagagagagggaaagtttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgag 51362407  T
Q  110 gagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
     || ||| ||||||||||||||||||||||||||||||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  51362408 aagcctaggattattacacgtgtacactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 51362503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 19385188 - 19385380
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggag 112  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||| ||    
T  19385188 gagatgaagactcatctgaattgtagagagggagagttttatgttttagtgagggaaatgattgaagcaaatgaagtttgatttgatgtagtttgagaag 19385287  T
Q  113 tctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
     |||  |||||||||||||||||||||||||||||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  19385288 cctagaattattacacgtgtacactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 19385380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 52987519 - 52987698
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    |||||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52987519 gagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttggtgtagtttga 52987618  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttat 188  Q
    | || ||| ||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||  ||||||||||    
T  52987619 gaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttat 52987698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 50754200 - 50754008
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagg 110  Q
    ||||| ||||||||||||||||||||||||||  || |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||     
T  50754200 gagattaagactcatctgaattgtagagagagggagagctttatgttttagtgagagaagtgtttgaatcaaatgaagtttgatttggtgtagtttgaga 50754101  T
Q  111 agtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttg 203  Q
    || ||| ||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||  ||||||||||  ||| |||||||||    
T  50754100 agcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgtaccataacttttg 50754008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 7045170 - 7045365
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    |||||||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||    
T  7045170 gagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaat-aagtttgatttgatgtagtctga 7045268  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    | || ||| ||||||||||||||||||||| ||||||||||| |||||||||||   ||||| ||||| ||||||||||| |||| |||||||||||    
T  7045269 gaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 7045365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 8718258 - 8718101
Alignment:
Q  48 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 147  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || || ||| ||||||||||| ||||||||| ||||||||    
T  8718258 gctttatgttttagtgagagaaatgttttaaacaaatgaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatg 8718159  T
Q  148 gttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    ||| |||||| |||| ||||||| |||||  |||||||||| |||| |||||||||||    
T  8718158 gttgtgaagtatttatgtacggtgcataaggatttccttatgcaccataacttttgcc 8718101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 9070145 - 9069988
Alignment:
Q  48 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 147  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || || ||| ||||||||||| ||||||||| ||||||||    
T  9070145 gctttatgttttagtgagagaaatgttttaaacaaatgaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatg 9070046  T
Q  148 gttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    ||| |||||| |||| ||||||| |||||  |||||||||| |||| |||||||||||    
T  9070045 gttgtgaagtatttatgtacggtgcataaggatttccttatgcaccataacttttgcc 9069988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 39099365 - 39099226
Alignment:
Q  37 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacac 136  Q
    |||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| || ||| |||||||||||||||||||    
T  39099365 agagagggagagctttatgttttagtgagagaaatgttttaaacaaatgaagtttgatttagtgtagtttgagaagcctaggattattacacgtgtacac 39099266  T
Q  137 taaatctgatggttatgaagtgtttacgtacggtacataa 176  Q
    || ||||||||||| |||| | |||| | ||||| |||||    
T  39099265 tagatctgatggttgtgaaatatttatgcacggtgcataa 39099226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 16277342 - 16277475
Alignment:
Q  68 aaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtac 167  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||| || |||||||| ||||||||||| | ||    
T  16277342 aaatgtttgaaacaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacacgtgtacactagatatgatggttgtgaagtgtttatgcac 16277441  T
Q  168 ggtacataaaaatttccttatccaccgtaacttt 201  Q
    ||| |||||| |||||||||| |||| |||||||    
T  16277442 ggtgcataaagatttccttatgcaccataacttt 16277475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 23699443 - 23699371
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||| ||||||||||  || ||| |||||||||||||||||| || || |||||||| |||||||||||    
T  23699443 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgttta 23699371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 23717898 - 23717826
