View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7943_low_8 (Length: 541)

Name: NF7943_low_8
Description: NF7943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7943_low_8
NF7943_low_8
[»] chr3 (23 HSPs)
chr3 (1-466)||(36086066-36086531)
chr3 (467-513)||(14888060-14888106)
chr3 (466-513)||(4313614-4313661)
chr3 (466-513)||(14881334-14881381)
chr3 (467-513)||(261364-261410)
chr3 (467-513)||(13111806-13111852)
chr3 (467-513)||(14893165-14893211)
chr3 (467-513)||(16031278-16031324)
chr3 (467-513)||(21638580-21638626)
chr3 (467-514)||(11180760-11180807)
chr3 (466-513)||(13105658-13105705)
chr3 (468-514)||(12550412-12550458)
chr3 (467-513)||(23288141-23288187)
chr3 (467-513)||(48060749-48060795)
chr3 (467-511)||(3404752-3404796)
chr3 (466-513)||(74237-74284)
chr3 (467-513)||(68145-68191)
chr3 (467-513)||(49967354-49967400)
chr3 (466-514)||(8612621-8612669)
chr3 (467-511)||(13086554-13086598)
chr3 (466-498)||(15923318-15923350)
chr3 (467-511)||(16417489-16417533)
chr3 (469-513)||(37470141-37470185)
[»] chr6 (17 HSPs)
chr6 (466-513)||(20452677-20452724)
chr6 (465-513)||(18961016-18961064)
chr6 (466-514)||(19719835-19719883)
chr6 (467-514)||(17784089-17784136)
chr6 (467-514)||(19713680-19713727)
chr6 (467-513)||(12667557-12667603)
chr6 (467-513)||(26896467-26896513)
chr6 (467-513)||(28702907-28702953)
chr6 (467-513)||(20459478-20459524)
chr6 (466-514)||(19898949-19898997)
chr6 (475-514)||(14176931-14176970)
chr6 (467-513)||(22779159-22779205)
chr6 (465-506)||(19169104-19169145)
chr6 (465-513)||(10985094-10985142)
chr6 (467-499)||(21961607-21961639)
chr6 (465-493)||(22631692-22631720)
chr6 (466-506)||(24143592-24143632)
[»] chr1 (12 HSPs)
chr1 (186-256)||(11326794-11326864)
chr1 (186-256)||(11484815-11484885)
chr1 (466-513)||(2336076-2336123)
chr1 (466-513)||(19367474-19367521)
chr1 (467-514)||(22116369-22116416)
chr1 (467-513)||(35070035-35070081)
chr1 (466-507)||(1961637-1961678)
chr1 (467-510)||(13185783-13185826)
chr1 (467-510)||(16884518-16884561)
chr1 (467-513)||(18098375-18098421)
chr1 (467-513)||(20429353-20429399)
chr1 (467-513)||(44832575-44832621)
[»] chr5 (14 HSPs)
chr5 (466-514)||(20639881-20639929)
chr5 (466-514)||(25526187-25526235)
chr5 (466-513)||(20092772-20092819)
chr5 (466-513)||(36454626-36454673)
chr5 (467-513)||(15957001-15957047)
chr5 (467-513)||(36448249-36448295)
chr5 (469-514)||(26186667-26186712)
chr5 (466-514)||(25532867-25532915)
chr5 (467-513)||(20099669-20099715)
chr5 (467-513)||(23378320-23378366)
chr5 (467-513)||(40014876-40014922)
chr5 (466-511)||(25677884-25677929)
chr5 (465-506)||(26553292-26553333)
chr5 (466-506)||(21696071-21696111)
[»] chr4 (11 HSPs)
chr4 (466-514)||(3382463-3382511)
chr4 (467-514)||(3389211-3389258)
chr4 (467-514)||(39745439-39745486)
chr4 (467-513)||(19738028-19738074)
chr4 (467-513)||(20548381-20548427)
chr4 (467-513)||(20555005-20555051)
chr4 (467-513)||(50187783-50187829)
chr4 (9-53)||(48392994-48393038)
chr4 (467-513)||(22175857-22175903)
chr4 (465-506)||(13100668-13100709)
chr4 (467-511)||(10220457-10220501)
[»] scaffold0150 (1 HSPs)
scaffold0150 (467-514)||(38617-38664)
[»] scaffold0050 (1 HSPs)
scaffold0050 (467-514)||(27734-27781)
[»] chr7 (11 HSPs)
chr7 (467-514)||(1858585-1858632)
chr7 (466-513)||(34132841-34132888)
chr7 (467-513)||(34139153-34139199)
chr7 (469-513)||(43906101-43906145)
chr7 (467-514)||(18779083-18779130)
chr7 (464-514)||(13270905-13270955)
chr7 (467-513)||(22346867-22346913)
chr7 (457-506)||(9460435-9460484)
chr7 (466-506)||(9474234-9474274)
chr7 (467-514)||(28415150-28415197)
chr7 (466-506)||(42631285-42631325)
[»] chr2 (12 HSPs)
chr2 (467-514)||(5874270-5874317)
chr2 (467-514)||(36735333-36735380)
chr2 (467-514)||(38084486-38084533)
chr2 (467-513)||(20279351-20279397)
chr2 (466-513)||(18500225-18500272)
chr2 (467-513)||(18308-18354)
chr2 (467-513)||(11873682-11873728)
chr2 (466-514)||(5871129-5871177)
chr2 (466-506)||(12374553-12374593)
chr2 (466-506)||(12388380-12388420)
chr2 (467-511)||(25036877-25036921)
chr2 (467-511)||(25040984-25041028)
[»] scaffold0290 (1 HSPs)
scaffold0290 (467-513)||(22046-22092)
[»] scaffold0167 (1 HSPs)
scaffold0167 (467-513)||(7980-8026)
[»] scaffold0027 (1 HSPs)
scaffold0027 (467-513)||(23583-23629)
[»] scaffold0001 (1 HSPs)
scaffold0001 (467-513)||(96782-96828)
[»] chr8 (8 HSPs)
chr8 (467-513)||(14891881-14891927)
chr8 (467-514)||(25859293-25859340)
chr8 (467-514)||(32025672-32025719)
chr8 (467-513)||(15061355-15061401)
chr8 (467-513)||(22163006-22163052)
chr8 (466-513)||(20733159-20733206)
chr8 (466-513)||(22156997-22157044)
chr8 (467-511)||(24487937-24487981)
[»] scaffold0029 (1 HSPs)
scaffold0029 (465-513)||(38092-38140)
[»] scaffold0253 (2 HSPs)
scaffold0253 (467-514)||(10339-10386)
scaffold0253 (467-514)||(19764-19811)
[»] scaffold0046 (1 HSPs)
scaffold0046 (467-514)||(86715-86762)
[»] scaffold1922 (1 HSPs)
scaffold1922 (467-513)||(235-281)
