View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7938_low_3 (Length: 230)

Name: NF7938_low_3
Description: NF7938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7938_low_3
NF7938_low_3
[»] chr7 (58 HSPs)
chr7 (16-72)||(18424372-18424428)
chr7 (14-88)||(31994-32069)
chr7 (14-88)||(12713809-12713884)
chr7 (14-88)||(12717633-12717708)
chr7 (14-88)||(12722544-12722619)
chr7 (29-74)||(6170747-6170792)
chr7 (29-74)||(18278245-18278290)
chr7 (29-74)||(18282208-18282253)
chr7 (29-73)||(16582713-16582757)
chr7 (29-88)||(9390364-9390423)
chr7 (29-68)||(18301528-18301567)
chr7 (29-74)||(31975-32020)
chr7 (29-74)||(2531078-2531123)
chr7 (29-74)||(9752340-9752385)
chr7 (14-74)||(12705813-12705874)
chr7 (29-74)||(12713790-12713835)
chr7 (29-74)||(12717614-12717659)
chr7 (29-74)||(12722525-12722570)
chr7 (29-87)||(26291307-26291367)
chr7 (29-74)||(26291355-26291400)
chr7 (29-73)||(2833162-2833206)
chr7 (28-88)||(14270735-14270795)
chr7 (34-74)||(15112366-15112406)
chr7 (34-74)||(15115938-15115978)
chr7 (29-73)||(16582779-16582823)
chr7 (28-88)||(17231859-17231919)
chr7 (28-88)||(17231924-17231984)
chr7 (28-88)||(17231989-17232049)
chr7 (29-73)||(25928183-25928227)
chr7 (29-88)||(2531045-2531104)
chr7 (29-88)||(2833195-2833253)
chr7 (29-88)||(6170780-6170839)
chr7 (29-88)||(6170813-6170872)
chr7 (29-68)||(9390397-9390436)
chr7 (29-64)||(10607161-10607196)
chr7 (29-88)||(16582665-16582724)
chr7 (29-88)||(18278264-18278322)
chr7 (14-72)||(18278344-18278403)
chr7 (29-88)||(18282227-18282285)
chr7 (14-71)||(71968-72026)
chr7 (14-71)||(76077-76135)
chr7 (28-74)||(1859884-1859930)
chr7 (29-71)||(2833227-2833269)
chr7 (31-88)||(8467864-8467921)
chr7 (29-74)||(9752373-9752418)
chr7 (29-74)||(14270704-14270748)
chr7 (29-74)||(16582745-16582790)
chr7 (29-74)||(17231906-17231950)
chr7 (29-74)||(17231971-17232015)
chr7 (29-74)||(17232036-17232080)
chr7 (31-88)||(26291374-26291431)
chr7 (29-74)||(45171259-45171304)
chr7 (28-88)||(14270670-14270730)
chr7 (28-88)||(17232054-17232114)
chr7 (14-73)||(18282306-18282366)
chr7 (29-65)||(18423277-18423313)
chr7 (29-65)||(18424583-18424619)
chr7 (29-65)||(18639834-18639870)
[»] chr6 (34 HSPs)
chr6 (16-72)||(31479348-31479404)
chr6 (14-88)||(8242759-8242834)
chr6 (14-88)||(11565747-11565822)
chr6 (14-88)||(12619988-12620063)
chr6 (14-88)||(23988845-23988920)
chr6 (16-65)||(16622933-16622982)
chr6 (17-88)||(22948002-22948074)
chr6 (17-88)||(22951958-22952030)
chr6 (17-88)||(23870446-23870518)
chr6 (17-88)||(23874402-23874474)
chr6 (16-74)||(14471239-14471298)
chr6 (29-74)||(22075132-22075177)
chr6 (29-88)||(22075099-22075158)
chr6 (29-74)||(8242740-8242785)
chr6 (29-74)||(11565728-11565773)
chr6 (29-74)||(12620037-12620082)
chr6 (29-74)||(18953244-18953289)
chr6 (31-87)||(18953356-18953415)
chr6 (29-74)||(22947983-22948028)
chr6 (29-74)||(22951939-22951984)
chr6 (29-74)||(23870427-23870472)
chr6 (29-74)||(23874383-23874428)
chr6 (29-74)||(23988826-23988871)
chr6 (29-73)||(22075066-22075110)
chr6 (14-71)||(16759139-16759197)
chr6 (28-74)||(18319186-18319231)
chr6 (29-74)||(1643533-1643578)
chr6 (31-88)||(1643552-1643609)
chr6 (29-74)||(19869462-19869507)
chr6 (29-74)||(23393916-23393961)
chr6 (29-74)||(23413824-23413869)
chr6 (34-66)||(15874923-15874955)
chr6 (29-65)||(16623136-16623172)
chr6 (52-88)||(18953234-18953270)
[»] chr5 (27 HSPs)
chr5 (16-72)||(10751954-10752010)
chr5 (14-88)||(20294786-20294861)
chr5 (16-88)||(19473832-19473905)
chr5 (29-73)||(22108152-22108196)
chr5 (29-87)||(20912118-20912176)
chr5 (29-74)||(5889873-5889918)
chr5 (29-74)||(18355036-18355081)
chr5 (29-74)||(24768264-24768309)
chr5 (29-73)||(22120297-22120341)
chr5 (29-88)||(5889804-5889863)
chr5 (29-88)||(18355055-18355113)
chr5 (29-74)||(19473879-19473924)
chr5 (29-74)||(20294767-20294812)
chr5 (29-74)||(22108185-22108230)
chr5 (29-74)||(22120330-22120375)
chr5 (43-88)||(24768245-24768290)
chr5 (29-73)||(18355102-18355146)
chr5 (32-88)||(20912088-20912144)
chr5 (29-65)||(22108218-22108254)
chr5 (29-65)||(22120363-22120399)
chr5 (29-68)||(5889837-5889876)
chr5 (16-74)||(11226432-11226491)
chr5 (29-68)||(18355143-18355182)
chr5 (29-68)||(21742240-21742279)
chr5 (14-68)||(40727067-40727122)
chr5 (16-68)||(18355179-18355232)
chr5 (29-65)||(39244704-39244740)
[»] chr4 (31 HSPs)
chr4 (16-72)||(15223683-15223739)
chr4 (14-88)||(5757956-5758031)
chr4 (14-88)||(4562431-4562506)
chr4 (14-88)||(9555415-9555490)
chr4 (14-88)||(14758572-14758647)
chr4 (14-88)||(14955337-14955412)
chr4 (14-88)||(33741185-33741260)
chr4 (29-87)||(12423189-12423247)
chr4 (17-88)||(25688788-25688860)
chr4 (29-88)||(15189737-15189796)
chr4 (29-88)||(15189770-15189829)
chr4 (34-88)||(631582-631636)
chr4 (29-87)||(17048969-17049027)
chr4 (29-74)||(4562480-4562525)
chr4 (29-74)||(5758005-5758050)
chr4 (29-74)||(9555396-9555441)
chr4 (29-74)||(14758621-14758666)
chr4 (29-74)||(14955386-14955431)
chr4 (29-74)||(22634792-22634837)
chr4 (29-74)||(25688769-25688814)
chr4 (29-74)||(33741166-33741211)
chr4 (28-88)||(15481979-15482039)
chr4 (28-88)||(19857007-19857067)
chr4 (29-65)||(23996777-23996813)
chr4 (29-68)||(631610-631649)
chr4 (28-74)||(15481914-15481960)
chr4 (29-74)||(12486518-12486563)
chr4 (28-88)||(361549-361609)
chr4 (29-65)||(7641721-7641757)
chr4 (29-65)||(15355861-15355897)
chr4 (34-66)||(17994952-17994984)
[»] chr3 (66 HSPs)
chr3 (16-72)||(16751788-16751844)
chr3 (16-72)||(19774335-19774391)
chr3 (14-88)||(7108584-7108659)
chr3 (14-88)||(7112519-7112594)
chr3 (14-88)||(14498293-14498368)
chr3 (29-88)||(14667899-14667958)
chr3 (14-88)||(15616523-15616598)
chr3 (14-88)||(22320552-22320627)
chr3 (14-88)||(22335607-22335682)
chr3 (14-88)||(28948730-28948805)
chr3 (14-88)||(30064735-30064810)
chr3 (14-88)||(55021873-55021948)
chr3 (16-88)||(11069036-11069109)
chr3 (29-74)||(12853062-12853107)
chr3 (14-88)||(11166674-11166749)
chr3 (29-88)||(18440570-18440629)
chr3 (29-88)||(19485644-19485703)
chr3 (29-74)||(11301411-11301456)
chr3 (29-74)||(14667880-14667925)
chr3 (29-74)||(27410961-27411006)
chr3 (29-68)||(8490215-8490254)
chr3 (31-74)||(14664716-14664759)
chr3 (29-88)||(14664735-14664794)
chr3 (32-87)||(16795684-16795739)
chr3 (29-88)||(18440492-18440551)
chr3 (29-88)||(19485566-19485625)
chr3 (29-74)||(7108565-7108610)
chr3 (29-74)||(7112500-7112545)
chr3 (29-74)||(11069017-11069062)
chr3 (29-74)||(11166723-11166768)
chr3 (43-88)||(11301392-11301437)
chr3 (29-74)||(14498274-14498319)
chr3 (29-74)||(15616504-15616549)
chr3 (29-74)||(22320533-22320578)
chr3 (29-74)||(22335588-22335633)
chr3 (29-74)||(28948711-28948756)
chr3 (29-74)||(30064716-30064761)
chr3 (29-74)||(55021854-55021899)
chr3 (29-65)||(8490251-8490287)
chr3 (36-88)||(49390322-49390374)
chr3 (29-87)||(14067919-14067980)
chr3 (29-68)||(17318336-17318375)
chr3 (29-68)||(17318372-17318411)
chr3 (29-67)||(1466061-1466099)
chr3 (29-67)||(1466102-1466140)
chr3 (14-71)||(4108385-4108443)
chr3 (14-71)||(4112237-4112295)
chr3 (36-70)||(4590027-4590061)
chr3 (16-73)||(14067674-14067732)
chr3 (28-74)||(15464114-15464160)
chr3 (29-67)||(49390348-49390386)
chr3 (29-74)||(4589911-4589955)
chr3 (29-74)||(15963772-15963817)
chr3 (29-74)||(15967696-15967741)
chr3 (29-74)||(15971620-15971665)
chr3 (29-66)||(16795741-16795778)
chr3 (29-65)||(6469694-6469730)
chr3 (29-65)||(12853095-12853131)
chr3 (29-65)||(15977066-15977102)
chr3 (29-65)||(16751598-16751634)
chr3 (29-65)||(19774530-19774566)
chr3 (29-65)||(21618029-21618065)
chr3 (52-88)||(27410951-27410987)
chr3 (29-65)||(28849174-28849210)
chr3 (29-65)||(36166135-36166171)
chr3 (29-65)||(45578386-45578422)
[»] chr1 (45 HSPs)
chr1 (16-72)||(41389547-41389603)
chr1 (16-72)||(39245099-39245155)
chr1 (16-72)||(39248654-39248710)
chr1 (14-88)||(1009608-1009683)
chr1 (14-88)||(1926299-1926374)
chr1 (14-88)||(16376550-16376625)
chr1 (14-88)||(20925313-20925388)
chr1 (14-88)||(52634694-52634769)
chr1 (29-88)||(28195094-28195153)
chr1 (29-88)||(35982327-35982386)
chr1 (29-87)||(22131898-22131956)
chr1 (29-74)||(20229969-20230014)
chr1 (29-74)||(21406534-21406579)
chr1 (29-74)||(22131829-22131874)
chr1 (29-74)||(33796272-33796317)
chr1 (29-68)||(21406430-21406469)
chr1 (29-68)||(22131862-22131901)
chr1 (29-68)||(33796415-33796454)
chr1 (30-88)||(33796291-33796348)
chr1 (29-74)||(1009589-1009634)
chr1 (29-74)||(1926348-1926393)
chr1 (29-74)||(16376599-16376644)
chr1 (31-88)||(20229938-20229995)
chr1 (29-74)||(20925362-20925407)
chr1 (29-74)||(52634675-52634720)
chr1 (34-74)||(12271042-12271082)
chr1 (44-88)||(21406553-21406597)
chr1 (29-73)||(33796338-33796382)
chr1 (28-88)||(41306223-41306283)
chr1 (29-73)||(41801080-41801124)
chr1 (29-88)||(20315609-20315668)
chr1 (29-88)||(20315797-20315855)
chr1 (29-68)||(22131793-22131832)
chr1 (16-74)||(33796442-33796501)
chr1 (29-68)||(35982360-35982399)
chr1 (28-74)||(20315746-20315792)
chr1 (28-74)||(20315779-20315824)
chr1 (28-74)||(21740400-21740446)
chr1 (29-74)||(41306257-41306301)
chr1 (29-61)||(20230002-20230034)
chr1 (34-74)||(21740341-21740381)
chr1 (28-88)||(21740465-21740525)
chr1 (29-65)||(39244909-39244945)
chr1 (29-65)||(39248464-39248500)
chr1 (29-65)||(41389357-41389393)
[»] scaffold0349 (2 HSPs)
scaffold0349 (14-88)||(11402-11477)
scaffold0349 (29-74)||(11383-11428)
[»] chr8 (21 HSPs)
chr8 (14-88)||(22110936-22111011)
chr8 (14-88)||(43250696-43250771)
chr8 (14-88)||(21973687-21973762)
chr8 (28-88)||(1323713-1323773)
chr8 (29-74)||(21973736-21973781)
chr8 (14-78)||(21977778-21977843)
chr8 (29-74)||(21977846-21977891)
chr8 (29-74)||(22110917-22110962)
chr8 (29-74)||(43250677-43250722)
chr8 (29-88)||(20983505-20983564)
chr8 (32-74)||(20983541-20983583)
chr8 (14-71)||(21829137-21829195)
chr8 (29-74)||(1323747-1323791)
chr8 (29-74)||(14398839-14398884)
chr8 (37-74)||(20983480-20983517)
chr8 (55-88)||(21977839-21977872)
chr8 (29-74)||(30941323-30941368)
chr8 (28-88)||(13428678-13428738)
chr8 (29-65)||(20046715-20046751)
chr8 (28-88)||(38550621-38550681)
chr8 (28-88)||(38550686-38550746)
[»] chr2 (19 HSPs)
chr2 (14-88)||(10102954-10103029)
chr2 (14-88)||(24629625-24629700)
chr2 (14-88)||(27600717-27600792)
chr2 (14-88)||(30346161-30346236)
chr2 (14-88)||(27384544-27384619)
chr2 (14-86)||(27380498-27380571)
chr2 (29-88)||(31344221-31344279)
chr2 (29-74)||(10103003-10103048)
chr2 (14-74)||(24648254-24648315)
chr2 (29-74)||(27600698-27600743)
chr2 (29-74)||(30346210-30346255)
chr2 (29-73)||(24629674-24629718)
chr2 (31-74)||(31344202-31344245)
chr2 (29-74)||(1282299-1282344)
chr2 (33-74)||(27384597-27384638)
chr2 (29-74)||(41532201-41532246)
chr2 (34-66)||(20634480-20634512)
chr2 (29-65)||(28576693-28576729)
chr2 (29-65)||(45030404-45030440)
[»] scaffold0601 (4 HSPs)
scaffold0601 (29-88)||(8575-8634)
scaffold0601 (29-88)||(8608-8667)
scaffold0601 (29-74)||(8542-8587)
scaffold0601 (29-74)||(8641-8686)
[»] scaffold0525 (2 HSPs)
scaffold0525 (14-88)||(5004-5079)
scaffold0525 (29-74)||(5053-5098)
[»] scaffold0486 (2 HSPs)
scaffold0486 (31-74)||(8866-8909)
scaffold0486 (29-88)||(8885-8944)
[»] scaffold0327 (4 HSPs)
scaffold0327 (29-88)||(19128-19187)
scaffold0327 (29-74)||(19109-19154)
scaffold0327 (29-88)||(19232-19291)
scaffold0327 (29-74)||(19213-19258)
[»] scaffold0200 (2 HSPs)
scaffold0200 (29-88)||(11061-11120)
scaffold0200 (29-74)||(11042-11087)
[»] scaffold0372 (1 HSPs)
scaffold0372 (14-87)||(6165-6239)
[»] scaffold0165 (4 HSPs)