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||| ||||||||||  || ||| |||||||||||||||||| || || |||||||| |||||||||||    
T  23717898 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgttta 23717826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 23736354 - 23736282
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||| ||||||||||  || ||| |||||||||||||||||| || || |||||||| |||||||||||    
T  23736354 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgttta 23736282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 17627210 - 17627253
Alignment:
Q  119 attattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  17627210 attattacacgtgtacactagatctgatggttgtgaagtgttta 17627253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 31852302 - 31852242
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaa 69  Q
    |||||||||||||||||||| ||||||||||||| |    |||||||||||||||||||||    
T  31852302 gagatgaagactcatctgaactgtagagagagagggagaactttatgttttagtgagagaa 31852242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 7e-64; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 7058310 - 7058114
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    |||||||||||||||||||||||||||||||||| |    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7058310 gagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagagaagtgtttgaagcaaatgaagtttgatttggtgtagtttga 7058211  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    | |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  7058210 gaagtctaggattattacacgtgtacactagatcggatggttgtgaagtgtttatgcacggtgcataagtatttccttatgcaccataacttttgcc 7058114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 31 - 207
Target Start/End: Original strand, 32987334 - 32987512
Alignment:
Q  31 aattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 128  Q
    ||||||||||||||  || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  32987334 aattgtagagagagggagagctttatgttttagttagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacac 32987433  T
Q  129 gtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgccaa 207  Q
    |||||||||| ||||||||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||||    
T  32987434 gtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgccaa 32987512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 4836570 - 4836762
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    |||||||||||||||||||||||||||||||||| |    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4836570 gagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagataaatgtttgaagcaaatgaagtttgatttggtgtagtttga 4836669  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttt 201  Q
      ||  || ||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||  ||||| |||| |||| |||||||    
T  4836670 aaagcttaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagcatttctttatgcaccataacttt 4836762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 4842015 - 4842207
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    |||||||||||||||||||||||||||||||||| |    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4842015 gagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagataaatgtttgaagcaaatgaagtttgatttggtgtagtttga 4842114  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttt 201  Q
      ||  || ||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||  ||||| |||| |||| |||||||    
T  4842115 aaagcttaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagcatttctttatgcaccataacttt 4842207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 8550700 - 8550533
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    ||||||||||||||||||||||||||||| |||| |    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8550700 gagatgaagactcatctgaattgtagagaaagagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtaatttga 8550601  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataa 176  Q
    | ||  || ||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||    
T  8550600 gaagcttatgattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataa 8550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 37 - 205
Target Start/End: Complemental strand, 39022143 - 39021975
Alignment:
Q  37 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacac 136  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||||||    
T  39022143 agagagggagagctttatgttttagtgagataaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacatgtacac 39022044  T
Q  137 taaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    || |||||||| || ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  39022043 tagatctgatgattgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 39021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 205
Target Start/End: Original strand, 15260748 - 15260917
Alignment:
Q  37 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacac 136  Q
    |||||| ||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||  |||||||| ||||||||||    
T  15260748 agagagggagagttttatattttagtgagagaaatatttgaagcaaatgaagtttgatttggtgtagtttgagaagccttggattattaaacgtgtacac 15260847  T
Q  137 taaatctgatggttatgaagtgtttacgtacggtacataa-aaatttccttatccaccgtaacttttgcc 205  Q