[»] scaffold0473 (1 HSPs)
scaffold0473 (467-513)||(9182-9228)
[»] scaffold0320 (1 HSPs)
scaffold0320 (467-513)||(6340-6386)
[»] scaffold0085 (1 HSPs)
scaffold0085 (467-513)||(7818-7864)
[»] scaffold0028 (1 HSPs)
scaffold0028 (467-513)||(65838-65884)
[»] scaffold0016 (1 HSPs)
scaffold0016 (467-513)||(14099-14145)
[»] scaffold0039 (1 HSPs)
scaffold0039 (469-513)||(89893-89937)
[»] scaffold0328 (1 HSPs)
scaffold0328 (467-514)||(195-242)
[»] scaffold0630 (1 HSPs)
scaffold0630 (476-514)||(1396-1434)
[»] scaffold0351 (1 HSPs)
scaffold0351 (467-513)||(7660-7706)
[»] scaffold0306 (1 HSPs)
scaffold0306 (467-513)||(15644-15690)
[»] scaffold0435 (1 HSPs)
scaffold0435 (466-511)||(8394-8439)
[»] scaffold0755 (1 HSPs)
scaffold0755 (466-506)||(962-1002)
[»] scaffold0505 (1 HSPs)
scaffold0505 (467-511)||(11470-11514)
[»] scaffold0441 (1 HSPs)
scaffold0441 (467-511)||(2471-2515)
[»] scaffold0269 (1 HSPs)
scaffold0269 (465-493)||(14677-14705)
[»] scaffold0094 (1 HSPs)
scaffold0094 (466-510)||(30722-30766)
[»] scaffold0068 (1 HSPs)
scaffold0068 (466-506)||(17799-17839)
[»] scaffold0023 (1 HSPs)
scaffold0023 (467-511)||(150645-150689)


Alignment Details
Target: chr3 (Bit Score: 462; Significance: 0; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 1 - 466
Target Start/End: Original strand, 36086066 - 36086531
Alignment:
Q  1 cagaatgttccttagaagtaagaagaatctaaacatcgccaggagcagcatctccagctaccttagtcttcaaattttcctaaactttcttccatagcga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36086066 cagaatgttccttagaagtaagaagaatctaaacatcgccaggagcagcatctccagctaccttagtcttcaaattttcctaaactttcttccatagcga 36086165  T
Q  101 cttgagattggctgaagcaactttctcttcttcgagaggtttgaaagcatccacgagtataaccaagtgttgtgctcagatccataccttccttctttta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36086166 cttgagattggctgaagcaactttctcttcttcgagaggtttgaaagcatccacgagtataaccaagtgttgtgctcagatccataccttccttctttta 36086265  T
Q  201 tctcttgattccactgcttggtcatatctatacctcagattcatgagagcaatgtcaaagtaacacataaactcataataaattaccaatgcacatacta 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36086266 tctcttgattccactgcttggtcatatctatacctcagattcatgagagcaatgtcaaagtaacacataaactcataataaattaccaatgcacatacta 36086365  T
Q  301 taaaatgttaacaatcaacacatgtcaacaaacgaaacttcagcaccaccaattctttttccaacatcttgaatcagatataaaaatgaagcaaaaataa 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36086366 taaaatgttaacaatcaacacatgtcaacaaacgaaacttcagcaccaccaattctttttccaacatcttgaatcagatataaaaatgaagcaaaaataa 36086465  T
Q  401 atcaatttagtaatcatcaaataagatgcggtcacagccataaaaccttggcaatgagttcctgac 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36086466 atcaatttagtaatcatcaaataagatgcggtcacagccataaaaccttggcaatgagttcttgac 36086531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 14888106 - 14888060
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  14888106 tgtcataccccaatttttgacctaaggctccactgacacatgtcact 14888060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 4313661 - 4313614
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  4313661 ctgtcataccccaatttttgacctaaggccccactgacacatgtcact 4313614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 14881381 - 14881334
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  14881381 ctgtcataccccaatttttgacctaaggccccaccgacacatgtcact 14881334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 261364 - 261410
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  261364 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 261410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 13111852 - 13111806
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  13111852 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 13111806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 14893211 - 14893165
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  14893211 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 14893165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 16031324 - 16031278
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  16031324 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 16031278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 21638626 - 21638580
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  21638626 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 21638580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 514
Target Start/End: Original strand, 11180760 - 11180807
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  11180760 tgtcataccccaatttttaacctaaggccccactgacacatgtcactc 11180807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 13105705 - 13105658
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||||    
T  13105705 ctgtcataccctaatttttgacctaaggccccactgacacatgtcact 13105658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 514
Target Start/End: Original strand, 12550412 - 12550458
Alignment:
Q  468 gtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||    
