View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7948_low_8 (Length: 291)

Name: NF7948_low_8
Description: NF7948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7948_low_8
NF7948_low_8
[»] chr8 (13 HSPs)
chr8 (72-278)||(29585565-29585771)
chr8 (181-267)||(18324064-18324150)
chr8 (180-266)||(25149365-25149451)
chr8 (181-265)||(23976219-23976302)
chr8 (180-267)||(37543918-37544005)
chr8 (185-265)||(31253977-31254055)
chr8 (180-252)||(21184365-21184436)
chr8 (180-255)||(21124393-21124468)
chr8 (180-263)||(22426912-22426995)
chr8 (180-235)||(41358840-41358895)
chr8 (185-255)||(21124430-21124500)
chr8 (180-267)||(4289051-4289138)
chr8 (185-259)||(31254007-31254081)
[»] chr7 (16 HSPs)
chr7 (180-267)||(27508642-27508729)
chr7 (180-267)||(38761118-38761205)
chr7 (182-267)||(45012974-45013059)
chr7 (180-267)||(6441470-6441557)
chr7 (181-267)||(5080235-5080321)
chr7 (184-267)||(14197585-14197668)
chr7 (191-267)||(37787813-37787889)
chr7 (185-259)||(27508679-27508753)
chr7 (180-259)||(43257366-43257445)
chr7 (185-259)||(5080211-5080285)
chr7 (180-264)||(3404524-3404607)
chr7 (212-267)||(14197617-14197672)
chr7 (193-255)||(38761098-38761160)
chr7 (185-259)||(45012950-45013024)
chr7 (180-217)||(15272389-15272426)
chr7 (185-241)||(6441464-6441520)
[»] chr3 (18 HSPs)
chr3 (180-267)||(48755393-48755480)
chr3 (181-267)||(15031255-15031341)
chr3 (180-267)||(1426550-1426637)
chr3 (196-267)||(11989171-11989242)
chr3 (180-267)||(14434766-14434853)
chr3 (181-268)||(15005025-15005112)
chr3 (181-267)||(21514811-21514897)
chr3 (182-268)||(33343074-33343159)
chr3 (180-267)||(18445531-18445618)
chr3 (180-259)||(26498650-26498729)
chr3 (185-267)||(15031291-15031373)
chr3 (181-266)||(43562727-43562812)
chr3 (185-259)||(15031323-15031397)
chr3 (180-217)||(20759103-20759140)
chr3 (185-241)||(1426587-1426643)
chr3 (185-245)||(33343108-33343168)
chr3 (180-236)||(38498201-38498257)
chr3 (180-220)||(42453109-42453149)
[»] chr1 (7 HSPs)
chr1 (180-267)||(50335507-50335594)
chr1 (180-267)||(37608038-37608125)
chr1 (180-267)||(13735511-13735598)
chr1 (211-267)||(32374092-32374148)
chr1 (180-267)||(8097841-8097928)
chr1 (185-256)||(50335544-50335615)
chr1 (185-259)||(37608075-37608149)
[»] chr4 (30 HSPs)
chr4 (181-267)||(30470944-30471030)
chr4 (182-268)||(2634149-2634235)
chr4 (180-267)||(18830700-18830787)
chr4 (180-267)||(47943574-47943661)
chr4 (180-267)||(55382682-55382769)
chr4 (181-268)||(1387467-1387555)
chr4 (181-269)||(5448263-5448351)
chr4 (180-267)||(10380721-10380808)
chr4 (180-267)||(3370031-3370118)
chr4 (180-267)||(9826698-9826785)
chr4 (188-267)||(18836405-18836483)
chr4 (213-267)||(10757696-10757750)
chr4 (213-267)||(10970867-10970921)
chr4 (185-269)||(1387402-1387486)
chr4 (181-265)||(2063213-2063297)
chr4 (180-267)||(11821789-11821876)
chr4 (180-259)||(22017984-22018063)
chr4 (185-259)||(18830676-18830750)
chr4 (180-266)||(37695059-37695145)
chr4 (185-267)||(47144760-47144842)
chr4 (185-258)||(10757673-10757746)
chr4 (185-258)||(10970844-10970917)
chr4 (180-260)||(30378808-30378888)
chr4 (188-259)||(18500704-18500775)
chr4 (181-268)||(2232496-2232582)
chr4 (188-259)||(10380697-10380768)
chr4 (185-259)||(2634126-2634200)
chr4 (181-263)||(5324813-5324895)
chr4 (176-221)||(2634132-2634177)
chr4 (181-250)||(8951131-8951200)
[»] scaffold0003 (2 HSPs)
scaffold0003 (180-265)||(314144-314229)
scaffold0003 (185-259)||(314181-314255)
[»] chr5 (12 HSPs)
chr5 (180-267)||(10760133-10760220)
chr5 (180-267)||(30100737-30100824)
chr5 (180-269)||(2555505-2555594)
chr5 (181-265)||(30852646-30852730)
chr5 (180-267)||(11298025-11298112)
chr5 (180-267)||(13753355-13753442)
chr5 (180-267)||(17497061-17497148)
chr5 (180-265)||(21943871-21943956)
chr5 (185-245)||(10760123-10760183)
chr5 (192-267)||(19491750-19491825)
chr5 (181-250)||(12895595-12895664)
chr5 (180-217)||(17497171-17497208)
[»] chr6 (12 HSPs)
chr6 (180-269)||(25089218-25089307)
chr6 (180-267)||(13536626-13536714)
chr6 (180-267)||(19295407-19295494)
chr6 (180-267)||(21222591-21222678)
chr6 (180-250)||(10588014-10588084)
chr6 (185-267)||(10862084-10862166)
chr6 (180-269)||(10672742-10672830)
chr6 (185-265)||(26705099-26705179)
chr6 (185-259)||(19295383-19295457)
chr6 (211-265)||(26705093-26705147)
chr6 (217-269)||(19295437-19295489)
chr6 (185-259)||(21222567-21222641)
[»] scaffold0407 (6 HSPs)
scaffold0407 (185-268)||(960-1043)
scaffold0407 (185-268)||(7424-7507)
scaffold0407 (180-269)||(991-1080)
scaffold0407 (180-269)||(7455-7544)
scaffold0407 (185-259)||(937-1011)
scaffold0407 (185-259)||(7401-7475)
[»] chr2 (11 HSPs)
chr2 (180-267)||(39598633-39598720)
chr2 (192-267)||(8219217-8219292)
chr2 (181-268)||(31499475-31499562)
chr2 (181-267)||(22092927-22093013)
chr2 (181-250)||(32092870-32092939)
chr2 (192-267)||(24007006-24007081)
chr2 (181-263)||(31819981-31820063)
chr2 (217-269)||(32092883-32092935)
chr2 (185-256)||(31820017-31820088)
chr2 (185-256)||(39598612-39598683)
chr2 (180-217)||(24006946-24006983)
[»] scaffold0102 (1 HSPs)
scaffold0102 (180-268)||(23958-24046)
[»] scaffold0066 (1 HSPs)
scaffold0066 (181-265)||(15432-15516)
[»] scaffold0024 (1 HSPs)
scaffold0024 (180-267)||(127870-127957)
[»] scaffold0026 (1 HSPs)
scaffold0026 (181-267)||(57516-57602)
[»] scaffold0049 (1 HSPs)
scaffold0049 (211-259)||(59807-59855)
[»] scaffold0011 (2 HSPs)
scaffold0011 (199-263)||(190308-190372)
scaffold0011 (185-259)||(190280-190354)
[»] scaffold1300 (1 HSPs)
scaffold1300 (205-267)||(1441-1503)
[»] scaffold0039 (1 HSPs)
scaffold0039 (212-269)||(27613-27670)


Alignment Details
Target: chr8 (Bit Score: 148; Significance: 4e-78; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 72 - 278
Target Start/End: Complemental strand, 29585771 - 29585565
Alignment:
Q  72 cttcacttcatataacctcgtatcac-tcaggcatgcatgcatgcataacgtttgaactaattgttttcttttcttggagattagtcacgtttgtagcta 170  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  29585771 cttcacttcctctaacctcgtatcacctcaggcatgcatgcatgcataacgtt-gaactaattgttttcttttcttggagattagtcacgttagtagcta 29585673  T
