View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7946_low_6 (Length: 240)

Name: NF7946_low_6
Description: NF7946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7946_low_6
NF7946_low_6
[»] chr3 (47 HSPs)
chr3 (18-240)||(9832328-9832550)
chr3 (26-73)||(10499140-10499187)
chr3 (30-72)||(8051213-8051255)
chr3 (26-74)||(26871535-26871583)
chr3 (25-73)||(31520635-31520683)
chr3 (25-71)||(16991542-16991588)
chr3 (27-71)||(3054994-3055038)
chr3 (25-73)||(27093391-27093439)
chr3 (25-73)||(40268487-40268535)
chr3 (25-69)||(42799777-42799821)
chr3 (25-64)||(2667869-2667908)
chr3 (25-72)||(36720380-36720427)
chr3 (25-72)||(46518627-46518674)
chr3 (25-71)||(4222141-4222187)
chr3 (25-71)||(16354922-16354968)
chr3 (37-71)||(24459990-24460024)
chr3 (25-71)||(27923073-27923119)
chr3 (25-71)||(31789000-31789046)
chr3 (30-71)||(14186648-14186689)
chr3 (35-71)||(1360921-1360957)
chr3 (25-73)||(5499437-5499485)
chr3 (37-73)||(26988994-26989030)
chr3 (82-158)||(42747700-42747776)
chr3 (25-71)||(10445169-10445216)
chr3 (32-71)||(11092206-11092245)
chr3 (25-64)||(17554778-17554817)
chr3 (25-72)||(18319198-18319245)
chr3 (25-72)||(30311305-30311352)
chr3 (25-60)||(32651468-32651503)
chr3 (25-71)||(203090-203136)
chr3 (25-63)||(12761520-12761558)
chr3 (25-71)||(14339610-14339656)
chr3 (25-71)||(21960551-21960597)
chr3 (25-71)||(26481927-26481973)
chr3 (26-68)||(30510230-30510272)
chr3 (25-71)||(47810774-47810820)
chr3 (25-71)||(51903908-51903954)
chr3 (25-71)||(53863897-53863943)
chr3 (25-71)||(53956384-53956430)
chr3 (83-156)||(584123-584196)
chr3 (27-68)||(15034348-15034389)
chr3 (25-70)||(18316528-18316573)
chr3 (82-158)||(30573833-30573909)
chr3 (26-71)||(31510749-31510794)
chr3 (39-71)||(2597264-2597296)
chr3 (25-73)||(32638943-32638991)
chr3 (35-71)||(47079701-47079737)
[»] chr8 (36 HSPs)
chr8 (25-78)||(16852333-16852386)
chr8 (25-71)||(968362-968408)
chr8 (25-71)||(18540298-18540344)
chr8 (25-69)||(2203494-2203538)
chr8 (25-69)||(3624582-3624626)
chr8 (25-72)||(8484998-8485045)
chr8 (25-72)||(19703517-19703564)
chr8 (25-72)||(22268963-22269010)
chr8 (28-71)||(23874415-23874458)
chr8 (25-72)||(28783059-28783106)
chr8 (25-71)||(6530807-6530853)
chr8 (25-71)||(20994488-20994534)
chr8 (25-71)||(26688865-26688911)
chr8 (25-71)||(29431011-29431057)
chr8 (25-70)||(29858079-29858124)
chr8 (28-72)||(5264543-5264587)
chr8 (25-72)||(44780144-44780191)
chr8 (25-71)||(6436585-6436631)
chr8 (25-75)||(12988424-12988474)
chr8 (25-71)||(40591732-40591778)
chr8 (26-71)||(32157191-32157236)
chr8 (26-71)||(34986102-34986147)
chr8 (25-72)||(4830486-4830533)
chr8 (25-72)||(5801046-5801093)
chr8 (38-72)||(3826820-3826854)
chr8 (25-71)||(6569801-6569847)
chr8 (25-71)||(23361679-23361725)
chr8 (30-72)||(27121009-27121051)
chr8 (25-71)||(30483914-30483960)
chr8 (82-158)||(6526170-6526247)
chr8 (39-72)||(45527567-45527600)
chr8 (83-154)||(10939451-10939523)
chr8 (32-72)||(18897165-18897205)
chr8 (32-72)||(28566104-28566144)
chr8 (32-72)||(28573727-28573767)
chr8 (37-73)||(36042979-36043015)
[»] chr5 (29 HSPs)
chr5 (26-71)||(21589288-21589333)
chr5 (25-71)||(21549167-21549213)
chr5 (24-71)||(7918498-7918545)
chr5 (25-72)||(30109338-30109385)
chr5 (25-72)||(30883228-30883275)
chr5 (25-71)||(16457810-16457856)
chr5 (25-72)||(34984805-34984852)
chr5 (25-71)||(8278305-8278351)
chr5 (101-158)||(14331460-14331518)
chr5 (25-71)||(16773807-16773853)
chr5 (25-71)||(25627057-25627103)
chr5 (26-72)||(26078082-26078128)
chr5 (25-71)||(29075781-29075827)
chr5 (32-71)||(892511-892550)
chr5 (24-71)||(3252318-3252365)
chr5 (24-71)||(5390879-5390926)
chr5 (25-72)||(14285160-14285207)
chr5 (25-72)||(22737081-22737128)
chr5 (25-72)||(26598523-26598570)
chr5 (25-72)||(29692416-29692463)
chr5 (25-71)||(14495835-14495881)
chr5 (34-72)||(16436617-16436655)
chr5 (25-71)||(19373239-19373285)
chr5 (25-74)||(22020892-22020941)
chr5 (26-71)||(31669055-31669100)
chr5 (114-155)||(31723913-31723954)
chr5 (31-71)||(3915034-3915074)
chr5 (114-158)||(26004915-26004959)
chr5 (39-71)||(32670671-32670703)
[»] chr4 (42 HSPs)
chr4 (25-74)||(37720244-37720293)
chr4 (26-71)||(55427231-55427276)
chr4 (25-72)||(51250552-51250599)
chr4 (25-71)||(19238607-19238653)
chr4 (25-71)||(37109381-37109427)
chr4 (25-73)||(29195093-29195141)
chr4 (25-72)||(27965540-27965587)
chr4 (25-71)||(9241055-9241101)
chr4 (25-77)||(46545705-46545757)
chr4 (25-71)||(1730519-1730565)
chr4 (25-71)||(37443702-37443748)
chr4 (23-72)||(24827824-24827873)
chr4 (25-74)||(40284016-40284065)
chr4 (25-68)||(7292828-7292871)
chr4 (25-72)||(7949484-7949531)
chr4 (25-72)||(19680818-19680865)
chr4 (25-72)||(21344816-21344863)
chr4 (25-71)||(37274489-37274536)
chr4 (32-71)||(37455569-37455608)
chr4 (25-68)||(39030143-39030186)
chr4 (32-71)||(42281270-42281309)
chr4 (25-64)||(49576924-49576963)
chr4 (25-71)||(13496241-13496287)
chr4 (25-67)||(13901746-13901788)
chr4 (25-71)||(15180741-15180787)
chr4 (25-71)||(17618281-17618327)
chr4 (25-67)||(24234649-24234691)
chr4 (25-71)||(28635696-28635742)
chr4 (25-71)||(31759688-31759734)
chr4 (25-67)||(37980177-37980219)
chr4 (25-71)||(38206155-38206201)
chr4 (25-71)||(56409951-56409997)
chr4 (25-71)||(2622425-2622475)
chr4 (27-72)||(6606057-6606102)
chr4 (131-160)||(17975253-17975282)
chr4 (34-71)||(19229246-19229283)
chr4 (26-71)||(47044717-47044762)
chr4 (25-72)||(2185062-2185110)
chr4 (82-157)||(25717668-25717744)
chr4 (83-158)||(28615411-28615486)
chr4 (27-71)||(33619206-33619250)
chr4 (132-160)||(49940083-49940111)
[»] chr7 (49 HSPs)
chr7 (25-73)||(41487360-41487408)
chr7 (25-72)||(30579334-30579381)
chr7 (25-71)||(25021365-25021411)
chr7 (25-71)||(26459440-26459486)
chr7 (25-71)||(42836031-42836077)
chr7 (26-71)||(39631844-39631889)
chr7 (23-71)||(22932739-22932787)
chr7 (25-68)||(15905703-15905746)
chr7 (25-71)||(7801180-7801226)
chr7 (25-71)||(22760863-22760909)
chr7 (25-71)||(23301632-23301678)
chr7 (25-71)||(39499749-39499795)
chr7 (25-71)||(43590907-43590953)
chr7 (25-71)||(48771938-48771984)
chr7 (26-71)||(30442488-30442533)
chr7 (28-72)||(11720993-11721037)
chr7 (25-73)||(43215182-43215230)
chr7 (25-72)||(2446307-2446354)
chr7 (32-71)||(5273627-5273666)
chr7 (25-72)||(23552117-23552164)
chr7 (25-68)||(45976953-45976996)
chr7 (25-71)||(5579264-5579310)
chr7 (25-71)||(19553454-19553499)
chr7 (25-71)||(25956322-25956368)
chr7 (25-71)||(45559200-45559246)
chr7 (25-71)||(48125204-48125250)
chr7 (32-73)||(35328911-35328952)
chr7 (90-157)||(1418502-1418570)
chr7 (25-69)||(21854550-21854594)
chr7 (31-71)||(26199509-26199549)
chr7 (32-72)||(38374636-38374676)
chr7 (27-75)||(43663127-43663175)
chr7 (36-71)||(6426093-6426128)
chr7 (25-68)||(20952179-20952222)
chr7 (103-158)||(25596129-25596184)
chr7 (36-71)||(31835192-31835227)
chr7 (33-71)||(3280523-3280561)
chr7 (25-71)||(20335861-20335907)
chr7 (25-71)||(24513797-24513843)
chr7 (25-71)||(25590611-25590657)
chr7 (25-71)||(27776172-27776218)
chr7 (25-71)||(33869475-33869521)
chr7 (37-74)||(22702237-22702274)
chr7 (38-71)||(48039690-48039723)
chr7 (35-71)||(4161288-4161324)
chr7 (35-71)||(15137553-15137589)
chr7 (82-157)||(23214930-23215006)
chr7 (128-156)||(36890993-36891021)
chr7 (25-69)||(44628213-44628257)
[»] chr6 (22 HSPs)
chr6 (25-73)||(33549102-33549150)
chr6 (25-72)||(12188333-12188380)
chr6 (25-72)||(12234537-12234584)
chr6 (25-72)||(31623021-31623068)
chr6 (25-71)||(21418470-21418516)
chr6 (25-72)||(10338204-10338251)
chr6 (25-68)||(13441053-13441096)
chr6 (29-67)||(6776641-6776679)
chr6 (25-71)||(14557962-14558008)
chr6 (25-71)||(30127400-30127446)
chr6 (25-73)||(22701-22749)
chr6 (23-71)||(14278139-14278186)
chr6 (25-69)||(32613170-32613214)
chr6 (32-71)||(28028530-28028569)
chr6 (88-158)||(30536883-30536954)
chr6 (25-71)||(24641220-24641266)
chr6 (26-71)||(1056716-1056761)
chr6 (25-70)||(6758452-6758497)
chr6 (114-155)||(12111075-12111116)
chr6 (32-65)||(34444809-34444842)
chr6 (26-62)||(11597904-11597940)
chr6 (26-74)||(24507567-24507615)
[»] chr2 (37 HSPs)
chr2 (25-72)||(37480074-37480121)
chr2 (25-72)||(42602553-42602600)
chr2 (25-71)||(42327425-42327471)
chr2 (25-74)||(7799065-7799114)
chr2 (25-72)||(29503270-29503317)
chr2 (25-72)||(39714991-39715038)
chr2 (25-71)||(23052553-23052599)
chr2 (28-70)||(37756004-37756046)
chr2 (25-71)||(42922414-42922460)
chr2 (25-73)||(25931004-25931052)
chr2 (25-72)||(1729815-1729862)
chr2 (25-72)||(21213768-21213815)
chr2 (25-72)||(29197406-29197453)
chr2 (25-71)||(342395-342441)
chr2 (82-155)||(28803451-28803525)
chr2 (25-71)||(32106566-32106612)
chr2 (81-158)||(2142729-2142806)
chr2 (27-72)||(3697431-3697476)
chr2 (25-70)||(16918608-16918653)
chr2 (26-71)||(40416421-40416466)
chr2 (25-69)||(12086159-12086203)
chr2 (82-158)||(27317455-27317531)
chr2 (83-158)||(28677577-28677653)
chr2 (25-72)||(19322767-19322814)
chr2 (25-68)||(30359657-30359700)
chr2 (25-71)||(11062360-11062406)
chr2 (116-158)||(15370241-15370283)
chr2 (25-71)||(16381684-16381730)
chr2 (25-71)||(16525178-16525224)
chr2 (25-71)||(18825341-18825387)
chr2 (25-71)||(19016031-19016077)
chr2 (25-67)||(24191842-24191884)
chr2 (25-71)||(26482093-26482139)
chr2 (131-160)||(3078524-3078553)
chr2 (31-72)||(30808683-30808724)
chr2 (82-157)||(22878173-22878249)
chr2 (31-71)||(24144676-24144716)
[»] chr1 (39 HSPs)
chr1 (25-72)||(40257398-40257445)
chr1 (25-71)||(9165225-9165271)
chr1 (25-72)||(36371469-36371516)
chr1 (25-76)||(41508826-41508877)
chr1 (25-71)||(15581171-15581217)
chr1 (25-71)||(16170008-16170054)
chr1 (25-71)||(31794294-31794340)
chr1 (25-71)||(52116811-52116857)
chr1 (25-70)||(44126396-44126441)
chr1 (35-71)||(19528367-19528403)
chr1 (25-73)||(37046983-37047031)
chr1 (25-72)||(4566547-4566594)
chr1 (25-76)||(51013156-51013207)
chr1 (25-71)||(952511-952557)
chr1 (25-71)||(21694446-21694492)
chr1 (25-71)||(24857860-24857906)
chr1 (26-71)||(1690108-1690153)
chr1 (27-72)||(21547512-21547557)
chr1 (26-71)||(37310007-37310052)
chr1 (31-67)||(17745292-17745328)
chr1 (25-69)||(33700803-33700847)
chr1 (25-73)||(34228872-34228920)
chr1 (25-73)||(39012289-39012337)
chr1 (95-157)||(6292580-6292643)
chr1 (25-72)||(8177212-8177259)
chr1 (25-72)||(45235409-45235456)
chr1 (25-71)||(50901581-50901628)
chr1 (27-65)||(48400178-48400216)
chr1 (101-157)||(7217993-7218050)