    || || |||||||| ||||||||||| | ||||| |||||  ||  ||||||| |||| |||||||||||    
T  15260848 tagatttgatggttgtgaagtgtttatgcacggtgcataaggaaaatccttatgcaccataacttttgcc 15260917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 2750223 - 2750101
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagag------agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagttt 106  Q
    ||||||||||||||||||||||||||||||||      || || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  2750223 gagatgaagactcatctgaattgtagagagagtgagggagagcattatgttttagtgagagaaatgtttaaagtaaatgaagtttgatttggtgtagttt 2750124  T
Q  107 gaggagtctaagattattacacg 129  Q
    ||| |||||| ||||||||||||    
T  2750123 gagaagtctatgattattacacg 2750101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 7614207 - 7614111
Alignment:
Q  66 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| || ||||||||||| |||||||||||    
T  7614207 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctatgattattacacgtgtacattagatctgatggttgtgaagtgttta 7614111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 1208895 - 1208829
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagag--agtgctttatgttttagtgagagaaatgtttga 77  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||    
T  1208895 gagatgaagactcatctgaattgtagagagagggagagctttatgttttagtgagagaaatgtttga 1208829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 15181906 - 15181834
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||| || |||||||||||    
T  15181906 ttgatttggtgtagtttgagaaacctaagattattacacgtgtacactagatctgatgcttgtgaagtgttta 15181834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 1208796 - 1208708
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcca 206  Q
    ||||||||||||||||||||| |||| |||||| | ||||||||| | ||||| |||||  |||||||||| |||| ||||||||||||    
T  1208796 gattattacacgtgtacactagatcttatggttgtaaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcca 1208708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 39658412 - 39658463
Alignment:
Q  13 gagatgaagactcatctgaattgtagagaga--gagtgctttatgttttagt 62  Q
    ||||||||||||||| |||||||||||||||  ||| |||||||||||||||    
T  39658412 gagatgaagactcatttgaattgtagagagagggagagctttatgttttagt 39658463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 42433768 - 42433701
Alignment:
Q  138 aaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    ||||||||||||| ||||||| ||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  42433768 aaatctgatggttgtgaagtgcttatgcacggtgcataaggatttccttatgcaccataacttttgcc 42433701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 1671890 - 1671850
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtg 158  Q
    ||||||||||||| |||||||||||||||| || |||||||    
T  1671890 gattattacacgtatacactaaatctgatgattgtgaagtg 1671850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 28070032 - 28070218
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggag 112  Q
    ||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28070032 gagatgaagactcatctgaattgtagagag------ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaag 28070125  T
Q  113 tctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  28070126 tctaggattattacacgtgtacactagatctgatagttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 28070218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 2826938 - 2827089
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagg 110  Q
    ||||||||||||||| ||||||||||||||||  || ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||     
T  2826938 gagatgaagactcatttgaattgtagagagagggagagctttatgttttagtgagataaatgtttgaagcaaatgaaatttgatttggtgtagtttgaga 2827037  T
Q  111 agtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    || ||||||| ||||||||||||||||| ||||||||||| | |||||||||    
T  2827038 agcctaagataattacacgtgtacactagatctgatggttgtaaagtgttta 2827089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 13362927 - 13362772
Alignment:
Q  48 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 147  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||    
T  13362927 gctttatgttttagtgagagaaatgtttgaagcaaatgaattttgatttggtgtagtttgagaagcctatgattattacacgtatacactagatctgatg 13362828  T
Q  148 gttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttg 203  Q
    ||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||    
T  13362827 gttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 13362772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 37 - 206
Target Start/End: Original strand, 23335603 - 23335773
Alignment:
Q  37 agagagagagtgctttatgtttt-agtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtaca 135  Q
    |||||| ||| |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  23335603 agagagggagagctttatgtttttagtgagagaaatgtttgatgcaaatgaactttgatttggtgtagtttgagaagcctatgattattacacgtgtaca 23335702  T
Q  136 ctaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcca 206  Q
    ||| ||||||||||| |||| |||||| | ||||| ||||   |||||||||| |||| ||||||||||||    
T  23335703 ctagatctgatggttgtgaaatgtttatgcacggtgcatacggatttccttatgcaccataacttttgcca 23335773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 18465506 - 18465578
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18465506 ttgatttggtgtagtttgagaagtctaagattattacacgtgtacactagatctgatggttgtgaagtgttta 18465578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 25017121 - 25017280