Q  171 aggagtcgtcaaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttcc 270  Q
    || | |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  |||| |||||||| |||||||||||||||||||    
T  29585672 agaaatcgtcaaaatagtccctgaatgtagactttgttattcaatttagtccctgaatgcagactttgttagtcaatttagtccctgaatgtagacttcc 29585573  T
Q  271 tctaatct 278  Q
    ||||||||    
T  29585572 tctaatct 29585565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 18324064 - 18324150
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||||||||||||||| ||| |||||||||| || ||||||| ||||||||| |||||||| ||| | ||||||||||    
T  18324064 aaaatagtccctgaatgtagactttattagtcaatttagttcctgaatgcaaactccgttagtcaatttagtccttaaatgtagact 18324150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 25149451 - 25149365
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagac 266  Q
    ||||||| || ||||||||||||||||||| ||||||||||| | |||||||||||| |||| |||| ||| |||||||| ||||||    
T  25149451 caaaataatctctgaatgtagactttgttagtcaatttagtctctgaatgcagactctgttagtcaagttagtccctgaacgtagac 25149365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 23976302 - 23976219
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtaga 265  Q
    |||||||||||||||||||| || ||||| ||||||||| ||| ||||||||||||||||  ||||||||  |||||||||||||    
T  23976302 aaaatagtccctgaatgtag-ctctgttagtcaatttagcccctgaatgcagactccgttggtcaatttagcccctgaatgtaga 23976219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 37544005 - 37543918
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||  ||| |||||||||||||| |||||||| |||| ||||||||| ||||||| | |||||| ||||||||| ||||||    
T  37544005 caaaatagtcattgattgtagactttgttagtcaatttaatccctgaatgcagattccgttagttaatttagtccctgaatatagact 37543918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 31253977 - 31254055
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtaga 265  Q
    |||||| ||||||||||||  |||| ||||||||||||| |||||||||||| |||| |||||||| ||||| ||||||||    
T  31253977 tagtccatgaatgtagact--gttagtcaatttagtccctgaatgcagactctgttagtcaatttagtccctaaatgtaga 31254055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 21184365 - 21184436
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaat 252  Q
    ||||||||||||||||| || ||||  ||| ||||||||||||| |||| |||||||||||||||||||||||    
T  21184365 caaaatagtccctgaatataaactta-ttagtcaatttagtccctgaatacagactccgttaatcaatttaat 21184436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 21124393 - 21124468
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccc 255  Q
    |||||||||| || |||||||||| | ||| ||||||||||||| ||||||||||| ||||| |||||||| ||||    
T  21124393 caaaatagtctctaaatgtagactctattagtcaatttagtccctgaatgcagacttcgttagtcaatttagtccc 21124468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 263
Target Start/End: Original strand, 22426912 - 22426995
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgta 263  Q
    ||||||||||||||||||||| || ||||| ||||||||||||| ||||| || |||  ||| |||||||  ||||||||||||    
T  22426912 caaaatagtccctgaatgtagtctctgttagtcaatttagtccctgaatgtagtctcttttagtcaatttggtccctgaatgta 22426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 41358895 - 41358840
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagact 235  Q
    |||||||||||||||||||||||| ||||| ||||||||||||  |||||||||||    
T  41358895 caaaatagtccctgaatgtagactctgttaatcaatttagtccatgaatgcagact 41358840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 21124430 - 21124500
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccc 255  Q
    ||||||||||||| |||||| |||| |||||||||||||| | || ||||||||||| |||||||| ||||    
T  21124430 tagtccctgaatgcagacttcgttagtcaatttagtcccctagtgtagactccgttagtcaatttagtccc 21124500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 4289138 - 4289051
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||  |||| | ||||| ||||| ||||||||||| |  ||||||||||  ||||||||||||| ||  ||||||||||||    
T  4289138 caaaatagtctttgaacgcagactatgttagtcaatttagtctctaaatgcagactatgttaatcaatttagtctttgaatgtagact 4289051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 31254007 - 31254081
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| ||||| ||||| |||||||||||||  |||| ||| |  |||| ||| |||||||||||||    
T  31254007 tagtccctgaatgcagactctgttagtcaatttagtccctaaatgtagattttgttagtcactttaatccctgaa 31254081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 27508642 - 27508729
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||||    
T  27508642 caaaatagtccctgaatgtagactatgttagtcaatttagtccctgaatgcagactctgttagtcaatttagtccctgaatgtagact 27508729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 38761205 - 38761118
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||||||| |||||||||| |||||    
T  38761205 caaaatagtccctgaatgtagactttgttaatcaatttagtcctcgaatgcagactctgttagtcaatttagtccctgaatgcagact 38761118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 45013059 - 45012974
Alignment:
Q  182 aaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||| |||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  45013059 aaatagttcctgaatgtagagtttgttagtcaatttagtccctgaatgcagactccgttagtcaatttaatctctgaatgtagact 45012974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 6441557 - 6441470
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| |||| |||||||| || || ||||||||||    
T  6441557 caaaataatccctgaatgtagactttgttagtcaatttagtccctgaatgcagactctgttagtcaatttagtctctaaatgtagact 6441470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 5080321 - 5080235
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||| ||||||||| ||| | ||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  5080321 aaaatagtctctgaatgtaaactatattagtcaatttagtccctgaatgcagactccgttaatcaatttagtacctgaatgtagact 5080235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 14197668 - 14197585
Alignment:
Q  184 atagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||| |||||||| || || ||||||||||    
T  14197668 atagtccctgaatgtagactctgttagtcaatttaatccctgaatgcagactccgttagtcaatttagtctctcaatgtagact 14197585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 37787889 - 37787813