scaffold0165 (29-87)||(2886-2944)
scaffold0165 (29-87)||(6949-7007)
scaffold0165 (29-74)||(2932-2977)
scaffold0165 (29-74)||(6995-7040)
[»] scaffold0380 (3 HSPs)
scaffold0380 (29-74)||(936-981)
scaffold0380 (29-68)||(829-868)
scaffold0380 (44-88)||(955-999)
[»] scaffold0166 (2 HSPs)
scaffold0166 (29-74)||(10761-10806)
scaffold0166 (43-88)||(10742-10787)
[»] scaffold0029 (4 HSPs)
scaffold0029 (29-74)||(79409-79454)
scaffold0029 (29-88)||(79428-79486)
scaffold0029 (16-73)||(79475-79533)
scaffold0029 (31-87)||(62706-62765)
[»] scaffold0004 (3 HSPs)
scaffold0004 (28-88)||(362057-362117)
scaffold0004 (28-74)||(362169-362215)
scaffold0004 (34-74)||(362234-362274)
[»] scaffold0124 (2 HSPs)
scaffold0124 (29-87)||(25433-25491)
scaffold0124 (29-74)||(25400-25445)
[»] scaffold0061 (1 HSPs)
scaffold0061 (14-74)||(68326-68387)
[»] scaffold0013 (1 HSPs)
scaffold0013 (29-74)||(74072-74117)
[»] scaffold0293 (1 HSPs)
scaffold0293 (29-73)||(21151-21195)
[»] scaffold0278 (2 HSPs)
scaffold0278 (28-88)||(6963-7023)
scaffold0278 (28-88)||(7028-7088)
[»] scaffold0116 (3 HSPs)
scaffold0116 (28-88)||(44420-44480)
scaffold0116 (28-88)||(44485-44545)
scaffold0116 (29-74)||(44454-44498)
[»] scaffold0484 (1 HSPs)
scaffold0484 (29-68)||(21-60)
[»] scaffold0109 (1 HSPs)
scaffold0109 (29-87)||(37065-37126)
[»] scaffold0230 (2 HSPs)
scaffold0230 (28-74)||(21238-21283)
scaffold0230 (28-74)||(24168-24213)
[»] scaffold0157 (1 HSPs)
scaffold0157 (29-74)||(33914-33959)
[»] scaffold0141 (1 HSPs)
scaffold0141 (29-74)||(15333-15378)
[»] scaffold0017 (1 HSPs)
scaffold0017 (28-88)||(8527-8588)
[»] scaffold0674 (1 HSPs)
scaffold0674 (34-66)||(3028-3060)
[»] scaffold0142 (1 HSPs)
scaffold0142 (29-65)||(8514-8550)
[»] scaffold0022 (1 HSPs)
scaffold0022 (29-65)||(116000-116036)
[»] scaffold0008 (1 HSPs)
scaffold0008 (29-65)||(71509-71545)


Alignment Details
Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 18424428 - 18424372
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18424428 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttatat 18424372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 32069 - 31994
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  32069 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 31994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 12713884 - 12713809
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  12713884 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12713809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 12717708 - 12717633
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  12717708 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12717633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 12722619 - 12722544
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  12722619 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12722544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 6170747 - 6170792
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  6170747 tgttgttatattattataagatgatgaatatgttgttgttatatta 6170792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 18278290 - 18278245
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  18278290 tgttgttatattaatataagaagatgaatatgttgttgttatatta 18278245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 18282253 - 18282208
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  18282253 tgttgttatattaatataagaagatgaatatgttgttgttatatta 18282208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 16582757 - 16582713
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  16582757 tgttgttatattattataaaatgatgagtatgttgttgttatatt 16582713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 9390364 - 9390423
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||| || |||| |||||    
T  9390364 tgttgttatattattataagatgatgaatatgatgttgttatattattataagatgatga 9390423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 18301567 - 18301528
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  18301567 tgttgttatattattataaaatgatgaatatgttgttgtt 18301528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 32020 - 31975
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  32020 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 31975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 2531078 - 2531123
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||    
T  2531078 tgttgttatattaatataagaagatgaacatgttgttgttatatta 2531123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 9752340 - 9752385
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||    
T  9752340 tgttgttatattattatatgatgatgaatatgttgttgttatatta 9752385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 12705813 - 12705874
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| |||||| |||||||   |||||| ||||||||||||||||||||||||    
T  12705813 tttggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttatatta 12705874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 12713835 - 12713790
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  12713835 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 12713790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 12717659 - 12717614
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  12717659 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 12717614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 12722570 - 12722525
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  12722570 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 12722525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 26291367 - 26291307
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgt--tgttgttatattaatacaagaagatg 87  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||||| || |||||||||    
T  26291367 tgttgttatattattataaaatgatgaatatgtcgtgttggtatattattataagaagatg 26291307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 26291400 - 26291355
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||    
T  26291400 tgttgttatattaatataagaaaatgaatatgttgttgttatatta 26291355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 2833162 - 2833206
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||    
T  2833162 tgttgttatatttttataagatgatgaatatgttgttgttatatt 2833206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 14270735 - 14270795
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  14270735 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 14270795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 15112406 - 15112366
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  15112406 ttatattattataagatgatgaatatgttgttgttatatta 15112366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 15115978 - 15115938
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  15115978 ttatattattataagatgatgaatatgttgttgttatatta 15115938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 16582823 - 16582779
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||    
T  16582823 tgttgttatattattataaaataatgagtatgttgttgttatatt 16582779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 17231919 - 17231859
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  17231919 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 17231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 17231984 - 17231924
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  17231984 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 17231924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 17232049 - 17231989
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  17232049 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 17231989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 25928183 - 25928227
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||    
T  25928183 tgttgttatatttttataagatgatgaatatgttgttgttatatt 25928227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 2531045 - 2531104
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||   |||| ||||||| || |||||||||||||||||| ||||||||||    
T  2531045 tgttgttatattttcataagatgatgattacgttgttgttatattaatataagaagatga 2531104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 2833195 - 2833253
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| |||||||||| ||||||||||||||| || ||||||||||    
T  2833195 tgttgttatattt-tataagatgatgaatacgttgttgttatattattataagaagatga 2833253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 6170780 - 6170839
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| ||||| ||||||||||||| |||||| || |||| |||||    
T  6170780 tgttgttatattattataagatgatcaatatgttgttgtcatattattataagatgatga 6170839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 6170813 - 6170872
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||| |||||| ||||| ||||||||||||||||||| |||||| || |||| |||||    
T  6170813 tgttgtcatattattataagatgatgaatatgttgttgtcatattattataagatgatga 6170872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 9390397 - 9390436
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  9390397 tgttgttatattattataagatgatgaatatgttgttgtt 9390436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 10607161 - 10607196
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgt 64  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10607161 tgttgttatattattataaaatgatgaatatgttgt 10607196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 16582724 - 16582665
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| ||| |||||||||||||||||||||| || |||| |||||    
T  16582724 tgttgttatatttctataagatggtgaatatgttgttgttatattattataagatgatga 16582665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 18278322 - 18278264
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| ||||||||||  ||||||||||||||||| ||||||||||    
T  18278322 tgttgttatattt-tataagatgatgaatacattgttgttatattaatataagaagatga 18278264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 18278403 - 18278344
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    ||||||||||||| |||||| ||||||| |||||| |||||||||| ||||||| |||||    
T  18278403 tttggtgttagtatgtgttgattatatttatataagatgatgaatacgttgttgctatat 18278344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 18282285 - 18282227
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| ||||||||||  ||||||||||||||||| ||||||||||    
T  18282285 tgttgttatattt-tataagatgatgaatacattgttgttatattaatataagaagatga 18282227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 71968 - 72026
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttata 71  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| |||||    
T  71968 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 72026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 76077 - 76135
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttata 71  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| |||||    
T  76077 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 76135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 1859884 - 1859930
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||||    
T  1859884 gtgttgttatattactatatgatgatgaatatgttgctgttatatta 1859930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 2833227 - 2833269
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttata 71  Q
    ||||||||||||| ||||| | |||||||||||||||||||||    
T  2833227 tgttgttatattattataagaagatgaatatgttgttgttata 2833269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 8467921 - 8467864