Alignment:
Q  31 aattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 128  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||               |||||||| |  |||| ||||||||||    
T  25017121 aattgtagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatga---------------agtttgagaaacctaaaattattacac 25017205  T
Q  129 gtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttg 203  Q
    |||||||||| ||||||||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||    
T  25017206 gtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 25017280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 34329311 - 34329247
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtgctttatgttttagtgagagaaatgtttga 77  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34329311 gagatgaagacccatctgaattgtagagagagagagctttatgttttagtgagagaaatgtttga 34329247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 16668743 - 16668816
Alignment:
Q  89 tttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  16668743 tttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgttta 16668816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 42512342 - 42512273
Alignment:
Q  37 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagttt 106  Q
    |||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42512342 agagagggagagctttaggttttagtgagagaaatgtttgaagtaaatgaagtttgatttggtgtagttt 42512273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 34329214 - 34329127
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    ||||||||  ||||||||||| ||||||||||| ||||||||||| | ||||| |||||| |||||||||| |||| |||||||||||    
T  34329214 gattattattcgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaagatttccttatgcaccataacttttgcc 34329127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 8949003 - 8948933
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||||||||||| || ||| ||||||  ||||||||||||||||||||| ||| |||||||||||    
T  8949003 ttgatttggtgtagtttgagaagcctaggattat--cacgtgtacactaaatctgatagttttgaagtgttta 8948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 638048 - 637882
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagg 110  Q
    ||||||||||||||||| ||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  638048 gagatgaagactcatctaaattgtagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaga 637949  T
Q  111 agtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaa 177  Q
    || |||| |||||||||| ||||||||| ||||||||||| ||||||||||| | ||||| ||||||    
T  637948 agcctaaaattattacacatgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaa 637882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 45256173 - 45255975
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg------ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagttt 106  Q
    |||||||||||||||||||||||||||||||||| |      ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45256173 gagatgaagactcatctgaattgtagagagagagggggggagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttgatgtagttt 45256074  T
Q  107 gaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    ||  || ||| ||||||||||||||||||||| ||||||| ||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  45256073 gaaaagcctaggattattacacgtgtacactatatctgatagttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 45255975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 26447281 - 26447477
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    ||||||| ||||||||||||||||| |||||||| |    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||     
T  26447281 gagatgaggactcatctgaattgtatagagagagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaaatttgatttggtgtaatttgt 26447380  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    | || |||  |||||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||  |||||||||| |||| | |||||||||    
T  26447381 gaagcctagaattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccattacttttgcc 26447477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 48 - 202
Target Start/End: Original strand, 22181153 - 22181307
Alignment:
Q  48 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 147  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  ||| ||||||||||||||||||||||||||||||    
T  22181153 gctttatgttttagtgagagaaatgtttgaggcaaatgaagtttgatttggtgtagtttgagaaacctaggattattacacgtgtacactaaatctgatg 22181252  T
Q  148 gttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaactttt 202  Q
    ||| |||||| |||| | ||||| |||||  |||||||||| |||| ||||||||    
T  22181253 gttgtgaagtttttatgcacggtgcataaggatttccttatgcaccataactttt 22181307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 51836959 - 51837113
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaa-tgaagtttgatttggtgtagtttg 107  Q
    |||||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  51836959 gagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagtaaaatgaagtttgatttggtgtagtttg 51837058  T
Q  108 aggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    || || ||| |||||||||||||||||| |||||||||||||| |||||| ||||    
T  51837059 agaagcctaggattattacacgtgtacattaaatctgatggttgtgaagtattta 51837113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 27764396 - 27764238