Alignment:
Q  191 ctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||| |||| |||||||| ||  ||||||||||||    
T  37787889 ctgaatgtagactttgttagtcaatttagtccctgaatgcatactctgttagtcaatttagtcgttgaatgtagact 37787813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 27508679 - 27508753
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||||||| ||| |||| ||| ||||    
T  27508679 tagtccctgaatgcagactctgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccatgaa 27508753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 43257445 - 43257366
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||||||  |||| ||||| ||||| |||||||| ||||||||    
T  43257445 caaaataatccttgaatatagactctgttagtcaatttagtccctaaatgtagacttcgttagtcaatttactccctgaa 43257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 5080285 - 5080211
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| |||||  |||| |||||||||| || ||||| ||||||||||||||| |||| ||| ||||    
T  5080285 tagtccctgaatgcagactccgttaatcaatttagtacctgaatgtagactccgttaatcattttagtccttgaa 5080211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 3404524 - 3404607
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtag 264  Q
    |||| |||||| |||||||| ||| ||||| |||||||||||||  ||||||| ||| |||| |||||||| ||||||| |||||    
T  3404524 caaagtagtccatgaatgtacactctgttagtcaatttagtccctaaatgcag-ctctgttagtcaatttagtccctgagtgtag 3404607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 14197672 - 14197617
Alignment:
Q  212 caatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||| ||||||| ||||| |||||| |||| ||||||||||||||||||| |||||    
T  14197672 caatatagtccctgaatgtagactctgttagtcaatttaatccctgaatgcagact 14197617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 38761160 - 38761098
Alignment:
Q  193 gaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccc 255  Q
    ||||| ||||| ||||| ||||||||||||| |||||||||||| |||| ||| |||| ||||    
T  38761160 gaatgcagactctgttagtcaatttagtccctgaatgcagactctgttagtcactttagtccc 38761098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 45013024 - 45012950
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| |||||  |||| |||||||| || | ||||| |||||||| |||||| |||| ||||||||    
T  45013024 tagtccctgaatgcagactccgttagtcaatttaatctctgaatgtagactccgctaatcactttagtccctgaa 45012950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 15272389 - 15272426
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaattt 217  Q
    |||||||||||||||||||||||||||||  |||||||    
T  15272389 caaaatagtccctgaatgtagactttgttggtcaattt 15272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 6441520 - 6441464
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgtta 241  Q
    ||||||||||||| ||||| ||||| ||||||||||| |  |||| |||||||||||    
T  6441520 tagtccctgaatgcagactctgttagtcaatttagtctctaaatgtagactccgtta 6441464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 48755393 - 48755480
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||    
T  48755393 caaaatagtccctgaatgtagactctgttagtcaatttagtccctgaatgcagactccgttagtcaatttagtccatgaatgtagact 48755480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 15031255 - 15031341
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||||| |||||||| || |||||||||||||    
T  15031255 aaaatagtccctgaatgtagactctgttagtcaatttagtccctgaatgcaaactccgttagtcaatttagtcactgaatgtagact 15031341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 1426550 - 1426637
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||| |||||||||||| | ||||| ||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||    
T  1426550 caaaatagttcctgaatgtagattatgttagtcaatttagtccctgaatgcagactccgttagtcaatttagtccctaaatgtagact 1426637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 11989242 - 11989171
Alignment:
Q  196 tgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||| ||| | ||||||||||    
T  11989242 tgtagactctgttagtcaatctagtccctgaatgcagactccgttaatcaatttagtccttaaatgtagact 11989171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 14434853 - 14434766
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||| ||||||| |||| | || | |||||| || |||||||||||||    
T  14434853 caaaatagtccatgaatgtagactctgttagtcaatttagtccctgaatgcaaactcagatagttaatttagtctctgaatgtagact 14434766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 15005025 - 15005112
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagactt 268  Q
    |||||||||| |||||||||||| ||||| |||||||| |||| |||||||||||| |||| | |||||| ||| |||||||| ||||    
T  15005025 aaaatagtccttgaatgtagactctgttagtcaatttaatccctgaatgcagactcagttagttaatttagtccttgaatgtatactt 15005112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 21514811 - 21514897
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||| |||||||||||| ||||| | ||||||||||| |||||| |||| ||||| |||||||| ||| ||||||| ||||    
T  21514811 aaaatagtccttgaatgtagactctgttagttaatttagtccctgaatgcggacttcgttagtcaatttagtccttgaatgtggact 21514897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 33343074 - 33343159
Alignment:
Q  182 aaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagactt 268  Q
    |||| ||||||||||||||||| ||||| |||||| |||||| ||||||| |||  |||| |||||||| |||||||||||||||||    
T  33343074 aaatggtccctgaatgtagactatgttagtcaatt-agtccctgaatgcaaactatgttagtcaatttagtccctgaatgtagactt 33343159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 18445618 - 18445531
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||  ||||||||| ||| ||||| |||| |||||  | ||||||||||| ||||||||||||||||||| |||| ||||||    
T  18445618 caaaatagtttctgaatgtatactatgttagtcaacttagtatctgaatgcagacttcgttaatcaatttaatcccagaatttagact 18445531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 26498729 - 26498650
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||| ||||||||||||  |||| ||||||||||| | ||||||| ||||||||| ||| |||| ||||||||    
T  26498729 caaaatagtccatgaatgtagactcggttagtcaatttagtcactgaatgcatactccgttagtcactttagtccctgaa 26498650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 15031291 - 15031373
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||| | |||  |||| ||||||||||| | ||||| ||||||||||| |||||||| || |||||||||||||    