Alignment:
Q  31 ttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  8467921 ttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 8467864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 9752373 - 9752418
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  || |||||||||||||||||||||||    
T  9752373 tgttgttatattactatatgattatgaatatgttgttgttatatta 9752418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 14270704 - 14270748
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||    
T  14270704 tgttgttatattattataagatgatgaatatg-tgttgttatatta 14270748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 16582790 - 16582745
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||  ||||| ||| ||||||||||||||||||||||    
T  16582790 tgttgttatatttctataagatggtgaatatgttgttgttatatta 16582745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 17231950 - 17231906
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||    
T  17231950 tgttgttatattattataagatgatgaatatg-tgttgttatatta 17231906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 17232015 - 17231971
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||    
T  17232015 tgttgttatattattataagatgatgaatatg-tgttgttatatta 17231971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 17232080 - 17232036
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||    
T  17232080 tgttgttatattattataagatgatgaatatg-tgttgttatatta 17232036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 26291431 - 26291374
Alignment:
Q  31 ttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||   |||| |||||||||| |||||||||||||||||| ||||| ||||    
T  26291431 ttgttatattttcataagatgatgaatacgttgttgttatattaatataagaaaatga 26291374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 45171259 - 45171304
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  45171259 tgttgttatattattatatgaagatgaatatgttgttgttatatta 45171304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 14270670 - 14270730
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | ||||||||||| |||||||||||||| || |||| |||||    
T  14270670 gtgttgttatattatgatgagatgatgaatattttgttgttatattattataagatgatga 14270730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 17232114 - 17232054
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||| |||  || | |||||||||||||||||||||||||| || |||| |||||    
T  17232114 gtgttgttatgttatgatgagatgatgaatatgttgttgttatattattataagatgatga 17232054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 18282366 - 18282306
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||| |||||| ||||||| |||||| |||||||||| || |||| ||||||    
T  18282366 tttggtgttagtatgtgttgattatatttatataagatgatgaatacgtcgttgctatatt 18282306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 18423313 - 18423277
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  18423313 tgttgttatatcaatataagatgatgaatatgttgtt 18423277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 18424619 - 18424583
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  18424619 tgttgttatattattataaagtgatgaatatgttgtt 18424583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 18639870 - 18639834
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  18639870 tgttgttatatcaatataagatgatgaatatgttgtt 18639834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 31479348 - 31479404
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31479348 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttatat 31479404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 8242834 - 8242759
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  8242834 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 8242759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 11565822 - 11565747
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  11565822 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 11565747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 12619988 - 12620063
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  12619988 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12620063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 23988920 - 23988845
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  23988920 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 23988845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 16622982 - 16622933
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16622982 tggtgttagtacgtgttgttatattaatataaaatgatagatatgttgtt 16622933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 22948074 - 22948002
Alignment:
Q  17 ggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  22948074 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22948002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 22952030 - 22951958
Alignment:
Q  17 ggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  22952030 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22951958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 23870518 - 23870446
Alignment:
Q  17 ggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  23870518 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 23870446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 23874474 - 23874402
Alignment:
Q  17 ggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  23874474 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 23874402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 14471298 - 14471239
Alignment:
Q  16 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||    
T  14471298 tggtgttagtatgtgttgattatattaatataagaagatgaatatgttgttgttatatta 14471239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 22075132 - 22075177
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  22075132 tgttgttatattaatataagaagatgaatatgttgttgttatatta 22075177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 22075099 - 22075158
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| ||||| |||| |||||||||||||||||| ||||||||||    
T  22075099 tgttgttatatttttataagatgattaatangttgttgttatattaatataagaagatga 22075158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 8242785 - 8242740
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  8242785 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 8242740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 11565773 - 11565728
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  11565773 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 11565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 12620037 - 12620082
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  12620037 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 12620082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 18953244 - 18953289
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||    
T  18953244 tgttgttatattaatataagaagatgaatatgttattgttatatta 18953289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 18953356 - 18953415
Alignment:
Q  31 ttgttatattaatataaaatgatgaatat---gttgttgttatattaatacaagaagatg 87  Q
    ||||||||||| |||||||||||||||||   ||||||||||||||| || |||||||||    
T  18953356 ttgttatattattataaaatgatgaatatgtcgttgttgttatattattataagaagatg 18953415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 22948028 - 22947983
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  22948028 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 22947983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 22951984 - 22951939
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  22951984 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 22951939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 23870472 - 23870427
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  23870472 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 23870427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 23874428 - 23874383
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  23874428 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 23874383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 23988871 - 23988826
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  23988871 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 23988826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 22075066 - 22075110
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||    
T  22075066 tgttgttatatttttataagatgatgaatatgttgttgttatatt 22075110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 16759197 - 16759139
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttata 71  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| |||||    
T  16759197 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 16759139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 18319231 - 18319186
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||    
T  18319231 gtgttgttatattactataagatgatgaatatg-tgttgttatatta 18319186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 1643578 - 1643533
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||||||   ||||||||| ||||||||||||||    
T  1643578 tgttgttatattaatataaggagatgaatatattgttgttatatta 1643533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 1643609 - 1643552
Alignment:
Q  31 ttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||   |||| |||||||||| |||||||||||||||||| ||| ||||||    
T  1643609 ttgttatattttcataagatgatgaatacgttgttgttatattaatataaggagatga 1643552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 19869507 - 19869462
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  19869507 tgttgttatattattatatgaagatgaatatgttgttgttatatta 19869462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 23393961 - 23393916
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  23393961 tgttgttatattattatatgaagatgaatatgttgttgttatatta 23393916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 23413869 - 23413824
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  23413869 tgttgttatattattatatgaagatgaatatgttgttgttatatta 23413824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 15874955 - 15874923
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttg 66  Q
    |||||||| ||||||||||||||||||||||||    
T  15874955 ttatattattataaaatgatgaatatgttgttg 15874923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 16623172 - 16623136
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  16623172 tgttgttatattattataaagtgatgaatatgttgtt 16623136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 18953234 - 18953270
Alignment:
Q  52 atgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  18953234 atgaacatgttgttgttatattaatataagaagatga 18953270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 10752010 - 10751954
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10752010 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttatat 10751954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 20294861 - 20294786
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  20294861 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 20294786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 19473832 - 19473905
Alignment:
Q  16 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  19473832 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 19473905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 22108152 - 22108196
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  22108152 tgttgttatattattataaaatgatgaatatgttgttgttatatt 22108196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 20912118 - 20912176