chr1 (26-71)||(10526823-10526868)
chr1 (131-160)||(11695987-11696016)
chr1 (28-61)||(28022158-28022191)
chr1 (25-74)||(29817672-29817721)
chr1 (26-71)||(30689012-30689057)
chr1 (25-74)||(51814491-51814540)
chr1 (31-71)||(2219972-2220012)
chr1 (25-73)||(26232416-26232464)
chr1 (114-158)||(37241739-37241782)
chr1 (31-71)||(37400274-37400314)
[»] scaffold0258 (1 HSPs)
scaffold0258 (25-71)||(15353-15399)
[»] scaffold0417 (1 HSPs)
scaffold0417 (23-72)||(10218-10267)
[»] scaffold0002 (1 HSPs)
scaffold0002 (25-68)||(95001-95044)
[»] scaffold0070 (1 HSPs)
scaffold0070 (26-68)||(38933-38975)
[»] scaffold0032 (1 HSPs)
scaffold0032 (25-71)||(112282-112328)
[»] scaffold0172 (2 HSPs)
scaffold0172 (23-72)||(32797-32846)
scaffold0172 (35-72)||(15817-15854)
[»] scaffold0955 (1 HSPs)
scaffold0955 (32-68)||(3466-3502)
[»] scaffold0299 (1 HSPs)
scaffold0299 (25-65)||(11534-11574)
[»] scaffold0101 (1 HSPs)
scaffold0101 (25-64)||(43362-43401)
[»] scaffold1367 (1 HSPs)
scaffold1367 (28-65)||(873-910)
[»] scaffold0260 (1 HSPs)
scaffold0260 (34-71)||(15360-15397)
[»] scaffold0118 (1 HSPs)
scaffold0118 (38-71)||(41676-41709)
[»] scaffold0086 (1 HSPs)
scaffold0086 (26-71)||(47382-47427)
[»] scaffold0056 (1 HSPs)
scaffold0056 (26-71)||(61679-61724)
[»] scaffold0517 (1 HSPs)
scaffold0517 (31-71)||(7762-7802)
[»] scaffold0337 (1 HSPs)
scaffold0337 (26-74)||(1750-1798)
[»] scaffold0065 (1 HSPs)
scaffold0065 (26-74)||(12186-12234)
[»] scaffold0021 (1 HSPs)
scaffold0021 (25-65)||(106054-106094)


Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 9832550 - 9832328
Alignment:
Q  18 gaaaccgcactcccaggtcccaagccaataccaccaggccaacccaagtgggttttaacatttcttgtttacataagttctcacaaacaatctcagagtg 117  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9832550 gaaaccgcactcccaggtcccaagccaataccaccgggccaacccaagtgggttttaacatttcttgtttacataagttctcacaaacaatctcagagtg 9832451  T
Q  118 cttatgcacgtacataagctcaaataagtcaatccaaacagccagtaacataaacaataagtagtaaaagtaatgaatttacctaaagaagcgaatgttt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9832450 cttatgcacgtacataagctcaaataagtcaacccaaacagccagtaacataaacaataagtagtaaaagtaatgaatttacctaaagaagcgaatgttt 9832351  T
Q  218 ctaggcacaggtagatccaagtc 240  Q
    |||||||||||||||||||||||    
T  9832350 ctaggcacaggtagatccaagtc 9832328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 10499140 - 10499187
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  10499140 actcccagatcccaagccaataccaccaggccaacccaagtgggtttt 10499187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 8051255 - 8051213
Alignment:
Q  30 ccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8051255 ccaggtcccaagccaataccaccaggccaacccaagtgggttt 8051213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 26871535 - 26871583
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  26871535 actccaaggtcccaagccaacaccaccaggccaacccaagtgggtttta 26871583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 31520635 - 31520683
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  31520635 cactcccagatcccaagccaatgccaccaggccaacccaagtgggtttt 31520683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 16991588 - 16991542
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  16991588 cactcccagatcccaagccaataccaccaggccaacccaaatgggtt 16991542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 3055038 - 3054994
Alignment:
Q  27 ctcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||| |||||||||||||| |||||||||||||||||||||||||    
T  3055038 ctccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 3054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 27093391 - 27093439
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||||    
T  27093391 cactcccaagttccaagccaataccactaggccaacccaagtgggtttt 27093439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 40268535 - 40268487
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  40268535 cactccaaggtcccaagccaacaccaccaggcaaacccaagtgggtttt 40268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 42799777 - 42799821
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtggg 69  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  42799777 cactccaaggtcccaagccaacaccaccaggccaacccaagtggg 42799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 2667908 - 2667869
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaa 64  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  2667908 cactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 36720427 - 36720380
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||  |||||||||||||||||||| |||||||||||||||||    
T  36720427 cactcccatatcccaagccaataccaccagaccaacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 46518674 - 46518627
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  46518674 cactcccagatcccaagccaataccactatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 4222187 - 4222141
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||||    
T  4222187 cactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 16354922 - 16354968
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  16354922 cactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 24460024 - 24459990
Alignment:
Q  37 ccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||||||||||||||||||    
T  24460024 ccaagccaataccaccaggccaacccaagtgggtt 24459990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 27923073 - 27923119
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||    
T  27923073 cacttccatgtcccaagccaataccaccaggccaacctaagtgggtt 27923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 31789000 - 31789046
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  31789000 cactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 14186689 - 14186648
Alignment:
Q  30 ccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  14186689 ccaggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 1360957 - 1360921
Alignment:
Q  35 tcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1360957 tcccaagccaataacaccaggccaacccaagtgggtt 1360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 5499437 - 5499485
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    ||||| ||| || |||| |||||||||||||||||||||||||||||||    
T  5499437 cactctcagatctcaagtcaataccaccaggccaacccaagtgggtttt 5499485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 26989030 - 26988994
Alignment:
Q  37 ccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    ||||||||||||||| |||||||||||||||||||||    
T  26989030 ccaagccaataccactaggccaacccaagtgggtttt 26988994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 42747776 - 42747700
Alignment:
Q  82 ttgtttacataagttctcacaaacaatctcagagtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    |||||| |||||||||||| ||||| ||||| | | |||||| | ||| |||| |||||||||||||| ||||||||    
T  42747776 ttgttttcataagttctcaaaaacagtctcacaatacttatggaagtagataaactcaaataagtcaaaccaaacag 42747700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 10445169 - 10445216
Alignment:
Q  25 cactcccaggtcccaagccaa-taccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||    
T  10445169 cactcccaggtcccaagccaattgccactaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 11092206 - 11092245
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  11092206 aggtcccaagccaacaccactaggccaacccaagtgggtt 11092245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 17554817 - 17554778
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaa 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  17554817 cactcccaggtcccaagccaataccaccaaaccaacccaa 17554778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 18319198 - 18319245
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||||| |||||||||||| ||||||| |||| |||||    
T  18319198 cactcccaggtcccaaaccaataccaccaagccaacctaagtaggttt 18319245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 30311352 - 30311305
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||| ||||||||| ||||||| ||||||||||| ||||||||    
T  30311352 cactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 32651468 - 32651503
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaac 60  Q
    ||||||||||||||||||||||||||| ||||||||    
T  32651468 cactcccaggtcccaagccaataccactaggccaac 32651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 203136 - 203090
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||| | ||||||| ||||||||| |||||||||||||||||||    
T  203136 cactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 12761558 - 12761520
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaaccca 63  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  12761558 cactcccaggtcccaagtcaataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 14339656 - 14339610
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||  ||||||||||||||||||||||||| |||| ||||||    
T  14339656 cactcccaaatcccaagccaataccaccaggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 21960597 - 21960551
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| ||||||||||||||||||||||||  |||||||| ||||||    
T  21960597 cactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 26481973 - 26481927
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| |||||||||||||| |||||||| || ||||||||||||||    
T  26481973 cactctcaggtcccaagccattaccaccaagctaacccaagtgggtt 26481927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 30510230 - 30510272
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||    
T  30510230 actcctaggtcccaagccagtaccaccaggacaacccaagtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 47810774 - 47810820
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| | || |||||||||||||||| ||||||||||||||||    
T  47810774 cactcccaagaccaaagccaataccaccagaccaacccaagtgggtt 47810820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 51903908 - 51903954
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| |||||||||||||||| |||| ||||||| |||||||    
T  51903908 cactcccagatcccaagccaataccaacaggtcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 53863897 - 53863943
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||| | ||||||| |||||||||||||||    
T  53863897 cactccaaggtcccaagccaacatcaccaggacaacccaagtgggtt 53863943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 53956430 - 53956384