T  15031291 tagtccctgaatgcaaactccgttagtcaatttagtcactgaatgtagactccgttagtcaatttagtcactgaatgtagact 15031373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 43562812 - 43562727
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagac 266  Q
    |||||||||| |||||||||| | ||||  |||||||| ||   ||||||||||| | ||| ||||||||||||||||||||||||    
T  43562812 aaaatagtccttgaatgtagattctgtttgtcaatttaatcgttgaatgcagacttcattagtcaatttaatccctgaatgtagac 43562727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 15031323 - 15031397
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||| |||||||||||||  |||| ||||||||||| | ||||| ||||||||||| ||| |||| ||||||||    
T  15031323 tagtcactgaatgtagactccgttagtcaatttagtcactgaatgtagactccgttagtcactttagtccctgaa 15031397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 20759140 - 20759103
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaattt 217  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  20759140 caaaatagtccttgaatgtagactttgttagtcaattt 20759103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 1426587 - 1426643
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgtta 241  Q
    ||||||||||||| |||||  |||| |||||||||||||  |||| |||||||||||    
T  1426587 tagtccctgaatgcagactccgttagtcaatttagtccctaaatgtagactccgtta 1426643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 33343108 - 33343168
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatca 245  Q
    ||||||||||||| | ||| ||||| ||||||||||||| ||||| |||||  ||||||||    
T  33343108 tagtccctgaatgcaaactatgttagtcaatttagtccctgaatgtagactttgttaatca 33343168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 38498201 - 38498257
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactc 236  Q
    ||||||||||| | ||| || ||||||||| ||||||||||||| ||||| ||||||    
T  38498201 caaaatagtccataaatataaactttgttagtcaatttagtccctgaatgtagactc 38498257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 42453109 - 42453149
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagt 220  Q
    ||||||||||||| |||||||||| ||||| ||||||||||    
T  42453109 caaaatagtccctaaatgtagactctgttagtcaatttagt 42453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 50335507 - 50335594
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||  |||||||| ||||||||||||||||    
T  50335507 caaaatagtccatgaatgtagactttgttagtcaatttagtccctgaatgcagactccgttcgtcaatttagtccctgaatgtagact 50335594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 37608038 - 37608125
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||  |||||||||||| |||| |||||||| ||| ||||||||||||    
T  37608038 caaaatagtccttgaatgtagactctgttagtcaatttagtccttgaatgcagactctgttagtcaatttagtccttgaatgtagact 37608125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 13735511 - 13735598
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||  |||||||||| ||||| ||||||||||| | ||||||||||||||||| |||||||| ||  | ||||||||||    
T  13735511 caaaatagtcccacaatgtagactctgttagtcaatttagtctctgaatgcagactccgttagtcaatttagtcaataaatgtagact 13735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 32374148 - 32374092
Alignment:
Q  211 tcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||| ||||||| |||| |||| |||||||| ||||||||||||||||    
T  32374148 tcaatttagtccctgaatgcaaactctgttagtcaatttagtccctgaatgtagact 32374092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 8097928 - 8097841
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||| ||||| |||| | ||||| ||||||||||||  |||| || ||||| ||| |||||||| | ||||||||||||||    
T  8097928 caaaatagtccatgaatatagattctgttagtcaatttagtccttgaatacatactccattagtcaatttagttcctgaatgtagact 8097841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 50335544 - 50335615
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccct 256  Q
    ||||||||||||| |||||  |||  ||||||||||||| ||||| |||||||| |||||| |||| |||||    
T  50335544 tagtccctgaatgcagactccgttcgtcaatttagtccctgaatgtagactccgctaatcactttagtccct 50335615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 37608075 - 37608149
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    |||||| |||||| ||||| ||||| ||||||||||||  ||||| ||||||||||| ||| |||  ||||||||    
T  37608075 tagtccttgaatgcagactctgttagtcaatttagtccttgaatgtagactccgttagtcactttggtccctgaa 37608149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 30471030 - 30470944
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  30471030 aaaatagtccctgaatgtagactatgttaatcaatttagtccctgaatgcagactccgttaatcaatttagtcattgaatgtagact 30470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 2634235 - 2634149
Alignment:
Q  182 aaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagactt 268  Q
    |||||||| ||||||||||||| ||||| ||||||||||||| |||||||||||| |||  |||||||| |||||||||||||||||    
T  2634235 aaatagtctctgaatgtagactctgttagtcaatttagtccctgaatgcagactctgttcgtcaatttagtccctgaatgtagactt 2634149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 18830787 - 18830700
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||| |||||||||| | ||||| || |||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||    
T  18830787 caaaatagtccttgaatgtagattctgttagtccatttagtccctgaatgcagacttcgttagtcaatttagtccctgaatgtagact 18830700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 47943661 - 47943574
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||||||||||||||| |||| |||||||||| |  ||||||||   |||||| |||||||||||||||||||||||||    
T  47943661 caaaatagtccctgaatgtagacttggttagtcaatttagttcttgaatgcaggaaccgttagtcaatttaatccctgaatgtagact 47943574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 55382769 - 55382682
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||  |||||||| ||||||| |||||||| |||||| |||||||||    
T  55382769 caaaatagtctctgaatgtagactttgttagtcaattttgtccctaaatgcagattccgttagtcaatttagtccctggatgtagact 55382682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 1387555 - 1387467
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtcccc-gaatgcagactccgttaatcaatttaatccctgaatgtagactt 268  Q