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatg 87  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| || |||| ||||    
T  20912118 tgttgttatattaatataagaagatgaatatgttgttgttatattattataagatgatg 20912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 5889873 - 5889918
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  5889873 tgttgttatattattataagatgatgaatatgttgttgttatatta 5889918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 18355081 - 18355036
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  18355081 tgttgttatattaatataagaagatgaatatgttgttgttatatta 18355036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 24768264 - 24768309
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  24768264 tgttgttatattaatataagaagatgaatatgttgttgttatatta 24768309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 22120297 - 22120341
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  22120297 tgttgttatattattataaaatgatgagtatgttgttgttatatt 22120341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 5889804 - 5889863
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||| || |||| |||||    
T  5889804 tgttgttatattattataagatgatgaatatgatgttgttatattattataagatgatga 5889863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 18355113 - 18355055
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  18355113 tgttgttatattt-tataagatgatgaatacgttgttgttatattaatataagaagatga 18355055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 19473879 - 19473924
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  19473879 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 19473924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 20294812 - 20294767
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  20294812 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 20294767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 22108185 - 22108230
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||    
T  22108185 tgttgttatatttttataagatgatgaatatgttgttgttatatta 22108230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 22120330 - 22120375
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||    
T  22120330 tgttgttatatttctataagatgatgaatatgttgttgttatatta 22120375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 24768245 - 24768290
Alignment:
Q  43 tataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  24768245 tataagatgatgaatacgttgttgttatattaatataagaagatga 24768290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 18355146 - 18355102
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||    
T  18355146 tgttgttaaattattataaaatgataaatatgttgttgttatatt 18355102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 20912088 - 20912144
Alignment:
Q  32 tgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||| |||   ||||||||||| ||||||||||||||||| ||||||||||    
T  20912088 tgttatattattatgtgatgatgaatatattgttgttatattaatataagaagatga 20912144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 22108218 - 22108254
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22108218 tgttgttatattattataaaatgatgaatatgttgtt 22108254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 22120363 - 22120399
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22120363 tgttgttatattattataaaatgatgaatatgttgtt 22120399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 5889837 - 5889876
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  5889837 tgttgttatattattataagatgatgaatatgttgttgtt 5889876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 11226491 - 11226432
Alignment:
Q  16 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||| |||||| |||||||   |||| ||||||||||||||||||||||||||    
T  11226491 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttatatta 11226432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 18355182 - 18355143
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  18355182 tgtttttatattattataaaatgatgaatatgttgttgtt 18355143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 21742240 - 21742279
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  21742240 tgttgttatattattataagatgatgaatatgttgttgtt 21742279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 40727067 - 40727122
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||||||    
T  40727067 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgtt 40727122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 18355232 - 18355179
Alignment:
Q  16 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||| |||||| |||||||  ||||| ||||||||||||||||||||    
T  18355232 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgtt 18355179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 39244740 - 39244704
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  39244740 tgttgttatatcaatataagatgatgaatatgttgtt 39244704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 15223739 - 15223683
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15223739 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttatat 15223683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 5757956 - 5758031
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| ||||||||||||||||||||||||||||||||||||||||    
T  5757956 tttggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttatattaatacaagaagatga 5758031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 4562431 - 4562506
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  4562431 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 4562506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 9555490 - 9555415
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  9555490 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 9555415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 14758572 - 14758647
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  14758572 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 14758647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 14955337 - 14955412
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  14955337 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 14955412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 33741260 - 33741185
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  33741260 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 33741185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 12423247 - 12423189
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatg 87  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||    
T  12423247 tgttgttatattattataaaatgatgaatatgttgttgttatattattataagacgatg 12423189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 25688860 - 25688788
Alignment:
Q  17 ggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  25688860 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 25688788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 15189796 - 15189737
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||||    
T  15189796 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatga 15189737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 15189829 - 15189770
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||||    
T  15189829 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatga 15189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 631582 - 631636
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||| |||||||||||||||||||||||||||||||| || || |||||||    
T  631582 ttatattattataaaatgatgaatatgttgttgttatattattataaaaagatga 631636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 17048969 - 17049027
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatg 87  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| || |||| ||||    
T  17048969 tgttgttatattattataaaatgatgaacatgttgttgttatattattataagatgatg 17049027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 4562480 - 4562525
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  4562480 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 4562525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 5758005 - 5758050
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  5758005 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 5758050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 9555441 - 9555396
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  9555441 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 9555396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 14758621 - 14758666
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  14758621 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 14758666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 14955386 - 14955431
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  14955386 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 14955431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 22634792 - 22634837
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||    
T  22634792 tgttgttatattattatatgatgatgaatatgttgttgttatatta 22634837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 25688814 - 25688769
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  25688814 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 25688769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 33741211 - 33741166
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  33741211 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 33741166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 15481979 - 15482039
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  15481979 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 15482039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 19857067 - 19857007
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  19857067 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 19857007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 23996777 - 23996813
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||||||||||||||||||||    
T  23996777 tgttgttatattattataaaatgatgaatatgttgtt 23996813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 631610 - 631649
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  631610 tgttgttatattattataaaaagatgaatatgttgttgtt 631649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 15481914 - 15481960
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||  || | ||||||||||||||||||||||||||    
T  15481914 gtgttgttatattatgatgagatgatgaatatgttgttgttatatta 15481960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 12486563 - 12486518
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  12486563 tgttgttatattattatatgaagatgaatatgttgttgttatatta 12486518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 361609 - 361549
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | ||||||||||||||| |||||||||| || |||| |||||    
T  361609 gtgttgttatattatgatgagatgatgaatatgttgctgttatattattataagatgatga 361549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 7641721 - 7641757
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  7641721 tgttgttatatcaatataagatgatgaatatgttgtt 7641757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 15355861 - 15355897
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  15355861 tgttgttatatcaatataagatgatgaatatgttgtt 15355897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 17994952 - 17994984