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||| |||||||||||||| ||| |||| |||||||||||||||    
T  53956430 cactcccgggtcccaagccaatgccatcaggacaacccaagtgggtt 53956384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 584123 - 584196
Alignment:
Q  83 tgtttacataagttctcacaaacaatctcagagtgcttatgcacgtacataagctcaaataagtcaatccaaac 156  Q
    ||||| ||||| |||||  ||||| ||||| ||  |||||||  ||| ||||||||||||||||||||||||||    
T  584123 tgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 15034389 - 15034348
Alignment:
Q  27 ctcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    |||| |||||||||| ||| ||||||||||||||||||||||    
T  15034389 ctccaaggtcccaaggcaacaccaccaggccaacccaagtgg 15034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 18316528 - 18316573
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggt 70  Q
    |||||| |||||||||||||  |||||||| |||||||||||||||    
T  18316528 cactccaaggtcccaagccagcaccaccagaccaacccaagtgggt 18316573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 30573909 - 30573833
Alignment:
Q  82 ttgtttacataagttctcacaaacaatctca-gagtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    |||||| ||||||||||||||||||| ||||  ||||||||||   ||| || |||||||||||||| ||||||||||    
T  30573909 ttgttttcataagttctcacaaacaaactcacaagtgcttatgtcagtagat-agctcaaataagtccatccaaacag 30573833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 31510749 - 31510794
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||| |||||||| |||||||||||| |||||| |||||||||    
T  31510749 actcccaagtcccaagtcaataccaccagaccaacctaagtgggtt 31510794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 2597264 - 2597296
Alignment:
Q  39 aagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||| ||||||||||||||||    
T  2597264 aagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 32638991 - 32638943
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    ||||||||| | ||||||||||||||||||  |||||||| ||||||||    
T  32638991 cactcccagtttccaagccaataccaccagaacaacccaaatgggtttt 32638943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 47079737 - 47079701
Alignment:
Q  35 tcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  47079737 tcccaagccaacaccaccagaccaacccaagtgggtt 47079701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 16852386 - 16852333
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttttaacat 78  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  16852386 cactcccaggtcccaagccaataccactaggccaacccaagtgggtttaaacat 16852333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 968408 - 968362
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  968408 cactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 18540344 - 18540298
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18540344 cactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 2203538 - 2203494
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtggg 69  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  2203538 cactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 3624626 - 3624582
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtggg 69  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  3624626 cactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 8485045 - 8484998
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  8485045 cactcacaggtcccaagcaaataccaccaggccaacccaagtgggttt 8484998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 19703517 - 19703564
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  19703517 cactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 22268963 - 22269010
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  22268963 cactccaaggtcccaagccaacaccaccaggccaacccaagtgggttt 22269010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 23874415 - 23874458
Alignment:
Q  28 tcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  23874415 tcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 28783106 - 28783059
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  28783106 cactcccaggtctcaagccaataccaccaagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 6530853 - 6530807
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||    
T  6530853 cactcctaggtcccaagccaacaccaccaggccaacccaagtgggtt 6530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 20994488 - 20994534
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  20994488 cactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 26688911 - 26688865
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||    
T  26688911 cactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 29431057 - 29431011
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  29431057 cactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 29858079 - 29858124
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggt 70  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  29858079 cactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 5264587 - 5264543
Alignment:
Q  28 tcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  5264587 tcccaggttccaagccaataccactaggccaacccaagtgggttt 5264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 44780144 - 44780191
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  44780144 cactcccaagtcccaagccaatgccactaggccaacccaagtgggttt 44780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 6436585 - 6436631
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| | |||||||||||||||||||||| |||||||||||||||    
T  6436585 cactcctaagtcccaagccaataccaccagggcaacccaagtgggtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 12988474 - 12988424
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttttaa 75  Q
    |||| |||||| ||||||||||||||| ||||||| |||||||||||||||    
T  12988474 cacttccaggttccaagccaataccactaggccaatccaagtgggttttaa 12988424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 40591778 - 40591732
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||    
T  40591778 cactcccaagtccgaagccaataccaccaggccaacacaagtgggtt 40591732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 32157236 - 32157191
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||||    
T  32157236 actccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 34986147 - 34986102
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||    
T  34986147 actcccaggtcccaaaccaataccaccagaacaacccaagtgggtt 34986102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 4830533 - 4830486
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||| ||| |||||| | |||||||||||||||||||||||||||||    
T  4830533 cactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 5801093 - 5801046
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||| || |||||||| |||||||||||| ||||||||||||||||    
T  5801093 cactcctagatcccaagctaataccaccaggtcaacccaagtgggttt 5801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 3826820 - 3826854
Alignment:
Q  38 caagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||| ||||||||||||||||||||    
T  3826820 caagccaataccactaggccaacccaagtgggttt 3826854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 6569801 - 6569847
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||||||||||||| ||| ||||||||| |||||||||    
T  6569801 cactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 23361679 - 23361725
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||  ||||||| ||||||||||||| |||||||||||||||    
T  23361679 cactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 27121051 - 27121009
Alignment:
Q  30 ccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  27121051 ccaggtctcaagccaataccaccagggcaacccaagtaggttt 27121009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 30483914 - 30483960
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||  |||||||||||||||||  ||||||||||||||||||    
T  30483914 cactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 6526247 - 6526170
Alignment:
Q  82 ttgtttacataagttctcacaaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    |||||| | ||||||||| |||||||||||| | | ||||||||  ||| ||| |||| |||||||||||||||||||    
T  6526247 ttgttttcctaagttctctcaaacaatctcacaagggcttatgccagtagataggctcgaataagtcaatccaaacag 6526170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 45527600 - 45527567
Alignment:
Q  39 aagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||||||||| ||||||||||||||||    
T  45527600 aagccaataccaccaggacaacccaagtgggttt 45527567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 10939451 - 10939523
Alignment:
Q  83 tgtttacataagttctcacaaacaatctcag-agtgcttatgcacgtacataagctcaaataagtcaatccaa 154  Q
    ||||| |||||||||||  ||||| |||||| ||||||||| || ||| |||| ||||||||| |||||||||    
T  10939451 tgttttcataagttctcctaaacagtctcagaagtgcttatacaggtagataaactcaaataattcaatccaa 10939523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 18897205 - 18897165
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||| |||| ||||| ||||||||||||||||||||    
T  18897205 aggtcccaaaccaacaccactaggccaacccaagtgggttt 18897165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 28566144 - 28566104
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||| |||||||||| ||| ||||||||||||||||    
T  28566144 aggtcccaaaccaataccactaggtcaacccaagtgggttt 28566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 28573767 - 28573727
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||| |||||||||| ||| ||||||||||||||||    
T  28573767 aggtcccaaaccaataccactaggtcaacccaagtgggttt 28573727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 36043015 - 36042979
Alignment:
Q  37 ccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  36043015 ccaagccaataccaccagcccaacccaagtggttttt 36042979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 21589333 - 21589288
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21589333 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 21549167 - 21549213
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  21549167 cactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 7918498 - 7918545
Alignment:
Q  24 gcactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  7918498 gcactcccaggttccaagccaataccactaggccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 30109338 - 30109385
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  30109338 cactcccaggtcacaagccaataccaccaagccaacccaagtgggttt 30109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 30883228 - 30883275