T  12550412 gtcataccccaatttttgacctaaggccccagtgacacatgtcactc 12550458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 23288187 - 23288141
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  23288187 tgtcataccccaatttttgacctaaggccccacttacacatgtcact 23288141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 48060795 - 48060749
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||    
T  48060795 tgtcataccccaatttttgacctaaggcctcactgacacatgtcact 48060749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 3404752 - 3404796
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||    
T  3404752 tgtcataccccaattttttacctaaggccccactgacacatgtca 3404796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 513
Target Start/End: Original strand, 74237 - 74284
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||| || |||| | |||||||||||    
T  74237 ctgtcataccccaatttttgacctaacgccccactggcacatgtcact 74284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 68145 - 68191
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||| || |||| | |||||||||||    
T  68145 tgtcataccccaatttttgacctaacgccccactggcacatgtcact 68191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 49967354 - 49967400
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||| ||||||||||||||||| |||| ||||| |||||||    
T  49967354 tgtcataccctaatttttgacctaaggccccactgacacgtgtcact 49967400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 514
Target Start/End: Original strand, 8612621 - 8612669
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||   |||| || |||||||||||    
T  8612621 ctgtcataccccaatttttgacctaagagcccactgagacatgtcactc 8612669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 13086554 - 13086598
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    |||||||||||||||||||||||||||  ||||  ||||||||||    
T  13086554 tgtcataccccaatttttgacctaaggtcccactaacacatgtca 13086598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 498
Target Start/End: Original strand, 15923318 - 15923350
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctcca 498  Q
    |||||||||||||||||||||||||||| ||||    
T  15923318 ctgtcataccccaatttttgacctaaggatcca 15923350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 16417533 - 16417489
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    |||||||||||||||||||||||||| |  ||| |||||||||||    
T  16417533 tgtcataccccaatttttgacctaagacagcaccgacacatgtca 16417489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 513
Target Start/End: Original strand, 37470141 - 37470185
Alignment:
Q  469 tcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||| ||||  |||| |||||||    
T  37470141 tcataccccaatttttgacctaaggccccactaacacgtgtcact 37470185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 8e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 20452724 - 20452677
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  20452724 ctgtcataccccaatttttgacctaaggctccactgacacatgtcact 20452677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 465 - 513
Target Start/End: Complemental strand, 18961064 - 18961016
Alignment:
Q  465 actgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  18961064 actgtcataccccaatttttgacctaaggccccactgacacatgtcact 18961016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 466 - 514
Target Start/End: Original strand, 19719835 - 19719883
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  19719835 ctgtcataccccaatttttgacctaaggccccactgacacatgtcactc 19719883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 17784136 - 17784089
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  17784136 tgtcatacaccaatttttgacctaaggctccactgacacatgtcactc 17784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Original strand, 19713680 - 19713727
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  19713680 tgtcataccccaatttttgacctaaggccccactgacacatgtcactc 19713727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 12667603 - 12667557
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  12667603 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 12667557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 26896467 - 26896513
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  26896467 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 26896513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 28702953 - 28702907
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  28702953 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 28702907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 20459524 - 20459478
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||    
T  20459524 tgtcataccccaatttttgacctaaggccccagtgacacatgtcact 20459478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 514
Target Start/End: Original strand, 19898949 - 19898997
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||| ||||||||||||||||| |||| | ||||||||||||    
