View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7950_high_1 (Length: 714)

Name: NF7950_high_1
Description: NF7950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7950_high_1
NF7950_high_1
[»] chr6 (6 HSPs)
chr6 (20-712)||(14686621-14687313)
chr6 (455-527)||(26513744-26513816)
chr6 (274-353)||(14844004-14844083)
chr6 (59-133)||(25350636-25350710)
chr6 (110-142)||(14843840-14843872)
chr6 (270-304)||(5085889-5085923)
[»] chr7 (5 HSPs)
chr7 (141-712)||(26855548-26856119)
chr7 (449-531)||(35213649-35213731)
chr7 (61-142)||(20349369-20349450)
chr7 (458-529)||(44433425-44433496)
chr7 (455-525)||(4077297-4077367)
[»] chr4 (8 HSPs)
chr4 (235-712)||(20543920-20544396)
chr4 (265-712)||(43516588-43517035)
chr4 (18-219)||(43516359-43516560)
chr4 (455-540)||(19120084-19120169)
chr4 (270-304)||(8935318-8935352)
chr4 (270-304)||(23657638-23657672)
chr4 (270-304)||(29553603-29553637)
chr4 (265-310)||(46543216-46543261)
[»] chr2 (4 HSPs)
chr2 (18-680)||(11196218-11196880)
chr2 (365-689)||(32624212-32624536)
chr2 (583-712)||(144200-144329)
chr2 (455-529)||(18634920-18634994)
[»] chr5 (5 HSPs)
chr5 (449-712)||(21367960-21368223)
chr5 (274-353)||(476407-476486)
chr5 (110-142)||(476618-476650)
chr5 (443-498)||(476262-476317)
chr5 (270-304)||(11574557-11574591)
[»] chr3 (6 HSPs)
chr3 (104-712)||(34829254-34829862)
chr3 (269-531)||(40513568-40513830)
chr3 (253-353)||(31675124-31675224)
chr3 (253-353)||(31921196-31921296)
chr3 (59-133)||(53941717-53941791)
chr3 (265-306)||(30435294-30435335)
[»] chr1 (17 HSPs)
chr1 (28-356)||(34352614-34352942)
chr1 (293-712)||(26510243-26510662)
chr1 (269-531)||(13867677-13867939)
chr1 (269-501)||(45795270-45795502)
chr1 (605-712)||(33150830-33150937)
chr1 (24-218)||(13867450-13867644)
chr1 (18-219)||(45795534-45795735)
chr1 (19-159)||(5808969-5809109)
chr1 (110-354)||(1248288-1248532)
chr1 (253-353)||(3544947-3545047)
chr1 (468-535)||(5808734-5808801)
chr1 (59-133)||(52691885-52691959)
chr1 (455-516)||(50730070-50730131)
chr1 (110-142)||(3544804-3544836)
chr1 (16-84)||(28358353-28358421)
chr1 (629-712)||(13868037-13868120)
chr1 (455-501)||(28357937-28357983)
[»] chr8 (8 HSPs)
chr8 (265-529)||(9510800-9511064)
chr8 (265-535)||(6245139-6245409)
chr8 (18-155)||(6245483-6245618)
chr8 (656-712)||(25900869-25900925)
chr8 (59-133)||(25193502-25193576)
chr8 (449-526)||(15439189-15439266)
chr8 (449-526)||(15530493-15530570)
chr8 (443-497)||(3939265-3939319)
[»] scaffold0555 (1 HSPs)
scaffold0555 (253-353)||(7862-7962)
[»] scaffold0043 (2 HSPs)
scaffold0043 (253-353)||(34455-34555)
scaffold0043 (110-142)||(34312-34344)


Alignment Details
Target: chr6 (Bit Score: 585; Significance: 0; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 585; E-Value: 0
Query Start/End: Original strand, 20 - 712
Target Start/End: Original strand, 14686621 - 14687313
Alignment:
Q  20 gaagtagcgaagattagagatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttactttt 119  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14686621 gaagtagcgaagattagggatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtcaaaaaagatgggggacggaactagcacttactttt 14686720  T
Q  120 ggtatgacaggtggcttggtgatacacctttttgtactagattccatcgtttgtttgatttagcatctaataaattgagcactgtggctgatatggttga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14686721 ggtatgacaggtggcttggtgatacacctttttgtactagattccgtcgtttgtttgatttagcatctaataaattgagcactgtggctgatatggttga 14686820  T
Q  220 ctttggtggggagggtgacggagagatatgggtctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggt 319  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  14686821 ctttggtggggagggtgacggagagatgtgggtctggaggcgtccgttgagggcgtgggaggatgagctgttagaggagtgtagggttttaattaatggt 14686920  T
Q  320 gtcgttttgcagcataatatctctgacaggtggcaattggattcggattctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaag 419  Q
    ||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| |     
T  14686921 gtcattttgcagcataatatctctgacaggtggcaatgggactcgcattctgttggcagttatagtgtgggaggcgcctatctttatcttactactccat 14687020  T
Q  420 cggagcctccagacgttcctttgggagaccttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgcc 519  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14687021 tggagtctccagacgttcctttgggagaccttatatggcataagcaggtgccgcttaaggtttccatttttgcttggcgattattgcgtgataggttgcc 14687120  T
Q  520 gactaagaatcatctttttaggtgtggcataatcaacagcgaggcttgtatgtgtgtcacagggtgcggtatggaagagactacatctcatctttttatt 619  Q
    |||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14687121 gactaagaatcatctttttaggcgtggcataatcaacagtgaggtttgtatgtgtgtcacagggtgcggtgtggaagagactacatctcatctttttatt 14687220  T
Q  620 cattgcaccacttttggttctttgtgggatcttatcaggtcttggatcggaatgtcaggtgctgacccttttcatattgatgtccatctcatt 712  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||| |||||    
T  14687221 cattgcaccacttttggttctttgtggcatcttatcaggtcttggatcggaatgtcaggtgctgacccttttactattgaggcccatttcatt 14687313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 527
Target Start/End: Complemental strand, 26513816 - 26513744
Alignment:
Q  455 tggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaaga 527  Q
    |||||||||||||| || || ||||||||||||||||||||||  || ||||| |||||||||||||| ||||    
T  26513816 tggcataagcaggttcctctaaaggtttccatttttgcttggcagttgttgcgggataggttgccgaccaaga 26513744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 14844004 - 14844083
Alignment:
Q  274 gtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggc 353  Q
    ||||||||||||| || |||| ||||||||||  ||| |||||||||| |||||||||  | |||| |||||||||||||    
T  14844004 gtgggaggaggagttggtagaagagtgtaggcaattacttaatggtgttgttttgcagtctgatatttctgacaggtggc 14844083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 25350710 - 25350636
