View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7945_low_4 (Length: 242)

Name: NF7945_low_4
Description: NF7945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7945_low_4
NF7945_low_4
[»] chr3 (40 HSPs)
chr3 (1-242)||(54685107-54685348)
chr3 (1-242)||(33342089-33342330)
chr3 (1-242)||(38168122-38168369)
chr3 (1-242)||(30153150-30153396)
chr3 (1-227)||(53771249-53771474)
chr3 (1-227)||(16261661-16261886)
chr3 (1-189)||(28558379-28558567)
chr3 (1-190)||(23492581-23492770)
chr3 (1-147)||(7854190-7854336)
chr3 (1-147)||(17955885-17956031)
chr3 (1-147)||(55513078-55513224)
chr3 (1-138)||(45581839-45581976)
chr3 (1-147)||(3992758-3992904)
chr3 (1-147)||(54038025-54038171)
chr3 (1-147)||(2844399-2844545)
chr3 (116-242)||(13839200-13839326)
chr3 (116-242)||(2050115-2050246)
chr3 (116-242)||(12029973-12030105)
chr3 (116-242)||(19260650-19260781)
chr3 (1-103)||(18970129-18970231)
chr3 (116-217)||(17912330-17912430)
chr3 (149-242)||(5240530-5240628)
chr3 (116-227)||(11986003-11986112)
chr3 (116-190)||(2449110-2449184)
chr3 (116-227)||(13954728-13954836)
chr3 (116-227)||(45861122-45861230)
chr3 (114-239)||(51960938-51961065)
chr3 (116-190)||(15615137-15615211)
chr3 (1-71)||(48421785-48421855)
chr3 (116-192)||(14285289-14285365)
chr3 (1-71)||(15550806-15550876)
chr3 (116-190)||(14842445-14842519)
chr3 (116-190)||(19947026-19947100)
chr3 (116-190)||(8268608-8268682)
chr3 (116-190)||(8275708-8275782)
chr3 (116-190)||(18896919-18896993)
chr3 (116-189)||(12264668-12264741)
chr3 (128-192)||(11477051-11477115)
chr3 (116-192)||(16933825-16933901)
chr3 (170-235)||(19570497-19570564)
[»] scaffold0465 (1 HSPs)
scaffold0465 (1-242)||(9788-10030)
[»] scaffold0597 (1 HSPs)
scaffold0597 (1-242)||(784-1025)
[»] chr2 (31 HSPs)
chr2 (1-242)||(9652702-9652943)
chr2 (1-227)||(21273872-21274096)
chr2 (1-147)||(22274930-22275076)
chr2 (1-191)||(25213256-25213448)
chr2 (1-147)||(22284163-22284309)
chr2 (30-147)||(15633451-15633568)
chr2 (116-221)||(22863235-22863340)
chr2 (116-221)||(36982291-36982396)
chr2 (116-215)||(8891549-8891648)
chr2 (116-190)||(463043-463117)
chr2 (116-219)||(24341238-24341341)
chr2 (116-190)||(14906312-14906386)
chr2 (116-190)||(23820388-23820462)
chr2 (116-190)||(19689273-19689347)
chr2 (116-190)||(20015328-20015402)
chr2 (1-235)||(7321725-7321962)
chr2 (116-226)||(17396492-17396599)
chr2 (117-242)||(32466177-32466301)
chr2 (116-190)||(33128372-33128446)
chr2 (116-226)||(25265227-25265335)
chr2 (116-190)||(12641517-12641591)
chr2 (167-236)||(27262176-27262248)
chr2 (116-192)||(28031090-28031166)
chr2 (117-192)||(21142203-21142278)
chr2 (116-190)||(8944153-8944227)
chr2 (116-190)||(12635743-12635817)
chr2 (116-190)||(12728699-12728773)
chr2 (116-194)||(17204659-17204737)
chr2 (116-190)||(34824782-34824856)
chr2 (9-70)||(20279627-20279688)
chr2 (117-190)||(23774444-23774517)
[»] scaffold0234 (1 HSPs)
scaffold0234 (1-242)||(17210-17451)
[»] chr7 (35 HSPs)
chr7 (1-242)||(2029129-2029370)
chr7 (1-242)||(3049790-3050037)
chr7 (1-190)||(42056146-42056336)
chr7 (1-227)||(2190008-2190233)
chr7 (9-189)||(15516720-15516901)
chr7 (1-147)||(126623-126769)
chr7 (1-147)||(1936918-1937064)
chr7 (1-147)||(32493947-32494093)
chr7 (1-147)||(111170-111316)
chr7 (116-221)||(11580588-11580693)
chr7 (116-242)||(16212071-16212202)
chr7 (128-221)||(13036865-13036958)
chr7 (116-217)||(36052971-36053071)
chr7 (149-242)||(17817261-17817359)
chr7 (149-242)||(19049642-19049740)
chr7 (116-219)||(15709469-15709572)
chr7 (114-217)||(25124448-25124550)
chr7 (116-190)||(7293333-7293407)
chr7 (116-190)||(11516544-11516618)
chr7 (116-190)||(15441436-15441510)
chr7 (116-190)||(30262001-30262075)
chr7 (1-100)||(13352160-13352259)
chr7 (116-190)||(14113861-14113935)
chr7 (117-190)||(25292210-25292283)
chr7 (116-227)||(13321334-13321443)
chr7 (116-219)||(36024452-36024556)
chr7 (116-192)||(47480900-47480976)
chr7 (1-100)||(39291457-39291556)
chr7 (117-192)||(10000243-10000318)
chr7 (128-190)||(14423512-14423574)
chr7 (167-235)||(3895395-3895465)
chr7 (167-235)||(39046434-39046504)
chr7 (117-192)||(48622539-48622614)
chr7 (116-190)||(13758677-13758751)
chr7 (116-192)||(371417-371493)
[»] chr5 (27 HSPs)
chr5 (1-242)||(21650903-21651144)
chr5 (1-242)||(21205134-21205379)
chr5 (1-242)||(2032018-2032260)
chr5 (1-189)||(11342893-11343081)
chr5 (1-189)||(16105851-16106040)
chr5 (8-219)||(25005031-25005240)
chr5 (116-221)||(27182398-27182503)
chr5 (128-242)||(23981310-23981425)
chr5 (118-219)||(18530917-18531018)
chr5 (116-190)||(108686-108760)
chr5 (116-190)||(20623286-20623360)
chr5 (116-190)||(21233400-21233474)
chr5 (116-190)||(37053061-37053135)
chr5 (1-70)||(22662653-22662722)
chr5 (116-219)||(22053682-22053785)
chr5 (116-190)||(16536514-16536588)
chr5 (116-190)||(23507270-23507344)
chr5 (116-190)||(25900278-25900352)
chr5 (128-192)||(7529240-7529304)
chr5 (128-227)||(32951024-32951121)
chr5 (116-190)||(1219395-1219469)
chr5 (131-192)||(17909838-17909899)
chr5 (117-190)||(23328865-23328938)
chr5 (117-190)||(24616469-24616542)
chr5 (117-190)||(24712845-24712918)
chr5 (117-190)||(24745863-24745936)
chr5 (116-192)||(9730234-9730310)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-219)||(55789-56007)
scaffold0032 (45-190)||(108033-108179)
[»] chr8 (24 HSPs)
chr8 (3-217)||(24385584-24385797)
chr8 (1-242)||(41506614-41506856)
chr8 (1-147)||(24716763-24716909)
chr8 (1-147)||(39115483-39115629)
chr8 (1-147)||(274651-274797)
chr8 (1-147)||(641052-641198)
chr8 (1-147)||(826858-827004)
chr8 (116-242)||(43373293-43373424)
chr8 (116-242)||(24928617-24928748)
chr8 (116-203)||(16193588-16193674)
chr8 (1-100)||(17502369-17502468)
chr8 (1-235)||(21259301-21259538)
chr8 (1-100)||(4234063-4234162)
chr8 (1-100)||(23218085-23218184)
chr8 (116-190)||(5238404-5238478)
chr8 (117-242)||(7000425-7000551)
chr8 (116-190)||(22907086-22907160)
chr8 (116-190)||(24661120-24661194)
chr8 (116-190)||(43685863-43685937)
chr8 (1-57)||(22321437-22321493)
chr8 (128-192)||(21494312-21494376)
chr8 (116-194)||(22886654-22886732)
chr8 (116-192)||(3431132-3431208)
chr8 (116-192)||(2545265-2545341)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-227)||(13208-13433)
[»] chr4 (28 HSPs)
chr4 (1-227)||(15272134-15272359)
chr4 (1-190)||(14951970-14952159)
chr4 (46-227)||(15135830-15136010)
chr4 (1-147)||(5682429-5682574)
chr4 (1-147)||(25119108-25119254)
chr4 (116-221)||(13246737-13246842)
chr4 (116-242)||(122194-122325)
chr4 (116-219)||(15674938-15675041)
chr4 (132-235)||(40885368-40885475)
chr4 (116-219)||(10104099-10104202)
chr4 (116-190)||(16608971-16609045)
chr4 (116-190)||(26680517-26680591)
chr4 (117-242)||(55376400-55376525)
chr4 (8-123)||(19559574-19559689)
chr4 (116-219)||(33241011-33241114)
chr4 (116-190)||(16327798-16327872)
chr4 (119-219)||(31132628-31132728)
chr4 (128-192)||(32460559-32460623)
chr4 (1-100)||(49071895-49071994)
chr4 (117-192)||(22738577-22738652)
chr4 (116-190)||(10488879-10488953)
chr4 (1-71)||(34177617-34177687)
chr4 (125-190)||(13048093-13048158)
chr4 (116-192)||(8045272-8045348)
chr4 (116-191)||(7131939-7132014)
chr4 (116-190)||(20001030-20001104)
chr4 (167-236)||(23269737-23269809)
chr4 (117-190)||(26339327-26339400)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-217)||(6375-6590)
[»] scaffold0004 (1 HSPs)
scaffold0004 (31-242)||(193298-193514)
[»] chr6 (25 HSPs)
chr6 (1-227)||(23995131-23995356)
chr6 (1-190)||(15742078-15742266)
chr6 (1-217)||(26089943-26090159)
chr6 (1-190)||(18002353-18002543)
chr6 (1-147)||(19983193-19983339)
chr6 (1-147)||(35015058-35015204)
chr6 (1-191)||(4991280-4991472)
chr6 (1-147)||(18583525-18583671)
chr6 (116-221)||(23148303-23148408)
chr6 (116-221)||(23153754-23153859)
chr6 (116-242)||(27751742-27751869)
chr6 (8-100)||(22585494-22585586)
chr6 (8-100)||(22590325-22590417)
chr6 (2-100)||(15004855-15004953)
chr6 (1-123)||(15889631-15889753)
chr6 (116-227)||(29666181-29666290)
chr6 (1-100)||(25640504-25640602)
chr6 (116-190)||(1649979-1650053)
chr6 (116-239)||(35009259-35009384)
chr6 (116-192)||(32276615-32276691)
chr6 (128-192)||(16299842-16299906)
chr6 (116-192)||(18823239-18823315)
chr6 (116-192)||(18839094-18839170)
chr6 (169-220)||(14128502-14128552)
chr6 (167-235)||(18570649-18570720)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-242)||(12319-12565)
[»] chr1 (14 HSPs)
chr1 (1-189)||(15861285-15861473)
chr1 (1-147)||(44034872-44035018)
chr1 (1-147)||(21860219-21860365)
chr1 (116-242)||(37844277-37844406)
chr1 (116-221)||(20445987-20446092)
chr1 (1-71)||(22367226-22367296)
chr1 (116-221)||(20893478-20893583)
chr1 (116-221)||(20531751-20531856)
chr1 (116-242)||(20913335-20913466)
chr1 (55-147)||(41218667-41218759)
chr1 (116-242)||(20931650-20931781)
chr1 (116-190)||(45051726-45051800)
chr1 (116-190)||(51452809-51452883)
chr1 (117-190)||(7640809-7640882)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-147)||(80072-80218)
[»] scaffold0303 (2 HSPs)
scaffold0303 (1-190)||(4304-4494)
scaffold0303 (1-71)||(5-75)
[»] scaffold0686 (2 HSPs)
scaffold0686 (1-147)||(5984-6130)
scaffold0686 (2-147)||(5778-5923)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-147)||(31181-31327)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-147)||(41517-41663)
scaffold0078 (116-190)||(36938-37012)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-147)||(162079-162225)
scaffold0016 (1-147)||(166165-166311)
[»] scaffold0132 (2 HSPs)
scaffold0132 (7-147)||(42568-42708)
scaffold0132 (116-239)||(13824-13949)
[»] scaffold0028 (3 HSPs)
scaffold0028 (9-147)||(130772-130911)
scaffold0028 (128-242)||(89284-89398)
scaffold0028 (128-221)||(107635-107728)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-147)||(30302-30448)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-147)||(353-498)
[»] scaffold0162 (3 HSPs)
scaffold0162 (116-242)||(26246-26372)
scaffold0162 (116-242)||(7996-8125)
scaffold0162 (116-190)||(12063-12137)
[»] scaffold0175 (3 HSPs)
scaffold0175 (157-242)||(15238-15323)
scaffold0175 (1-80)||(15157-15236)
scaffold0175 (116-190)||(840-914)
[»] scaffold0018 (1 HSPs)
scaffold0018 (116-242)||(51011-51140)
[»] scaffold0025 (2 HSPs)
scaffold0025 (116-242)||(146906-147037)
scaffold0025 (116-219)||(9160-9263)
[»] scaffold0106 (1 HSPs)
scaffold0106 (116-242)||(42034-42163)
[»] scaffold0498 (1 HSPs)
scaffold0498 (116-242)||(9183-9314)
[»] scaffold0001 (2 HSPs)
scaffold0001 (116-242)||(172210-172341)
scaffold0001 (116-242)||(177913-178044)
[»] scaffold0011 (1 HSPs)
scaffold0011 (128-224)||(123011-123107)
[»] scaffold0266 (2 HSPs)
scaffold0266 (116-242)||(1430-1561)
scaffold0266 (116-217)||(3440-3540)
[»] scaffold0008 (1 HSPs)
scaffold0008 (116-217)||(128027-128127)
[»] scaffold0012 (2 HSPs)
scaffold0012 (116-190)||(247324-247398)
scaffold0012 (116-190)||(34033-34107)
[»] scaffold0302 (1 HSPs)
scaffold0302 (116-242)||(12418-12550)
[»] scaffold0009 (1 HSPs)
scaffold0009 (116-242)||(272330-272461)
[»] scaffold0160 (1 HSPs)
scaffold0160 (117-242)||(339-465)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-123)||(44039-44161)
[»] scaffold0058 (1 HSPs)
scaffold0058 (113-227)||(57315-57427)
[»] scaffold0077 (1 HSPs)
scaffold0077 (116-242)||(36735-36869)
[»] scaffold0158 (1 HSPs)
scaffold0158 (117-235)||(25532-25650)
[»] scaffold0141 (2 HSPs)
scaffold0141 (116-190)||(22857-22931)
scaffold0141 (116-190)||(27112-27186)
[»] scaffold0124 (1 HSPs)
scaffold0124 (116-190)||(1454-1528)
[»] scaffold0118 (1 HSPs)
scaffold0118 (116-192)||(34264-34340)
[»] scaffold1295 (1 HSPs)
scaffold1295 (1-71)||(314-384)
[»] scaffold0772 (1 HSPs)
scaffold0772 (116-190)||(5846-5920)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-71)||(1478-1548)
[»] scaffold0207 (1 HSPs)
scaffold0207 (116-192)||(18026-18102)
[»] scaffold0125 (1 HSPs)
scaffold0125 (116-192)||(41965-42041)
[»] scaffold0084 (1 HSPs)
scaffold0084 (116-227)||(55936-56045)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-100)||(3785-3888)
[»] scaffold0066 (1 HSPs)
scaffold0066 (116-190)||(45338-45412)
[»] scaffold0413 (1 HSPs)
scaffold0413 (114-190)||(5948-6024)
[»] scaffold0173 (1 HSPs)
scaffold0173 (116-192)||(5549-5625)
[»] scaffold0029 (1 HSPs)
scaffold0029 (128-192)||(49708-49772)
[»] scaffold0816 (1 HSPs)
scaffold0816 (167-235)||(2872-2942)
[»] scaffold0335 (1 HSPs)
scaffold0335 (116-191)||(5433-5508)
[»] scaffold0467 (1 HSPs)
scaffold0467 (128-186)||(10218-10276)
[»] scaffold0215 (2 HSPs)
scaffold0215 (131-192)||(9221-9282)
scaffold0215 (131-192)||(16119-16180)
[»] scaffold0103 (1 HSPs)
scaffold0103 (167-235)||(34034-34105)
[»] scaffold0023 (1 HSPs)
scaffold0023 (116-242)||(48903-49034)
[»] scaffold0554 (1 HSPs)
scaffold0554 (167-234)||(2287-2357)
[»] scaffold0516 (1 HSPs)
scaffold0516 (117-192)||(12000-12075)
[»] scaffold0361 (1 HSPs)
scaffold0361 (140-191)||(3528-3579)
[»] scaffold0037 (1 HSPs)
scaffold0037 (128-190)||(95310-95372)
[»] scaffold0359 (1 HSPs)
scaffold0359 (167-229)||(11465-11529)
[»] scaffold0021 (1 HSPs)
scaffold0021 (167-235)||(12061-12132)
[»] scaffold0120 (1 HSPs)
scaffold0120 (167-235)||(21882-21954)


Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 54685348 - 54685107
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54685348 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 54685249  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54685248 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttagacttcaatttagctcctaatttcactcca 54685149  T
Q  201 atccttaattcttcaagttcttctctctaacccttgttcttc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  54685148 atccttaattcttcaagttcttctctctaacccttgttcttc 54685107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 33342089 - 33342330
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33342089 aacatattcaaacatatctctaccacattagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 33342188  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33342189 aaaagaattaaccaaatgattatgataaagactaaccctcttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaagttcactcca 33342288  T
Q  201 atccttaattcttcaagttcttctctctaacccttgttcttc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33342289 atccttaattcttcaagttcttctctctaacccttgttcttc 33342330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 38168122 - 38168369
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38168122 aacatattcaaacatatttctacaacataagtacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 38168221  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38168222 aaaagaattaaccaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaagttcactcca 38168321  T
Q  201 atccttaattcttcaag------ttcttctctctaacccttgttcttc 242  Q
    |||||||||||||||||       ||||||||||||||||||||||||    
T  38168322 atccttaattcttcaagctctccctcttctctctaacccttgttcttc 38168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 30153150 - 30153396
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30153150 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 30153249  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||||||||||  |||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||| ||||  ||||||||||||  |||| |||    
T  30153250 aaaagaattaattaaatgattatgataaaaactaacccccttaccttagatgaagattaatcccaacttagacttctctttagctcctaagctcacccca 30153349  T
Q  201 atccttaattcttcaag------ttcttctctctaacccttgttcttc 242  Q
    || ||| ||||||||||       ||||||||||||||||||||||||    
T  30153350 at-cttgattcttcaagctctccctcttctctctaacccttgttcttc 30153396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 53771249 - 53771474
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  53771249 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagag 53771348  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc 199  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||| ||    
T  53771349 aaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcac-cc 53771447  T
Q  200 aatccttaattcttcaagttcttctctc 227  Q
    ||| ||| |||| ||||| |||||||||    
T  53771448 aat-cttgattcctcaagctcttctctc 53771474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16261661 - 16261886
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  16261661 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattacgcatagaatcaagag 16261760  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc 199  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||| ||||||||||||||| ||||||||||||  |||| ||    
T  16261761 aaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcactttagctcctaagctcac-cc 16261859  T
Q  200 aatccttaattcttcaagttcttctctc 227  Q
    ||| ||| |||| ||||| |||||||||    
T  16261860 aat-cttgattcctcaagctcttctctc 16261886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 28558379 - 28558567
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28558379 aacatattcaaacatatctctatcacataagcacgaatttcaaagattaggttcatgataatcacttattctcataatcaattatgcatggaacaagaga 28558478  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 189  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  28558479 aaaagaattaactaaatgattatgataaaaactaaccctcttaccttagataaagattaatcccaacttaggcttcaattttgctccta 28558567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 23492581 - 23492770
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23492581 aacacattcaaacatatctctacaacataagcaagaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 23492680  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||| || ||||   ||||||||| |||||||||    
T  23492681 aaaagaattaactaaatgattatgataaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 23492770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 7854190 - 7854336
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7854190 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 7854289  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| || || |||||||| ||||||||    
T  7854290 aaaagaattaactaaatgattatgatgaaaactaacccccttacctt 7854336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17956031 - 17955885
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17956031 aacatattcagacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcgattatgcatagaacaagaga 17955932  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||    
T  17955931 aaaagaattaactaaatgattatgataaagactaacccccttacctt 17955885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 55513078 - 55513224
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  55513078 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatttccataatcaattatgcatagaacaagaga 55513177  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  55513178 aaaagaattaactaaatgattatgataaaaactaacccccttacctt 55513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 45581839 - 45581976
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45581839 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 45581938  T
Q  101 aaaagaattaaccaaatgattatcataaagactaaccc 138  Q
    |||||||||||| |||||||||| ||||| ||||||||    
T  45581939 aaaagaattaactaaatgattatgataaaaactaaccc 45581976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 3992758 - 3992904
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3992758 aacatattcaaacatatctctacaacataagcacggatttcaaaggttgagttcatgataattacttattctcataatcaattatgcatagaacaagaga 3992857  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  3992858 aaaagaattaactaaatgattatgataaaaactaacccccttacctt 3992904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 54038171 - 54038025
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54038171 aacatattcaaacatatatctacaatataagcacgaatgtcaaacattgagttcatgataatcacttattcccataatcaattatgcatagaacaagaga 54038072  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  54038071 aaaagaattaactaaatgattatgataaaaactaacccccttacctt 54038025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 2844399 - 2844545
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  2844399 aacatattaaaacaaaaatctacaacataagcacgaatttcaaagattgggttcatgataatcgcttattcccataatcaattatgcatagaataagaga 2844498  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||| ||| |||||||||| ||||| |||||||| ||||||||    
T  2844499 aaaagaatcaactaaatgattatgataaaaactaacccccttacctt 2844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 13839200 - 13839326
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| |||||||| ||||||| |||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  13839200 atgattatgatgaagactaacccccttaccttagatgaagagtaatccctacttaggcttcaatttagctcctaagctcactccaatcctcaattcttca 13839299  T
Q  216 agttcttctctctaacccttgttcttc 242  Q
    |||||||||||||||||||| ||||||    
T  13839300 agttcttctctctaaccctttttcttc 13839326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 2050115 - 2050246
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  2050115 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaaactcactccaat-cttgattcttca 2050213  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  2050214 agctctccctcttctctctaacccttgttcttc 2050246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 12030105 - 12029973
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||| || |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  12030105 atgattatgataatgattaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatccttagttcttca 12030006  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  12030005 agctctccctcttctctctaacccttgttcttc 12029973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 19260781 - 19260650
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||| |||| |||||||||| ||| ||||||||    
T  19260781 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttagacttcaatttagctcttaatctcactccaat-cttgattcttca 19260683  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  19260682 agctctccctcttctctctaacccttgttcttc 19260650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18970129 - 18970231
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| | ||||||||  ||||||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||| ||||||    
T  18970129 aacatacttaaacatatcactacaacatgagcacgaatttcaaagattgggttcataataatcacttattcaaataatcacttatgcatagaaaaagaga 18970228  T
Q  101 aaa 103  Q
    |||    
T  18970229 aaa 18970231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 17912430 - 17912330
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||| || |||||||||||||||||||||  ||||||||| |||| ||||||||    
T  17912430 atgattatgataaagactaacccccttaccttagataaagattaatcccacctcaggcttcaatttagctcctaagctcactccaa-ccttgattcttca 17912332  T
Q  216 ag 217  Q
    ||    
T  17912331 ag 17912330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 5240628 - 5240530
Alignment:
Q  149 gatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaag------ttcttctctctaacccttgttcttc 242  Q
    |||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||| ||||||||||       ||||||||||||||||||||||||    
T  5240628 gatgaagattaatcccaacttaggcttcaatttagctcgtaagctcactccaat-cttgattcttcaagctctccctcttctctctaacccttgttcttc 5240530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 11986112 - 11986003
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||||  |||| |||||  || ||||||||    
T  11986112 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcaatttagctcctaagctcaccccaat--ttgattcttca 11986015  T
Q  216 agttcttctctc 227  Q
    |  |||||||||    
T  11986014 aactcttctctc 11986003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 2449184 - 2449110
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 2449110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 13954836 - 13954728
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||  |||| |||||  |  ||||||||    
T  13954836 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcac-ccaat--tggattcttca 13954740  T
Q  216 agttcttctctc 227  Q
    ||||||||||||    
T  13954739 agttcttctctc 13954728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 45861122 - 45861230
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||  |||| |||||  |  ||||||||    
T  45861122 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcac-ccaat--tggattcttca 45861218  T
Q  216 agttcttctctc 227  Q
    ||||||||||||    
T  45861219 agttcttctctc 45861230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 51961065 - 51960938
Alignment:
Q  114 aaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattctt 213  Q
    |||||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||| ||||| |||| ||||||  ||||| | ||| ||| ||||||    
T  51961065 aaatgattatgatgaagactaacccccttaccttagataatgattaatccaaacttagacttcactttacctcctagattcaccctaattcttgattctt 51960966  T
Q  214 caagttcttc--tctctaacccttgttc 239  Q
    ||||||  ||  ||||||||||||||||    
T  51960965 caagtttctccttctctaacccttgttc 51960938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 15615137 - 15615211
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| ||||||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaa 15615211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48421785 - 48421855
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 71  Q
    |||||| ||||||||||  ||||||||| |||| |||||||||||||||||||||  ||||||||||||||    
T  48421785 aacatactcaaacatatcactacaacatgagcatgaatttcaaagattgggttcacaataatcacttattc 48421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 14285289 - 14285365
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| |||||| |||||| ||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaatt 14285365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15550806 - 15550876
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 71  Q
    |||||| ||||||||||  ||||||||| |||||||||||||||  |||||||||  ||||||||||||||    
T  15550806 aacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattc 15550876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 14842519 - 14842445
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| || ||||||||| || ||||   ||||||||| |||||||||    
T  14842519 atgattatgataaagactaacccccttaccttagaagaagattaaccctaactcttgcttcaattcagctcctaa 14842445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 19947026 - 19947100
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||||||||||| |||| |||||||    
T  19947026 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaa 19947100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 8268682 - 8268608
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  8268682 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 8268608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 8275782 - 8275708
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  8275782 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 8275708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 18896993 - 18896919
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| ||||||||||| ||||||||| || ||||   ||||||||| |||||||||    
T  18896993 atgattatgataataactaacccccttaccttggaagaagattaacccaaactcttgcttcaattcagctcctaa 18896919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 12264741 - 12264668
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 189  Q
    |||||||| ||||  |||||||| |||||||| || || ||||||||||||| |  ||||||||| ||||||||    
T  12264741 atgattatgataataactaacccccttacctttgaagatgattaatcccaacctttgcttcaattcagctccta 12264668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 11477115 - 11477051
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||||||| |||||||| | | | ||||||| | ||||||||||||| |||| |||||||||    
T  11477115 aagactaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaatt 11477051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 16933901 - 16933825
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| |||||||||||||| |||||||| | | | ||| ||| | |||||  |||||| ||||||||||||||    
T  16933901 atgattatgataaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt 16933825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 19570564 - 19570497
Alignment:
Q  170 aggcttcaatttagctcctaatttcactccaatccttaattcttcaagt--tcttctctctaaccctt 235  Q
    |||||| ||||| |||||||  || || ||||||||| |||||||||||  |||||||||||||||||    
T  19570564 aggcttgaattttgctcctagcttaaccccaatccttgattcttcaagtcctcttctctctaaccctt 19570497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 10030 - 9788
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaatt-atgcatagaacaagag 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  10030 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattttcataatcaatttatgcatagaacaagag 9931  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc 199  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9930 aaaaagaattaaccaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaagttcactcc 9831  T
Q  200 aatccttaattcttcaagttcttctctctaacccttgttcttc 242  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9830 aatccttaattcttcaagttcttctctctaacccttgttcttc 9788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 1025 - 784
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1025 aacatattaaaacaaacctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 926  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  925 aaaagaattaactaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaagttcactcca 826  T
Q  201 atccttaattcttcaagttcttctctctaacccttgttcttc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  825 atccttaattcttcaagttcttctctctaacccttgttcttc 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9652943 - 9652702
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  9652943 aacatattcaaacatatctctacaacataaccacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaaa 9652844  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  9652843 aaaagaattaaccaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggtttcaatttagctcctaagttcactcca 9652744  T
Q  201 atccttaattcttcaagttcttctctctaacccttgttcttc 242  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  9652743 atccttaattcttcaagttcttctctctaacccttattcttc 9652702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 21274096 - 21273872
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21274096 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagag 21273997  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc 199  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||| |||  |||| ||    
T  21273996 aaaaagaattaatcaaatgattatgataaagactaaccc-cttaccttagataaagattaatcccaacttaggcttcactttagctcataagctcac-cc 21273899  T
Q  200 aatccttaattcttcaagttcttctctc 227  Q
    ||| ||| |||| ||||| |||||||||    
T  21273898 aat-cttgattcctcaagctcttctctc 21273872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 22274930 - 22275076
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22274930 aacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 22275029  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| |||||| ||||||| ||||||||    
T  22275030 aaaagaattaactaaatgattatgataaaggctaacccccttacctt 22275076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 25213256 - 25213448
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25213256 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagag 25213355  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcc-caacttaggcttcaatttagctcctaat 191  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||| || || ||||| |||  ||||   ||||||||| ||||||||||    
T  25213356 aaaaagaattaatcaaatgattatgataaagactaacccccttacctttgaagatgattattcctaaactcttgcttcaattcagctcctaat 25213448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 22284163 - 22284309
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22284163 aacatattcaaacatatctctaccacataagcacgaatttcaaagattgagttcatgataatcacttattctcataatcaaatatgcatagaacaagaga 22284262  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||    
T  22284263 aaaagaattaactaaatgattatgataaagactaacccccttacctt 22284309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 15633451 - 15633568
Alignment:
Q  30 agcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatcataaa 129  Q
    |||||||| |||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  15633451 agcacgaaattcaagaattgggttcattataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaagtgattatgataaa 15633550  T
Q  130 gactaacccacttacctt 147  Q
    ||||||||  ||||||||    
T  15633551 gactaacctccttacctt 15633568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 22863235 - 22863340
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||| |||||||||||||||  |||| ||||||||| ||||||||    
T  22863235 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggctgcaatttagctcctaagctcaccccaatccttgattcttca 22863334  T
Q  216 agttct 221  Q
    ||||||    
T  22863335 agttct 22863340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 36982396 - 36982291
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| |||| |||| |||||||||||||||||||||||||| |  ||||||||||||||| |||||||    
T  36982396 atgattatgataaagactaacccccttaccttagataaagactaataccaacttaggcttcaatttagctcctcagctcactccaatccttagttcttca 36982297  T
Q  216 agttct 221  Q
    ||||||    
T  36982296 agttct 36982291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 8891549 - 8891648
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| ||||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||| ||||||  |||||||||||||| ||| ||||    
T  8891549 atgattatgataaagactaacccctttaccttagataaagattaatcccaacttaggcttcaatttagttcctaagctcactccaatccttgattgttca 8891648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 463043 - 463117
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  463043 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 463117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 24341341 - 24341238
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||||| ||||||||||||  |||||||||| ||| || |||||    