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttg 66  Q
    |||||||| ||||||||||||||||||||||||    
T  17994952 ttatattattataaaatgatgaatatgttgttg 17994984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 16751788 - 16751844
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16751788 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttatat 16751844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 19774391 - 19774335
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  19774391 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgctgatatat 19774335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 7108659 - 7108584
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  7108659 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 7108584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 7112594 - 7112519
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  7112594 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 7112519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 14498368 - 14498293
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  14498368 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 14498293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 14667958 - 14667899
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  14667958 tgttgttatatttttataagatgatgaatatgttgttgttatattaatataagaagatga 14667899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 15616598 - 15616523
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  15616598 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 15616523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 22320627 - 22320552
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  22320627 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22320552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 22335682 - 22335607
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  22335682 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22335607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 28948805 - 28948730
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  28948805 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 28948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 30064810 - 30064735
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  30064810 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 30064735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 55021948 - 55021873
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  55021948 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 55021873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 11069109 - 11069036
Alignment:
Q  16 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  11069109 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 11069036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 12853062 - 12853107
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  12853062 tgttgttatattattataaaatgatgaatatgttgttgttatatta 12853107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 11166674 - 11166749
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| ||||||||||||||||||||||| |||||    
T  11166674 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaggatga 11166749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 18440570 - 18440629
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||||    
T  18440570 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatga 18440629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 19485644 - 19485703
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||||    
T  19485644 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatga 19485703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 11301411 - 11301456
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  11301411 tgttgttatattaatataagaagatgaatatgttgttgttatatta 11301456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 14667925 - 14667880
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  14667925 tgttgttatattaatataagaagatgaatatgttgttgttatatta 14667880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 27410961 - 27411006
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  27410961 tgttgttatattaatataagaagatgaatatgttgttgttatatta 27411006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 8490215 - 8490254
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  8490215 tgttgttatattattataaaatgatgaatatgttgttgtt 8490254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 14664759 - 14664716
Alignment:
Q  31 ttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  14664759 ttgttatattaatataagaagatgaatatgttgttgttatatta 14664716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 14664794 - 14664735
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| |||||||||| ||| |||||||||||||| ||||||||||    
T  14664794 tgttgttatatttttataagatgatgaatacgtttttgttatattaatataagaagatga 14664735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 16795739 - 16795684
Alignment:
Q  32 tgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatg 87  Q
    |||||||||| ||||||||||||||||||| |||||||||||| || |||| ||||    
T  16795739 tgttatattattataaaatgatgaatatgtggttgttatattattataagatgatg 16795684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 18440492 - 18440551
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||| || |||| |||||    
T  18440492 tgttgttatattattataagatgatgaatatgttgttgctatattattataagatgatga 18440551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 19485566 - 19485625
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||| || |||| |||||    
T  19485566 tgttgttatattattataagatgatgaatatgttgttgctatattattataagatgatga 19485625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 7108610 - 7108565
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  7108610 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 7108565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 7112545 - 7112500
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  7112545 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 7112500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 11069062 - 11069017
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  11069062 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 11069017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 11166723 - 11166768
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  11166723 tgttgttatattaatacaagaggatgaatatgttgttgttatatta 11166768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 11301392 - 11301437
Alignment:
Q  43 tataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  11301392 tataagatgatgaatacgttgttgttatattaatataagaagatga 11301437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 14498319 - 14498274
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  14498319 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 14498274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 15616549 - 15616504
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  15616549 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 15616504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 22320578 - 22320533
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  22320578 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 22320533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 22335633 - 22335588
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  22335633 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 22335588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 28948756 - 28948711
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  28948756 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 28948711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 30064761 - 30064716
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  30064761 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 30064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 55021899 - 55021854
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  55021899 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 55021854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 8490251 - 8490287
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8490251 tgttgttatattattataaaatgatgaatatgttgtt 8490287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 49390322 - 49390374
Alignment:
Q  36 atattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||| ||||| |||||||||||||||||||||||||| || |||| |||||    
T  49390322 atattattataagatgatgaatatgttgttgttatattattataagatgatga 49390374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 14067919 - 14067980
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgtt---gttgttatattaatacaagaagatg 87  Q
    ||||||||||||| ||||||||||||| ||||||   |||||||||||| || |||||||||    
T  14067919 tgttgttatattattataaaatgatgactatgttgttgttgttatattactataagaagatg 14067980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 17318336 - 17318375
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  17318336 tgttgttatattattataaaatgacgaatatgttgttgtt 17318375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 17318372 - 17318411
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  17318372 tgttgttatattattataatatgatgaatatgttgttgtt 17318411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 1466061 - 1466099
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgt 67  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  1466061 tgttgttatattattataagatgatgaatatgttgttgt 1466099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 1466102 - 1466140
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgt 67  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  1466102 tgttgttatattattataagatgatgaatatgttgttgt 1466140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 4108385 - 4108443
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttata 71  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| |||||    
T  4108385 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 4108443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 4112237 - 4112295
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttata 71  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| |||||    
T  4112237 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 4112295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 4590027 - 4590061
Alignment:
Q  36 atattaatataaaatgatgaatatgttgttgttat 70  Q
    |||||| ||||||||||||||||||||||||||||    
T  4590027 atattattataaaatgatgaatatgttgttgttat 4590061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 14067674 - 14067732
Alignment:
Q  16 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    |||||| |||| |||||| ||||||| |||||| |||||||||| ||||||||||||||    
T  14067674 tggtgtcagtatgtgttgattatatttatataagatgatgaatacgttgttgttatatt 14067732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 15464160 - 15464114
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||| ||||  | ||||||||||||||||||||||||    
T  15464160 gtgttgttatattattatatgacgatgaatatgttgttgttatatta 15464114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 49390348 - 49390386
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgt 67  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  49390348 tgttgttatattattataagatgatgaatatgttgttgt 49390386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 4589911 - 4589955