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  30883228 cactcccaggtcccaagccaataccactagaccaacccaagtgggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 16457856 - 16457810
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||    
T  16457856 cactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 34984852 - 34984805
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||| ||||||||||||||| || |||||||||||||||||    
T  34984852 cactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 8278305 - 8278351
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  8278305 cactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 14331460 - 14331518
Alignment:
Q  101 caaacaatctca-gagtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    |||||||||||| |||||||||||   ||| ||||||||||||||||||||||||||||    
T  14331460 caaacaatctcaagagtgcttatgacagtagataagctcaaataagtcaatccaaacag 14331518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 16773853 - 16773807
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  16773853 cactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 25627103 - 25627057
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||    
T  25627103 cactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 26078082 - 26078128
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  26078082 actcccaagtcccaaaccaataccactaggccaacccaagtgggttt 26078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 29075827 - 29075781
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  29075827 cactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 892511 - 892550
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  892511 aggtcccaagccaataccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 3252318 - 3252365
Alignment:
Q  24 gcactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  3252318 gcactcccaagtctcaagtcaataccactaggccaacccaagtgggtt 3252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 5390879 - 5390926
Alignment:
Q  24 gcactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| | |||||||||||||||| |||||||||||| ||||||    
T  5390879 gcactcccaagccccaagccaataccactaggccaacccaaatgggtt 5390926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 14285207 - 14285160
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||| |||||||||| ||||  |||||||||||||||||||    
T  14285207 cactcccaggttccaagccaattccactcggccaacccaagtgggttt 14285160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 22737128 - 22737081
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||| ||| |||||||||||||||||| || |||||||||||||||||    
T  22737128 cacttccaagtcccaagccaataccactagaccaacccaagtgggttt 22737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 26598570 - 26598523
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||| ||| ||||||||||||||||| ||||||| ||||||||||||    
T  26598570 cactctcagatcccaagccaataccactaggccaatccaagtgggttt 26598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 29692416 - 29692463
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||| |||||| ||||||||||||| ||||||||| |||||||    
T  29692416 cactcccagatcccaatccaataccaccagaccaacccaaatgggttt 29692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 14495835 - 14495881
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||||||| |||||||||||| ||||||||| ||||||    
T  14495835 cactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 16436655 - 16436617
Alignment:
Q  34 gtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  16436655 gtcccaagccaataccactaggccaacccaagtgagttt 16436617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 19373285 - 19373239
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||    
T  19373285 cactccaaggtctcaagccaacaccaccaggccaactcaagtgggtt 19373239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 22020892 - 22020941
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    ||||||||| |||||||| |||||||| | ||||||||||| ||||||||    
T  22020892 cactcccagatcccaagctaataccactatgccaacccaagagggtttta 22020941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 31669055 - 31669100
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  31669055 actccaaggtcccaagccaacaccatcagaccaacccaagtgggtt 31669100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 31723913 - 31723954
Alignment:
Q  114 agtgcttatgcacgtacataagctcaaataagtcaatccaaa 155  Q
    |||| ||||||  |||||||||||||||||||||||||||||    
T  31723913 agtgtttatgctagtacataagctcaaataagtcaatccaaa 31723954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 3915034 - 3915074
Alignment:
Q  31 caggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| |||||| ||||||||||||||||||||||| ||||    
T  3915034 caggttccaagctaataccaccaggccaacccaagtaggtt 3915074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 26004959 - 26004915
Alignment:
Q  114 agtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    |||||||||||  ||| ||||||| ||||||||||||||||||||    
T  26004959 agtgcttatgctagtagataagctaaaataagtcaatccaaacag 26004915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 32670671 - 32670703
Alignment:
Q  39 aagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||| |||||||    
T  32670671 aagccaataccaccaggccaacccaggtgggtt 32670703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 37720244 - 37720293
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37720244 cactcccaggtcccaagccaataacaccaggccaacccaagtgggtttta 37720293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 55427231 - 55427276
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  55427231 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 51250552 - 51250599
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51250552 cactcccagatcccaagccaataccaccaggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 19238607 - 19238653
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  19238607 cactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 37109381 - 37109427
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  37109381 cactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29195141 - 29195093
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  29195141 cactccaaggtcccaagccaacaccaccaggccaacccaagtgggtttt 29195093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 27965540 - 27965587
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  27965540 cactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 9241055 - 9241101
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||    
T  9241055 cactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 46545757 - 46545705
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttttaaca 77  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||| |||||    
T  46545757 cactctcaggtctcaagccaataccactaggccaacccaagtgggttataaca 46545705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 1730519 - 1730565
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  1730519 cactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 37443748 - 37443702
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  37443748 cactcccagatcccaagccaataccactaggtcaacccaagtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 24827873 - 24827824
Alignment:
Q  23 cgcactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  24827873 cgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggttt 24827824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 40284016 - 40284065
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    |||||||| ||||||||||||||||| || ||||||||||||||| ||||    
T  40284016 cactcccaagtcccaagccaataccatcatgccaacccaagtgggattta 40284065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 7292828 - 7292871
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    ||||||||||| ||||||||||||||| || |||||||||||||    
T  7292828 cactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 7949484 - 7949531
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||| |||||||||||||||||| | |||||| |||||||||||||    
T  7949484 cactccgaggtcccaagccaataccgctaggccagcccaagtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 19680818 - 19680865
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||| ||||||||| |||||||| ||||||| ||||||||||||    
T  19680818 cactcccaagtcccaagcgaataccactaggccaatccaagtgggttt 19680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 21344863 - 21344816
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||| |||||||||||||| | || |||||||||||||||||||||    
T  21344863 cactccaaggtcccaagccaacatcatcaggccaacccaagtgggttt 21344816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 37274489 - 37274536
Alignment:
Q  25 cactcccaggtcccaagccaa-taccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||    
T  37274489 cactcccaggtcccaagccaattacgactaggccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 37455608 - 37455569
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  37455608 aggtcccaagccaacaccaccaggccaacccaagttggtt 37455569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 39030143 - 39030186
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    |||||| |||||||||||||| |||||||||||||||| |||||    
T  39030143 cactccaaggtcccaagccaacaccaccaggccaaccccagtgg 39030186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 42281270 - 42281309
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  42281270 aggtcccaagccaacaccacctggccaacccaagtgggtt 42281309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 49576924 - 49576963
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaa 64  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  49576924 cactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 13496287 - 13496241
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| || |||||||| ||||||||||| |||||||||||||||||    
T  13496287 cactcacatgtcccaagtcaataccaccatgccaacccaagtgggtt 13496241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 13901788 - 13901746
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtg 67  Q
    |||||||||||| |||||||||||||| || ||||||||||||    
T  13901788 cactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 15180787 - 15180741
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||| || |||| | |||||||||    