T  24341341 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcattttagctcctaagctcactccaattcttgatgcttca 24341242  T
Q  216 agtt 219  Q
    ||||    
T  24341241 agtt 24341238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 14906386 - 14906312
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 14906312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 23820388 - 23820462
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 23820462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 19689347 - 19689273
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| ||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaa 19689273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 20015328 - 20015402
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||| || |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 20015402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 7321725 - 7321962
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  ||||||||| |||||||||||||||  |||||||||  ||| ||||||||||  |||| ||  ||||||||| | ||||||    
T  7321725 aacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaatagtcacttattcaaataagcacgtatgcataggaaaagaga 7321824  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaa-tcccaa-cttaggcttcaatttagctccta-atttcact 197  Q
      |  ||||||| || ||||||| || ||  ||||||| |||||||| | |  ||||||| |||||| || |  ||||||||||||||||| || ||  |    
T  7321825 gtagaaattaactaagtgattataatgaattctaacccccttaccttagtt--agattaattcccaagctcaaacttcaatttagctcctagatctc-tt 7321921  T
Q  198 ccaatccttaattcttcaagt---tcttctctctaaccctt 235  Q
    ||||||||| | |||||||||   |||||||||||||||||    
T  7321922 ccaatccttgaatcttcaagttcctcttctctctaaccctt 7321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 17396599 - 17396492
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  || ||| ||||||| ||||||||||||||  |||| |||||  |  ||||||||    
T  17396599 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagctcac-ccaat--tggattcttca 17396503  T
Q  216 agttcttctct 226  Q
    |||||||||||    
T  17396502 agttcttctct 17396492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 32466177 - 32466301
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaa 216  Q
    ||||||| || ||||||||||| |||||||| ||| | ||| || || ||||||||||||||||||||||||||  |||| ||||| |||  ||||||||    
T  32466177 tgattatgatgaagactaaccc-cttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagctcac-ccaattcttggttcttcaa 32466274  T
Q  217 gttcttctc-tctaacccttgttcttc 242  Q
    ||||| | | |||||||||| ||||||    
T  32466275 gttctccacttctaaccctttttcttc 32466301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 33128372 - 33128446
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||    
T  33128372 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttagctcctaa 33128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 25265335 - 25265227
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| ||||| || ||| | ||||||||| ||| ||||||||| ||||||||||||  | || |||||  || ||||||||    
T  25265335 atgattatgatgaagactaacccccttacattagataatgattaatccaaacctaggcttcactttagctcctaagcttaccccaat--ttgattcttca 25265238  T
Q  216 agttcttctct 226  Q
    || ||||||||    
T  25265237 agctcttctct 25265227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 12641591 - 12641517
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| |||||||||||| || ||||   |||||||||||||||||||    
T  12641591 atgattatgataataactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaa 12641517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 27262176 - 27262248
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt---tcttctctctaacccttg 236  Q
    |||||||||||||||||||||||  ||  | ||||||||| |||||||||||   ||||||||||||||||||    
T  27262176 cttaggcttcaatttagctcctagctttcccccaatccttgattcttcaagttcctcttctctctaacccttg 27262248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 28031166 - 28031090
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||| | ||||||||||||| |||| |||||||||    
T  28031166 atgattatgatgaagactaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaatt 28031090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 21142203 - 21142278
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||| || || || ||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||||    
T  21142203 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaatt 21142278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 8944153 - 8944227
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  8944153 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 8944227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 12635817 - 12635743
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  12635817 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 12635743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 12728699 - 12728773
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  12728699 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 12728773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 17204659 - 17204737
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttc 194  Q
    |||||||| || ||||||||||| ||||| || | | | ||||||||| ||||||| ||||| |||| |||||||||||    
T  17204659 atgattatgatgaagactaacccccttactttaggttatgattaatccaaacttagacttcactttaactcctaatttc 17204737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 34824782 - 34824856
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  34824782 atgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 34824856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 20279627 - 20279688
Alignment:
Q  9 caaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 70  Q
    ||||||||| |||| ||||| |||||||||||||| ||||  |||||  |||||||||||||    
T  20279627 caaacatatctctataacatgagcacgaatttcaacgattaagttcaccataatcacttatt 20279688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 23774444 - 23774517
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  23774444 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 23774517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 17451 - 17210
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17451 aacatattcaaacatatctctaccacataagcactaatttcaaagattgggttcatgataatcaattattctcataatcaattatgcatagaacaagaga 17352  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||||||||| | |||||||||| |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  17351 aaaagaattacctaaatgattatgataaagactaacccgcttaccttagatggagattaatcccaacttaggcttcaatttagctcctaagttcactcca 17252  T
Q  201 atccttaattcttcaagttcttctctctaacccttgttcttc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17251 atccttaattcttcaagttcttctctctaacccttgttcttc 17210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 2029129 - 2029370
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2029129 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 2029228  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||| ||||||| |||||||||| |||||||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  2029229 aaaaaaattaactaaatgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcaatttagctcctaagttcactcca 2029328  T
Q  201 atccttaattcttcaagttcttctctctaacccttgttcttc 242  Q
    ||  |||||||||||||||||||||||||||||||| |||||    
T  2029329 atttttaattcttcaagttcttctctctaacccttgctcttc 2029370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 3049790 - 3050037
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3049790 aacatattcaaacatatctctacaatataaacacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 3049889  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  3049890 aaaagaattaactaaatgattatgataaaaactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcttaagttcactcca 3049989  T
Q  201 atccttaattcttcaag------ttcttctctctaacccttgttcttc 242  Q
    |||||||||||||||||       ||||||||||||||||||||||||    
T  3049990 atccttaattcttcaagctctccctcttctctctaacccttgttcttc 3050037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 42056336 - 42056146
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42056336 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagag 42056237  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  42056236 aaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 42056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 2190233 - 2190008
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  2190233 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtacatgataatcacttattctcataatcaattatgcatagaatcaagag 2190134  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc 199  Q
    |||||||||||||||||||||||| ||||| |||||||  |||||||| ||| ||||||||||||||||||||||||| |||| |||||||  |||| ||    
T  2190133 aaaaagaattaaccaaatgattatgataaaaactaaccgccttaccttagataaagattaatcccaacttaggcttcactttaactcctaagctcac-cc 2190035  T
Q  200 aatccttaattcttcaagttcttctctc 227  Q
    ||| ||| |||| ||||| |||||||||    
T  2190034 aat-cttgattcctcaagctcttctctc 2190008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 15516901 - 15516720
Alignment:
Q  9 caaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaa 107  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15516901 caaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaa 15516802  T
Q  108 ttaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 189  Q
    |||||||||||||||| |||||||||||||| ||||| || || || |||||| || ||||   ||||||||| ||||||||    
T  15516801 ttaaccaaatgattatgataaagactaacccccttacatttgaagatgattaaccctaactcttgcttcaattcagctccta 15516720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 126623 - 126769
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  126623 aacatattcaaacatatctctgcaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaataga 126722  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  126723 aaaagaattaactaaatgattatgataaaaactaacccccttacctt 126769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 1937064 - 1936918
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1937064 aacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 1936965  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| ||||| |||||||  ||||||||    
T  1936964 aaaagaattaactaaatgattatgataaaaactaacctccttacctt 1936918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32494093 - 32493947
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32494093 aacatattcaaacatatctctacaacataaacacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 32493994  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  32493993 aaaagaattaactaaatgattatgataaaaactaacccccttacctt 32493947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 111316 - 111170
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  111316 aacatattcaaacatatctctacaacataagcacgaatttcaaatattgggttcatgataatcacttattttcataatcaattatgcatagaacaagaga 111217  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| || || |||||||| ||||||||    
T  111216 aaaagaattaactaaatgattatgatgaaaactaacccccttacctt 111170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 11580693 - 11580588
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| ||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  11580693 atgattatgataaagactaatccccttaccttagattaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatccttgattcttca 11580594  T
Q  216 agttct 221  Q
    ||||||    
T  11580593 agttct 11580588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 16212071 - 16212202
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  16212071 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaagctcactccaat-cttgattcttca 16212169  T
Q  216 a------gttcttctctctaacccttgttcttc 242  Q
    |        ||||||||||||||||||||||||    
T  16212170 aactctccctcttctctctaacccttgttcttc 16212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 13036958 - 13036865
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagttct 221  Q
    ||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||||||    
T  13036958 aagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagcttactccaatccttgattcttcaagttct 13036865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 36052971 - 36053071
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  36052971 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 36053069  T
Q  216 ag 217  Q
    ||    
T  36053070 ag 36053071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 17817359 - 17817261
Alignment:
Q  149 gatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaag------ttcttctctctaacccttgttcttc 242  Q
    |||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||| ||||||||||       ||||||||||||||||||||||||    
T  17817359 gatgaagattaatcccaacttaggcttcaatttagctcgtaagctcactccaat-cttgattcttcaagctctccctcttctctctaacccttgttcttc 17817261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 19049642 - 19049740
Alignment:
Q  149 gatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaag------ttcttctctctaacccttgttcttc 242  Q
    |||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||| ||||||||||       ||||||||||||||||||||||||    
T  19049642 gatgaagattaatcccaacttaggcttcaatttagctcgtaagctcactccaat-cttgattcttcaagctctccctcttctctctaacccttgttcttc 19049740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 15709469 - 15709572
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || |||||||| || |||||||| ||| | |||||| | |||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  15709469 atgattatgatgaagactaatcctcttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaattcttgattcttca 15709568  T
Q  216 agtt 219  Q
    ||||    
T  15709569 agtt 15709572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 25124448 - 25124550
Alignment:
Q  114 aaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattctt 213  Q
    |||||||||| || ||||||||||| |||||||| ||| | ||||||||  ||||||||||||| ||||||||||||  |||||||||| ||| ||||||    
T  25124448 aaatgattatgatgaagactaacccccttaccttagataatgattaatctaaacttaggcttcactttagctcctaagctcactccaat-cttgattctt 25124546  T
Q  214 caag 217  Q
    ||||    
T  25124547 caag 25124550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 7293333 - 7293407
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 7293407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 11516544 - 11516618
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 11516618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 15441510 - 15441436
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 15441436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 30262075 - 30262001
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 30262001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13352160 - 13352259
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| | ||||||||  ||||||||| |||||||||||||| | |||||||||  ||||||||||||||  |||| || |||||||||||| ||||||    
T  13352160 aacatactgaaacatatcactacaacatgagcacgaatttcaagggttgggttcacaataatcacttattcaaataaacacttatgcatagaaaaagaga 13352259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 14113935 - 14113861
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||| ||||    
T  14113935 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaa 14113861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 25292283 - 25292210
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||| |||||||||||||| |||| ||| |||||||||||  || ||| ||||||||||||||||||||||    
T  25292283 tgattatgataaagactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaa 25292210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 13321334 - 13321443
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||| ||||||||| ||||||||||||  | || |||||  || ||||||||    
T  13321334 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacctaggcttcactttagctcctaagcttaccccaat--ttgattcttca 13321431  T
Q  216 agttcttctctc 227  Q
    || |||||||||    
T  13321432 agctcttctctc 13321443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 36024452 - 36024556
Alignment:
Q  116 atgattatcataaagactaacccac-ttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttc 214  Q
    |||||||| || ||||||||||| | ||||||| ||| | |||||| | |||||||||||||| |||||||| |||  |||||||||| ||| |||||||    
T  36024452 atgattatgatgaagactaaccccccttaccttagattatgattaacctcaacttaggcttcactttagctcataagctcactccaattcttgattcttc 36024551  T
Q  215 aagtt 219  Q
    |||||    
T  36024552 aagtt 36024556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 47480976 - 47480900
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| |||| |||||||||    
T  47480976 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttacctcctaatt 47480900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 39291556 - 39291457
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  ||||||||| |||||||||||||||  || ||||||  ||||||||||||||  ||||  | |||||||||||| ||||||    
T  39291556 aacatactcaaacatatcactacaacatgagcacgaatttcaaaagttaggttcacaataatcacttattcaaataagtacttatgcatagaaaaagaga 39291457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 10000318 - 10000243
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||| || ||||| ||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||||    
T  10000318 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaatt 10000243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 14423574 - 14423512
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||| ||||    
T  14423574 aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaa 14423512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 3895395 - 3895465
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt--tcttctctctaaccctt 235  Q
    ||||||||||||||| |||||||  |  || ||||||||| |||||||||||  |||||||||||||||||    
T  3895395 cttaggcttcaattttgctcctagctcaaccccaatccttgattcttcaagtcctcttctctctaaccctt 3895465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 39046504 - 39046434
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt--tcttctctctaaccctt 235  Q
    |||| |||||||||| |||||||  || || ||||||||| |||||||||||  |||||||||||||||||    
T  39046504 cttaagcttcaattttgctcctagcttaaccccaatccttgattcttcaagtcctcttctctctaaccctt 39046434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 48622614 - 48622539
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||| || || || ||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||||    
T  48622614 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaatt 48622539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 13758677 - 13758751
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  13758677 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 13758751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 371417 - 371493
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||| ||| | ||||| ||||||| ||||||||||||||    
T  371417 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaatt 371493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 21650903 - 21651144
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  21650903 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaactatgcacagaacaagaga 21651002  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    ||||||||||||||||||||||| ||||| | |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  21651003 aaaagaattaaccaaatgattatgataaatattaacccccttaccttagatgaagattaatcccaacttagacttcaatttagctcctaagctcactcca 21651102  T
Q  201 atccttaattcttcaagttcttctctctaacccttgttcttc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21651103 atccttaattcttcaagttcttctctctaacccttgttcttc 21651144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 21205134 - 21205379
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21205134 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 21205233  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    ||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||||    
T  21205234 aaaagaattaaccaaatgattatgataaagactaatcc-cttatcttagatgaagattaattccaacttaggcttcaatttagctcctaagctcactcca 21205332  T
Q  201 atccttaattcttcaagtt------cttctctctaacccttgttcttc 242  Q
    || ||| |||||||||| |      |||||||||||||||||||||||    
T  21205333 at-cttgattcttcaagctctcccacttctctctaacccttgttcttc 21205379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 2032018 - 2032260
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2032018 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 2032117  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||||||||||| ||| |||||| || || |||||||| |||||||| ||| | |||||| || ||||||||||||||||||||||||||  |||| |||    
T  2032118 aaaagaattaactaaacgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaagctcacccca 2032217  T
Q  201 atccttaattcttcaagttcttctc-tctaacccttgttcttc 242  Q
    || ||| |||||||||||||| ||| |||||||||| ||||||    