Alignment:
Q  59 gggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttacttttggtatgacaggtgg 133  Q
    ||||||||||||||||||||| |||| |||| | |||||||| ||||||| ||||  |||||| |||| ||||||    
T  25350710 gggggttggtttgcagagagggtgtcgaaaagggtgggggacggaactagtactttgttttggcatgataggtgg 25350636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 14843840 - 14843872
Alignment:
Q  110 acttacttttggtatgacaggtggcttggtgat 142  Q
    |||||||||||||||||||||||||||||||||    
T  14843840 acttacttttggtatgacaggtggcttggtgat 14843872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 270 - 304
Target Start/End: Original strand, 5085889 - 5085923
Alignment:
Q  270 gggcgtgggaggaggagctgttagaggagtgtagg 304  Q
    ||||||||||||||||| |||||||||||||||||    
T  5085889 gggcgtgggaggaggagatgttagaggagtgtagg 5085923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 480; Significance: 0; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 141 - 712
Target Start/End: Complemental strand, 26856119 - 26855548
Alignment:
Q  141 atacacctttttgtactagattccatcgtttgtttgatttagcatctaataaattgagcactgtggctgatatggttgactttggtggggagggtgacgg 240  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  26856119 atacacctttttgtactagattccgtcgtttgtttgatttagcatctaataaattgagcactgtggctaatatggttgtctttggtggggagggtgacgg 26856020  T
Q  241 agagatatgggtctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatc 340  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26856019 agagatgtggggctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcattttgcagcataatatc 26855920  T
Q  341 tctgacaggtggcaattggattcggattctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaagcggagcctccagacgttcctt 440  Q
    || ||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||||    
T  26855919 tccgacaggtggcaatgggactcggattatggtggcggttatagtgtgggaggcgcctatcatcatcttacaactcaagctgaacctccagacgttcctt 26855820  T
Q  441 tgggagaccttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctttttag 540  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26855819 tgggagaccttatatggcataagcaggtgccgctcaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctttttag 26855720  T
Q  541 gtgtggcataatcaacagcgaggcttgtatgtgtgtcacagggtgcggtatggaagagactacatctcatctttttattcattgcaccacttttggttct 640  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26855719 gcgtggcataatcaacagcgaggcttgtatgtgtgtcacagggtgcggtatggaagagactacatctcatctttttattcattgcaccacttttggttct 26855620  T
Q  641 ttgtgggatcttatcaggtcttggatcggaatgtcaggtgctgacccttttcatattgatgtccatctcatt 712  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||| |||||    
T  26855619 ttgtggcatcttatcaggtctttgatcggaatgtcaggtgctgacccttttaatattaatgaccatttcatt 26855548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 531
Target Start/End: Complemental strand, 35213731 - 35213649
Alignment:
Q  449 cttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatca 531  Q
    ||||| |||||||| || |||||||| ||||||||||||||||||||  |||| || || |||||||||||||||||||||||    
T  35213731 cttatctggcataatcaagtgccgcttaaggtttccatttttgcttgaagattgttacgggataggttgccgactaagaatca 35213649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 20349450 - 20349369
Alignment:
Q  61 gggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttacttttggtatgacaggtggcttggtgat 142  Q
    ||||||||||||||||||| |||| |||||| |||||||   |||||| |||| |||||||||||| |||||| | ||||||    
T  20349450 gggttggtttgcagagagggtgtcgaaaaaggtgggggatgtaactagtactttcttttggtatgataggtggttaggtgat 20349369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 529
Target Start/End: Complemental strand, 44433496 - 44433425
Alignment:
Q  458 cataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaat 529  Q
    ||||| ||||| ||||||||||| || |||||||||||| |||| |||||||| ||||| || || ||||||    
T  44433496 cataatcaggtaccgctgaaggtgtctatttttgcttggagattgttgcgtgacaggttaccaaccaagaat 44433425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 525
Target Start/End: Complemental strand, 4077367 - 4077297
Alignment:
Q  455 tggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaa 525  Q
    |||||||| ||||||||| |||||||||| |||||||||||| | ||  | |||||||| ||||| |||||    
T  4077367 tggcataaccaggtgccgttgaaggtttctatttttgcttggaggttgcttcgtgatagattgcctactaa 4077297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 306; Significance: 1e-172; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 235 - 712
Target Start/End: Complemental strand, 20544396 - 20543920
Alignment:
Q  235 tgacggagagatatgggtctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcat 334  Q
    |||||||||||| ||||  |||||||| | | |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  20544396 tgacggagagatgtggggttggaggcgacggctgagggcgtgggaggaggagatgttagaggagtgtaggtttttaattaatggtgtcgttt-gcagcat 20544298  T
Q  335 aatatctctgacaggtggcaattggattcggattctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaagcggagcctccagacg 434  Q
    |||||  |||||||||| |||| ||| || ||||||||||| ||||||||||||||||||| ||||| | ||||||||||||| ||||| ||||||||||    
T  20544297 aatattactgacaggtgacaatgggactctgattctgttggtggttatagtgtgggaggcgtctatcatcatcttacaactcaggcggaacctccagacg 20544198  T
Q  435 ttcctttgggagaccttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatct 534  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||    
T  20544197 ttcctttgggagatcttatatggcataagcaggtgccgctgaaggtttccatttttacttggcgattattgcgagataggttgccgactaagaaccatct 20544098  T
Q  535 ttttaggtgtggcataatcaacagcgaggcttgtatgtgtgtcacagggtgcggtatggaagagactacatctcatctttttattcattgcaccactttt 634  Q
    | | ||| |||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| ||||||||    
T  20544097 tctaaggcgtggcataatcaacggcgagacaagtatgtgtgtcacagggtgcggtatggaagagactacatctcatttatttattcactgcgccactttt 20543998  T