T  15180787 cactcccaggtcccaagccaataccactagaccaatctaagtgggtt 15180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 17618327 - 17618281
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||| |||||||||||||||| |||  ||||||||||||    
T  17618327 cactcccaggtctcaagccaataccaccaagccggcccaagtgggtt 17618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 24234691 - 24234649
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtg 67  Q
    |||||||| ||||||||||||||||||| || |||||||||||    
T  24234691 cactcccaagtcccaagccaataccacctggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 28635742 - 28635696
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||||||| || |||||||||| |||||||||||||||    
T  28635742 cactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 31759688 - 31759734
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| |||||||||||||||||| ||  |||||||||||||||    
T  31759688 cactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 37980177 - 37980219
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtg 67  Q
    |||||| |||||||||||||| | |||||||||||||||||||    
T  37980177 cactccaaggtcccaagccaacatcaccaggccaacccaagtg 37980219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 38206155 - 38206201
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||  ||||||||| |||||||||||||||    
T  38206155 cactccaaggtcccaagccagcaccaccaggtcaacccaagtgggtt 38206201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 56409997 - 56409951
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||| | |||||||||| ||||||||||||    
T  56409997 cactccaaggtcccaagccaacagcaccaggccagcccaagtgggtt 56409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 2622425 - 2622475
Alignment:
Q  25 cactcccaggtcccaagccaat----accaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||    ||||| |||||||||||||||||||    
T  2622425 cactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 6606102 - 6606057
Alignment:
Q  27 ctcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||| |||||||||||||| |||| ||| |||||||||||||||||    
T  6606102 ctccaaggtcccaagccaacaccatcagaccaacccaagtgggttt 6606057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 160
Target Start/End: Complemental strand, 17975282 - 17975253
Alignment:
Q  131 ataagctcaaataagtcaatccaaacagcc 160  Q
    ||||||||||||||||||||||||||||||    
T  17975282 ataagctcaaataagtcaatccaaacagcc 17975253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 19229246 - 19229283
Alignment:
Q  34 gtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  19229246 gtcccaggccaataccaccaggccaacccaaatgggtt 19229283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 47044762 - 47044717
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||| ||| ||||||| ||||||||||||||||| |||||||||||    
T  47044762 actctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 2185062 - 2185110
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaaccc-aagtgggttt 72  Q
    ||||||||||| |||||||| |||||| |||||||||| ||||||||||    
T  2185062 cactcccaggttccaagccattaccactaggccaacccgaagtgggttt 2185110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 25717668 - 25717744
Alignment:
Q  82 ttgtttacataagttctcacaaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaaca 157  Q
    |||||| |||||| |||  |||||||| ||| | |||||||||   ||||||||||||||||||| |||||||||||    
T  25717668 ttgtttccataagctcttccaaacaatttcacaagtgcttatgtcggtacataagctcaaataagacaatccaaaca 25717744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 28615411 - 28615486
Alignment:
Q  83 tgtttacataagttctcacaaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    ||||| ||||||||||| |||||||||||| | ||| ||||||  ||| |||| || ||||||||||||||||||||    
T  28615411 tgttttcataagttctc-caaacaatctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaacag 28615486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 33619250 - 33619206
Alignment:
Q  27 ctcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||| ||| ||||||||||||||| | |||||||||||||||    
T  33619250 ctcccagatcctaagccaataccaccaaggcaacccaagtgggtt 33619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Complemental strand, 49940111 - 49940083
Alignment:
Q  132 taagctcaaataagtcaatccaaacagcc 160  Q
    |||||||||||||||||||||||||||||    
T  49940111 taagctcaaataagtcaatccaaacagcc 49940083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 41487408 - 41487360
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41487408 cactcccaagtcccaagccaataccaccaggccaacccaagtgggtttt 41487360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 30579381 - 30579334
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  30579381 cactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 25021365 - 25021411
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  25021365 cactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 26459440 - 26459486
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  26459440 cactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 42836031 - 42836077
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  42836031 cactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 39631889 - 39631844
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  39631889 actcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 22932739 - 22932787
Alignment:
Q  23 cgcactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22932739 cgcactcccaggtcccaagccaataccaccataccaacccaagtgggtt 22932787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 15905703 - 15905746
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  15905703 cactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 7801226 - 7801180
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  7801226 cactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 22760909 - 22760863
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  22760909 cactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 23301632 - 23301678
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||    
T  23301632 cactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 39499749 - 39499795
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  39499749 cactcacaggtcccaagccaataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 43590953 - 43590907
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  43590953 cactcccaagtcccaagccaataccaccaggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 48771984 - 48771938
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  48771984 cactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 30442533 - 30442488
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  30442533 actcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 11720993 - 11721037
Alignment:
Q  28 tcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||||||||||||||||||||||| |||| |||||    
T  11720993 tcccaggtcccaagccaataccaccaggccaaccgaagttggttt 11721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 43215230 - 43215182
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  43215230 cactccgaggtcccaagccaataccactagaccaacccaagtgggtttt 43215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 2446354 - 2446307
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||||    
T  2446354 cactcccaagtcccaagccaataccatcagaccaacccaagtgggttt 2446307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 5273627 - 5273666
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  5273627 aggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 23552164 - 23552117
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  23552164 cactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 45976953 - 45976996
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    |||||||||||| |||||||||||||| ||||||||||||||||    
T  45976953 cactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 5579264 - 5579310
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||    
T  5579264 cactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 19553499 - 19553454
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  19553499 cactcccaggtcc-aagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 25956322 - 25956368
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||    
T  25956322 cactccaaggtcccaagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 45559246 - 45559200
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||||    
T  45559246 cactccaaggttccaagccaataccactaggccaacccaagtgggtt 45559200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 48125204 - 48125250
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||| |||||||| ||||||||||||||||    
T  48125204 cactccaaggtcccaagccaacaccaccagaccaacccaagtgggtt 48125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 35328911 - 35328952
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  35328911 aggttccaagccaacaccaccaggccaacccaagtgggtttt 35328952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 1418502 - 1418570
Alignment:
Q  90 ataagttctcacaaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaaca 157  Q
    ||||| |||||||||||  |||| | ||||||||||  ||| |||||||||||||||||||||||||||    
T  1418502 ataagctctcacaaacagcctcataagtgcttatgccagtagataagctcaaataagtcaatccaaaca 1418570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 21854594 - 21854550
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtggg 69  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||    
T  21854594 cactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 26199549 - 26199509
Alignment:
Q  31 caggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  26199549 caggtcccaagccaataccactaggccaactcaagtgggtt 26199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 38374636 - 38374676
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  38374636 aggtcccaagccaacaccaccacgccaacccaagtgggttt 38374676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 43663127 - 43663175
Alignment:
Q  27 ctcccaggtcccaagccaataccaccaggccaacccaagtgggttttaa 75  Q
    |||| |||||||||| |||||||| ||||||||||||||||| ||||||    
T  43663127 ctcctaggtcccaagtcaataccatcaggccaacccaagtggattttaa 43663175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 6426093 - 6426128
Alignment:
Q  36 cccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||| |||||||||||||||||||||||||    