Alignment:
Q  49 ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatgg 148  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||  || ||||||||||||||||||||| |||||||||    
T  27764396 ctttatgttttagtgagagaaatgtttgaagcaaataaggtttgatttggtgtagtttgagaagcgtaggattattacacgtgtacactagatctgatgg 27764297  T
Q  149 ttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgccaa 207  Q
    ||  |||||||||| | ||||| |||||  |||||||||| |||| |||||||||||||    
T  27764296 ttgcgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgccaa 27764238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 4168515 - 4168387
Alignment:
Q  48 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||| |||||||||| |||||||||| ||||||||    
T  4168515 gctttatgttttagtgagagaaatgtttgaaacaaatgaagtttgatttggtgtagtttgagaaacctaggattattacatgtgtacactagatctgatg 4168416  T
Q  148 gttatgaagtgtttacgtacggtacataa 176  Q
    ||| ||||||||||| | ||||| |||||    
T  4168415 gttgtgaagtgtttatgcacggtgcataa 4168387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 205
Target Start/End: Complemental strand, 21097308 - 21097140
Alignment:
Q  37 agagagagagtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacac 136  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  ||  ||  ||||||||||||||| ||    
T  21097308 agagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtaatttaataagcttagaattattacacgtgtaaac 21097209  T
Q  137 taaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    || |||| |||||| |||||||||||   ||||| |||||  |||||||||| ||| ||||||||||||    
T  21097208 tagatctaatggttgtgaagtgtttatacacggtgcataaggatttccttatgcacggtaacttttgcc 21097140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 201
Target Start/End: Original strand, 36621627 - 36621762
Alignment:
Q  66 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgt 165  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||  || |||||||||||||||||| || ||||||||||| ||||||||||| |     
T  36621627 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttaagaagcataggattattacacgtgtacattagatctgatggttgtgaagtgtttatgc 36621726  T
Q  166 acggtacataaaaatttccttatccaccgtaacttt 201  Q
    ||||| |||||  |||||||||| |||| |||||||    
T  36621727 acggtgcataaggatttccttatgcaccataacttt 36621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 38485590 - 38485733
Alignment:
Q  56 ttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaa 155  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| |||||| || ||| |||||||||||||||||| || ||||||||||| ||||    
T  38485590 ttttagtgagagaaatgtttgaagcaaatgaagtttgatttaatgtattttgagaagcctaggattattacacgtgtacattagatctgatggttgtgaa 38485689  T
Q  156 gtgtttacgtacggtacataaaaatttccttatccaccgtaacttttg 203  Q
    | ||||| | ||||| |||||    |||||||| |||| |||||||||    
T  38485690 gcgtttatgcacggtgcataa----ttccttatgcaccataacttttg 38485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 18923414 - 18923355
Alignment:
Q  50 tttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgag 109  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  18923414 tttatgttttagtgacagaaatatttgaagcaaatgaagtttgatttggtgtagtttgag 18923355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 50563679 - 50563751
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||||||||||| |  |||  |||||||||||||||||||| ||||||||||| |||||||||||    
T  50563679 ttgatttggtgtagtttgagaaacctataattattacacgtgtacactagatctgatggttgtgaagtgttta 50563751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 50643810 - 50643742
Alignment:
Q  138 aaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcca 206  Q
    ||||||||||||||||||||||||| | ||||| |||||  |||||||||| |||| ||||||||||||    
T  50643810 aaatctgatggttatgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcca 50643742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 6386519 - 6386563
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||    
T  6386519 gattattacacgtgtccactaaatctgatggttgtgaagtgttta 6386563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 48077817 - 48077861
Alignment:
Q  93 atttggtgtagtttgaggagtctaagattattacacgtgtacact 137  Q
    ||||||||||||||||| || ||| ||||||||||| ||||||||    
T  48077817 atttggtgtagtttgagaagcctaggattattacacatgtacact 48077861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 18297980 - 18298176
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtgc----tttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    ||||||||||||||||| |||||||||||||||| |     ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  18297980 gagatgaagactcatctaaattgtagagagagagggagagatttatgttttagtgagagaaacgcttgaagcaaatgaagtttgatttggtgtagtttga 18298079  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    | || ||| ||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  18298080 gaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 18298176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 25193088 - 25192892