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||    
T  4589911 tgttgttatat-aatataagaagatgaatatgttgttgttatatta 4589955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 15963817 - 15963772
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  15963817 tgttgttatattattatatgaagatgaatatgttgttgttatatta 15963772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 15967741 - 15967696
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  15967741 tgttgttatattattatatgaagatgaatatgttgttgttatatta 15967696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 15971665 - 15971620
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  15971665 tgttgttatattattatatgaagatgaatatgttgttgttatatta 15971620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 16795778 - 16795741
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttg 66  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  16795778 tgttgttatattattataaaatgatgaatatcttgttg 16795741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 6469694 - 6469730
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  6469694 tgttgttatatcaatataagatgatgaatatgttgtt 6469730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 12853095 - 12853131
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  12853095 tgttgttatattactattaaatgatgaatatgttgtt 12853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 15977102 - 15977066
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  15977102 tgttgttatatcaatataagatgatgaatatgttgtt 15977066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 16751598 - 16751634
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  16751598 tgttgttatattattataaagtgatgaatatgttgtt 16751634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 19774566 - 19774530
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  19774566 tgttgttatattattataaagtgatgaatatgttgtt 19774530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 21618065 - 21618029
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  21618065 tgttgttatatcaatataagatgatgaatatgttgtt 21618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 27410951 - 27410987
Alignment:
Q  52 atgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  27410951 atgaacatgttgttgttatattaatataagaagatga 27410987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 28849174 - 28849210
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  28849174 tgttgttatatcaatataagatgatgaatatgttgtt 28849210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 36166171 - 36166135
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  36166171 tgttgttatatcaatataagatgatgaatatgttgtt 36166135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 45578386 - 45578422
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  45578386 tgttgttatatcaatataagatgatgaatatgttgtt 45578422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 41389547 - 41389603
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41389547 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttatat 41389603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 39245099 - 39245155
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  39245099 tggtgttagtacgtgttgttatattaatataaaatgatagatatgttgttgttatat 39245155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 39248654 - 39248710
Alignment:
Q  16 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatat 72  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  39248654 tggtgttagtacgtgttgttatattaatataaaatgatagatatgttgttgttatat 39248710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 1009683 - 1009608
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  1009683 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 1009608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 1926299 - 1926374
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  1926299 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 1926374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 16376550 - 16376625
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  16376550 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 16376625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 20925313 - 20925388
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  20925313 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 20925388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 52634769 - 52634694
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  52634769 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 52634694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 28195094 - 28195153
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||||    
T  28195094 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatga 28195153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 35982327 - 35982386
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||||    
T  35982327 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatga 35982386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 22131898 - 22131956
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatg 87  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| || |||| ||||    
T  22131898 tgttgttatattattataaaatggtgaatatgttgttgttatattattataagatgatg 22131956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 20229969 - 20230014
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  20229969 tgttgttatattaatataagaagatgaatatgttgttgttatatta 20230014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 21406579 - 21406534
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  21406579 tgttgttatattaatataagaagatgaatatgttgttgttatatta 21406534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 22131829 - 22131874
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||    
T  22131829 tgttgttatattattataaaatgatgaacatgttgttgttatatta 22131874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 33796317 - 33796272
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  33796317 tgttgttatattaatataagaagatgaatatgttgttgttatatta 33796272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 21406469 - 21406430
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  21406469 tgttgttatattattataaaatgatgaatatgttgttgtt 21406430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 22131862 - 22131901
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  22131862 tgttgttatattattataaaatgatgaatatgttgttgtt 22131901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 33796454 - 33796415
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  33796454 tgttgttatattattataaaatgatgaatatgttgttgtt 33796415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 33796348 - 33796291
Alignment:
Q  30 gttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  33796348 gttgttatattt-tataagatgatgaatacgttgttgttatattaatataagaagatga 33796291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 1009634 - 1009589
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  1009634 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 1009589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 1926348 - 1926393
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  1926348 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 1926393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 16376599 - 16376644
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  16376599 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 16376644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 20229938 - 20229995
Alignment:
Q  31 ttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||   |||| |||||||||| |||||||||||||||||| ||||||||||    
T  20229938 ttgttatattttcataagatgatgaatacgttgttgttatattaatataagaagatga 20229995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 20925362 - 20925407
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  20925362 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 20925407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 52634720 - 52634675
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  52634720 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 52634675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 12271082 - 12271042
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  12271082 ttatattattataagatgatgaatatgttgttgttatatta 12271042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 21406597 - 21406553
Alignment:
Q  44 ataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||    
T  21406597 ataagatgatgaatacgttgttgttatattaatataagaagatga 21406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 33796382 - 33796338
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||    
T  33796382 tgttgttatattattataaaatgataaatatgtcgttgttatatt 33796338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 41306223 - 41306283
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  41306223 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 41306283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 41801080 - 41801124
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||    
T  41801080 tgttgttatatttttataagatgatgaatatgttgttgttatatt 41801124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 20315668 - 20315609
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  20315668 tgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 20315609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 20315855 - 20315797
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||| || |||| |||||    
T  20315855 tgttgttatattattataagatgatgaatatg-tgttgttatattattataagatgatga 20315797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 22131793 - 22131832
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  22131793 tgttgttatattattataaaatgatgaatatattgttgtt 22131832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 33796501 - 33796442
Alignment:
Q  16 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||| |||||| |||||||  ||||| |||||| |||||||||||||||||||    
T  33796501 tggtgttagtatgtgttgattatatttttataagatgatgtatatgttgttgttatatta 33796442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 35982360 - 35982399
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  35982360 tgttgttatattattataagatgatgaatatgttgttgtt 35982399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 20315792 - 20315746
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||  || | ||||||||||||||||||||||||||    
T  20315792 gtgttgttatattacgatgatatgatgaatatgttgttgttatatta 20315746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 20315824 - 20315779
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||    
T  20315824 gtgttgttatattattataagatgatgaatatg-tgttgttatatta 20315779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 21740400 - 21740446
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||  || | ||||||||||||||||||||||||||    
T  21740400 gtgttgttatattatgatgagatgatgaatatgttgttgttatatta 21740446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 41306257 - 41306301
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||    
T  41306257 tgttgttatattattataagatgatgaatatg-tgttgttatatta 41306301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 20230002 - 20230034
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgt 61  Q
    ||||||||||||| |||||||||||||||||||    
