View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7947_low_33 (Length: 277)
Name: NF7947_low_33
Description: NF7947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7947_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 244433 - 244186
Alignment:
| Q |
23 |
aagtacaaccttggagaggagcttcattatccatttccatcaacactttgtaaaagacatcaacattacaaggaagagccaaaggtccttggcagctata |
122 |
Q |
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| T |
244433 |
aagtacaaccttggagaggagcttcattatccatttccatcaacactttgtaaaagacatcaacattacaaggaagagccaaaggtccttggcagctata |
244334 |
T |
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| Q |
123 |
accatattctgattcagcttcttcaagcaacatcttgaacaaaggatgattagcatactcagttttgatcacaaacctttgcatttgaggtccaacgtac |
222 |
Q |
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| T |
244333 |
accatattctgattcagcttcttcaagcaacatcttgaacaaaggatgattagcatactcagttttgatcacaaacctttgcatttgaggtccaacgtac |
244234 |
T |
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| Q |
223 |
accgaaaagcatccctccggggccactttctttcgtctatattcttcg |
270 |
Q |
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| T |
244233 |
accgaaaagcatccctccggggccactttctttcgtctattttcttcg |
244186 |
T |
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