T  19898949 ctgtcatacccaaatttttgacctaaggccccactggcacatgtcactc 19898997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 514
Target Start/End: Original strand, 14176931 - 14176970
Alignment:
Q  475 cccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  14176931 cccaatttttgacctaaggccccactgacacatgtcactc 14176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 22779205 - 22779159
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||| || |||| ||||| |||||||    
T  22779205 tgtcataccccaatttttgacctaatgccccactgacacgtgtcact 22779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 506
Target Start/End: Original strand, 19169104 - 19169145
Alignment:
Q  465 actgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    |||||||||||||||||||||||||||||  |||| ||||||    
T  19169104 actgtcataccccaatttttgacctaaggtcccactgacaca 19169145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 513
Target Start/End: Complemental strand, 10985142 - 10985094
Alignment:
Q  465 actgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||| |||||||||||||||||||||| | ||||  ||||||||||||    
T  10985142 actgtaataccccaatttttgacctaagaccccactaacacatgtcact 10985094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 499
Target Start/End: Original strand, 21961607 - 21961639
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccac 499  Q
    ||||||||||||||||||||||||||| |||||    
T  21961607 tgtcataccccaatttttgacctaaggttccac 21961639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 493
Target Start/End: Original strand, 22631692 - 22631720
Alignment:
Q  465 actgtcataccccaatttttgacctaagg 493  Q
    |||||||||||||||||||||||||||||    
T  22631692 actgtcataccccaatttttgacctaagg 22631720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 506
Target Start/End: Complemental strand, 24143632 - 24143592
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  24143632 ctgtcataccccaatttttgacctaaggtcccactgacaca 24143592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 11326794 - 11326864
Alignment:
Q  186 accttccttcttttatctcttgattccactgcttggtcatatctatacctcagattcatgagagcaatgtc 256  Q
    |||||||| | |||||||||||||||||||||  | ||||||||||||||| |||||||||||| ||||||    
T  11326794 accttcctgcctttatctcttgattccactgcaagatcatatctatacctctgattcatgagagaaatgtc 11326864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 11484815 - 11484885
Alignment:
Q  186 accttccttcttttatctcttgattccactgcttggtcatatctatacctcagattcatgagagcaatgtc 256  Q
    |||||||| | |||||||||||||||||||||  | ||||||||||||||| |||||||||||| ||||||    
T  11484815 accttcctgcctttatctcttgattccactgcaagatcatatctatacctctgattcatgagagaaatgtc 11484885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 2336123 - 2336076
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  2336123 ctgtcataccccaatttttgacctaaggccccactgacacatgtcact 2336076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 513
Target Start/End: Original strand, 19367474 - 19367521
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  19367474 ctgtcataccccaatttttgacctaaggccccactgacacatgtcact 19367521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 22116416 - 22116369
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  22116416 tgtcataccccaatttttgacctaaggccccactgacacatgtcactc 22116369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 35070035 - 35070081
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  35070035 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 35070081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 507
Target Start/End: Original strand, 1961637 - 1961678
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacat 507  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  1961637 ctgtcataccccaatttttgacctaaggccccactgacacat 1961678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 510
Target Start/End: Original strand, 13185783 - 13185826
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtc 510  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||    
T  13185783 tgtcatactccaatttttgacctaaggttccaccgacacatgtc 13185826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 510
Target Start/End: Original strand, 16884518 - 16884561
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtc 510  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||    
T  16884518 tgtcataccccaatttttgacctaaggccccactgacacgtgtc 16884561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 18098375 - 18098421
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||| ||||||||| ||||  ||||||||||||    
T  18098375 tgtcataccccaatttttaacctaaggccccactaacacatgtcact 18098421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 20429353 - 20429399
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||  |||| ||||| |||||||    
T  20429353 tgtcataccccaatttttgacctaaggtcccactgacacttgtcact 20429399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 44832621 - 44832575