T  20230002 tgttgttatattattataaaatgatgaatatgt 20230034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 21740341 - 21740381
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||| ||| | ||||||||||||||||||||||||||    
T  21740341 ttatattattatgagatgatgaatatgttgttgttatatta 21740381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 21740465 - 21740525
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||| ||||||||||||||| || |||| |||||    
T  21740465 gtgttgttatattatgatgagatgatgaatacgttgttgttatattattataagatgatga 21740525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 39244909 - 39244945
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  39244909 tgttgttatattattataaagtgatgaatatgttgtt 39244945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 39248464 - 39248500
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  39248464 tgttgttatattattataaagtgatgaatatgttgtt 39248500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 41389357 - 41389393
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  41389357 tgttgttatattattataaagtgatgaatatgttgtt 41389393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 11477 - 11402
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  11477 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 11402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 11428 - 11383
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  11428 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 11383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 22111011 - 22110936
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  22111011 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22110936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 43250771 - 43250696
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  43250771 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 43250696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 21973687 - 21973762
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| ||||||||||  ||||||||||||||||||||||||||||    
T  21973687 tttggtgttagtatgtgttgattatattttcataagatgatgaataccttgttgttatattaatacaagaagatga 21973762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 1323713 - 1323773
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || |||||||||||||||||||||||||||| || |||| |||||    
T  1323713 gtgttgttatattatgatgaaatgatgaatatgttgttgttatattattataagatgatga 1323773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 21973736 - 21973781
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  21973736 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 21973781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 21977778 - 21977843
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatac 78  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||    
T  21977778 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatac 21977843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 21977846 - 21977891
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  21977846 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 21977891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 22110962 - 22110917
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  22110962 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 22110917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 43250722 - 43250677
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  43250722 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 43250677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 20983505 - 20983564
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||| |||||||||| |||||||||| || |||| |||||    
T  20983505 tgttgttatattattataagatgaggaatatgttgatgttatattattataagatgatga 20983564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 20983541 - 20983583
Alignment:
Q  32 tgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||| ||||| |||||||||||||||| |||||||||    
T  20983541 tgttatattattataagatgatgaatatgttgtggttatatta 20983583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 21829137 - 21829195
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttata 71  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| |||||    
T  21829137 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 21829195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 1323747 - 1323791
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||    
T  1323747 tgttgttatattattataagatgatgaatatg-tgttgttatatta 1323791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 14398839 - 14398884
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||  ||||| | ||||||||||||||||||||||||    
T  14398839 tgttgttatatttttataagaagatgaatatgttgttgttatatta 14398884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 20983480 - 20983517
Alignment:
Q  37 tattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  20983480 tattattataagatgatgaatatgttgttgttatatta 20983517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 21977839 - 21977872
Alignment:
Q  55 aatatgttgttgttatattaatacaagaagatga 88  Q
    |||| |||||||||||||||||||||||||||||    
T  21977839 aatacgttgttgttatattaatacaagaagatga 21977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 30941323 - 30941368
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  30941323 tgttgttatattattatatgaagatgaatatgttgttgttatatta 30941368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 13428678 - 13428738
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||| ||||||| || |||| |||||    
T  13428678 gtgttgttatattatgatgagatgatgaatatgttgttgctatattattataagatgatga 13428738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 20046715 - 20046751
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  20046715 tgttgttatatcaatataagatgatgaatatgttgtt 20046751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 38550621 - 38550681
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||||||||   || | |||||||||||||||||||||||||| || |||| |||||    
T  38550621 gtgttgttatattttgatgagatgatgaatatgttgttgttatattattataagatgatga 38550681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 38550686 - 38550746
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||||||| |||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  38550686 gtgttgttgtattatgatgagatgatgaatatgttgttgttatattattataagatgatga 38550746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 10102954 - 10103029
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  10102954 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 10103029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 24629625 - 24629700
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  24629625 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 24629700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 27600792 - 27600717
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  27600792 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 27600717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 30346161 - 30346236
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  30346161 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 30346236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 27384544 - 27384619
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| ||||| |||||||||||||||||||||||    
T  27384544 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgtcgttatattaatacaagaagatga 27384619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 27380498 - 27380571
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagat 86  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| ||||| |||||||||||||||||||||    
T  27380498 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgtcgttatattaatacaagaagat 27380571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 31344279 - 31344221
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| |||||||||| ||| |||||||||||||||||||||||||    
T  31344279 tgttgttatattt-tataagatgatgaatacgttattgttatattaatacaagaagatga 31344221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 10103003 - 10103048
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  10103003 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 10103048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 24648315 - 24648254
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| |||||| |||||||   |||||| ||||||||||||||||||||||||    
T  24648315 tttggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttatatta 24648254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 27600743 - 27600698
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  27600743 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 27600698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 30346210 - 30346255
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  30346210 tgttgttatattaatacaagaagatgaatatgttgttgttatatta 30346255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 24629674 - 24629718
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    |||||||||||||||| || | |||||||||||||||||||||||    
T  24629674 tgttgttatattaatacaagaagatgaatatgttgttgttatatt 24629718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 31344245 - 31344202
Alignment:
Q  31 ttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||| || | ||||||||||||||||||||||||    
T  31344245 ttgttatattaatacaagaagatgaatatgttgttgttatatta 31344202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 1282344 - 1282299
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  1282344 tgttgttatattattatatgaagatgaatatgttgttgttatatta 1282299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 27384597 - 27384638
Alignment:
Q  33 gttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  27384597 gttatattaatacaagaagatgaatatgttgttgttatatta 27384638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 41532201 - 41532246
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  41532201 tgttgttatattattatatgaagatgaatatgttgttgttatatta 41532246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 20634480 - 20634512
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttg 66  Q
    |||||||| ||||||||||||||||||||||||    
T  20634480 ttatattattataaaatgatgaatatgttgttg 20634512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 28576729 - 28576693
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  28576729 tgttgttatatcaatataagatgatgaatatgttgtt 28576693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 45030404 - 45030440
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  45030404 tgttgttatatcaatataagatgatgaatatgttgtt 45030440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 4)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 8575 - 8634
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| || |||| |||||    
T  8575 tgttgttatattattataaaatgatgaatatattgttgttatattattataagatgatga 8634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 8608 - 8667
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||||    
T  8608 tgttgttatattattataagatgatgaatatgttgttgttatattattagaagatgatga 8667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 8542 - 8587
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  8542 tgttgttatattattataagatgatgaatatgttgttgttatatta 8587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 8641 - 8686
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| || || ||||||||||||||||||||||||||    
T  8641 tgttgttatattattagaagatgatgaatatgttgttgttatatta 8686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 5004 - 5079
