View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7947_low_39 (Length: 254)
Name: NF7947_low_39
Description: NF7947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7947_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 45937793 - 45937556
Alignment:
| Q |
2 |
cagttattgattaatattgcaatatgtaatttatgtaaaatcgttagttttatctatttttggtatttagatactagtctaaaactcataccatgtagtg |
101 |
Q |
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| T |
45937793 |
cagttattgattaatattctaatatgtaatttatgtaaaatcgttagttttatctatttttagtatttagatactagtctaaaactcataccatgtagtg |
45937694 |
T |
|
| Q |
102 |
gtaatttccttgcatcattgaaaatgaacttaattaggtgaacaaaattctggtagatgtcaaaaggtaatgtaaataagctaataaactgatacggctt |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45937693 |
gtaatttccttgcatcattgaaaatgaacttaattaggtgaacaaaattctggtagatgtcaaaaggtaatgtaaataagctaataaactgatacggctt |
45937594 |
T |
|
| Q |
202 |
taaaaatttgaagttgatagttgattgatacataaatg |
239 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
45937593 |
taaaaatttgaagttgatagttgattgatacataaatg |
45937556 |
T |
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