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||| |||||||||| |||||||||| ||| |||||||||||||    
T  44832621 tgtcatatcccaatttttaacctaaggcttcactgacacatgtcact 44832575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 466 - 514
Target Start/End: Complemental strand, 20639929 - 20639881
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  20639929 ctgtcataccccaatttttgacctaaggccccactgacacatgtcactc 20639881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 466 - 514
Target Start/End: Original strand, 25526187 - 25526235
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  25526187 ctgtcataccccaatttttgacctaaggccccactgacacatgtcactc 25526235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 20092819 - 20092772
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  20092819 ctgtcataccccaatttttgacctaaggccccactgacacatgtcact 20092772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 513
Target Start/End: Original strand, 36454626 - 36454673
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||    
T  36454626 ctgtcataccccaatttttgacctaaggcctcacggacacatgtcact 36454673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 15957047 - 15957001
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  15957047 tgtcataccccaatttttgacctaaggttccactgacacatgtcact 15957001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 36448249 - 36448295
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  36448249 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 36448295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 469 - 514
Target Start/End: Complemental strand, 26186712 - 26186667
Alignment:
Q  469 tcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||    
T  26186712 tcataccccaatttttgacctaaggccccactgacacatgtcactc 26186667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 514
Target Start/End: Original strand, 25532867 - 25532915
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  25532867 ctgtcatatcccaatttttgacctaaggccccactgacacatgtcactc 25532915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 20099715 - 20099669
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  20099715 tgtcataccccaatttttgacctaaggccccactaacacatgtcact 20099669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 23378366 - 23378320
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||    
T  23378366 tgtcatacctcaatttttgacctaaggccccactgacacatgtcact 23378320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 40014876 - 40014922
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||    
T  40014876 tgtcataccccaatttttgacttaaggtcccactgacacatgtcact 40014922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 511
Target Start/End: Complemental strand, 25677929 - 25677884
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    ||||||||||||||||||||||||||||   ||| |||||||||||    
T  25677929 ctgtcataccccaatttttgacctaaggtcacaccgacacatgtca 25677884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 506
Target Start/End: Complemental strand, 26553333 - 26553292
Alignment:
Q  465 actgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    |||||||||||||||||||||||||||||  |||| ||||||    
T  26553333 actgtcataccccaatttttgacctaaggtcccactgacaca 26553292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 21696071 - 21696111
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  21696071 ctgtcataccccaatttttgacctaaggtcccactgacaca 21696111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 466 - 514
Target Start/End: Complemental strand, 3382511 - 3382463
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  3382511 ctgtcataccccaatttttgacctaaggccccactgacacatgtcactc 3382463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 3389258 - 3389211
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  3389258 tgtcataccccaatttttgacctaaggccccactgacacatgtcactc 3389211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 39745486 - 39745439
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  39745486 tgtcataccccaatttttgacctaaggccccactgacacatgtcactc 39745439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 19738074 - 19738028
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  19738074 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 19738028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 20548381 - 20548427
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  20548381 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 20548427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 20555005 - 20555051
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  20555005 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 20555051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 50187783 - 50187829
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  50187783 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 50187829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 48393038 - 48392994