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||| |||||| |||| ||   |||| |||||||||||||||||||||||||||||||| |||||||    
T  5004 tttggtgttagtatgtgttgattatgttttcataagatgatgaatatgttgttgttatattaatacaaaaagatga 5079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 5053 - 5098
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||    
T  5053 tgttgttatattaatacaaaaagatgaatatgttgttgttatatta 5098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 8909 - 8866
Alignment:
Q  31 ttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  8909 ttgttatattaatataaaaagatgaatatgttgttgttatatta 8866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 8944 - 8885
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  |||||||||||||||| ||| |||||||||||||| || |||||||    
T  8944 tgttgttatatttttataaaatgatgaatacgtttttgttatattaatataaaaagatga 8885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 4)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 19187 - 19128
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  19187 tgttgttatatttttataagatgatgaatacgttgttgttatattaatataagaagatga 19128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 19154 - 19109
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  19154 tgttgttatattaatataagaagatgaatatgttgttgttatatta 19109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 19291 - 19232
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| |||||||||| |||||||||| ||||||| ||||||||||    
T  19291 tgttgttatatttttataagatgatgaatacgttgttgttagattaatataagaagatga 19232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 19258 - 19213
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||    
T  19258 tgttgttagattaatataagaagatgaatatgttgttgttatatta 19213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 11120 - 11061
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  11120 tgttgttatatttttataagatgatgaatacgttgttgttatattaatataagaagatga 11061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 11087 - 11042
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  11087 tgttgttatattaatataagaagatgaatatgttgttgttatatta 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 6165 - 6239
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatg 87  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||||| |||||||||    
T  6165 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatataagaagatg 6239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 2944 - 2886
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatg 87  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| || |||| ||||    
T  2944 tgttgttatattattataaaatgatgaacatgttgttgttatattattataagatgatg 2886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 7007 - 6949
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatg 87  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| || |||| ||||    
T  7007 tgttgttatattattataaaatgatgaacatgttgttgttatattattataagatgatg 6949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 2977 - 2932
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||  |||||||||| || |||||||||||||||||    
T  2977 tgttgttatattatgataaaatgataaacatgttgttgttatatta 2932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 7040 - 6995
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||  |||||||||| || |||||||||||||||||    
T  7040 tgttgttatattatgataaaatgataaacatgttgttgttatatta 6995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 981 - 936
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  981 tgttgttatattaatataagaagatgaatatgttgttgttatatta 936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 868 - 829
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  868 tgttgttatattattataaaatgatgaatatgttgttgtt 829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 999 - 955
Alignment:
Q  44 ataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||    
T  999 ataagatgatgaatacgttgttgttatattaatataagaagatga 955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 10761 - 10806
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  10761 tgttgttatattaatataagaagatgaatatgttgttgttatatta 10806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 10742 - 10787
Alignment:
Q  43 tataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  10742 tataagatgatgaatacgttgttgttatattaatataagaagatga 10787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 79454 - 79409
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  79454 tgttgttatattaatataagaagatgaatatgttgttgttatatta 79409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 79486 - 79428
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||  ||||| ||||||||||  ||||||||||||||||| ||||||||||    
T  79486 tgttgttatattt-tataagatgatgaatacattgttgttatattaatataagaagatga 79428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 79533 - 79475
Alignment:
Q  16 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||| |||||| ||||||| || ||| |||||||||| ||||||||||||||    
T  79533 tggtgttagtatgtgttgattatatttatgtaagatgatgaatacgttgttgttatatt 79475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 62706 - 62765
Alignment:
Q  31 ttgttatattaatataaaatgatgaatatg---ttgttgttatattaatacaagaagatg 87  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||| || || ||||||    
T  62706 ttgttatattattataaaatgatgaatatgatgttgttgttatattattataacaagatg 62765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 362117 - 362057
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || |||||||||||||||||||||||||||| || |||| |||||    
T  362117 gtgttgttatattatgatgaaatgatgaatatgttgttgttatattattataagatgatga 362057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 362215 - 362169
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||    
T  362215 gtgttgttatattattatgagatgatgaatatgttgttgttatatta 362169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 362274 - 362234
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||| ||| | ||||||||||||||||||||||||||    
T  362274 ttatattattatgagatgatgaatatgttgttgttatatta 362234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 25433 - 25491
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatg 87  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||| || |||| ||||    
T  25433 tgttgttatattattatatgatgatgaatatgttgttgttatattactataagatgatg 25491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 25400 - 25445
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| || |  ||||||||||||||||||||||||||    
T  25400 tgttgttatattattacatgatgatgaatatgttgttgttatatta 25445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 68326 - 68387
Alignment:
Q  14 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| |||||| |||||||   |||| ||||||||||||||||||||||||||    
T  68326 tttggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttatatta 68387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 74072 - 74117
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||    
T  74072 tgttgttatatttctataagatgatgaatatgttgttgttatatta 74117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 21151 - 21195
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatt 73  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||    
T  21151 tgttgttatatttttataagatgatgaatatgttgttgttatatt 21195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 7023 - 6963
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  7023 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 6963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 7088 - 7028
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||| ||||| || |||| |||||    
T  7088 gtgttgttatattatgatgagatgatgaatatgttgttgttgtattattataagatgatga 7028  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 44420 - 44480
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  44420 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 44480  T

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Target: scaffold0116; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 44485 - 44545
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatattaatacaagaagatga 88  Q
    ||||||||||||||  || | |||||||||||||||||||||||||| || |||| |||||    
T  44485 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatga 44545  T

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Target: scaffold0116; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 44454 - 44498
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||||    
T  44454 tgttgttatattattataagatgatgaatatg-tgttgttatatta 44498  T

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Target: scaffold0484 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 60 - 21
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgtt 68  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  60 tgttattatattattataaaatgatgaatatgttgttgtt 21  T

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Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 37065 - 37126
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttg---ttgttatattaatacaagaagatg 87  Q
    ||||||||||||| ||||||||||||| |||||||   ||||||||||| || |||||||||    
T  37065 tgttgttatattattataaaatgatgactatgttgttattgttatattattataagaagatg 37126  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 21238 - 21283
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||    
T  21238 gtgttgttatattactataagatgatgaatatg-tgttgttatatta 21283  T

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Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 24168 - 24213
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||    
T  24168 gtgttgttatattactataagatgatgaatatg-tgttgttatatta 24213  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 33914 - 33959
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  33914 tgttgttatattattatatgaagatgaatatgttgttgttatatta 33959  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 15333 - 15378
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgttgttatatta 74  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||||    
T  15333 tgttgttatattattatatgaagatgaatatgttgttgttatatta 15378  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 8527 - 8588
Alignment:
Q  28 gtgttgttatattaatataaaatgatgaatatgttgttg-ttatattaatacaagaagatga 88  Q
    |||||||||||||| ||||| ||||||| |||||||||| |||||||| || |||| |||||    
T  8527 gtgttgttatattattataagatgatgattatgttgttgtttatattattataagatgatga 8588  T

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Target: scaffold0674 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 3060 - 3028
Alignment:
Q  34 ttatattaatataaaatgatgaatatgttgttg 66  Q
    |||||||| ||||||||||||||||||||||||    
T  3060 ttatattattataaaatgatgaatatgttgttg 3028  T

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Target: scaffold0142 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 8514 - 8550
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  8514 tgttgttatattattataaaatgatgagtatgttgtt 8550  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 116036 - 116000
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  116036 tgttgttatatcaatataagatgatgaatatgttgtt 116000  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 71545 - 71509
Alignment:
Q  29 tgttgttatattaatataaaatgatgaatatgttgtt 65  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  71545 tgttgttatatcaatataagatgatgaatatgttgtt 71509  T

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