T  6426093 cccaagccaacaccaccaggccaacccaagtgggtt 6426128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 20952179 - 20952222
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||    
T  20952179 cactcccaggtcccaaaccaataccatcaggtcaacccaagtgg 20952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 25596129 - 25596184
Alignment:
Q  103 aacaatctcagagtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    |||||||||| | |||||||||  ||| |||||||||||||||||| |||||||||    
T  25596129 aacaatctcacaatgcttatgctggtagataagctcaaataagtcagtccaaacag 25596184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 31835227 - 31835192
Alignment:
Q  36 cccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||| |||||||||||||||||||||||||    
T  31835227 cccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 3280523 - 3280561
Alignment:
Q  33 ggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  3280523 ggtcccaagccaataccaccatgtcaacccaagtgggtt 3280561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 20335861 - 20335907
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| |||||||||||||||| | || ||||||||||||||||    
T  20335861 cactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 24513843 - 24513797
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||  || |||||||||||||| |||||||||||||||||||    
T  24513843 cactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 25590657 - 25590611
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| || ||||||||||||| |||| |||||||||||||||    
T  25590657 cactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 27776218 - 27776172
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| || |||||||||  |||||||||||||||||||||||||||    
T  27776218 cactctcaagtcccaagcgtataccaccaggccaacccaagtgggtt 27776172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 33869475 - 33869521
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||| ||||||| ||||||||||| || |||||||||||||||||||    
T  33869475 cacttccaggtctcaagccaatactactaggccaacccaagtgggtt 33869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 22702274 - 22702237
Alignment:
Q  37 ccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  22702274 ccaagccaataccaccagaccaatccaagtgggtttta 22702237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 48039690 - 48039723
Alignment:
Q  38 caagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| |||||||||||||||||||||||||    
T  48039690 caagccaacaccaccaggccaacccaagtgggtt 48039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 4161324 - 4161288
Alignment:
Q  35 tcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  4161324 tcccaagccaataccaccagaccaacccaaatgggtt 4161288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 15137589 - 15137553
Alignment:
Q  35 tcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||| || ||||||||||||||||||||||||||    
T  15137589 tcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 23214930 - 23215006
Alignment:
Q  82 ttgtttacataagttctcacaaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaaca 157  Q
    |||||| ||||| ||||| |||||| ||||| | ||| ||||||  ||| ||||| |||||||||||||||||||||    
T  23214930 ttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaaca 23215006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 36890993 - 36891021
Alignment:
Q  128 tacataagctcaaataagtcaatccaaac 156  Q
    |||||||||||||||||||||||||||||    
T  36890993 tacataagctcaaataagtcaatccaaac 36891021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 44628213 - 44628257
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtggg 69  Q
    |||||| ||||||||||| || | |||||||||||||||||||||    
T  44628213 cactccaaggtcccaagctaacaacaccaggccaacccaagtggg 44628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 33549150 - 33549102
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33549150 cactcccaggtcccaagccaataccaccagaccaacccaagtgggtttt 33549102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 12188333 - 12188380
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12188333 cactcccaggtcccaagccaataccactaggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 12234537 - 12234584
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  12234537 cactcccaggtcccaagtcaataccaccaggccaacctaagtgggttt 12234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 31623021 - 31623068
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||    
T  31623021 cactcccaggtcccaagccaataccaccggaccaacccaagtgggttt 31623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 21418516 - 21418470
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  21418516 cactcccaagtcccaagccaataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 10338204 - 10338251
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  10338204 cactcctaggtcccaagccaataccaccatgccaacccaagtgagttt 10338251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 13441096 - 13441053
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    |||||||||||||||||||||||||||| | |||||||||||||    
T  13441096 cactcccaggtcccaagccaataccacccgaccaacccaagtgg 13441053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 6776641 - 6776679
Alignment:
Q  29 cccaggtcccaagccaataccaccaggccaacccaagtg 67  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  6776641 cccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 14558008 - 14557962
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||    
T  14558008 cacttccaggtcccaagccaacaccaccagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 30127446 - 30127400
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||||    
T  30127446 cactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 22701 - 22749
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||| |||||||||||||| ||||| || ||||||||||||||||||    
T  22701 cactccaaggtcccaagccaaaaccactagcccaacccaagtgggtttt 22749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 14278139 - 14278186
Alignment:
Q  23 cgcactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  14278139 cgcactcccaggtccaaagccaata-caccaggccaacccatgtgggtt 14278186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 32613170 - 32613214
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtggg 69  Q
    |||||||||  |||||| |||||||||||||||||||||||||||    
T  32613170 cactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 28028569 - 28028530
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  28028569 aggtcccaagtcaacaccaccaggccaacccaagtgggtt 28028530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 30536954 - 30536883
Alignment:
Q  88 acataagttctcacaaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    ||||||||||||||||||| ||| | | || |||||| | ||| |||| |||||||||||||||||||||||    
T  30536954 acataagttctcacaaacagtctaataagtacttatgtaagtagataaactcaaataagtcaatccaaacag 30536883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 24641220 - 24641266
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| ||||||| ||||||||||| |||||||||| ||||||    
T  24641220 cactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 1056716 - 1056761
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||| |||||| ||||||||||| ||| |||||||||||||||    
T  1056716 actcccaagtcccaggccaataccactaggtcaacccaagtgggtt 1056761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 6758452 - 6758497
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggt 70  Q
    ||||||||  ||| |||||||||||||||||||||| |||||||||    
T  6758452 cactcccaaatcctaagccaataccaccaggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 12111075 - 12111116
Alignment:
Q  114 agtgcttatgcacgtacataagctcaaataagtcaatccaaa 155  Q
    |||||||||||  ||| |||||||||||||||||||||||||    
T  12111075 agtgcttatgctagtagataagctcaaataagtcaatccaaa 12111116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 34444842 - 34444809
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaag 65  Q
    |||||||||| |||||||||||||||||||||||    
T  34444842 aggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 11597940 - 11597904
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaaccc 62  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  11597940 actcccagatcccaagccaataccaccaggtcaaccc 11597904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 24507567 - 24507615
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    ||||| |||||||||||||| ||||| |||||||||||| || ||||||    
T  24507567 actccaaggtcccaagccaacaccactaggccaacccaaatgagtttta 24507615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 37480121 - 37480074
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37480121 cactctcaggtcccaagccaataccaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 42602600 - 42602553
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42602600 cactcccaggtcccaagccaataccactaggccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 42327425 - 42327471
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  42327425 cactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 7799065 - 7799114
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  7799065 cactcccaagtcccaagccaataccaccaggacaacccaagtgggtttta 7799114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 29503317 - 29503270
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  29503317 cactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 39715038 - 39714991
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  39715038 cactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 23052553 - 23052599
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||    
T  23052553 cactcccaagtcccaagccaataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 37756004 - 37756046
Alignment:
Q  28 tcccaggtcccaagccaataccaccaggccaacccaagtgggt 70  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  37756004 tcccaggtcccaagccaataccaccaagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 42922460 - 42922414
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  42922460 cactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 25931052 - 25931004
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  25931052 cactctcaggtcccaaaccaataccaccaggccaacccaaatgggtttt 25931004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 1729862 - 1729815
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||| |||||||||||||||||| || |||||||||||||||||    