Alignment:
Q  9 tccttagaagtaagaagaatctaaacatcgccaggagcagcatct 53  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  48393038 tccttagaagtaagaagaatctgaacatcaccaggagcagcatct 48392994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 22175903 - 22175857
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| ||||| |||||||    
T  22175903 tgtcataccccaatttttgacctaaggccccactgacacgtgtcact 22175857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 506
Target Start/End: Original strand, 13100668 - 13100709
Alignment:
Q  465 actgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    ||||||||||||||| |||||||||||||| |||| ||||||    
T  13100668 actgtcataccccaaattttgacctaaggccccactgacaca 13100709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 10220501 - 10220457
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    ||||||||||||||||||||||||||||  ||| ||||| |||||    
T  10220501 tgtcataccccaatttttgacctaaggcagcactgacacgtgtca 10220457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 38664 - 38617
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  38664 tgtcataccccaatttttgacctaaggccccactgacacatgtcactc 38617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 27781 - 27734
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  27781 tgtcataccccaatttttgacctaaggccccactgacacatgtcactc 27734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 1858632 - 1858585
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  1858632 tgtcataccccaatttttgacctaaggccccactgacacatgtcactc 1858585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 34132888 - 34132841
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  34132888 ctgtcataccccaatttttgacctaaggccccactgacacatgtcact 34132841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 34139199 - 34139153
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  34139199 tgtcataccccaatttttgatctaaggctccactgacacatgtcact 34139153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 469 - 513
Target Start/End: Original strand, 43906101 - 43906145
Alignment:
Q  469 tcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  43906101 tcataccccaatttttgacctaaggccccactgacacatgtcact 43906145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 18779130 - 18779083
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||    
T  18779130 tgtcataccccaatttttgacctaaggccccgctgacacatgtcactc 18779083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 514
Target Start/End: Complemental strand, 13270955 - 13270905
Alignment:
Q  464 gactgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||  ||||||||||||||||||| |||| ||||||||||||||    
T  13270955 gactgtcatattccaatttttgacctaaggccccactgacacatgtcactc 13270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 22346867 - 22346913
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||    
T  22346867 tgtcataccccaatttttgtcctaaggccccactgacacatgtcact 22346913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 457 - 506
Target Start/End: Original strand, 9460435 - 9460484
Alignment:
Q  457 agttcctgactgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||| ||||||    
T  9460435 agttcatgattgtcataccccaaattttgacctaaggctccactgacaca 9460484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 9474234 - 9474274
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  9474234 ctgtcataccccaaattttgacctaaggctccactgacaca 9474274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 514
Target Start/End: Original strand, 28415150 - 28415197
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||| ||||||||| || | ||||||||||||||    
T  28415150 tgtcataccccaattttttacctaaggccccgctgacacatgtcactc 28415197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 506
Target Start/End: Complemental strand, 42631325 - 42631285
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  42631325 ctgtcataccccaatttttgacctaaggtcccactgacaca 42631285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 5874317 - 5874270
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  5874317 tgtcataccccaatttttgacctaagggtccactgacacatgtcactc 5874270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Original strand, 36735333 - 36735380
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  36735333 tgtcataccccaatttttgacctaaggccccactgacacatgtcactc 36735380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 38084533 - 38084486
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  38084533 tgtcataccccaatttttgacctaaggccccactgacacatgtcactc 38084486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 20279397 - 20279351
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  20279397 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 20279351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 466 - 513
Target Start/End: Original strand, 18500225 - 18500272
