View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7934_low_10 (Length: 292)
Name: NF7934_low_10
Description: NF7934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7934_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 271
Target Start/End: Complemental strand, 10605969 - 10605715
Alignment:
| Q |
15 |
atgaagcaaattactgtaaatattatcaaaagnnnnnnnnnngttaacatcacatacaagtgctttgttttgtgaagcatatcaagaccaggagtagttc |
114 |
Q |
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| T |
10605969 |
atgaagcaaattactgtaaatattatcaaaagaaaaaaaa--gttaacatcacatacaagtgctttgttttgtgaagcatatcaagaccaggagtagttc |
10605872 |
T |
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| Q |
115 |
cattagatactgggatgggaccctcaagctggttttctgctaagtctagccaattaatatttgacagattaccgatagaaggtggaattcttccactaaa |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
10605871 |
cattagatactgggatgggaccctcaagctggttttctgctaagtctagccaattaatatttgacagattaccaatagaaggtggaattcttccactaaa |
10605772 |
T |
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| Q |
215 |
tctattagaattcaaagatctgccatggaaattgacttagttactatagcacaaggt |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10605771 |
tctattagaattcaaagatctgccatggaaattgacttagttactatagcacaaggt |
10605715 |
T |
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