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    ||||||||||||| | |||||||||||||||||| |    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25193088 gagatgaagactcgtatgaattgtagagagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtaatttga 25192989  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    | || |||  |||||||||||||||||||| |||| |||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  25192988 gaagcctagaattattacacgtgtacactagatctaatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 25192892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 31 - 206
Target Start/End: Complemental strand, 20709950 - 20709773
Alignment:
Q  31 aattgtagagagagagtg--ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 128  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||     
T  20709950 aattgtagagagagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacat 20709851  T
Q  129 gtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcca 206  Q
    |||||||||| ||||||||||| ||||||||||| | |||||  ||||  |||||||||| |||| ||||||||||||    
T  20709850 gtgtacactagatctgatggttgtgaagtgtttatgcacggtggataaggatttccttatgcaccataacttttgcca 20709773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 25995402 - 25995330
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    ||||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  25995402 ttgatttggtgtaatttgagtagcctaggattattacacgtgtacactaaatctgatggttgtgaagtattta 25995330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 4579695 - 4579763
Alignment:
Q  13 gagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgagagaaatgtttga 77  Q
    |||||||||||||||||||||||||||||||    ||| ||||||||||||||||||||||||||||||    
T  4579695 gagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagagaaatgtttga 4579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 4281738 - 4281810
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||| ||||||||||| |  ||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  4281738 ttgatttgctgtagtttgagaaacctaggattattacacgtgtacactagatctgatggttgtgaagtgttta 4281810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 14551297 - 14551382
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgc 204  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||| | || || ||||| ||||||||||| |||| ||||||||||    
T  14551297 gattattacacatgtacactagatctgatggttgtgaagtgtttatgcac-gtgcataagaatttccttatgcaccataacttttgc 14551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 4579793 - 4579865
Alignment:
Q  115 taagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttcctta 187  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||| | | ||| |||||  |||||||||    
T  4579793 taagattattacacgtgtacactagatctgatggttgtaaagtgtttatgcatggtgcataaggatttcctta 4579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 36636915 - 36636973
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataa 176  Q
    |||||||||||||||| |  ||||||||||||| ||||||||||| ||| |||||||||    
T  36636915 gattattacacgtgtaaaacaaatctgatggttgtgaagtgtttatgtagggtacataa 36636973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 5098804 - 5098760
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||    
T  5098804 gattattacacgtgtacaataaatttgatggttgtgaagtgttta 5098760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 208
Target Start/End: Original strand, 15974805 - 15975004
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagag----agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    ||||||||||||||||||| ||||| ||||||    || |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  15974805 gagatgaagactcatctgacttgtacagagagggagagagctttatgttttagtgagagaaatgtttgaagcagatgaagtttgatttggtgtactttga 15974904  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgccaat 208  Q
      || |||||||||||||| ||||||||||||| |||||||| ||||||||||| | ||||| |||||  |||||||||| |||| ||||||||||||||    
T  15974905 taagcctaagattattacatgtgtacactaaatatgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgccaat 15975004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 46573369 - 46573536
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    ||||||||||||||||||||||||||| |||||| |    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46573369 gagatgaagactcatctgaattgtagatagagagggagagctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 46573468  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataa 176  Q
    | || ||| ||||||||||||||||||||| ||||||||||| |||||||||||  |||||| |||||    
T  46573469 gaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatatacggtgcataa 46573536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 30429030 - 30428870
Alignment:
Q  48 gctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatg 147  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||    
T  30429030 gctttatgttttagtgagataaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatg 30428931  T
Q  148 gttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgccaat 208  Q
    ||| |||| |||||| | ||||| |||||  |||||||||| |||| ||||||||||||||    
T  30428930 gttgtgaaatgtttatgcacggtgcataaggatttccttatgcaccataacttttgccaat 30428870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 46024183 - 46024025
Alignment:
Q  49 ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatgg 148  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  46024183 ctttatgttttagtgagagaaatatttgaagcaaatgaagtttgatttaatgtagtttgagaagtctaggattattacacgtgtacactatatctgatgg 46024084  T
Q  149 ttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgccaa 207  Q