Q  635 ggttctttgtgggatcttatcaggtcttggatcggaatgtcaggtgctgacccttttcatattgatgtccatctcatt 712  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| |||||    
T  20543997 ggttcattgtggcatcttatcaggtcttggatcggaatgtcaggtgctgacccctttaatattgatgaccatttcatt 20543920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 265 - 712
Target Start/End: Original strand, 43516588 - 43517035
Alignment:
Q  265 gttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggcaattggattcg 364  Q
    |||||||| ||||||||||||  || ||||||||||||||| |||||||||||||||||||||||||  | |||| ||||| |||||||||| ||| |      
T  43516588 gttgagggtgtgggaggaggatatgctagaggagtgtaggcatttaattaatggtgtcgttttgcagtctgatatttctgagaggtggcaatgggacttt 43516687  T
Q  365 gattctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaagcggagcctccagacgttcctttgggagaccttatatggcataagc 464  Q
    ||||||| | ||||||| |  ||| |||| | |||||   | |  ||| |||| |   | |||||||| | | |  | ||||| ||||| |||||||| |    
T  43516688 gattctgattgcggttacacggtgagaggtgtctatcaacaaccgacagctcaggttcaacctccagatgctaccattggagatcttatctggcataatc 43516787  T
Q  465 aggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctttttaggtgtggcataatcaacagcgaggc 564  Q
    |||||||||| ||||||||||||||||||||| |||| ||  | ||||||||||||||||||||||||||  |  || ||||||| |||    ||||||     
T  43516788 aggtgccgcttaaggtttccatttttgcttggagattgttatgggataggttgccgactaagaatcatctcctccggcgtggcatcatcgttggcgagg- 43516886  T
Q  565 ttgta-tgtgtgtcacagggtgcggtatggaagagactacatctcatctttttattcattgcaccacttttggttctttgtgggatcttatcaggtcttg 663  Q
    | | | ||||||| || |||||||| |||  | || ||   |||||| | ||||| |||||  | ||||| ||| |||||||| || ||||||||| |||    
T  43516887 tagcattgtgtgttactgggtgcggcatgacatagtctgtttctcatttatttatacattgtgctactttcggtactttgtggcattttatcaggtgttg 43516986  T
Q  664 gatcggaatgtcaggtgctgacccttttcatattgatgtccatctcatt 712  Q
    ||| ||||||||||||||||| ||  || ||||||||| |||| |||||    
T  43516987 gattggaatgtcaggtgctgatccccttaatattgatgaccatttcatt 43517035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 43516359 - 43516560
Alignment:
Q  18 gggaagtagcgaagattagagatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttactt 117  Q
    ||||||||||||||||||| ||||| ||||| || ||||  ||||| ||||||||||||||| |||| |||||  | || ||  |  |||| ||||||||    
T  43516359 gggaagtagcgaagattagggatggggtaggcgatgtagaggggggctggtttgcagagagggtgtcgaaaaaagtaggagatggctctagtacttactt 43516458  T
Q  118 ttggtatgacaggtggcttggtgatacacctttttgtactagattccatcgtttgtttgatttagcatctaataaattgagcactgtggctgatatggtt 217  Q
    ||||||||||| |||||||||||||   ||||||||||  || |||| |||| | ||| ||||||  |||||||| |||||||| || ||||||||||||    
T  43516459 ttggtatgacaagtggcttggtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctgatatggtt 43516558  T
Q  218 ga 219  Q
    ||    
T  43516559 ga 43516560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 540
Target Start/End: Complemental strand, 19120169 - 19120084
Alignment:
Q  455 tggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctttttag 540  Q
    |||||||||||||| ||  ||||||||||||||||||||||||| ||  |||| || |||||||| || |||| | ||||| ||||    
T  19120169 tggcataagcaggttcctatgaaggtttccatttttgcttggcggttgctgcgggacaggttgccaaccaagactaatcttgttag 19120084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 270 - 304
Target Start/End: Complemental strand, 8935352 - 8935318
Alignment:
Q  270 gggcgtgggaggaggagctgttagaggagtgtagg 304  Q
    ||||||||||||||||| |||||||||||||||||    
T  8935352 gggcgtgggaggaggagatgttagaggagtgtagg 8935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 270 - 304
Target Start/End: Complemental strand, 23657672 - 23657638
Alignment:
Q  270 gggcgtgggaggaggagctgttagaggagtgtagg 304  Q
    ||||||||||||||||| |||||||||||||||||    
T  23657672 gggcgtgggaggaggagttgttagaggagtgtagg 23657638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 270 - 304
Target Start/End: Original strand, 29553603 - 29553637
Alignment:
Q  270 gggcgtgggaggaggagctgttagaggagtgtagg 304  Q
    ||||||||||||||||| |||||||||||||||||    
T  29553603 gggcgtgggaggaggagttgttagaggagtgtagg 29553637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 46543261 - 46543216
Alignment:
Q  265 gttgagggcgtgggaggaggagctgttagaggagtgtaggctttta 310  Q
    |||| ||||||||||||||||| || |||| |||||||||||||||    
T  46543261 gttgtgggcgtgggaggaggagatggtagaagagtgtaggctttta 46543216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 283; Significance: 1e-158; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 18 - 680
Target Start/End: Complemental strand, 11196880 - 11196218
Alignment:
Q  18 gggaagtagcgaagattagagatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttactt 117  Q
    |||||||||| |||||||| ||||| ||||| || ||||  || |||||||||||| ||||| | || |||||| | |||||  | ||||| |||| |||    
T  11196880 gggaagtagctaagattagggatggggtaggcgatgtagagggtggttggtttgcacagagggtatcgaaaaaggtaggggatggcactagtactttctt 11196781  T
Q  118 ttggtatgacaggtggcttggtgatacacctttttgtactagattccatcgtttgtttgatttagcatctaataaattgagcactgtggctgatatggtt 217  Q
    || | |||| ||||||||||||||||| ||||||||||| || |||| | |||| ||||| ||||| ||||||||| |||| || |||||||||||||||    
T  11196780 tttgcatgataggtggcttggtgatactcctttttgtaccaggttccgttgtttatttgacttagcgtctaataaactgagtacggtggctgatatggtt 11196681  T
Q  218 gactttggtggggagggtgacggagagatatgggtctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatg 317  Q
    |   |||||||||||| ||||||||||   ||||  ||||||||   |||||||| ||||||||||||| || |||||||||||||||  ||||||||||    
T  11196680 gctattggtggggaggttgacggagaggcgtggggttggaggcgaatgttgagggtgtgggaggaggagatgctagaggagtgtaggcaattaattaatg 11196581  T
Q  318 gtgtcgttttgcagcataatatctctgacaggtggcaattggattcggattctgttggcggttatagtgtgggaggcgcctatctttatcttacaactca 417  Q