T  2032218 attcttgattcttcaagttctcctcttctaaccctttttcttc 2032260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 11342893 - 11343081
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342893 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 11342992  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 189  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||| || ||||||||| || ||| |  ||||||||| ||||||||    
T  11342993 aaaagaattaactaaatgattatgataaaaactaacccccttacctttgaagaagattaaccctaacctctgcttcaattcagctccta 11343081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 16105851 - 16106040
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16105851 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagag 16105950  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 189  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||| || ||||||||| |  ||||   ||||||||| ||||||||    
T  16105951 aaaaagaattaatcaaatgattatgataaagactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctccta 16106040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 25005031 - 25005240
Alignment:
Q  8 tcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaa 107  Q
    ||||||||||  || |||||| ||||||||||||||||||||||||||  ||||||||||||||   | | || |||| |||| |||||  ||||||  |    
T  25005031 tcaaacatatcacttcaacatgagcacgaatttcaaagattgggttcacaataatcacttattcaattgagcacttattcatacaacaattgaaaaacta 25005130  T
Q  108 ttaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatcctta 207  Q
      ||| |||||||||| || ||||||||||| ||||| || ||| | ||||||||| ||||||||||||| |||||||||||  ||||||||||| |||     
T  25005131 --aactaaatgattatgatgaagactaacccccttactttagataatgattaatccaaacttaggcttcactttagctcctagattcactccaattcttg 25005228  T
Q  208 attcttcaagtt 219  Q
    ||||||||||||    
T  25005229 attcttcaagtt 25005240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 27182503 - 27182398
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  27182503 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 27182404  T
Q  216 agttct 221  Q
    ||||||    
T  27182403 agttct 27182398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 23981425 - 23981310
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagttcttctc-t 226  Q
    ||||||||||| |||||||  ||||||||||||||| ||||||||||||||||||||||||||  |||| ||||| ||| |||||||||| ||| ||| |    
T  23981425 aagactaacccccttacctaagatgaagattaatccaaacttaggcttcaatttagctcctaagctcaccccaattcttgattcttcaagatctcctctt 23981326  T
Q  227 ctaacccttgttcttc 242  Q
    ||||||||||||||||    
T  23981325 ctaacccttgttcttc 23981310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 18531018 - 18530917
Alignment:
Q  118 gattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaag 217  Q
    |||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||||| ||||||||||||  |||||||||| ||| ||||||||||    
T  18531018 gattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaattcttgattcttcaag 18530919  T
Q  218 tt 219  Q
    ||    
T  18530918 tt 18530917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 108760 - 108686
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| || ||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||| |||||||    
T  108760 atgattatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttacctcctaa 108686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 20623286 - 20623360
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 20623360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 21233474 - 21233400
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 21233400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 37053061 - 37053135
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 37053135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22662722 - 22662653
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttatt 70  Q
    |||||||||||| ||||  ||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  22662722 aacatattcaaatatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcacttatt 22662653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 22053785 - 22053682
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||| ||||| ||||||||||||  ||||| |||| ||| ||||||||    
T  22053785 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttagacttcactttagctcctaagctcacttcaattcttgattcttca 22053686  T
Q  216 agtt 219  Q
    ||||    
T  22053685 agtt 22053682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 16536514 - 16536588
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||| ||| |||||||||||  || ||| ||||||||||||||||||||||    
T  16536514 atgattatgataaagactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaa 16536588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 23507270 - 23507344
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||| |||||||| |||||| |||| |||||||    
T  23507270 atgattatgataaagactaacccccttaccttagataaagattaattccaacttatgcttcactttaactcctaa 23507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 25900352 - 25900278
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||| ||||||||||||||    
T  25900352 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaa 25900278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 7529240 - 7529304
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| ||||||||| ||||    
T  7529240 aagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcccaatt 7529304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 32951024 - 32951121
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagttcttctctc 227  Q
    ||||||||||| ||||||||  || | ||||||| | ||||||| ||||||||||||||||||  | || |||||  || |||||||||| |||||||||    
T  32951024 aagactaacccccttaccttaaataatgattaattcaaacttagacttcaatttagctcctaagcttaccccaat--ttgattcttcaagctcttctctc 32951121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 1219469 - 1219395
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  1219469 atgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 1219395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 17909838 - 17909899
Alignment:
Q  131 actaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| |||||||| | | | ||||||||| ||||||||||||| |||| |||||||||    
T  17909838 actaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaatt 17909899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 23328865 - 23328938
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  23328865 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 23328938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 24616469 - 24616542
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  24616469 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 24616542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 24712845 - 24712918
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  24712845 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 24712918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 24745863 - 24745936
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  24745863 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 24745936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 9730310 - 9730234
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||| ||| | ||||| ||||||| ||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaatt 9730234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 175; Significance: 2e-94; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 55789 - 56007
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55789 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 55888  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||||  || |||||    
T  55889 aaaagaattaactaaatgattatgataaagactaacccccttaccttagataaagattaatcccaatttaggcttcaatttagctcctaagctctctcca 55988  T
Q  201 atccttaattcttcaagtt 219  Q
    || ||| ||||||||||||    
T  55989 attcttgattcttcaagtt 56007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 108179 - 108033
Alignment:
Q  45 gattgggttcatgataatcacttattctcataatcaattatgcatagaac-aagagaaaaagaattaaccaaatgattatcataaagactaacccactta 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  108179 gattgggttcatgataatcacttattctcataatcaattatgcatagaatgaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 108080  T
Q  144 ccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||||    
T  108079 ccttagatgaagattaattccaacttaggcttcaattcagctcctaa 108033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 24385797 - 24385584
Alignment:
Q  3 catattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaa 102  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24385797 catattcaaacatatctctacaacataagcacgaatttcaaagattgggttcataataatcacttattctcataatcaattatgcatagaacaagagaaa 24385698  T
Q  103 aagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaat 202  Q
    | |||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  24385697 aggaattaactaaatgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcactttagctcctaagctcactccaat 24385598  T
Q  203 ccttaattcttcaag 217  Q
     ||| ||||||||||    
T  24385597 -cttgattcttcaag 24385584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 41506856 - 41506614
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41506856 aacatattcaaacatatctctacaacataagcacggatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 41506757  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||||||||||| |||||||||| || || |||||||| |||||||| ||| | |||||| || |||||||||||||||||||||| |||  |||| |||    
T  41506756 aaaagaattaactaaatgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcttaagctcacccca 41506657  T
Q  201 atccttaattcttcaagttcttctc-tctaacccttgttcttc 242  Q
    || ||| |||||||||||||| ||| |||||||||| ||||||    
T  41506656 attcttgattcttcaagttctcctcttctaaccctttttcttc 41506614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24716909 - 24716763
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24716909 aacatattcaaacatatctctaccatataaccacgaatttcaaagatcgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 24716810  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||    
T  24716809 aaaagaattaactaaatgattatgataaagactaacccccttacctt 24716763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 39115483 - 39115629
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39115483 aacatattcaaacatatctttacaacataagcacgaatgtcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 39115582  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| || || |||||| | ||||||||    
T  39115583 aaaagaattaactaaatgattatgatgaaaactaacacccttacctt 39115629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 274651 - 274797
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  274651 aacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcataggacaagaga 274750  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    ||| | |||||| |||||||||| ||||| |||||||| ||||||||    
T  274751 aaatggattaactaaatgattatgataaaaactaacccccttacctt 274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 641198 - 641052
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  641198 aacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcataggacaagaga 641099  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    ||| | |||||| |||||||||| ||||| |||||||| ||||||||    
T  641098 aaatggattaactaaatgattatgataaaaactaacccccttacctt 641052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 827004 - 826858
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  827004 aacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcataggacaagaga 826905  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    ||| | |||||| |||||||||| ||||| |||||||| ||||||||    
T  826904 aaatggattaactaaatgattatgataaaaactaacccccttacctt 826858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 43373424 - 43373293
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  43373424 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 43373326  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||      ||||||||| |||||||||||||||    
T  43373325 agctctccttcttctctttaacccttgttcttc 43373293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 24928748 - 24928617
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| ||||||||||||||  ||||||| ||| ||||||||||||||||||| ||||||||||||||||||  |||||||||| ||| ||||||||    
T  24928748 atgattatgataaagactaaccccattaccttagataaagattaatcccaacttagacttcaatttagctcctaagctcactccaat-cttgattcttca 24928650  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  24928649 agatctccctcttctctctaacccttgttcttc 24928617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 16193674 - 16193588
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatc 203  Q
    |||||||| |||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||  |||||||||||    
T  16193674 atgattatgataaagactaaccc-cttaccttagataaagatgaatcccaacttaggcttcaatttagctcctaagctcactccaatc 16193588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 17502369 - 17502468
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||  |||| || |||||||||||| ||||||    
T  17502369 aacatactcaaacatatcactacaacatgagcacaaatttcaaagattgggttcataataatcacttattcaaataagcacttatgcatagaaaaagaga 17502468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 21259538 - 21259301
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  ||||||||| |||||||||||||||  |||||||||  ||||||||||||||  |||| || |||||||||||| ||||||    
T  21259538 aacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagaga 21259439  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaat--cccaacttaggcttcaatttagctcctaatttcactc 198  Q
      |  ||||||| || ||||||| || ||  ||||||| |||||||| | |  ||||||||  || | |||| ||||||||||||||||||  |    ||    
T  21259438 gtagaaattaactaagtgattatgatgaattctaacccccttaccttagtt--agattaattccctagcttaagcttcaatttagctcctagctctcttc 21259341  T
Q  199 caatccttaattcttcaagt---tcttctctctaaccctt 235  Q
    |||||||| | |||||||||   |||||||||||||||||    
T  21259340 caatccttgaatcttcaagttcctcttctctctaaccctt 21259301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 4234063 - 4234162
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  || |||||| ||||| ||||||||||||||||||||  ||||||||||||||  |||| || |||||||||||| ||||||    
T  4234063 aacatactcaaacatatcactgcaacatgagcacaaatttcaaagattgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagaga 4234162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 23218085 - 23218184
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||  |||||||||  ||||||||||||||  |||| || |||||||||||| ||||||    
T  23218085 aacatactcaaacatatcactaccacataagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagaga 23218184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 5238404 - 5238478
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 5238478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 7000551 - 7000425
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaa 216  Q
    ||||||| || || |||||||| ||||| || ||| | |||||| || ||||||||||||||||||||||||||  |||| ||||| ||| ||||| |||    
T  7000551 tgattatgatgaaaactaacccccttactttagataaggattaacccaaacttaggcttcaatttagctcctaagctcaccccaattcttgattctacaa 7000452  T
Q  217 gttcttctc-tctaacccttgttcttc 242  Q
    ||||| ||| |||||||||| ||||||    
T  7000451 gttctcctcttctaaccctttttcttc 7000425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 22907160 - 22907086
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 22907086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 24661194 - 24661120
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 24661120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 43685863 - 43685937
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 43685937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22321493 - 22321437
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatg 57  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  22321493 aacatattcaaacatatctctacaacctgagcacgaatttcaaagattgggttcatg 22321437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 21494376 - 21494312
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| ||||||||||||||    
T  21494376 aagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaatt 21494312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 22886654 - 22886732
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttc 194  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| |||||| |||||| ||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttaccttaggtaatgattaatccaaacttaagcttcactttagctcctaatttc 22886732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 3431208 - 3431132
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||| ||||| ||||| ||||||| ||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttaccttaggttatgatcaatccaaacttgggcttcactttagctcctaatt 3431132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 2545265 - 2545341
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||| | || ||| |||||| ||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaatt 2545341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 13433 - 13208
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13433 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagag 13334  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc 199  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||| ||    
T  13333 aaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcac-cc 13235  T
Q  200 aatccttaattcttcaagttcttctctc 227  Q
    ||| ||| |||| ||||| |||||||||    
T  13234 aat-cttgattcctcaagctcttctctc 13208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15272359 - 15272134
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15272359 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagag 15272260  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc 199  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||| ||    
T  15272259 aaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcac-cc 15272161  T
Q  200 aatccttaattcttcaagttcttctctc 227  Q
    ||| ||| |||| ||||| |||||||||    
T  15272160 aat-cttgattcctcaagctcttctctc 15272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 14951970 - 14952159
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14951970 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 14952069  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| || ||||||||| || ||||   ||||||||| |||||||||    
T  14952070 aaaagaattaactaaatgattatgataaagactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaa 14952159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 15136010 - 15135830
Alignment:
Q  46 attgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaaccaaatgattatcataaagactaacccacttac 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  15136010 attgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttac 15135911  T
Q  145 cttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagttcttctctc 227  Q
    ||| ||| ||||||||||||||||||||||||| ||||||||||||  |||| ||||| ||| |||| ||||| |||||||||    
T  15135910 cttagataaagattaatcccaacttaggcttcactttagctcctaagctcac-ccaat-cttgattcctcaagctcttctctc 15135830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 5682574 - 5682429
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  5682574 aacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagg 5682475  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  5682474 aaaa-aattaactaaatgattatgataaaaactaacccacttacctt 5682429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 25119254 - 25119108
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25119254 aacatattcaaacatatctctaccacataagcacgaattttcaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 25119155  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    ||||||||||||||||||||||| ||||| |||||| | ||||||||    
T  25119154 aaaagaattaaccaaatgattatgataaaaactaactcccttacctt 25119108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 13246737 - 13246842
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  13246737 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 13246836  T
Q  216 agttct 221  Q
    ||||||    
T  13246837 agttct 13246842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 122194 - 122325
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| ||||||||||| || |||||||| ||| ||||||||||||||||||| |||||||||||||| |||  |||||||||| ||| ||||||||    
T  122194 atgattatgataaagactaatccccttaccttagataaagattaatcccaacttagacttcaatttagctcttaagctcactccaat-cttgattcttca 122292  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  122293 agctctccctcttctctctaacccttgttcttc 122325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 15675041 - 15674938