    |||||| |||||||||||||| ||||||  |||||||||||||| |||||||||||| |||| |||||||| || ||||||||||||||    
T  1387555 aaaatattccctgaatgtagattttgttcatcaatttagtcccctgaatgcagactctgttagtcaatttagtcgctgaatgtagactt 1387467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 5448263 - 5448351
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    ||||||| ||||||||||| ||| ||||| ||||||||||||| | ||||||||||||||  |||||||| ||||||||| ||||||||    
T  5448263 aaaatagcccctgaatgtaaactctgttagtcaatttagtccctggatgcagactccgttggtcaatttagtccctgaatatagacttc 5448351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 10380808 - 10380721
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||| || |||||||||| ||||| |||||||| |||| ||||||||||| ||||| |||||||| ||||| ||||||||||    
T  10380808 caaaatagtctctaaatgtagactctgttagtcaatttaatccctgaatgcagacttcgttagtcaatttagtccctaaatgtagact 10380721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 3370031 - 3370118
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||  | |||||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| || || ||||||||||    
T  3370031 caaaatagtcattaaatgtagactctgttagtcaatttagtccctgaatgcagacttcgttagtcaatttagtctcttaatgtagact 3370118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 9826698 - 9826785
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||  ||||||||| ||| ||||| |||| |||||  | ||||||||||| |||||||||||||||||||||||| ||||||    
T  9826698 caaaatagtttctgaatgtatactatgttagtcaacttagtatctgaatgcagacttcgttaatcaatttaatccctgaatttagact 9826785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 18836483 - 18836405
Alignment:
Q  188 tccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||| ||||||| ||||| || |||||||||| ||||||||||||||||| || ||||| ||||||||||||||||    
T  18836483 tccctgaacgtagactctgttagtccatttagtccctgaatgcagactccgttagtc-atttagtccctgaatgtagact 18836405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 10757750 - 10757696
Alignment:
Q  213 aatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  10757750 aatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagact 10757696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 10970921 - 10970867
Alignment:
Q  213 aatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  10970921 aatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagact 10970867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 1387486 - 1387402
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    ||||| ||||||||||||||||||| ||| |||||| || ||||||| || |||||| |||||||| | || |||||||||||||    
T  1387486 tagtcgctgaatgtagactttgttagtcactttagttcctgaatgcaaaccccgttagtcaatttagttccggaatgtagacttc 1387402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 2063213 - 2063297
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtaga 265  Q
    |||||||||  |||||||| ||| ||||| ||||||||||| | ||||||| ||||||||| |||||||| ||||| ||||||||    
T  2063213 aaaatagtcattgaatgtaaactatgttagtcaatttagtctctgaatgcaaactccgttagtcaatttagtccctaaatgtaga 2063297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 11821789 - 11821876
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||  |||||||||||| ||||| | ||||||||||| ||||||||| | ||||| |||||||| ||  ||||||||||||    
T  11821789 caaaatagtctttgaatgtagactctgttagttaatttagtccctgaatgcagatttcgttagtcaatttagtctatgaatgtagact 11821876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 22018063 - 22017984
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    |||||||||||||||||||||||| ||||| || |||||||| | ||||| | ||||||||||||| |||| ||| ||||    
T  22018063 caaaatagtccctgaatgtagactatgttagtctatttagtctctgaatgtatactccgttaatcactttagtccttgaa 22017984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 18830750 - 18830676
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| |||||| |||| ||||||||||||| ||||| ||||||| ||| ||| |||| ||||||||    
T  18830750 tagtccctgaatgcagacttcgttagtcaatttagtccctgaatgtagactccattagtcactttagtccctgaa 18830676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 37695145 - 37695059
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagac 266  Q
    ||||||| || ||||||||||||| ||||| |||||||| ||   |||||||||||| |||| |||||||||||||| |||| ||||    
T  37695145 caaaataatctctgaatgtagactctgttagtcaatttaatcgttgaatgcagactctgttagtcaatttaatccctaaatgcagac 37695059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 47144760 - 47144842
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||| ||||||||||||||  |||| ||||||||||||  ||||  |||||||||||||||||||| | |||||||| |||||    
T  47144760 tagttcctgaatgtagactcagttagtcaatttagtccttgaataaagactccgttaatcaatttagttcctgaatgcagact 47144842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 10757746 - 10757673
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctga 258  Q
    ||||||||||||| |||||  |||| ||||||||||||| ||||| |||||| |||||||| | ||||||||||    
T  10757746 tagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactctgttaatcactataatccctga 10757673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 10970917 - 10970844
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctga 258  Q
    ||||||||||||| |||||  |||| ||||||||||||| ||||| |||||| |||||||| | ||||||||||    
T  10970917 tagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactctgttaatcactataatccctga 10970844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 30378808 - 30378888
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaat 260  Q
    |||||||||| ||||||| ||||| ||||| |||||| |||| | |||||||||||| |||| |||||| | |||||||||    
T  30378808 caaaatagtctctgaatgcagactctgttagtcaattcagtctctgaatgcagactctgttagtcaattcagtccctgaat 30378888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 18500704 - 18500775
Alignment:
Q  188 tccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    |||||||||||||||| ||||| ||||||||||||| ||||  |||||| |||||||| |||| || |||||    
T  18500704 tccctgaatgtagactctgttagtcaatttagtccctgaatttagactctgttaatcactttagtctctgaa 18500775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 2232582 - 2232496
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagactt 268  Q
    |||||||||| | |||||||||| ||||| |||||||| |||| |  || |||||| ||||  ||||||| |||||||||||||||||    