    |||||||||||||||||||||| |||||||||||||||| ||| || ||||||| ||| ||||| ||||||||||||| ||||| | | ||||| |||||    
T  11196580 gtgtcgttttgcagcataatatttctgacaggtggcaatgggactctgattctgctggtggttacagtgtgggaggcgtctatcatcaccttactactca 11196481  T
Q  418 agcggagcctccagacgttcctttgggagaccttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttg 517  Q
     || || |||||||| ||| || | ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  11196480 ggctgaacctccagatgttactataggagatcttatctggcataagcaggtgccgctgaaggtttccatttttacttggcgattgttgcgagataggttg 11196381  T
Q  518 ccgactaagaatcatctttttaggtgtggcataatcaacagcgaggcttgtatgtgtgtcacagggtgcggtatggaagagactacatctcatcttttta 617  Q
    ||||||||||| |||||| | ||| |||||||||||||  |||||||   ||||||||| |||||||||||||||| ||||| | | |||||| | ||||    
T  11196380 ccgactaagaaccatcttctaaggcgtggcataatcaatggcgaggcagttatgtgtgttacagggtgcggtatggcagagattgcgtctcatttattta 11196281  T
Q  618 ttcattgcaccacttttggttctttgtgggatcttatcaggtcttggatcggaatgtcaggtg 680  Q
    |||| ||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||    
T  11196280 ttcactgcgccacttttggttcattgtggcatcttatcaggtcttggatcagaatgtcaggtg 11196218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 365 - 689
Target Start/End: Complemental strand, 32624536 - 32624212
Alignment:
Q  365 gattctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaagcggagcctccagacgttcctttgggagaccttatatggcataagc 464  Q
    ||||||||||| || |||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  32624536 gattctgttggtggatatagtgtgggaggcgcctatcatcatcttacaactcaagcggaacctccagacgttcctttgggagattttatatggcataagc 32624437  T
Q  465 aggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctttttaggtgtggcataatcaacagcgaggc 564  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| |||||| | ||| |||||||||||||| |||||||    
T  32624436 aggtgccgctgaaggtttccatttttgtttggcgattattgagagataggttgccgactaagaaccatcttctaaggcgtggcataatcaacggcgaggc 32624337  T
Q  565 ttgtatgtgtgtcacagggtgcggtatggaagagactacatctcatctttttattcattgcaccacttttggttctttgtgggatcttatcaggtcttgg 664  Q
     ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  32624336 atgtatgtgtgtcacaggatgcggtatggaagagactacatctcatttatttattcattgcgccacttttggttcattgtggcatcttatcaggtcttgg 32624237  T
Q  665 atcggaatgtcaggtgctgaccctt 689  Q
    || ||||||||||||||||||||||    
T  32624236 attggaatgtcaggtgctgaccctt 32624212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 583 - 712
Target Start/End: Original strand, 144200 - 144329
Alignment:
Q  583 gtgcggtatggaagagactacatctcatctttttattcattgcaccacttttggttctttgtgggatcttatcaggtcttggatcggaatgtcaggtgct 682  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  144200 gtgcggtatggaagagactacatctcatctttttattcattgcaccacttttggttctttgtggcatcttatcaggtcttggatcggaatgtcaggtgct 144299  T
Q  683 gacccttttcatattgatgtccatctcatt 712  Q
    |||||||||  |||| ||| |||| |||||    
T  144300 gacccttttactattaatgaccatttcatt 144329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 529
Target Start/End: Complemental strand, 18634994 - 18634920
Alignment:
Q  455 tggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaat 529  Q
    |||||||||||||| ||  |||||||||||||||||||||| |||||  |||| || |||||||| || ||||||    
T  18634994 tggcataagcaggttcctatgaaggtttccatttttgcttgacgattgctgcgagacaggttgccaaccaagaat 18634920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 8e-97; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 449 - 712
Target Start/End: Original strand, 21367960 - 21368223
Alignment:
Q  449 cttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctttttaggtgtggca 548  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| |||||  | ||| ||||||    
T  21367960 cttatatggcataagtaggtgccgctgaaggtttccattttttcttggcgattattgagagataggttgccgactaagaaccatctcctaaggcgtggca 21368059  T
Q  549 taatcaacagcgaggcttgtatgtgtgtcacagggtgcggtatggaagagactacatctcatctttttattcattgcaccacttttggttctttgtggga 648  Q
    |||||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |    
T  21368060 taatcaacggcgaggcatgtaattgtgtcacagggtgcggtatggaagagactacatcttatctttttattcattgcgccacttttggttcattgtggca 21368159  T
Q  649 tcttatcaggtcttggatcggaatgtcaggtgctgacccttttcatattgatgtccatctcatt 712  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||| |||| |||||    
T  21368160 tcttatcaggtcttggatcggaatgtcaggtgctgaccctcttaatattgatgaccatttcatt 21368223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 353
Target Start/End: Complemental strand, 476486 - 476407
Alignment:
Q  274 gtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggc 353  Q
    ||||||||||||| || |||||||||||||||  ||| |||||||||| |||||||||  | |||| |||||||||||||    
T  476486 gtgggaggaggagttggtagaggagtgtaggcaattacttaatggtgttgttttgcagtctgatatttctgacaggtggc 476407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 142
Target Start/End: Complemental strand, 476650 - 476618
Alignment:
Q  110 acttacttttggtatgacaggtggcttggtgat 142  Q
    |||||||||||||||||||||||||||||||||    
T  476650 acttacttttggtatgacaggtggcttggtgat 476618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 498
Target Start/End: Complemental strand, 476317 - 476262
Alignment:
Q  443 ggagaccttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcg 498  Q
    ||||||||| | |||||||||||||| ||  |||||||||||||||| ||||||||    
T  476317 ggagaccttgtctggcataagcaggttcctttgaaggtttccattttggcttggcg 476262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 270 - 304
Target Start/End: Original strand, 11574557 - 11574591
Alignment:
Q  270 gggcgtgggaggaggagctgttagaggagtgtagg 304  Q
    ||||||||||||||||| |||||||||||||||||    
T  11574557 gggcgtgggaggaggagatgttagaggagtgtagg 11574591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 5e-64; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 104 - 712