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  18500225 ctgtcataccccaatttttgatctaaggccccactgacacatgtcact 18500272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 18354 - 18308
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||    
T  18354 tgtcataccccaatttttgacctaaggccccactgagacatgtcact 18308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 11873682 - 11873728
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||| | |||| |||||||||||||    
T  11873682 tgtcataccccaatttttgacctaagaccccactgacacatgtcact 11873728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 514
Target Start/End: Complemental strand, 5871177 - 5871129
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||||||||||||||||||||  |||| ||||||| ||||||    
T  5871177 ctgtcataccccaatttttgacctaagggcccactgacacatatcactc 5871129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 12374553 - 12374593
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    |||||||||||||| ||||||||||||| ||||| ||||||    
T  12374553 ctgtcataccccaaattttgacctaaggttccactgacaca 12374593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 12388380 - 12388420
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    |||||||||||||| ||||||||||||| ||||| ||||||    
T  12388380 ctgtcataccccaaattttgacctaaggttccactgacaca 12388420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 25036921 - 25036877
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    |||||||||||||||||||||||||||   ||| |||||||||||    
T  25036921 tgtcataccccaatttttgacctaaggtcacaccgacacatgtca 25036877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 25041028 - 25040984
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    |||||||||||||||||||||||||||   ||| |||||||||||    
T  25041028 tgtcataccccaatttttgacctaaggtcacaccgacacatgtca 25040984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 22046 - 22092
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  22046 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 22092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 7980 - 8026
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  7980 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 8026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 23583 - 23629
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  23583 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 23629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 96782 - 96828
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  96782 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 96828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 14891927 - 14891881
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  14891927 tgtcataccccaatttttgacctaaggccccactgacacatgtcact 14891881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 25859340 - 25859293
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| |||| | ||||||||||||    
T  25859340 tgtcataccccaatttttgacctaaggccccactgtcacatgtcactc 25859293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 32025719 - 32025672
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||||    
T  32025719 tgtcataccccaatttttgacctaagaccccactgacacatgtcactc 32025672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 15061401 - 15061355
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| |||| ||||| |||||||    
T  15061401 tgtcataccccaatttttgacctaaggccccactgacacgtgtcact 15061355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 22163052 - 22163006
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||    
T  22163052 tgtcataccccaatttttgacctaagggcccactgacacatgtcact 22163006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 513
Target Start/End: Original strand, 20733159 - 20733206
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||| |||  ||||| |||||||    
T  20733159 ctgtcataccccaatttttgacctaaggccccattgacacgtgtcact 20733206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 22157044 - 22156997
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||||    
T  22157044 ctgtcataccccaatttttgacctaagggcccactaacacatgtcact 22156997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 24487981 - 24487937
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||    
T  24487981 tgtcataccccaatttttgacctaaggtcccactgacgcatgtca 24487937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 465 - 513
Target Start/End: Complemental strand, 38140 - 38092
Alignment:
Q  465 actgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  38140 actgtcataccccaatttttgacctaaggccccactgacacgtgtcact 38092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 514
Target Start/End: Original strand, 10339 - 10386
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||    
T  10339 tgtcataccccaatttttgacctaaggccccgctgacacatgtcactc 10386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 514
Target Start/End: Original strand, 19764 - 19811
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||    