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  15675041 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaattcttgattcttca 15674942  T
Q  216 agtt 219  Q
    ||||    
T  15674941 agtt 15674938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 40885475 - 40885368
Alignment:
Q  132 ctaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc-aatccttaattcttcaagt---tcttctctc 227  Q
    ||||||| |||||||| ||| | ||||||||| ||||||||||||| |||||||||||  |||||||| ||||||| |||||||||||   |||||||||    
T  40885475 ctaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctagattcactccaaatccttgattcttcaagttcctcttctctc 40885376  T
Q  228 taaccctt 235  Q
    ||||||||    
T  40885375 taaccctt 40885368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 10104202 - 10104099
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||| | ||||||||||||  |||||||||| ||| ||||||||    
T  10104202 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctttactttagctcctaagctcactccaattcttgattcttca 10104103  T
Q  216 agtt 219  Q
    ||||    
T  10104102 agtt 10104099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 16609045 - 16608971
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 16608971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 26680517 - 26680591
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 26680591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 55376525 - 55376400
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaa 216  Q
    ||||||| || ||||||||||| |||||||| ||| | ||| || || ||||||||||||||||||||||||||  |||| ||||| |||  ||||||||    
T  55376525 tgattatgatgaagactaacccccttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagctcac-ccaattcttggttcttcaa 55376427  T
Q  217 gttcttctc-tctaacccttgttcttc 242  Q
    ||||| ||| |||||||||| ||||||    
T  55376426 gttctcctcttctaaccctttttcttc 55376400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 19559574 - 19559689
Alignment:
Q  8 tcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaa 107  Q
    ||||||||||  ||||||||| |||| ||||||||||  |||||| ||| ||||||||||||||  |||| || |||||||||||| |||||| ||  ||    
T  19559574 tcaaacatatcactacaacatgagcaggaatttcaaaagttgggtacataataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaa 19559673  T
Q  108 ttaaccaaatgattat 123  Q
    ||||| || |||||||    
T  19559674 ttaactaattgattat 19559689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 33241011 - 33241114
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| ||| | |||||| | |||||||||||||  |||| |||||||  |||||||||| ||| ||||||||    
T  33241011 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcgctttaactcctaagctcactccaattcttgattcttca 33241110  T
Q  216 agtt 219  Q
    ||||    
T  33241111 agtt 33241114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 16327872 - 16327798
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| ||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttaccttatatgaagattaggccaaacctaggcttcaatttagctcctaa 16327798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 219
Target Start/End: Original strand, 31132628 - 31132728
Alignment:
Q  119 attatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt 218  Q
    ||||| || ||||||||||| |||||||| ||| | |||||| | ||||||||||| || ||||||||||||  |||||||||| ||| ||||| |||||    
T  31132628 attatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctccactttagctcctaagctcactccaattcttgattctacaagt 31132727  T
Q  219 t 219  Q
    |    
T  31132728 t 31132728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 32460623 - 32460559
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| ||||||||||||||    
T  32460623 aagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaatt 32460559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 49071895 - 49071994
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  |||||| || |||||||||||||| | |||||||||  || |||||||||||  |||| || |||||||||||| ||||||    
T  49071895 aacatactcaaacatatcactacaatatgagcacgaatttcaacggttgggttcacaatgatcacttattcaaataagcacttatgcatagaaaaagaga 49071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 22738577 - 22738652
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||| || ||||| ||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||||    
T  22738577 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaatt 22738652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 10488879 - 10488953
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||  |||||||| ||||  |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  10488879 atgattaagataaagaccaaccaccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 10488953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34177687 - 34177617
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 71  Q
    |||||| ||||||||||  ||||||||| |||||||||||  |||||||| ||||  ||||||||||||||    
T  34177687 aacatactcaaacatatcactacaacatgagcacgaattttcaagattggattcacaataatcacttattc 34177617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 13048158 - 13048093
Alignment:
Q  125 ataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||||||||| |||| ||| |||||||||||  || ||| |||||||||||||| |||||||    
T  13048158 ataaagactaacccccttaacttagatgaagattagaccaaacctaggcttcaatttaactcctaa 13048093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 8045272 - 8045348
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||| | ||||||| ||||| ||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttaccttaggttatgattaattcaaacttagacttcactttagctcctaatt 8045348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 7132014 - 7131939
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaat 191  Q
    |||||||| ||||  |||||||| |||||||| || |||||||||||| ||||   ||||||||| ||||||||||    
T  7132014 atgattatgataataactaacccccttaccttagaagaagattaatccaaactcttgcttcaattcagctcctaat 7131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 20001030 - 20001104
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  20001030 atgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 20001104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 23269809 - 23269737
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt---tcttctctctaacccttg 236  Q
    ||||||||||||||| |||||||  |  |||||||||||| |||||||||||   |||||||||| |||||||    
T  23269809 cttaggcttcaattttgctcctagctcaactccaatccttgattcttcaagttcctcttctctctgacccttg 23269737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 26339327 - 26339400
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  26339327 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 26339400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 6590 - 6375
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  6590 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataagcacctattatcataatcaattatgcatagaacaagaga 6491  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||| | || |||||||||||||||||||||||||||||||||  ||||||||    
T  6490 aaaagaattaactaaatgattatgataaagactaacccccttaccttagataaggaataatcccaacttaggcttcaatttagctcctaagctcactcca 6391  T
Q  201 atccttaattcttcaag 217  Q
    || ||| ||||||||||    
T  6390 at-cttgattcttcaag 6375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 31 - 242
Target Start/End: Complemental strand, 193514 - 193298
Alignment:
Q  31 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatcataaag 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  193514 gcacgaatttcaatgattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaag 193415  T
Q  131 actaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaag------ttcttct 224  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||||||||       ||||||    
T  193414 actaacccccttaccttaaatgaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttaattcttcaagctctccctcttct 193316  T
Q  225 ctctaacccttgttcttc 242  Q
    ||||||||||||||||||    
T  193315 ctctaacccttgttcttc 193298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 23995131 - 23995356
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23995131 aacatatccaaacatatctctacaacataagcacgaattccaaatattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagag 23995230  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc 199  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||| ||    
T  23995231 aaaaagaattaaccaaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcac-cc 23995329  T
Q  200 aatccttaattcttcaagttcttctctc 227  Q
    ||| ||| |||| ||||| |||||||||    
T  23995330 aat-cttgattcctcaagctcttctctc 23995356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 15742266 - 15742078
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15742266 aacataatcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcat-gaacaagaga 15742168  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||    
T  15742167 aaaagaattaaccaaaggattatgataaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 15742078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26089943 - 26090159
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26089943 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagag 26090042  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcc 199  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||| | | | | | ||||  ||||||||||||| ||||||||||||  |||||||    
T  26090043 aaaaagaattaatcaaatgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggcttcactttagctcctaacctcactcc 26090142  T
Q  200 aatccttaattcttcaag 217  Q
    ||| ||| ||||||||||    
T  26090143 aat-cttgattcttcaag 26090159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 18002543 - 18002353
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||    
T  18002543 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatgcccataatcaattatgcatagaatcaagag 18002444  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| | | | ||||||||  ||||||| ||||| ||||||||||||    
T  18002443 aaaaagaattaaccaaatgattatgataaagactaacccccttaccttaggttatgattaatctaaacttagccttcactttagctcctaa 18002353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 19983339 - 19983193
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983339 aacatattcaaacatatctctacaacataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagaga 19983240  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  19983239 aaaagaattaactaaatgattatgataaaaactaacccccttacctt 19983193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 35015204 - 35015058
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35015204 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 35015105  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  35015104 aaaagaattaactaaatgattatgataaaaactaacccccttacctt 35015058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 4991280 - 4991472
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  4991280 aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataaaatcaagag 4991379  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcc-caacttaggcttcaatttagctcctaat 191  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||| || || ||||| |||  ||||   ||||||||| ||||||||||    
T  4991380 aaaaagaattaaacaaatgattatgataaagactaacccccttacctttgaagatgattattcctaaactcttgcttcaattcagctcctaat 4991472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 18583525 - 18583671
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||    
T  18583525 aacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaatgatgcatagaacaggaga 18583624  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| || || |||||||| ||||||||    
T  18583625 aaaagaattaactaaatgattatgatgaaaactaacccccttacctt 18583671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 23148303 - 23148408
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  23148303 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 23148402  T
Q  216 agttct 221  Q
    ||||||    
T  23148403 agttct 23148408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 23153754 - 23153859
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  23153754 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 23153853  T
Q  216 agttct 221  Q
    ||||||    
T  23153854 agttct 23153859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 27751742 - 27751869
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||||  |||| ||||| ||| ||||||||    
T  27751742 atgattatgatgaagactaacccccttaccttagataaagattaatccaaacttaggcttcaatttagctcctaagctcaccccaattcttgattcttca 27751841  T
Q  216 agttcttctc-tctaacccttgttcttc 242  Q
    |||||| ||| ||||||| || ||||||    
T  27751842 agttctcctcttctaaccatttttcttc 27751869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 22585586 - 22585494
Alignment:
Q  8 tcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||  ||||||||||||||  |||| || |||||||||||| ||||||    
T  22585586 tcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatagaaaaagaga 22585494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 22590417 - 22590325
Alignment:
Q  8 tcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||  ||||||||||||||  |||| || |||||||||||| ||||||    
T  22590417 tcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatagaaaaagaga 22590325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 15004953 - 15004855
Alignment:
Q  2 acatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||  |||||| |||||||  |||| || |||||||||||| ||||||    
T  15004953 acatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcatagaaaaagaga 15004855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 15889753 - 15889631
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  ||||||||| |||||||||||||||| |||||||||  |||||||| |||||  |||| || |||||||||||| ||||||    
T  15889753 aacatactcaaacatatcactacaacatgagcacgaatttcaaaggttgggttcacaataatcacgtattcaaataaacacttatgcatagaaaaagaga 15889654  T
Q  101 aaaagaattaaccaaatgattat 123  Q
     ||  ||||||| || |||||||    
T  15889653 gaagaaattaactaagtgattat 15889631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 29666181 - 29666290
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||||||||  || ||| | ||||||||| ||||||||||||||||||||||||||  |||| |||||  || ||||||||    
T  29666181 atgattatgatgaagactaacccacttatgttagataatgattaatccaaacttaggcttcaatttagctcctaagctcaccccaat--ttgattcttca 29666278  T
Q  216 agttcttctctc 227  Q
    || |||||||||    
T  29666279 agctcttctctc 29666290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25640602 - 25640504
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  ||||||||| |||||||||||||||  |||||||||  ||||||||||||||  |||| || |||||||||||| ||||||    
T  25640602 aacatactcaaacatatc-ctacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagaga 25640504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 1650053 - 1649979
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| ||||||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaa 1649979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 239
Target Start/End: Complemental strand, 35009384 - 35009259
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| ||||| || ||| | ||||||||| ||||| ||||||| |||||||| ||  ||||| ||||| ||| ||||||||    
T  35009384 atgattatgatgaagactaacccccttactttagataatgattaatccaaactttggcttcactttagctcttagattcaccccaattcttgattcttca 35009285  T
Q  216 agttcttc--tctctaacccttgttc 239  Q
    ||||  ||  ||||||||||||||||    
T  35009284 agtttctccttctctaacccttgttc 35009259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 32276691 - 32276615
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| |||||| |||||| ||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaatt 32276615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 16299906 - 16299842
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||||    
T  16299906 aagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaatt 16299842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 18823315 - 18823239
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||||  ||||| ||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaaacttcactttagctcctaatt 18823239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 18839170 - 18839094
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| |||||| |||||| ||||||| ||||||    
T  18839170 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaagcttcactttagcttctaatt 18839094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 14128552 - 14128502
Alignment:
Q  169 taggcttcaatttagctcctaatttcactccaatccttaattcttcaagttc 220  Q
    ||||||||||||||||||||||  |||| |||||||||| ||||||||||||    
T  14128552 taggcttcaatttagctcctaagctcac-ccaatccttagttcttcaagttc 14128502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 18570649 - 18570720
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt---tcttctctctaaccctt 235  Q
    ||||||||||||||| |||||||  |  || ||||||||| |||||||||||   |||||||||||||||||    
T  18570649 cttaggcttcaattttgctcctagctcaaccccaatccttgattcttcaagttcctcttctctctaaccctt 18570720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 12565 - 12319
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||    
T  12565 aacatattcaaacatatctctacaacataagcacaaatttcaaagattgggttcatgataataacttattcccataatcaattatgcatagaacaaaaga 12466  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactcca 200  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||| ||| |||||| |||||||||||| ||||||||||||||||||  ||| ||||    
T  12465 aaaagaattaactaaatgattatgataaaaactaacccccttaccttagataaagattcatcccaacttagacttcaatttagctcctaagctcaatcca 12366  T
Q  201 atccttaattcttcaag------ttcttctctctaacccttgttcttc 242  Q
    || ||| ||||||||||       ||||||||||||||||||||||||    
T  12365 at-cttgattcttcaagctctccctcttctctctaacccttgttcttc 12319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 15861473 - 15861285
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15861473 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 15861374  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctccta 189  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| || || |||||| || ||||   ||||||||| ||||||||    
T  15861373 aaaagaattaaccaaatgattatgataaagactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctccta 15861285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 44035018 - 44034872
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44035018 aacatattcaaacatatatctacaacataaacaagaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 44034919  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  44034918 aaaagaattaactaaatgattatgataaaaactaacccccttacctt 44034872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21860219 - 21860365
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21860219 aacatattcaaacatatctctaccacataagtacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 21860318  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  21860319 aaaagaattaaccaaatgattatgataaaaactaacccccttacctt 21860365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 37844406 - 37844277
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  37844406 atgattatgataaagactaacccccttaccttagataaaaattaatcccaacttaggcttcaatttagctcctaagctcactccaatccttagttcttca 37844307  T
Q  216 agtt---cttctctctaacccttgttcttc 242  Q
    ||||   |||||||| ||||||| ||||||    
T  37844306 agttctccttctctcaaacccttattcttc 37844277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 20445987 - 20446092
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||| |||||||  ||||||||||||||| |||||||    
T  20445987 atgattatgataaagactaactcccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctcactccaatccttagttcttca 20446086  T
Q  216 agttct 221  Q
    ||||||    
T  20446087 agttct 20446092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22367226 - 22367296
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 71  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22367226 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 22367296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 20893583 - 20893478
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  20893583 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttca 20893484  T
Q  216 agttct 221  Q
    ||||||    
T  20893483 agttct 20893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 20531751 - 20531856
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||    |||||||| ||| |||||||||||||||||||||||||||||| |||||||  ||||||||||||||| |||||||    
T  20531751 atgattatgataaagactaatttccttaccttagataaagattaatcccaacttaggcttcaatttatctcctaagctcactccaatccttagttcttca 20531850  T
Q  216 agttct 221  Q
    ||||||    
T  20531851 agttct 20531856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 20913335 - 20913466
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||  |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  20913335 atgattacgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 20913433  T