Target Start/End: Complemental strand, 34829862 - 34829254
Alignment:
Q  104 actagcacttacttttggtatgacaggtggcttggtgatacacctttttgtactagattccatcgtttgtttgatttagcatctaataaattgagcactg 203  Q
    ||||| |||| ||||||||||||||||||||||||||||   |||||||||||||| || | ||| || |||||| |||  ||||||||| | || || |    
T  34829862 actagtactttcttttggtatgacaggtggcttggtgatgtccctttttgtactaggtttcgtcggttatttgatctagtgtctaataaactaagtacgg 34829763  T
Q  204 tggctgatatggttgactttggtggggagggtgacggagagatatgggtctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtag 303  Q
    |||||||  ||||||   |||||||||||| |||| ||||| | ||||  |||||| |   |||||||  ||||||||||||| || |||||||||||||    
T  34829762 tggctgacttggttgctcttggtggggaggttgacagagaggtgtggggttggaggagaaggttgaggctgtgggaggaggagatgctagaggagtgtag 34829663  T
Q  304 gcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggcaattggattcggattctgttggcggttatagtgtgggaggcgcctatctt 403  Q
    |   ||| |||||||||| |||||||||  | || | |||||||||||||||| ||| || |||| || ||| ||||| | |||| |||| | |||||      
T  34829662 gaaattacttaatggtgttgttttgcagtctgatctttctgacaggtggcaatgggactctgattttgatggtggttacactgtgagaggtgtctatcaa 34829563  T
Q  404 tatcttacaactcaagcggagcctccagacgttcctttgggagaccttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcgattat 503  Q
     | || | |||||| || || |||||| | | | || ||||||| ||||| |||||||||||||||| ||||||||| ||||| ||||||||||| || |    
T  34829562 caactgaaaactcaggctgatcctccatatggtactatgggagatcttatctggcataagcaggtgctgctgaaggtctccatctttgcttggcggttgt 34829463  T
Q  504 tgcgtgataggttgccgactaagaatcatctttttaggtgtggcataatcaacagcgaggcttgtatgtgtgtcacagggtgcggtatggaagagactac 603  Q
    |||| || |||||| ||| ||||||| ||||| | ||  ||||  |||||||   ||| |    ||||||||| ||||||||||| | ||||||| || |    
T  34829462 tgcgggacaggttgtcgattaagaataatcttctaagacgtggagtaatcaatgccgaagtagttatgtgtgttacagggtgcggcaaggaagagtctgc 34829363  T
Q  604 atctcatctttttattcattgcaccacttttggttctttgtgggatcttatcaggtcttggatcggaatgtcaggtgctgacccttttcatattgatgtc 703  Q
      ||||  | |||||||||||  |||||||  || | |||||| ||| ||||||||||||||||||||||||||||| | |||| ||| ||||||||| |    
T  34829362 gcctcacttgtttattcattgtgccactttcagtacattgtggcatcatatcaggtcttggatcggaatgtcaggtgttaacccctttaatattgatgac 34829263  T
Q  704 catctcatt 712  Q
    ||| |||||    
T  34829262 catttcatt 34829254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 269 - 531
Target Start/End: Original strand, 40513568 - 40513830
Alignment:
Q  269 agggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggcaattggattcggatt 368  Q
    |||| ||||||||||||  || |||||||||||||||| |||||||||||||||||||||||| || |||| |||||||||||||||| ||| || |||     
T  40513568 agggtgtgggaggaggatatgctagaggagtgtaggctgttaattaatggtgtcgttttgcagtatgatatttctgacaggtggcaatgggactccgata 40513667  T
Q  369 ctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaagcggagcctccagacg-ttcctttgggagaccttatatggcataagcagg 467  Q
    | | |  |||||| |  ||| | |  |||||||   | ||||||  ||| |   | |||||||| | |||| ||||  |||||||| |||||||| ||||    
T  40513668 cggattacggttacacggtgagcgatgcctatcaacaacttacagttcaggttcaacctccagatgcttccattggc-gaccttatctggcataatcagg 40513766  T
Q  468 tgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatca 531  Q
    ||||||| ||||||||||||||||||||| |||| || || |||||||||||||||||||||||    
T  40513767 tgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatca 40513830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 353
Target Start/End: Complemental strand, 31675224 - 31675124
Alignment:
Q  253 ctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtgg 352  Q
    ||||||| | || ||| ||| ||||||||||||| || ||||||||||||||   ||| |||||||||| |||||||||  | |||| ||||||||||||    
T  31675224 ctggaggagacctttgtgggtgtgggaggaggagttggtagaggagtgtaggaaattacttaatggtgtggttttgcagtctgatatttctgacaggtgg 31675125  T
Q  353 c 353  Q
    |    
T  31675124 c 31675124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 353
Target Start/End: Original strand, 31921196 - 31921296
Alignment:
Q  253 ctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtgg 352  Q
    ||||||| | || ||| ||| ||||||||||||| || ||||||||||||||   ||| |||||||||| |||||||||  | |||| ||||||||||||    
T  31921196 ctggaggagacctttgtgggtgtgggaggaggagttggtagaggagtgtaggaaattacttaatggtgtggttttgcagtctgatatttctgacaggtgg 31921295  T
Q  353 c 353  Q
    |    
T  31921296 c 31921296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 53941791 - 53941717
Alignment:
Q  59 gggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttacttttggtatgacaggtgg 133  Q
    ||||||||||||||||||||| |||| |||| | |||||||| ||||||| ||||  |||||| |||| ||||||    
T  53941791 gggggttggtttgcagagagggtgtcgaaaagggtgggggacggaactagtactttgttttggcatgataggtgg 53941717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 30435335 - 30435294
Alignment:
Q  265 gttgagggcgtgggaggaggagctgttagaggagtgtaggct 306  Q
    |||| ||| |||||||||||||||||||| ||||||||||||    
T  30435335 gttgtgggagtgggaggaggagctgttaggggagtgtaggct 30435294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 2e-54; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 28 - 356
Target Start/End: Complemental strand, 34352942 - 34352614
Alignment:
Q  28 gaagattagagatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttacttttggtatgac 127  Q
    ||||||||| ||||| ||||| || ||||  ||||||||||||||||||||| |||| |||||| | || ||  | ||||| |||| |||||| ||||||    
T  34352942 gaagattagggatggggtaggcgatgtagaggggggttggtttgcagagagggtgtcgaaaaaggtaggagattgcactagtactttcttttgatatgac 34352843  T
Q  128 aggtggcttggtgatacacctttttgtactagattccatcgtttgtttgatttagcatctaataaattgagcactgtggctgatatggttgactttggtg 227  Q
    |||||||||||||||   ||||||||||  || || | |||  | ||||| ||||| ||||||||  ||||||| || ||| ||||||||| | ||||||    