T  1729862 cactcccaagtcccaagccaataccactagcccaacccaagtgggttt 1729815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 21213815 - 21213768
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||    
T  21213815 cactcccaggtcccaagccaataccaccagaccaacccatgcgggttt 21213768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 29197406 - 29197453
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  29197406 cactcccaagtcccaagtcaataccaccaagccaacccaagtgggttt 29197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 342441 - 342395
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||    
T  342441 cactccaaggtcacaagccaacaccaccaggccaacccaagtgggtt 342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 155
Target Start/End: Complemental strand, 28803525 - 28803451
Alignment:
Q  82 ttgtttacataagttctcacaaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaa 155  Q
    |||||| |||| |||||| |||||| ||||| | ||||||||||  ||| |||||||||||||||||||||||||    
T  28803525 ttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaa 28803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 32106612 - 32106566
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||| ||| |||||||||||||||||||||||||    
T  32106612 cactccaaggtcccaagtcaacaccaccaggccaacccaagtgggtt 32106566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 2142729 - 2142806
Alignment:
Q  81 cttgtttacataagttctcacaaacaatctcagagtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    ||||||| ||||||||||| |||||| ||||| |   |||||||| ||| |||| |||||||||||||| ||||||||    
T  2142729 cttgttttcataagttctcccaaacagtctcataaaacttatgcatgtagataaactcaaataagtcaaaccaaacag 2142806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 3697431 - 3697476
Alignment:
Q  27 ctcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||| ||||||||||||||||||| ||| |||||||||||||||||    
T  3697431 ctccaaggtcccaagccaataccatcagaccaacccaagtgggttt 3697476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 16918608 - 16918653
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggt 70  Q
    ||||||||| |||||| |||||||||| ||||||||||||||||||    
T  16918608 cactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 40416421 - 40416466
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||    
T  40416421 actcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 12086159 - 12086203
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtggg 69  Q
    |||| |||||||||||||||||||||||||||||||  |||||||    
T  12086159 cacttccaggtcccaagccaataccaccaggccaacttaagtggg 12086203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 27317455 - 27317531
Alignment:
Q  82 ttgtttacataagttctcacaaacaatctcagagtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    |||||| ||||||||||| |||||| ||||| |   ||||||   ||| ||||||||||||||||||||||||||||    
T  27317455 ttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaacag 27317531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 28677653 - 28677577
Alignment:
Q  83 tgtttacataagttctcacaaacaatctcag-agtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    ||||| ||||||||||| |||||| ||| || ||| |||||||| ||| ||||||||||| || |||||||||||||    
T  28677653 tgttttcataagttctcccaaacagtcttagcagtacttatgcaagtaaataagctcaaaaaaatcaatccaaacag 28677577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 19322814 - 19322767
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||||||| |||||||||| ||  ||||||||||||||||    
T  19322814 cactcccaggtcccaaaccaataccactagatcaacccaagtgggttt 19322767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 30359700 - 30359657
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||    
T  30359700 cactccaaggtcccaagccaacaccaccaagccaacccaagtgg 30359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 11062406 - 11062360
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| || ||||||||||| ||| |||||||||||||||||||    
T  11062406 cactcccaagttccaagccaatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 15370283 - 15370241
Alignment:
Q  116 tgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    |||||||||  ||| ||||||||||||||||||||||||||||    
T  15370283 tgcttatgccagtagataagctcaaataagtcaatccaaacag 15370241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 16381684 - 16381730
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||||||    
T  16381684 cactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 16525224 - 16525178
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| | |||||||||||| |||| ||||||||||||||||||||    
T  16525224 cactccaacgtcccaagccaacaccatcaggccaacccaagtgggtt 16525178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 18825387 - 18825341
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||| |||||||||  ||||||||||||||    
T  18825387 cactcctaggtcccaagccaacaccaccaggtaaacccaagtgggtt 18825341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 19016077 - 19016031
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| ||| ||||||||||||| ||| ||||||||||||||||    
T  19016077 cactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 24191884 - 24191842
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtg 67  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  24191884 cactctcaggtcccaagccaataccatcaggccaactcaagtg 24191842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 26482139 - 26482093
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||| |||| |||||||||| |||||||||    
T  26482139 cactcctaggtcccaagccaacaccatcaggccaacctaagtgggtt 26482093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 160
Target Start/End: Complemental strand, 3078553 - 3078524
Alignment:
Q  131 ataagctcaaataagtcaatccaaacagcc 160  Q
    ||||||||||||||||||||||||||||||    
T  3078553 ataagctcaaataagtcaatccaaacagcc 3078524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 30808683 - 30808724
Alignment:
Q  31 caggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||| |||||||||| |||||| |||||||||||||||||    
T  30808683 caggtctcaagccaatatcaccagaccaacccaagtgggttt 30808724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 22878173 - 22878249
Alignment:
Q  82 ttgtttacataagttctcacaaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaaca 157  Q
    |||||| |||||| |||| |||||| ||||| | |||||||||   ||  |||||||||||||||||||||||||||    
T  22878173 ttgtttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaaca 22878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 24144716 - 24144676
Alignment:
Q  31 caggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||| |||||||| |||||||| |||||||||||    
T  24144716 caggtcccaagtcaataccatcaggccaatccaagtgggtt 24144676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 40257445 - 40257398
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  40257445 cactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 9165225 - 9165271
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  9165225 cactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 36371516 - 36371469
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  36371516 cactcccaggttccaagccaataccactaggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 41508877 - 41508826
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttttaac 76  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  41508877 cactcccagatcccaaaccagtaccaccaggccaacccaagtgggttttaac 41508826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 15581171 - 15581217
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||    
T  15581171 cactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 15581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 16170008 - 16170054
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  16170008 cactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 31794294 - 31794340
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||    
T  31794294 cactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 52116811 - 52116857
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  52116811 cactcccaagtcccaagccaataccaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 44126441 - 44126396
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggt 70  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  44126441 cactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 19528367 - 19528403
Alignment:
Q  35 tcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||||||||||||||||||||    
T  19528367 tcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 37047031 - 37046983
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  37047031 cactccaaggtcccaagccaacaccaccagaccaacccaagtgggtttt 37046983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 4566594 - 4566547
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  4566594 cactcccaggttccaagccaatatcactaggccaacccaagtgggttt 4566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 51013156 - 51013207
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttttaac 76  Q
    |||||||| ||||||||||| |||||||||||||||| || |||||||||||    
T  51013156 cactcccatgtcccaagccagtaccaccaggccaaccaaaatgggttttaac 51013207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 952557 - 952511
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  952557 cactcccaggtcccaagccaacaccaccagaccaactcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 21694492 - 21694446
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||||    
T  21694492 cactcccaagtctcaagccaataccaccaggtcaacccaagtgggtt 21694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 24857860 - 24857906
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||    
T  24857860 cactccaaggtccctagccaacaccaccaggccaacccaagtgggtt 24857906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 1690108 - 1690153
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||    
T  1690108 actcccaggtcccaagccaataccaccagaccaattcaagtgggtt 1690153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 21547512 - 21547557
Alignment:
Q  27 ctcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||    
T  21547512 ctcccatgtcccaagccaataccactaggccaacccaagtcggttt 21547557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 37310007 - 37310052
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||    
T  37310007 actcccagatccgaagctaataccaccaggccaacccaagtgggtt 37310052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 17745292 - 17745328