Q  216 agt------tcttctctctaacccttgttcttc 242  Q
    | |      ||||||||||||||||||||||||    
T  20913434 atttctccctcttctctctaacccttgttcttc 20913466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 41218667 - 41218759
Alignment:
Q  55 atgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || || || |||||||| ||||||||    
T  41218667 atgagaatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgatcatgatgaaaactaacccccttacctt 41218759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 20931650 - 20931781
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||| ||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||| ||||  |||||||||| ||| ||| ||||    
T  20931650 atgattatgataaaggctaacccccttaccttagataaagattaatcccaacttaggcttcactttagctgctaagctcactccaat-cttgattattca 20931748  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  20931749 agctctccctcttctctctaacccttgttcttc 20931781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 45051726 - 45051800
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||  || ||| ||||||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaa 45051800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 51452809 - 51452883
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||  |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 51452883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 7640882 - 7640809
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||| ||||  |||||||| |||||||| || ||||||||| || ||||   |||||||||||||||||||    
T  7640882 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaa 7640809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 80072 - 80218
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  80072 aacatattcaaacatatctctaccacataagcacaaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 80171  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||    
T  80172 aaaagaattaactaaatgattatgataaagactaacccccttacctt 80218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 119; Significance: 6e-61; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 4494 - 4304
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagag 99  Q
    |||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||    
T  4494 aacatatttaaacatatctctacaacataagcactaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaatgaagag 4395  T
Q  100 aaaaagaattaaccaaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||| | | | ||||||||| |||||  |||||| ||||||||||||    
T  4394 aaaaagaattaaccaaatgattatgataaagtctaacccccttaccttaggtaatgattaatccaaacttttgcttcactttagctcctaa 4304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 75 - 5
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 71  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  75 aacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 6130 - 5984
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6130 aacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 6031  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| | |||||||| || || |||||||| ||||||||    
T  6030 aaaagaattaactatatgattatgatgaaaactaacccccttacctt 5984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 5923 - 5778
Alignment:
Q  2 acatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 101  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5923 acatattcaaacacatctctacaacagaagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 5824  T
Q  102 aaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    ||||||||||| | |||||||| || || |||||||| ||||||||    
T  5823 aaagaattaactatatgattatgatgaaaactaacccccttacctt 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 31327 - 31181
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31327 aacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 31228  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    ||| |||||||| |||||||| | ||||| |||||||| ||||||||    
T  31227 aaatgaattaactaaatgattgtgataaaaactaacccccttacctt 31181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 41517 - 41663
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41517 aacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 41616  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    ||| |||||||| |||||||| | ||||| |||||||| ||||||||    
T  41617 aaatgaattaactaaatgattgtgataaaaactaacccccttacctt 41663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 37012 - 36938
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 36938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 162225 - 162079
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  162225 aacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 162126  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| | |||||||| || || |||||||| ||||||||    
T  162125 aaaagaattaactagatgattatgatgaaaactaacccccttacctt 162079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 166311 - 166165
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  166311 aacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 166212  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| | |||||||| || || |||||||| ||||||||    
T  166211 aaaagaattaactagatgattatgatgaaaactaacccccttacctt 166165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 42568 - 42708
Alignment:
Q  7 ttcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 106  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42568 ttcaaccatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 42667  T
Q  107 attaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||| |||||||||| ||||| |||||||| ||||||||    
T  42668 attaactaaatgattatgataaaaactaacccccttacctt 42708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 239
Target Start/End: Original strand, 13824 - 13949
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| |||| || |||  ||||| ||||| ||||||||||||    
T  13824 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttatcttctagattcaccccaattcttaattcttca 13923  T
Q  216 ag-ttcttc-tctctaacccttgttc 239  Q
    || |||| | ||||||||||||||||    
T  13924 agtttctgcttctctaacccttgttc 13949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 130772 - 130911
Alignment:
Q  9 caaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaa 107  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  130772 caaacatatctctacaacatgagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaa 130871  T
Q  108 ttaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||| ||||||||||| |||||||||||||| ||||||||    
T  130872 ttaatcaaatgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 89398 - 89284
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagttcttc-tct 226  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||||||  |||||||||| ||| |||||||||||||| | |||    
T  89398 aagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctcactccaattcttgattcttcaagttctccttct 89299  T
Q  227 ctaacccttgttcttc 242  Q
    | ||||||||||||||    
T  89298 c-aacccttgttcttc 89284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 107728 - 107635
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagttct 221  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||||||  |||||||||| ||| ||||||||||||||    
T  107728 aagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctcactccaattcttgattcttcaagttct 107635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 30302 - 30448
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30302 aacatattcaaacatatctctacaacataagcatgaatttcaaagatagggttcatgataatcacttattcccataatcaattatgcatagaacaagaga 30401  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||| ||||||| |||||||||| || || | |||||| ||||||||    
T  30402 aaaataattaactaaatgattatgatgaaaaataacccccttacctt 30448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 498 - 353
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  498 aacatattcaaatatatctctacaacataagcacaaatttcaaatattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag- 400  T
Q  101 aaaagaattaaccaaatgattatcataaagactaacccacttacctt 147  Q
    |||||||||||| | |||||||| ||||||| ||||||  |||||||    
T  399 aaaagaattaactagatgattatgataaagaataaccccgttacctt 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 99; Significance: 5e-49; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 26372 - 26246
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  26372 atgattatgataaagactaacccccttaccttagatgaagattaatcccatcttaggcttcaatttagctcctaagctcactccaatccttaattcttca 26273  T
Q  216 agttcttctctctaacccttgttcttc 242  Q
    |||||||||||||||||||| ||||||    
T  26272 agttcttctctctaaccctttttcttc 26246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 8125 - 7996
Alignment:
Q  116 atgattatcataaagactaacccac-ttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttc 214  Q
    |||||||| || ||||||||||| | ||||||| ||| | ||||||||| ||||||||||||| |||||||||||  |||||  |||| ||| |||||||    
T  8125 atgattatgatgaagactaaccccccttaccttagataatgattaatccaaacttaggcttcattttagctcctagattcacctcaattcttgattcttc 8026  T
Q  215 aagttcttc--tctctaacccttgttcttc 242  Q
    |||||  ||  |||| ||||||||||||||    
T  8025 aagtttctccttctccaacccttgttcttc 7996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 12063 - 12137
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| || ||||||||||| |||| ||| ||| | ||||||||| ||||| ||||||||||||||||||||    
T  12063 atgattatgatgaagactaacccccttatcttagataatgattaatccaaactttggcttcaatttagctcctaa 12137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 15238 - 15323
Alignment:
Q  157 ttaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagttcttctctctaacccttgttcttc 242  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15238 ttaatcccaacttaggcttcaatttagctcctaagttcactccaatccttaattcttcaagttcttctctctaacctttgttcttc 15323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15157 - 15236
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatca 80  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15157 aacatattcaaacatatctctacgacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatca 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 914 - 840
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| || ||||||||| |||||||   | ||||||| |||||||||    
T  914 atgattatgataaagactaacccccttaccttagaagaagattaaccccaactcttgattcaattcagctcctaa 840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 51140 - 51011
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| ||||||||||| |  |||||||  ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  51140 atgattatgataaagactaatctccttacctaagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatccttagttcttca 51041  T
Q  216 agtt---cttctctctaacccttgttcttc 242  Q
    ||||   |||||||||||||||||||||||    
T  51040 agttctccttctctctaacccttgttcttc 51011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 146906 - 147037
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  146906 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaat-cttgattcttca 147004  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  147005 agctctccctcttctctctaacccttgttcttc 147037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 9160 - 9263
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||| |||||||||| ||| | |||||| | |||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  9160 atgattatgatgaagactaacacacttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaattcttgattcttca 9259  T
Q  216 agtt 219  Q
    ||||    
T  9260 agtt 9263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 42034 - 42163
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||| ||||| |||||||| ||| || |||||||||||||||| |||||||||| |||||||  ||| ||||||||||| |||||||    
T  42034 atgattatgataaagaccaacccccttaccttagataaatattaatcccaacttagacttcaatttacctcctaagctcagtccaatccttagttcttca 42133  T
Q  216 agtt---cttctctctaacccttgttcttc 242  Q
    ||||   |||||||||||||||||||||||    
T  42134 agttctccttctctctaacccttgttcttc 42163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 9183 - 9314
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  9183 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 9281  T
Q  216 agttc------ttctctctaacccttgttcttc 242  Q
    || ||      ||||||||||||||||||||||    
T  9282 agctctccctattctctctaacccttgttcttc 9314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 172210 - 172341
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  172210 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 172308  T
Q  216 agttc------ttctctctaacccttgttcttc 242  Q
    || ||      ||||||||||||||||||||||    
T  172309 agctctcccttttctctctaacccttgttcttc 172341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 177913 - 178044
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  177913 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 178011  T
Q  216 agttc------ttctctctaacccttgttcttc 242  Q
    || ||      ||||||||||||||||||||||    
T  178012 agctctcccttttctctctaacccttgttcttc 178044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 123107 - 123011
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagttcttct 224  Q
    ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| |||||||||||||||||    
T  123107 aagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaattcttgattcttcaagttcttct 123011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 1430 - 1561
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  1430 atgattatgataaagactaacccccttaccttagataaagattaatcacaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 1528  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  1529 agctctccctcttctctctaacccttgttcttc 1561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 3540 - 3440
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| | |||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||  |||||||||| ||| ||||||||    
T  3540 atgattatgacaaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat-cttgattcttca 3442  T
Q  216 ag 217  Q
    ||    
T  3441 ag 3440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 128127 - 128027
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||| |||||||| |||||||||| ||| ||||||||    
T  128127 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcattttatctcctaatctcactccaat-cttgattcttca 128029  T
Q  216 ag 217  Q
    ||    
T  128028 ag 128027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 247398 - 247324
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  247398 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 247324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 34107 - 34033
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| || ||||||||||| |||||||| |||||||||||| || ||||   |||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaa 34033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 12418 - 12550
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| |||  |||||||||| ||||||||||||| ||||||||||||  ||||||||||  || ||||||||    
T  12418 atgattatgataaagactaacccccttaccttagatagagattaatcctaacttaggcttcactttagctcctaagctcactccaatttttgattcttca 12517  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  12518 agctctccctcttctctctaacccttgttcttc 12550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 272330 - 272461
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||| |  |||||||||| ||| |||||| |    
T  272330 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctgagctcactccaat-cttgattcttta 272428  T
Q  216 ag------ttcttctctctaacccttgttcttc 242  Q
    ||       ||||||||||||||||||||||||    
T  272429 agctctccctcttctctctaacccttgttcttc 272461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 339 - 465
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaa 216  Q
    ||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||||||||||||||||   ||| ||||| ||| |||||||||    
T  339 tgattatgatgaagactaacccccttaccttagataaggattaatccaaacttaggcttcaatttagctcctaagaccaccccaattcttgattcttcaa 438  T
Q  217 gttcttctc-tctaacccttgttcttc 242  Q
    |||||  || |||||||||| ||||||    
T  439 gttctcatcttctaaccctttttcttc 465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 44161 - 44039
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 100  Q
    |||||| ||||||||||  ||||||||| ||||||||||||||||||| ||||||  ||||||||||||||  ||||||| |||||||||| | ||||||    
T  44161 aacatactcaaacatatcactacaacatgagcacgaatttcaaagattaggttcacaataatcacttattcaaataatcacttatgcatagcaaaagaga 44062  T
Q  101 aaaagaattaaccaaatgattat 123  Q
     ||  ||||||| || |||||||    
T  44061 gaagaaattaactaagtgattat 44039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 57427 - 57315
Alignment:
Q  113 caaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattct 212  Q
    ||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||| ||||  |||| ||||| ||| ||||     
T  57427 caaatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctactaagctcac-ccaat-cttgattcc 57330  T
Q  213 tcaagttcttctctc 227  Q
    ||||| |||||||||    
T  57329 tcaagctcttctctc 57315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 36869 - 36735
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttca---atttagctcctaatttcactccaatccttaattct 212  Q
    |||||||| |||||||||||||| ||||||||  || |||||||||||||||||||||||||    ||||||||||||  |||||||||| ||| |||||    
T  36869 atgattatgataaagactaacccccttaccttaaataaagattaatcccaacttaggcttcacttctttagctcctaagctcactccaat-cttgattct 36771  T
Q  213 tcaag------ttcttctctctaacccttgttcttc 242  Q
    |||||       ||||||||||||||||||||||||    
T  36770 tcaagctctccctcttctctctaacccttgttcttc 36735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 25532 - 25650
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttcaa 216  Q
    ||||||| || ||||||||||| |||||||| ||| | |||||| || ||||||||||||||||||||||||||  |||| | ||| ||| |||||||||    
T  25532 tgattatgatgaagactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaagctcac-ctaattcttgattcttcaa 25630  T
Q  217 gttcttctc-tctaaccctt 235  Q
    ||||| ||| ||||||||||    
T  25631 gttctcctcttctaaccctt 25650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 22857 - 22931
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 22931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 27112 - 27186
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 27186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 1528 - 1454
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 1454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 34340 - 34264
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| ||||||||||||||    
T  34340 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcattttagctcctaatt 34264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 314 - 384
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 71  Q
    |||||| ||||||||||  ||||||||| |||| |||||||||||||||||||||  ||||||||||||||    
T  314 aacatactcaaacatatcactacaacatgagcaagaatttcaaagattgggttcacaataatcacttattc 384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 5846 - 5920
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||  || ||| ||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 5920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1548 - 1478
Alignment:
Q  1 aacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 71  Q
    |||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||  ||||||| ||||||    
T  1548 aacatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcatttattc 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 18026 - 18102
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||||||| |||| |||||||||    
T  18026 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttaactcctaatt 18102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 41965 - 42041
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||||    
T  41965 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaatt 42041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 56045 - 55936
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| || ||||||||||| || ||| | ||| | ||||||||| ||||||||||| |||||| ||||||| ||||| |||||  || ||||||||    
T  56045 atgattatgatgaagactaaccccctgaccgtagataatgattaatccaaacttaggctttaatttatctcctaagttcaccccaat--ttgattcttca 55948  T
Q  216 agttcttctctc 227  Q
    || |||||||||    
T  55947 agctcttctctc 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3888 - 3785
Alignment:
Q  1 aacatattcaaacatatat----ctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaa 96  Q
    |||||| ||||||||||||    ||||||||| |||||||||||||||  |||| ||||  ||||||||||||||  |||| || |||||||||||| ||    
T  3888 aacatactcaaacatatatatcactacaacatgagcacgaatttcaaaagttggtttcacaataatcacttattcaaataagcacttatgcatagaaaaa 3789  T
Q  97 gaga 100  Q
    ||||    
T  3788 gaga 3785  T