T  19764 tgtcataccccaatttttgacctaaggccccgctgacacatgtcactc 19811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 86762 - 86715
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  86762 tgtcataccctaatttttgacctaaggccccactgacacatgtcactc 86715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1922 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1922
Description:

Target: scaffold1922; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 281 - 235
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||| || |||| |||||||||||||    
T  281 tgtcataccccaatttttgacctaatgccccactgacacatgtcact 235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 9228 - 9182
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||    
T  9228 tgtcataccccaatttttgacctaaggcctcactgacacatgtcact 9182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 6386 - 6340
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||    
T  6386 tgtcataccccaatttttgtcctaaggccccactgacacatgtcact 6340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 7864 - 7818
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  7864 tgtcataccccaatttttgacctaaggccccactaacacatgtcact 7818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 65838 - 65884
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  65838 tgtcataccccaatttttgacctaaggccccactcacacatgtcact 65884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 14099 - 14145
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||    
T  14099 tgtcatacctcaatttttgacctaaggccccactgacacatgtcact 14145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 469 - 513
Target Start/End: Complemental strand, 89937 - 89893
Alignment:
Q  469 tcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||    
T  89937 tcataccccaatttttgacctaaggccccactgacatatgtcact 89893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 242 - 195
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||||||||||||||||||||  ||| ||||| ||||||||    
T  242 tgtcataccccaatttttgacctaaggcctcactgacacttgtcactc 195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 514
Target Start/End: Complemental strand, 1434 - 1396
Alignment:
Q  476 ccaatttttgacctaaggctccacggacacatgtcactc 514  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  1434 ccaatttttgacctaaggccccactgacacatgtcactc 1396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 7706 - 7660
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||| ||||||||||||||||| |||| ||||| |||||||    
T  7706 tgtcataccctaatttttgacctaaggccccactgacacttgtcact 7660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 15644 - 15690
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtcact 513  Q
    |||||||||||||||||||  ||||||| |||| |||||||||||||    
T  15644 tgtcataccccaatttttgttctaaggccccactgacacatgtcact 15690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 511
Target Start/End: Complemental strand, 8439 - 8394
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    ||||||||||||||||||||||||||||   ||| |||||||||||    
T  8439 ctgtcataccccaatttttgacctaaggtcacaccgacacatgtca 8394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0755 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 962 - 1002
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    |||||||||||||| |||||||||||||| |||| ||||||    
T  962 ctgtcataccccaaattttgacctaaggccccactgacaca 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 11470 - 11514
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    |||||||||||||||||||||||||||  ||||  ||||||||||    
T  11470 tgtcataccccaatttttgacctaaggacccactaacacatgtca 11514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 2471 - 2515
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||    
T  2471 tgtcataccccaatttttgacctaaggtcccactgacgcatgtca 2515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 493
Target Start/End: Complemental strand, 14705 - 14677
Alignment:
Q  465 actgtcataccccaatttttgacctaagg 493  Q
    |||||||||||||||||||||||||||||    
T  14705 actgtcataccccaatttttgacctaagg 14677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 510
Target Start/End: Complemental strand, 30766 - 30722
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacacatgtc 510  Q
    ||||||||||||||||||||||||||||  |||| ||||| ||||    
T  30766 ctgtcataccccaatttttgacctaaggtcccactgacacgtgtc 30722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 506
Target Start/End: Complemental strand, 17839 - 17799
Alignment:
Q  466 ctgtcataccccaatttttgacctaaggctccacggacaca 506  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  17839 ctgtcataccccaatttttgacctaaggtcccactgacaca 17799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 150689 - 150645
Alignment:
Q  467 tgtcataccccaatttttgacctaaggctccacggacacatgtca 511  Q
    |||||||||||||||||||||||||| |  ||| |||||||||||    
T  150689 tgtcataccccaatttttgacctaagacaacactgacacatgtca 150645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University