T  34352842 aggtggcttggtgatgttcctttttgtatcaggttgcgtcgcctatttgacttagcgtctaataagctgagcacagtagctaatatggttgcccttggtg 34352743  T
Q  228 gggagggtgacggagagatatgggtctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgtttt 327  Q
    |||||| ||||||||||   |||| ||||||||||  |||||||| ||||||||||||| || |||||||||||||||  |||| |||||||||||||||    
T  34352742 gggaggttgacggagaggcgtggggctggaggcgtaggttgagggtgtgggaggaggagatgctagaggagtgtaggcaattaactaatggtgtcgtttt 34352643  T
Q  328 gcagcataatatctctgacaggtggcaat 356  Q
    ||||  | |||| | ||||||||||||||    
T  34352642 gcagtctgatatttatgacaggtggcaat 34352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 293 - 712
Target Start/End: Original strand, 26510243 - 26510662
Alignment:
Q  293 gaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggcaattggattcggattctgttggcggttatagtgtgggag 392  Q
    |||||||||||||  ||| || ||||||| ||||||||| || || | |||||||||||||||| ||| || |||| || ||| ||||| | |||| |||    
T  26510243 gaggagtgtaggcaattacttgatggtgttgttttgcagtatgatctttctgacaggtggcaatgggactctgattttgctggtggttacactgtgagag 26510342  T
Q  393 gcgcctatctttatcttacaactcaagcggagcctccagacgttcctttgggagaccttatatggcataagcaggtgccgctgaaggtttccatttttgc 492  Q
    |   ||||    | || ||||||||  | || |||||||| | | || ||||||| ||||| ||||||||||| |||||||||||||| ||||| |||||    
T  26510343 gtttctataaacaactgacaactcagactgatcctccagatggtactatgggagatcttatctggcataagcaagtgccgctgaaggtctccatctttgc 26510442  T
Q  493 ttggcgattattgcgtgataggttgccgactaagaatcatctttttaggtgtggcataatcaacagcgaggcttgtatgtgtgtcacagggtgcggtatg 592  Q
    ||| || || ||||| || |||||||||||||||||| ||||| | ||  ||||  ||||||| | ||| ||   ||||||||| ||||| ||||| | |    
T  26510443 ttgacggttgttgcgggacaggttgccgactaagaataatcttatgagacgtggagtaatcaataccgaagcagttatgtgtgttacaggatgcggcaag 26510542  T
Q  593 gaagagactacatctcatctttttattcattgcaccacttttggttctttgtgggatcttatcaggtcttggatcggaatgtcaggtgctgacccttttc 692  Q
    |||||| || |  ||||  | |||||||||||  ||| ||| ||| | |||||| ||| ||||||||||||||||||||||||||||| |||||| |||     
T  26510543 gaagagtctgcgcctcacttgtttattcattgtgccattttcggtacattgtggcatcatatcaggtcttggatcggaatgtcaggtgttgaccccttta 26510642  T
Q  693 atattgatgtccatctcatt 712  Q
    |||| |||| |||| |||||    
T  26510643 atatcgatgaccatttcatt 26510662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 269 - 531
Target Start/End: Original strand, 13867677 - 13867939
Alignment:
Q  269 agggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggcaattggattcggatt 368  Q
    |||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||  | |||| |||||||||||||||| ||| || ||||    
T  13867677 agggtgtgggaggaggatatgctagaggagtgtaggcttttaattaatggtgtcgttttgcagtctgatatttctgacaggtggcaatgggactccgatt 13867776  T
Q  369 ctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaagcggagcctccagacg-ttcctttgggagaccttatatggcataagcagg 467  Q
    ||| |  |||||| |  |||  ||  |||||||   | |||||| |||| |   | |||||||| | |||| || || |||||||| |||||||| ||||    
T  13867777 ctgattacggttacacggtgatagatgcctatcaacaacttacagctcaggttcaacctccagatgcttccatt-ggcgaccttatctggcataatcagg 13867875  T
Q  468 tgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatca 531  Q
    ||||||| ||||||||||||||||||||| |||| || || |||||||||||||||||||||||    
T  13867876 tgccgcttaaggtttccatttttgcttggagattgttacgggataggttgccgactaagaatca 13867939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 269 - 501
Target Start/End: Complemental strand, 45795502 - 45795270
Alignment:
Q  269 agggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggcaattggattcggatt 368  Q
    |||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||  | |||| |||||||||||||||| ||| || ||||    
T  45795502 agggtgtgggaggaggatatgctagaggagtgtaggcttttaattaatggtgtcgttttgcagtctgatatttctgacaggtggcaatgggactccgatt 45795403  T
Q  369 ctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaagcggagcctccagacg-ttcctttgggagaccttatatggcataagcagg 467  Q
    ||| | | ||||| |  ||| |||| | |||||   | || ||| |||| |   | |||||||| | |||| || ||||||||||| |||||||| ||||    
T  45795402 ctgattgtggttacacggtgagaggtgtctatcaacaactgacagctcaggttcaacctccagatgcttccatt-ggagaccttatttggcataatcagg 45795304  T
Q  468 tgccgctgaaggtttccatttttgcttggcgatt 501  Q
    ||||||| ||||||||||||||||||||| ||||    
T  45795303 tgccgcttaaggtttccatttttgcttggggatt 45795270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 605 - 712
Target Start/End: Complemental strand, 33150937 - 33150830
Alignment:
Q  605 tctcatctttttattcattgcaccacttttggttctttgtgggatcttatcaggtcttggatcggaatgtcaggtgctgacccttttcatattgatgtcc 704  Q
    |||||| | |||||||| ||| |||||||||| || |||||| |||||||||||||||||||||||||||||||||| |||||  || ||||||||| ||    
T  33150937 tctcatttatttattcactgcgccacttttggctcattgtggcatcttatcaggtcttggatcggaatgtcaggtgccgacccccttaatattgatgacc 33150838  T
Q  705 atctcatt 712  Q
    || |||||    
T  33150837 atttcatt 33150830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 13867450 - 13867644
Alignment:
Q  24 tagcgaagattagagatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttacttttggta 123  Q
    |||| |||||||| ||||| ||||| || ||||  ||||| ||||||||||||||| |||| || ||  | || ||  |  |||| ||||||||||||||    
T  13867450 tagcaaagattagggatggggtaggcgatgtagaggggggctggtttgcagagagggtgtcgaagaaagtaggagatggttctagtacttacttttggta 13867549  T
Q  124 tgacaggtggcttggtgatacacctttttgtactagattccatcgtttgtttgatttagcatctaataaattgagcactgtggctgatatggttg 218  Q
    |||||||||||||||||||   ||||||||||  || |||| |||| | ||| ||||||  |||||||| |||||||| || |||||||||||||    
T  13867550 tgacaggtggcttggtgatgttcctttttgtatcaggttccgtcgtctttttaatttagtgtctaataagttgagcacggtagctgatatggttg 13867644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 45795735 - 45795534
Alignment:
Q  18 gggaagtagcgaagattagagatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttactt 117  Q
    ||||||||||||||||||| ||||| ||||| || ||||  ||||| ||||||| ||| ||| |||| || ||  | || ||  |  |||| ||||||||    
T  45795735 gggaagtagcgaagattagggatggggtaggcgatgtagaggggggctggtttgtagatagggtgtcgaagaaagtaggagatggctctagtacttactt 45795636  T
Q  118 ttggtatgacaggtggcttggtgatacacctttttgtactagattccatcgtttgtttgatttagcatctaataaattgagcactgtggctgatatggtt 217  Q
    |||||||||||||||||| ||||||   ||||||||||  || |||| |||| | ||| ||||||  |||||||| |||||||| || ||||||||||||    
T  45795635 ttggtatgacaggtggctaggtgatgttcctttttgtatcagtttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctgatatggtt 45795536  T
Q  218 ga 219  Q
    ||    
T  45795535 ga 45795534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 5809109 - 5808969
Alignment:
Q  19 ggaagtagcgaagattagagatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttacttt 118  Q
    |||||||| ||||||||| ||||| |||||||| | ||  || |||||||| ||||||||| |||| |||||| ||||||   | | ||| || | ||||    
T  5809109 ggaagtagtgaagattagggatggggtaggtgatgcagatggaggttggttcgcagagagggtgtcgaaaaaggtggggggtggcattagtacattcttt 5809010  T
Q  119 tggtatgacaggtggcttggtgatacacctttttgtactag 159  Q
    ||||||||||||||||||||||||   ||||||||||||||    
T  5809009 tggtatgacaggtggcttggtgatgttcctttttgtactag 5808969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 110 - 354
Target Start/End: Original strand, 1248288 - 1248532
Alignment:
Q  110 acttacttttggtatgacaggtggcttggtgatacacctttttgtactagattccatcgtttgtttgatttagcatctaataaattgagcactgtggctg 209  Q
    |||||||||||||||||||||||||||||||||   ||| || | || || ||   |||||| ||||| |||||  ||||||| ||||| || ||||| |    
T  1248288 acttacttttggtatgacaggtggcttggtgatgtccctcttcggacaaggtttagtcgtttatttgacttagcgactaataagttgagtacggtggcag 1248387  T
Q  210 atatggttgactttggtggggagggtgacggagagatatgggtctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggctttt 309  Q
    ||||  ||| | ||||| |||||  ||  |||| |   |||   |||||| | || ||| |||  |||||||||||||||||||||||||||||||  ||    
T  1248388 atatttttgtccttggttgggagaatggaggaggggcgtggaattggaggagacctttgtgggtatgggaggaggagctgttagaggagtgtaggcaatt 1248487  T
Q  310 aattaatggtgtcgttttgcagcataatatctctgacaggtggca 354  Q
    | |||||||||| ||||||||   | |||| ||||||||||||||    
T  1248488 acttaatggtgttgttttgcaatttgatatttctgacaggtggca 1248532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 353
Target Start/End: Original strand, 3544947 - 3545047
Alignment:
Q  253 ctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtgg 352  Q
    ||||||| | || ||| ||| ||||||||||||| || |||| ||||||||||  ||| |||||||||| |||||||||  | |||| ||||||||||||    
T  3544947 ctggaggagacctttgtgggtgtgggaggaggagttggtagaagagtgtaggcaattacttaatggtgttgttttgcagtctgatatttctgacaggtgg 3545046  T
Q  353 c 353  Q
    |    
T  3545047 c 3545047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 468 - 535
Target Start/End: Complemental strand, 5808801 - 5808734
Alignment:
Q  468 tgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctt 535  Q
    ||||||| |||||||| || ||||||||||| || ||||| || |||||||||||||||||| |||||    
T  5808801 tgccgctaaaggtttctatctttgcttggcggttgttgcgagacaggttgccgactaagaataatctt 5808734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 52691959 - 52691885
Alignment:
Q  59 gggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttacttttggtatgacaggtgg 133  Q
    ||||||||||||||||||||| |||| |||| | |||||||| ||||||| ||||  |||||| |||| ||||||    
T  52691959 gggggttggtttgcagagagggtgtcgaaaagggtgggggacggaactagtactttgttttggcatgataggtgg 52691885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 516
Target Start/End: Complemental strand, 50730131 - 50730070
Alignment:
Q  455 tggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggtt 516  Q
    ||||| || ||||| ||||||||||| ||||||||||||||| |||| |||||||| |||||    
T  50730131 tggcacaaacaggtaccgctgaaggtgtccatttttgcttggagatttttgcgtgacaggtt 50730070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 3544804 - 3544836
Alignment:
Q  110 acttacttttggtatgacaggtggcttggtgat 142  Q
    |||||||||||||||||||||||||||||||||    
T  3544804 acttacttttggtatgacaggtggcttggtgat 3544836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 28358421 - 28358353
Alignment:
Q  16 gagggaagtagcgaagattagagatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtc 84  Q
    ||||||||||||||||||||| ||||  ||||| ||||| || ||||| |||||||||| |||| ||||    
T  28358421 gagggaagtagcgaagattagggatgtagtaggagaggttggtgggggctggtttgcagggagggtgtc 28358353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 712
Target Start/End: Original strand, 13868037 - 13868120
Alignment:
Q  629 acttttggttctttgtgggatcttatcaggtcttggatcggaatgtcaggtgctgacccttttcatattgatgtccatctcatt 712  Q
    ||||||||| |||| ||| || || |||||| |||||| ||||||||||||||||| ||  || ||||||||| |||| |||||    
T  13868037 acttttggtactttatggcattttgtcaggtgttggattggaatgtcaggtgctgatccccttaatattgatgaccatttcatt 13868120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 28357983 - 28357937
Alignment:
Q  455 tggcataagcaggtgccgctgaaggtttccatttttgcttggcgatt 501  Q
    |||||||||||||| ||  |||||||||||||| |||||||||||||    
T  28357983 tggcataagcaggtccctttgaaggtttccattgttgcttggcgatt 28357937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 265 - 529
Target Start/End: Complemental strand, 9511064 - 9510800
Alignment:
Q  265 gttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggcaattggattcg 364  Q
    |||||||| ||||||||||||| ||||||||||||||||||  ||  |||||||||| |||||||||| |||||| | |||||| ||||  | ||| ||     
T  9511064 gttgagggtgtgggaggaggagatgttagaggagtgtaggcaattgcttaatggtgttgttttgcagcctaatatttttgacagatggctttgggactct 9510965  T