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Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 45338 - 45412
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||| || ||||||||||| |||||||| ||| | | ||||||| |||||||||||||||| |||||||||    
T  45338 atgattatgatgaagactaacccccttaccttagataatggttaatccaaacttaggcttcaattaagctcctaa 45412  T

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Target: scaffold0413 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 6024 - 5948
Alignment:
Q  114 aaatgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    |||||||||| |||||||||||||| |||||||| |||  |||||||||| ||||   ||||||||| |||||||||    
T  6024 aaatgattatgataaagactaacccccttaccttagatagagattaatcctaactcttgcttcaattcagctcctaa 5948  T

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Target: scaffold0173 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 5549 - 5625
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| ||||| ||||||| ||||||||||||||    
T  5549 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttgggcttcattttagctcctaatt 5625  T

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Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 49772 - 49708
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||||||| |||||||| | | | ||||||||| ||||||||||||| ||||||||||||||    
T  49772 aagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaatt 49708  T

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Target: scaffold0816 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 2942 - 2872
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt--tcttctctctaaccctt 235  Q
    ||||||||||||||| |||||||  || || ||||||||| |||||||||||  |||||||||||||||||    
T  2942 cttaggcttcaattttgctcctagcttaaccccaatccttgattcttcaagtcatcttctctctaaccctt 2872  T

