View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7947_low_48 (Length: 203)
Name: NF7947_low_48
Description: NF7947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7947_low_48 |
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Alignment Details
Target: chr3 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 27 - 185
Target Start/End: Complemental strand, 252979 - 252821
Alignment:
| Q |
27 |
tagggagctacataaaattaactaaatagttgcgctcaaagagttaatgatttcgaggtatattgtttgaattctttgaataatatcaaagttttttctt |
126 |
Q |
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| T |
252979 |
tagggagctacataaaattaactaaatagttgcgctcaaagagttaatgacttcgaggtatattgtttgaattctttgaataatatcaaagttttttctt |
252880 |
T |
|
| Q |
127 |
tgatagaaacagttttaactaatcatatttttaattaattttagattgaactccacatt |
185 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
252879 |
tgatagaaacagttttaactaatcatatttttaattacttttagattgaactccacatt |
252821 |
T |
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