T  2232582 aaaatagtccttcaatgtagactatgttagtcaatttaatccctggttg-agactctgttagccaatttagtccctgaatgtagactt 2232496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 10380768 - 10380697
Alignment:
Q  188 tccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    |||||||||| |||||| |||| |||||||||||||  |||| |||||| |||| ||| |||| ||||||||    
T  10380768 tccctgaatgcagacttcgttagtcaatttagtccctaaatgtagactcagttagtcactttagtccctgaa 10380697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 2634200 - 2634126
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| ||||| ||||  ||||||||||||| ||||| |||||  |||||||| |||| || |||||    
T  2634200 tagtccctgaatgcagactctgttcgtcaatttagtccctgaatgtagactttgttaatcactttagtcgctgaa 2634126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 5324895 - 5324813
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgta 263  Q
    ||||||||  |||| || ||||| ||||| |||||||||| |  |||||||||||| |||| |||||||| ||| ||||||||    
T  5324895 aaaatagtttctgattgcagactctgttagtcaatttagttcatgaatgcagactctgttagtcaatttagtccttgaatgta 5324813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 2634177 - 2634132
Alignment:
Q  176 tcgtcaaaatagtccctgaatgtagactttgttactcaatttagtc 221  Q
    |||||||  ||||||||||||||||||||||||| ||| |||||||    
T  2634177 tcgtcaatttagtccctgaatgtagactttgttaatcactttagtc 2634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 8951200 - 8951131
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaattta 250  Q
    |||||||| |||||||||||| ||||||| |||||||||| ||  |||| ||||| ||||| ||| ||||    
T  8951200 aaaatagttcctgaatgtagattttgttagtcaatttagttccttaatgtagacttcgttagtcatttta 8951131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 314144 - 314229
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtaga 265  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  314144 caaaatagtccctaaatgtagactctgttagtcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtaga 314229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 314181 - 314255
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| |||||  |||| ||||||||||||| ||||| ||| || |||| ||| |||| ||||||||    
T  314181 tagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagagtctgttagtcactttagtccctgaa 314255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 10760220 - 10760133
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  10760220 caaaatagtccctaaatgtagactctgtaagtcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagact 10760133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 30100824 - 30100737
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||| |||||| ||||| ||||| ||| ||||||||| ||||||||||||| ||| ||||| || ||||||||||||||||    
T  30100824 caaaatagtccatgaatgcagactctgttaatcactttagtccctgaatgcagactccattagtcaatatagtccctgaatgtagact 30100737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 2555505 - 2555594
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    |||||||||| ||||||||||||| ||||| |||||||||||   ||||||||||| ||||| |||| ||| |||||||| |||||||||    
T  2555505 caaaatagtctctgaatgtagactctgttagtcaatttagtcgttgaatgcagacttcgttagtcaaattagtccctgaacgtagacttc 2555594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 30852646 - 30852730
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtaga 265  Q
    |||||||| |||||||||| ||| ||||| ||||||||||||| ||||||||||| ||| | |||||||| || |||||||||||    
T  30852646 aaaatagttcctgaatgtaaactctgttagtcaatttagtccctgaatgcagacttcgtaagtcaatttagtctctgaatgtaga 30852730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 11298025 - 11298112
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||| ||||||||  |||||| ||||| ||||||||||| | ||||||||||||| ||| |||||||| | ||||||||||||||    
T  11298025 caaaataatccctgaacatagactctgttagtcaatttagtctctgaatgcagactccattagtcaatttagttcctgaatgtagact 11298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 13753442 - 13753355
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||| |||||||||| ||| | ||||||||||||   |||||||||||||||| ||||||||  ||||||| |||||||    
T  13753442 caaaatagtccctaaatgtagactctgtaagtcaatttagtccttaaatgcagactccgttagtcaatttagcccctgaaagtagact 13753355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 17497061 - 17497148
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||| ||||||||| || ||||| ||||||||||||  ||||||||| || |||| | |||||| ||||||||||||||||    
T  17497061 caaaatagtccgtgaatgtagtctctgttagtcaatttagtccttgaatgcagattctgttagttaatttagtccctgaatgtagact 17497148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 21943956 - 21943871
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtaga 265  Q
    ||||||||| | |||||||||||| ||||| ||||||||||||| ||||||| |||  |||| |||||||| ||  ||||||||||    
T  21943956 caaaatagttcatgaatgtagactctgttaatcaatttagtccctgaatgcatactttgttagtcaatttagtctttgaatgtaga 21943871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 10760183 - 10760123
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatca 245  Q
    ||||||||||||| |||||  |||| ||||||||||||| ||||| |||||||||||||||    
T  10760183 tagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactccgttaatca 10760123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 19491750 - 19491825
Alignment:
Q  192 tgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||| ||| ||||| |||| |||||  | ||||||||||| |||||||||||||| ||||||||| ||||||    
T  19491750 tgaatgtatactatgttagtcaacttagtatctgaatgcagacttcgttaatcaatttagtccctgaatttagact 19491825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 12895595 - 12895664
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaattta 250  Q
    ||||||||| | ||||||||||||||||| |||||||| |||   ||||||||||| |||| ||||||||    
T  12895595 aaaatagtctccgaatgtagactttgttagtcaatttaatccttaaatgcagactctgttagtcaattta 12895664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 17497208 - 17497171
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaattt 217  Q
    |||||||||||||||||||||||||||||  |||||||    
T  17497208 caaaatagtccctgaatgtagactttgttggtcaattt 17497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 25089218 - 25089307