Q  365 gattctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaagcggagcctccagacgttcctttgggagaccttatatggcataagc 464  Q
    | ||||| ||| ||||| | |||| |||| | ||||    | || ||||| ||||| || |||| ||| ||| ||  |||||| ||||| ||||||||||    
T  9510964 gtttctgatggtggttacactgtgagaggtgtctatgaacaactgacaacgcaagctgatcctcaagatgttactacgggagatcttatctggcataagc 9510865  T
Q  465 aggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaat 529  Q
    |||||||| | |||||||| || |||||||| || || ||||| || |||||| |||||||||||    
T  9510864 aggtgccgttaaaggtttctatctttgcttgacggttgttgcgagacaggttgtcgactaagaat 9510800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 265 - 535
Target Start/End: Complemental strand, 6245409 - 6245139
Alignment:
Q  265 gttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtggcaattggattcg 364  Q
    |||||||| ||||||||||||| ||||||| |||||||||   ||| |||||||||| ||||||| || | |||| ||||||| |||||  | ||||||     
T  6245409 gttgagggtgtgggaggaggagatgttagatgagtgtaggtaattacttaatggtgttgttttgccgcctgatatttctgacaagtggctttgggattct 6245310  T
Q  365 gattctgttggcggttatagtgtgggaggcgcctatctttatcttacaactcaagcggagcctccagacgttcctttgggagaccttatatggcataagc 464  Q
    | ||||| ||| ||||| | |||| |||| | ||||    | || ||||  || || |  |||| ||| ||| ||  |||||| ||||| ||||||||||    
T  6245309 gtttctgatggtggttacactgtgagaggtgtctatgaacaactgacaatgcaggctgttcctcaagatgttactacgggagatcttatttggcataagc 6245210  T
Q  465 aggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaagaatcatctt 535  Q
    ||||||| || |||||||| || ||||||||||||||  |||| |||||||||| |||||||||| |||||    
T  6245209 aggtgccactaaaggtttctatctttgcttggcgattgatgcgagataggttgctgactaagaataatctt 6245139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 6245618 - 6245483
Alignment:
Q  18 gggaagtagcgaagattagagatggtgtaggtgaggtaggagggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttactt 117  Q
    ||||||||| ||||||||| ||||| |||||||| | ||  ||||||||||| |||||| |  |||| |||||| |||||||  | ||||| |||| |||    
T  6245618 gggaagtagtgaagattagggatggggtaggtgatgcagatgggggttggttcgcagaggg--tgtcgaaaaaggtgggggatggcactagtactttctt 6245521  T
Q  118 ttggtatgacaggtggcttggtgatacacctttttgta 155  Q
    ||||||||| |||||||||||||||   ||||||||||    
T  6245520 ttggtatgataggtggcttggtgatgttcctttttgta 6245483  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 656 - 712
Target Start/End: Complemental strand, 25900925 - 25900869
Alignment:
Q  656 aggtcttggatcggaatgtcaggtgctgacccttttcatattgatgtccatctcatt 712  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||| |||| |||||    
T  25900925 aggtcttggatcggaatgtcaggtgttgacccctttaatattgatgaccatttcatt 25900869  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 25193576 - 25193502
Alignment:
Q  59 gggggttggtttgcagagaggttgtcaaaaaagatgggggacagaactagcacttacttttggtatgacaggtgg 133  Q
    ||||||||||||| ||||||| ||||||||| | |||||||| ||||||| ||||  |||||| |||| ||||||    
T  25193576 gggggttggtttgtagagagggtgtcaaaaagggtgggggacggaactagtactttgttttggcatgataggtgg 25193502  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 526
Target Start/End: Complemental strand, 15439266 - 15439189
Alignment:
Q  449 cttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaag 526  Q
    ||||| |||||||| ||||| ||  ||||||| |||||||||||||||||||| ||||| || ||| |||| ||||||    
T  15439266 cttatgtggcataaacaggtacccatgaaggtctccatttttgcttggcgattgttgcgggacaggctgccaactaag 15439189  T

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Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 526
Target Start/End: Complemental strand, 15530570 - 15530493
Alignment:
Q  449 cttatatggcataagcaggtgccgctgaaggtttccatttttgcttggcgattattgcgtgataggttgccgactaag 526  Q
    ||||| |||||||| ||||| ||  ||||||| |||||||||||||||||||| ||||| || ||| |||| ||||||    
T  15530570 cttatgtggcataaacaggtacccatgaaggtctccatttttgcttggcgattgttgcgggacaggctgccaactaag 15530493  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 443 - 497
Target Start/End: Complemental strand, 3939319 - 3939265
Alignment:
Q  443 ggagaccttatatggcataagcaggtgccgctgaaggtttccatttttgcttggc 497  Q
    ||||||||| | |||||||||||||| ||  |||||||||||||| |||||||||    
T  3939319 ggagaccttgtctggcataagcaggttcctttgaaggtttccattcttgcttggc 3939265  T

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Target: scaffold0555 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 353
Target Start/End: Complemental strand, 7962 - 7862
Alignment:
Q  253 ctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtgg 352  Q
    ||||||| | || ||| ||| ||||||||||||| || |||||||||||||||  ||| |||||| ||| |||||||||  | |||| ||||||||||||    
T  7962 ctggaggagacctttgtgggtgtgggaggaggagttggtagaggagtgtaggcaattacttaatgttgttgttttgcagtctgatatttctgacaggtgg 7863  T
Q  353 c 353  Q
    |    
T  7862 c 7862  T

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Target: scaffold0043 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 353
Target Start/End: Original strand, 34455 - 34555
Alignment:
Q  253 ctggaggcgtccgttgagggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcgttttgcagcataatatctctgacaggtgg 352  Q
    ||||||| | || ||| ||| ||||||||||||| || |||||||||||||||  ||| |||||||||| ||||| |||  | |||| ||||||||||||    
T  34455 ctggaggagacctttgtgggtgtgggaggaggagttggtagaggagtgtaggcaattacttaatggtgttgttttacagtctgatatttctgacaggtgg 34554  T
Q  353 c 353  Q
    |    
T  34555 c 34555  T

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Target: scaffold0043; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 34312 - 34344
Alignment:
Q  110 acttacttttggtatgacaggtggcttggtgat 142  Q
    |||||||||||||||||||||||||||||||||    
T  34312 acttacttttggtatgacaggtggcttggtgat 34344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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