Alignment:
Q  31 caggtcccaagccaataccaccaggccaacccaagtg 67  Q
    ||||||||||||||||||||| |||||||||||||||    
T  17745292 caggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 33700803 - 33700847
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtggg 69  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||    
T  33700803 cactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 34228920 - 34228872
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||| |||||||||||||| |||||||| ||||| ||||||||||||    
T  34228920 cactccgaggtcccaagccaacaccaccagaccaactcaagtgggtttt 34228872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 39012337 - 39012289
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    |||||| |||||||||||||| ||||| ||||||||| |||||||||||    
T  39012337 cactccaaggtcccaagccaacaccactaggccaaccaaagtgggtttt 39012289  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 6292580 - 6292643
Alignment:
Q  95 ttctcacaaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaaca 157  Q
    ||||| |||||||||||| | |||||||||   ||| |||||||||||||||||||||||||||    
T  6292580 ttctcccaaacaatctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 8177212 - 8177259
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||| ||||||||||||||||| |||||||| ||| |||||||    
T  8177212 cactcccagatcccaagccaataccactaggccaactcaaatgggttt 8177259  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 45235409 - 45235456
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    |||||||| ||||||| ||||||||| ||| |||||||||||||||||    
T  45235409 cactcccaagtcccaaaccaataccatcagaccaacccaagtgggttt 45235456  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 50901628 - 50901581
Alignment:
Q  25 cactcccaggtcccaagccaat-accaccaggccaacccaagtgggtt 71  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  50901628 cactaccaggtcccaagccaattaccactaggccaacccaagtgggtt 50901581  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 48400216 - 48400178
Alignment:
Q  27 ctcccaggtcccaagccaataccaccaggccaacccaag 65  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  48400216 ctccaaggtcccaagccaataccatcaggccaacccaag 48400178  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 7218050 - 7217993
Alignment:
Q  101 caaacaatctcaga-gtgcttatgcacgtacataagctcaaataagtcaatccaaaca 157  Q
    |||||||||||||| ||| ||||||  ||| ||||||| |||||||||||||||||||    
T  7218050 caaacaatctcagaagtgtttatgccggtagataagcttaaataagtcaatccaaaca 7217993  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 10526868 - 10526823
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||||||||||||||||||||  | ||||||||| ||||||    
T  10526868 actcccaggtcccaagccaataccactggaccaacccaaatgggtt 10526823  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 160
Target Start/End: Original strand, 11695987 - 11696016
Alignment:
Q  131 ataagctcaaataagtcaatccaaacagcc 160  Q
    ||||||||||||||||||||||||||||||    
T  11695987 ataagctcaaataagtcaatccaaacagcc 11696016  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 28022158 - 28022191
Alignment:
Q  28 tcccaggtcccaagccaataccaccaggccaacc 61  Q
    |||||||||||||||||||||||||||| |||||    
T  28022158 tcccaggtcccaagccaataccaccaggacaacc 28022191  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 29817721 - 29817672
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    ||||| |||||| |||| ||||| ||||||||||||||||||| ||||||    
T  29817721 cactctcaggtctcaagtcaatatcaccaggccaacccaagtgagtttta 29817672  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 30689057 - 30689012
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||| |||||||||||| |||| ||||| |||||||||    
T  30689057 actcccaggtcctaagccaataccatcagggcaacctaagtgggtt 30689012  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 51814540 - 51814491
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    ||||| ||| || |||| |||||||| |||||||||||||||||||||||    
T  51814540 cactctcagatctcaagtcaataccatcaggccaacccaagtgggtttta 51814491  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 2220012 - 2219972
Alignment:
Q  31 caggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||| ||||||||||||||||||  |||||||||||||||    
T  2220012 caggttccaagccaataccaccagaacaacccaagtgggtt 2219972  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 26232416 - 26232464
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtttt 73  Q
    ||||||||| || |||||||||||||| || ||||||||||||| ||||    
T  26232416 cactcccagatctcaagccaataccactagaccaacccaagtggatttt 26232464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 37241782 - 37241739
Alignment:
Q  114 agtgcttatgcacgtacataagctcaaataagtcaatccaaacag 158  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||    
T  37241782 agtgcttatgca-gtagataagcttaaataagtcaatccaaacag 37241739  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 37400314 - 37400274
Alignment:
Q  31 caggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| ||||||||||||||||| ||||||||||| ||||    
T  37400314 caggtctcaagccaataccaccagaccaacccaagttggtt 37400274  T

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Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 15353 - 15399
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  15353 cactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 10267 - 10218
Alignment:
Q  23 cgcactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  10267 cgcactcccagatcccaagccaatatcatcaggccaacccaagtgggttt 10218  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 95001 - 95044
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  95001 cactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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Target: scaffold0070 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 38933 - 38975
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  38933 actcctaggtcccaagccaataccaccagaccaacccaagtgg 38975  T

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Target: scaffold0032 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 112328 - 112282
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||||    
T  112328 cactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

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Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 32797 - 32846
Alignment:
Q  23 cgcactcccaggtcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||| ||||| |||  |||||||||||||||||||||||||||||||||    
T  32797 cgcacccccagatcctcagccaataccaccaggccaacccaagtgggttt 32846  T

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Target: scaffold0172; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 15817 - 15854
Alignment:
Q  35 tcccaagccaataccaccaggccaacccaagtgggttt 72  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  15817 tcccaagccaataccaccaggccaacttaagtgggttt 15854  T

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Target: scaffold0955 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0955
Description:

Target: scaffold0955; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 3502 - 3466
Alignment:
Q  32 aggtcccaagccaataccaccaggccaacccaagtgg 68  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3502 aggtcccaagccaataccacccggccaacccaagtgg 3466  T

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Target: scaffold0299 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 11574 - 11534
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaag 65  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  11574 cactcccagatcccaagccaataccaccaggccatcccaag 11534  T

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Target: scaffold0101 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 43362 - 43401
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaa 64  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  43362 cactcccaagtcccaagccaataccaccatgccaacccaa 43401  T

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Target: scaffold1367 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 873 - 910
Alignment:
Q  28 tcccaggtcccaagccaataccaccaggccaacccaag 65  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  873 tcccagatcccaagccaataccaccaggccaccccaag 910  T

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Target: scaffold0260 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 15360 - 15397
Alignment:
Q  34 gtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  15360 gtcccaagccaacaccaccagaccaacccaagtgggtt 15397  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 41676 - 41709
Alignment:
Q  38 caagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||| |||||||||||||||||||    
T  41676 caagccaataccactaggccaacccaagtgggtt 41709  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 47427 - 47382
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||| ||| ||||||||||||| |||| ||||||||||||||    
T  47427 actcccagatcctaagccaataccacaaggcaaacccaagtgggtt 47382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 61679 - 61724
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||||||||||||||||||||||| ||  ||||||| |||||||    
T  61679 actcccaggtcccaagccaataccactagatcaacccatgtgggtt 61724  T

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Target: scaffold0517 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 7762 - 7802
Alignment:
Q  31 caggtcccaagccaataccaccaggccaacccaagtgggtt 71  Q
    |||||| ||||||||||||||||| ||||||||||| ||||    
T  7762 caggtctcaagccaataccaccagaccaacccaagttggtt 7802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 1798 - 1750
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    ||||| |||||||||||||| ||||| |||||||||||| || ||||||    
T  1798 actccaaggtcccaagccaacaccactaggccaacccaaatgagtttta 1750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 12234 - 12186
Alignment:
Q  26 actcccaggtcccaagccaataccaccaggccaacccaagtgggtttta 74  Q
    ||||| |||||||||||||| ||||| |||||||||||| || ||||||    
T  12234 actccaaggtcccaagccaacaccactaggccaacccaaatgagtttta 12186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 106094 - 106054
Alignment:
Q  25 cactcccaggtcccaagccaataccaccaggccaacccaag 65  Q
    ||||||| |||||||||| |||||||||| |||||||||||    
T  106094 cactccctggtcccaagctaataccaccacgccaacccaag 106054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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