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    |||||||||||||||||||||||| ||||| |||||||||||   ||||||||||||| ||| |||||||| ||||||||||||||||||    
T  25089218 caaaatagtccctgaatgtagactctgttagtcaatttagtcattgaatgcagactccattagtcaatttagtccctgaatgtagacttc 25089307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 13536626 - 13536714
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaattta-atccctgaatgtagact 267  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||   |||||||||||||||    
T  13536626 caaaatagtccctgaatgtagactctgttagtcaatttagtccctgaatgcagactccgttagtcaatttagccccctgaatgtagact 13536714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 19295494 - 19295407
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||| | ||| |||||||| ||||||||||||||||    
T  19295494 caaaatagtccctgaatgcagactctgttagtcaatttagtccctgaatgcagacttcattagtcaatttagtccctgaatgtagact 19295407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 21222678 - 21222591
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||| ||||||||| ||| ||||| |||| |||||| | ||||||||||| ||||| |||||||| ||||||||||||||||    
T  21222678 caaaatagtctctgaatgtatactatgttagtcaacttagtctctgaatgcagacttcgttagtcaatttagtccctgaatgtagact 21222591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 10588084 - 10588014
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaattta 250  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||  ||||||||||||||||| ||||||||    
T  10588084 caaaatagtccatgaatgtagactttattagtcaatttagtccttgaatgcagactccgttagtcaattta 10588014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 10862084 - 10862166
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||||||||| ||||| |||||| | |||| ||| ||||||||||||| |||||||| ||||||||| ||||||    
T  10862084 tagtccctgaatgtagactctgttagtcaattcaatccctgaaggcagactccgttagtcaatttagtccctgaatatagact 10862166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 10672830 - 10672742
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    ||||||||| |||||||||||| ||||||| ||||||||||| | ||||||| | | ||||| |||||||| ||||||||||||||||||    
T  10672830 caaaatagttcctgaatgtaga-tttgttaatcaatttagtctctgaatgcatatttcgttagtcaatttagtccctgaatgtagacttc 10672742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 26705099 - 26705179
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtaga 265  Q
    ||||||||||||| ||| || |||| ||||||||||||| ||||  ||| ||||||| |||||||| ||||||||||||||    
T  26705099 tagtccctgaatgcagatttcgttaatcaatttagtccctgaatatagaatccgttagtcaatttagtccctgaatgtaga 26705179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 19295457 - 19295383
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| ||||||  ||| ||||||||||||| ||||| ||||||||||  ||| |||| ||||||||    
T  19295457 tagtccctgaatgcagacttcattagtcaatttagtccctgaatgtagactccgttggtcactttagtccctgaa 19295383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 26705093 - 26705147
Alignment:
Q  211 tcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtaga 265  Q
    ||||||||||||| ||||||||| | |||||||||||||| ||||||||| ||||    
T  26705093 tcaatttagtccctgaatgcagatttcgttaatcaatttagtccctgaatataga 26705147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 19295489 - 19295437
Alignment:
Q  217 tagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    ||||||| |||||||||||| |||| |||||||| |||||||||| |||||||    
T  19295489 tagtccctgaatgcagactctgttagtcaatttagtccctgaatgcagacttc 19295437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 21222641 - 21222567
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||| ||||||| |||||| |||| ||||||||||||| ||||| |||||| |||| |||  ||||||| ||||    
T  21222641 tagtctctgaatgcagacttcgttagtcaatttagtccctgaatgtagactcagttagtcacattaatccttgaa 21222567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 56; Significance: 3e-23; HSPs: 6)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 1043 - 960
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagactt 268  Q
    ||||||||||||| ||| || |||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  1043 tagtccctgaatgcagatttcgttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactt 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 7507 - 7424
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagactt 268  Q
    ||||||||||||| ||| || |||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  7507 tagtccctgaatgcagatttcgttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactt 7424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 1080 - 991
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | ||||| |||||||| |||||||||| |||||||    
T  1080 caaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatttagtccctgaatgcagacttc 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 7544 - 7455
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | ||||| |||||||| |||||||||| |||||||    
T  7544 caaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatttagtccctgaatgcagacttc 7455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 1011 - 937
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| |||||| |||| |||||||| |||| ||||| |||||  |||| ||| |||| ||||||||    
T  1011 tagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaa 937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 7475 - 7401
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| |||||| |||| |||||||| |||| ||||| |||||  |||| ||| |||| ||||||||    
T  7475 tagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaa 7401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 39598720 - 39598633
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||||||||||||||||||||||  ||||||||||| | ||||| | ||||||||| |||||||| ||||||||||||||||    
T  39598720 caaaatagtccctgaatgtagactttgttggtcaatttagtcgctgaatgtatactccgttagtcaatttagtccctgaatgtagact 39598633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 8219217 - 8219292
Alignment:
Q  192 tgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||||| ||||| ||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||    
