View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7950_high_31 (Length: 314)
Name: NF7950_high_31
Description: NF7950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7950_high_31 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 40553443 - 40553193
Alignment:
| Q |
18 |
atgaaccagaaaaggatgcatgattcaccttgaaatgttggtgttctcgagcagttctacaagcttatcagattggctaaaatgaactatcttgtaaata |
117 |
Q |
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| T |
40553443 |
atgaaccagaaaaggatgcatgattcaccttgaaatgttggtgttctcgagcagttctacaagcttatcagattggctaaaatgaactatcttgtaaata |
40553344 |
T |
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| Q |
118 |
acagaaaggcatccatgacaaacatatgtatttggatctgaattaaccacctgtcaagggtgaagtacaaaataaaatgtagcnnnnnnnnnnnnnnnnn |
217 |
Q |
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| T |
40553343 |
acagaaaggcatccatgacaaacatatgtatttggatctgaattaaccacctgtcaagggtgaagtacaaattaaaatgtagctttttattttttatttt |
40553244 |
T |
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| Q |
218 |
nagaaaaggtctgcgacaacaattcatattgcaatatcaaggtttttgatg |
268 |
Q |
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| T |
40553243 |
tagaaaaggtctgcgacaacaattcatattgcaatatcaaggtttttgatg |
40553193 |
T |
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