    || ||||||||||| | ||||| |||||  |||| ||| | |||| |||||||||||||    
T  46024083 ttgtgaagtgtttatgcacggtgcataaggattttcttgtgcaccataacttttgccaa 46024025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 171
Target Start/End: Complemental strand, 33798070 - 33797965
Alignment:
Q  66 agaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgt 165  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| |||| ||||||||||| |||| |||||| |     
T  33798070 agaaatgtttgaagcaaatgaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtatactagatctgatggttgtgaaatgtttatgc 33797971  T
Q  166 acggta 171  Q
    ||||||    
T  33797970 acggta 33797965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 5757502 - 5757416
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataa 176  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||    
T  5757502 ttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataa 5757416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 48691180 - 48691112
Alignment:
Q  13 gagatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgagagaaatgtttga 77  Q
    |||||||||||||||||||||||||||||||    ||| |||||||||||||||||||||||| |||||    
T  48691180 gagatgaagactcatctgaattgtagagagagagggagagctttatgttttagtgagagaaatttttga 48691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 48305422 - 48305356
Alignment:
Q  15 gatgaagactcatctgaattgtagagaga----gagtgctttatgttttagtgagagaaatgtttga 77  Q
    |||||||||||||||||||||||||||||    ||| ||||||||||||| ||||||||||||||||    
T  48305422 gatgaagactcatctgaattgtagagagagagggagagctttatgttttattgagagaaatgtttga 48305356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 32090693 - 32090621
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||||||||||| || ||| |||||||||||||||| |||| || |||||||| |||| ||||||    
T  32090693 ttgatttggtgtagtttgagaagcctatgattattacacgtgtatactagatttgatggttctgaattgttta 32090621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 12279828 - 12279745
Alignment:
Q  122 attacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    ||||||||| ||||||| |||| |||||| |||||| |||| | ||||| |||||| |||||||||| |||| |||||||||||    
T  12279828 attacacgtatacactagatctaatggttgtgaagtctttatgcacggtgcataaagatttccttatgcaccataacttttgcc 12279745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 28396910 - 28396842
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttga 77  Q
    ||||||||||||||||||||||| |||||||||| |    |||||||||||| ||||||||||||||||    
T  28396910 gagatgaagactcatctgaattgcagagagagagggagaactttatgttttattgagagaaatgtttga 28396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 48690982 - 48690895
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    ||||||||||||||||||||| || |||||||| |||| |||||| | ||||| |||||  ||||| |||| |||| |||||||||||    
T  48690982 gattattacacgtgtacactagatttgatggttgtgaactgtttatgcacggtgcataaggatttctttatgcaccataacttttgcc 48690895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 44141229 - 44141273
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  44141229 gattattacacgtgtacactaaatcagatggttgtgaagtgttta 44141273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 28396809 - 28396722
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    ||||||||| | ||||||||| |||||||| || |||| |||||| | ||||| |||||  |||||||||| || |||||||||||||    
T  28396809 gattattactcttgtacactagatctgatgattgtgaaatgtttatgcacggtgcataaggatttccttatgcatcgtaacttttgcc 28396722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 48691079 - 48691038
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgt 159  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  48691079 gattattacacgtgtacactagatctgatggttgtgaagtgt 48691038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 24737562 - 24737726
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagg 110  Q
    ||||||||||||||||||||||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  24737562 gagatgaagactcatctgaattgtagagagagggagagttttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttaaga 24737661  T
Q  111 agtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacata 175  Q
    || ||| ||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| ||||    
T  24737662 agcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcata 24737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 33346240 - 33346436
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagtg----ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttga 108  Q
    |||||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||    
T  33346240 gagatgaagactcatctgaattgtagagagagagggagaactttatgttttagtgagagaaatgtttgaagcaaacgaagtttgatttgacgtagtttga 33346339  T
Q  109 ggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    | || |||  |||||||||||||||||||| || |||||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||||||    
T  33346340 gaagcctataattattacacgtgtacactagatttgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 33346436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 877384 - 877251
Alignment:
Q  31 aattgtagagagag--agtgctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 128  Q
    ||||||||||||||  || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||||| ||    
T  877384 aattgtagagagagggagagctttttgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcttatgattattatac 877285  T
Q  129 gtgtacactaaatctgatggttatgaagtgttta 162  Q
    ||||||||   |||| |||||| |||||||||||    
T  877284 gtgtacacctgatctaatggttgtgaagtgttta 877251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 18611304 - 18611232
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgttta 162  Q
    |||||||||||| ||||||| || ||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  18611304 ttgatttggtgtggtttgagaagcctatgattattacacgtgtacactagatctgatggttgtgaagtgttta 18611232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 29157341 - 29157245
Alignment:
Q  90 ttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttcctt 186  Q
    |||||||||||||||||||| || |||  |||||||||||||||||||| ||||||||||| | ||||||||| | ||||| |||||  ||||||||    
T  29157341 ttgatttggtgtagtttgagaagcctagtattattacacgtgtacactagatctgatggttgtaaagtgtttatgcacggtgcataaggatttcctt 29157245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 34399728 - 34399641
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    ||||||||||||||||||||| |||||||| || |||||||||||  |||||| |||||  |||||||||| |||| |||||||||||    
T  34399728 gattattacacgtgtacactagatctgatgattgtgaagtgtttatatacggtgcataaggatttccttatgcaccataacttttgcc 34399641  T

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Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 15034920 - 15035040
Alignment:
Q  90 ttgatttggtgtagtttgagg-----agtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttcc 184  Q
    ||||||||||||||||||||      || ||| ||||||||||| ||||||||| ||||||||||| ||||   |||| | ||||| |||||  ||||||    
T  15034920 ttgatttggtgtagtttgagaggagaagcctatgattattacacatgtacactagatctgatggttgtgaatgatttatgcacggtgcataaggatttcc 15035019  T
Q  185 ttatccaccgtaacttttgcc 205  Q
    |||| |||| |||||||||||    
T  15035020 ttatgcaccataacttttgcc 15035040  T

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Target: scaffold0238 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 208
Target Start/End: Original strand, 25094 - 25300
Alignment:
Q  13 gagatgaagactcatctgaattgtagagagagagt--gctttatgt---------tttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgt 101  Q
    |||||||||||||||||||||||||||||||| |   |||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  25094 gagatgaagactcatctgaattgtagagagagggaaagctttatgtctttatgtttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgt 25193  T
Q  102 agtttgaggagtctaagattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttt 201  Q
    |||||||| |  |||||||||| |||||||||||||||||||||||||| ||||||||||| | ||||| |||||  |||||||||| |||| |||||||    
T  25194 agtttgagaaacctaagattatgacacgtgtacactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttt 25293  T
Q  202 tgccaat 208  Q
    |||||||    
T  25294 tgccaat 25300  T

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Target: scaffold0097 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 31 - 206
Target Start/End: Complemental strand, 13789 - 13612
Alignment:
Q  31 aattgtagagagagagtg--ctttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacac 128  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||     
T  13789 aattgtagagagagggagaactttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcgtaggattattacat 13690  T
Q  129 gtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcca 206  Q
    |||||||||| ||||||||||| ||||||||||| | |||||  ||||  |||||||||| |||| ||||||||||||    
T  13689 gtgtacactagatctgatggttgtgaagtgtttatgcacggtggataaggatttccttatgcaccataacttttgcca 13612  T

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Target: scaffold0194 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 27762 - 27607
Alignment:
Q  50 tttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgaggagtctaagattattacacgtgtacactaaatctgatggt 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  |||||||||||||||||||| |||| || ||    
T  27762 tttatgttttagtgagagaaatgtttgaagcaaatgaagtttgatttggtgtagtttgagaagcctagaattattacacgtgtacactagatcttatagt 27663  T
Q  150 tatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgcc 205  Q
    | ||||||||||| | |||||||||||   ||||||||| |||| |||||||||||    
T  27662 tgtgaagtgtttatgcacggtacataagtttttccttatgcaccataacttttgcc 27607  T

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Target: scaffold0337 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 7104 - 7020
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaactttt 202  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||| | |||||  ||||| ||||| |||| |||| ||||||||    
T  7104 gattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtgtataaagatttcgttatgcaccataactttt 7020  T

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Target: scaffold0544 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 10653 - 10739
Alignment:
Q  118 gattattacacgtgtacactaaatctgatggttatgaagtgtttacgtacggtacataaaaatttccttatccaccgtaacttttgc 204  Q
    ||||||||||  || |||||| ||||||||||| ||||||||||| | |||||  ||||  |||||||||| |||| ||||||||||    
T  10653 gattattacatatgcacactagatctgatggttgtgaagtgtttatgcacggtgtataaggatttccttatgcaccataacttttgc 10739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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