T  8219217 tgaatgtagactctgttagtcaatttagtttctgaatgcagactccgttagtcaatttaatccctgaatgtggact 8219292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 31499562 - 31499475
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagactt 268  Q
    ||||||||||||||||||||| | ||||| ||| ||||||  | ||||||||||||||||| |||||||| ||| |||||||||||||    
T  31499562 aaaatagtccctgaatgtagaatctgttagtcattttagtttctgaatgcagactccgttagtcaatttagtccttgaatgtagactt 31499475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 22092927 - 22093013
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||||||||||||||||| ||||| ||| |||||| || ||||||||||||| ||  |||||||| ||||||||| ||||||    
T  22092927 aaaatagtccctgaatgtagactctgttagtcagtttagttcctgaatgcagactccattcgtcaatttagtccctgaatatagact 22093013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 32092939 - 32092870
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaattta 250  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||| ||||| ||| ||||    
T  32092939 aaaatagtccctgaatgtagactctgttagtcaatttagtccctgaatgtagacttcgttagtcacttta 32092870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 24007081 - 24007006
Alignment:
Q  192 tgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||||| ||||| ||||||||||||  ||||||||| |||||| |||||| || | ||||||||||||||    
T  24007081 tgaatgtagactctgttagtcaatttagtccatgaatgcagattccgttgatcaatgtagtacctgaatgtagact 24007006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 31819981 - 31820063
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgta 263  Q
    ||||||||| ||||||||||||| ||||| || |||||||||  |||||||||||   ||| |||||||| || |||||||||    
T  31819981 aaaatagtcactgaatgtagactctgttagtccatttagtccttgaatgcagactttcttagtcaatttagtctctgaatgta 31820063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 32092935 - 32092883
Alignment:
Q  217 tagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    ||||||| ||||| |||||| |||| |||||||| ||||||||||||||||||    
T  32092935 tagtccctgaatgtagactctgttagtcaatttagtccctgaatgtagacttc 32092883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 31820017 - 31820088
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccct 256  Q
    |||||| |||||| ||||||| ||| ||||||||||| | ||||| | ||||||||||||| |||| |||||    
T  31820017 tagtccttgaatgcagactttcttagtcaatttagtctctgaatgtatactccgttaatcactttagtccct 31820088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 39598683 - 39598612
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccct 256  Q
    ||||| ||||||||| |||  |||| ||||||||||||| ||||| ||||||||||| ||| |||| |||||    
T  39598683 tagtcgctgaatgtatactccgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccct 39598612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 24006946 - 24006983
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaattt 217  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  24006946 caaaacagtccctgaatgtagactctgttactcaattt 24006983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 23958 - 24046
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagactt 268  Q
    |||||| ||||| |||||||||||  |||| ||||||||||||| |||||||||||| |||  |||||||| ||| |||||||||||||    
T  23958 caaaatggtccccgaatgtagactacgttagtcaatttagtccctgaatgcagactctgttggtcaatttagtccttgaatgtagactt 24046  T

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Target: scaffold0066 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 15432 - 15516
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtaga 265  Q
    ||||||||| ||||||||||||| ||||| |||||||| || | ||||| |||||||||||  ||||||| || |||||||||||    
T  15432 aaaatagtctctgaatgtagactctgttagtcaatttaatctctgaatgtagactccgttagccaatttagtctctgaatgtaga 15516  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 127870 - 127957
Alignment:
Q  180 caaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    |||||||||  ||||||||| ||| ||||| |||| |||||  | ||||||||||| ||||||||||||||||||| |||| ||||||    
T  127870 caaaatagtttctgaatgtatactatgttagtcaacttagtatctgaatgcagacttcgttaatcaatttaatcccagaatttagact 127957  T

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Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 57516 - 57602
Alignment:
Q  181 aaaatagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||||||  ||||||||| ||| ||||| |||| |||||  | ||||||||||| |||||||||||||| ||||||||| ||||||    
T  57516 aaaatagtttctgaatgtatactatgttagtcaacttagtatctgaatgcagacttcgttaatcaatttagtccctgaatttagact 57602  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 59855 - 59807
Alignment:
Q  211 tcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  59855 tcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaa 59807  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 190372 - 190308
Alignment:
Q  199 agactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgta 263  Q
    ||||||||||| |||||||||| || |||| ||||||| |||| |||||||| ||||| ||||||    
T  190372 agactttgttagtcaatttagttcctgaatacagactctgttagtcaatttagtccctaaatgta 190308  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 190354 - 190280
Alignment:
Q  185 tagtccctgaatgtagactttgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaa 259  Q
    |||| |||||||  ||||| ||||| |||||||||||||  |||| | |||  ||||||||||||||||||||||    
T  190354 tagttcctgaatacagactctgttagtcaatttagtccctaaatgtaaactatgttaatcaatttaatccctgaa 190280  T

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Target: scaffold1300 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 1441 - 1503
Alignment:
Q  205 tgttactcaatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagact 267  Q
    ||||| |||| |||||| | ||||||||||| ||||| | |||||| ||||||||||||||||    
T  1441 tgttaatcaacttagtctctgaatgcagacttcgttagttaatttagtccctgaatgtagact 1503  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 27670 - 27613
Alignment:
Q  212 caatttagtccccgaatgcagactccgttaatcaatttaatccctgaatgtagacttc 269  Q
    |||||||||||| |||| || || |||||| |||||||| | ||||||||||||||||    
T  27670 caatttagtccctgaatacataccccgttagtcaatttacttcctgaatgtagacttc 27613  T

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