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Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 5508 - 5433
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaat 191  Q
    |||||||| || ||||||||||| |||||||| | | | ||||||||| | ||||||||||| |||||||||||||    
T  5508 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaatcttaggcttcactttagctcctaat 5433  T

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Target: scaffold0467 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 10276 - 10218
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctc 186  Q
    ||||| ||||| |||||||| ||||| |||||| |||||||||||||||| ||||||||    
T  10276 aagacaaacccccttaccttagatgatgattaaccccaacttaggcttcactttagctc 10218  T

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Target: scaffold0215 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 9282 - 9221
Alignment:
Q  131 actaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||||    
T  9282 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaatt 9221  T

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Target: scaffold0215; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 16180 - 16119
Alignment:
Q  131 actaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    |||||||| |||||||| ||||| | ||||||  ||||||||||||| ||||||||||||||    
T  16180 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaatt 16119  T

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Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 34034 - 34105
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagttc---ttctctctaaccctt 235  Q
    |||||||||||||||||||||||  ||  | ||||||||| |||||||||||||   |||||||||||||||    
T  34034 cttaggcttcaatttagctcctagctttcccccaatccttgattcttcaagttccttttctctctaaccctt 34105  T

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Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 48903 - 49034
Alignment:
Q  116 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatttcactccaatccttaattcttca 215  Q
    |||||||| |||||||||||||| |||||||| | | | | | ||||  ||||||||||| | ||||||||||||  |||||||||| ||| ||||||||    
T  48903 atgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggctttactttagctcctaagctcactccaat-cttgattcttca 49001  T
Q  216 a------gttcttctctctaacccttgttcttc 242  Q
    |        ||||||||||||||||||||||||    
T  49002 atctctccctcttctctctaacccttgttcttc 49034  T

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Target: scaffold0554 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 2287 - 2357
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt---tcttctctctaaccct 234  Q
    ||||||||||||||||||||||| ||   | ||||||||| |||||||||||   ||||||||||||||||    
T  2287 cttaggcttcaatttagctcctagttctcccccaatccttgattcttcaagttcctcttctctctaaccct 2357  T

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Target: scaffold0516 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 12075 - 12000
Alignment:
Q  117 tgattatcataaagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaatt 192  Q
    ||||||| ||||  |||||||| |||||||| ||||| | |||||   ||||||||||||| ||||||||||||||    
T  12075 tgattatgataataactaacccccttaccttagatgatgtttaattttaacttaggcttcactttagctcctaatt 12000  T

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Target: scaffold0361 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 3528 - 3579
Alignment:
Q  140 cttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaat 191  Q
    |||||||| ||||| ||||||| | ||||||||||||| |||||||||||||    
T  3528 cttaccttagatgatgattaattcaaacttaggcttcactttagctcctaat 3579  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 95310 - 95372
Alignment:
Q  128 aagactaacccacttaccttggatgaagattaatcccaacttaggcttcaatttagctcctaa 190  Q
    ||||||||||| |||||||| | | | ||||||||| ||| ||||||||| ||||||||||||    
T  95310 aagactaacccccttaccttaggtaatgattaatccaaacctaggcttcactttagctcctaa 95372  T

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Target: scaffold0359 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 11529 - 11465
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt--tcttctctcta 229  Q
    ||||||||||||||| |||||||  || || ||||||||| |||||||||||  |||||||||||    
T  11529 cttaggcttcaattttgctcctagcttaaccccaatccttgattcttcaagtcctcttctctcta 11465  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 12061 - 12132
Alignment:
Q  167 cttaggcttcaatttagctcctaatttcactccaatccttaattcttcaagt---tcttctctctaaccctt 235  Q
    |||||||||||||||| ||||||  |   ||||||||||| |||||||||||   |||||||||||||||||    
T  12061 cttaggcttcaatttaactcctagctcttctccaatccttgattcttcaagttcctcttctctctaaccctt 12132  T

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Target: scaffold0120 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 21882 - 21954
Alignment:
Q  167 cttaggcttcaatttagctccta-atttcactccaatccttaattcttcaagtt----cttctctctaaccctt 235  Q
    ||||||||||||||| ||||||| ||||| | ||||||||| ||||||||||||    ||||||||||||||||    
T  21882 cttaggcttcaattttgctcctagatttc-ccccaatccttgattcttcaagttatcccttctctctaaccctt 21954  T

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