View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7950_low_14 (Length: 509)

Name: NF7950_low_14
Description: NF7950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7950_low_14
NF7950_low_14
[»] chr7 (65 HSPs)
chr7 (272-494)||(37165316-37165537)
chr7 (51-273)||(35084012-35084235)
chr7 (57-273)||(43107817-43108033)
chr7 (58-276)||(33153026-33153244)
chr7 (57-275)||(35181178-35181396)
chr7 (57-273)||(23106439-23106655)
chr7 (13-273)||(29235981-29236239)
chr7 (50-275)||(48879367-48879592)
chr7 (57-273)||(3157422-3157638)
chr7 (57-273)||(19932967-19933183)
chr7 (57-273)||(18206231-18206447)
chr7 (13-273)||(30082295-30082553)
chr7 (57-274)||(41889157-41889374)
chr7 (57-273)||(40560368-40560584)
chr7 (57-273)||(47383392-47383608)
chr7 (60-273)||(21654033-21654246)
chr7 (61-258)||(28608363-28608560)
chr7 (61-275)||(42617661-42617876)
chr7 (75-273)||(40593822-40594020)
chr7 (57-273)||(45598890-45599109)
chr7 (61-273)||(7989219-7989432)
chr7 (57-270)||(48937805-48938017)
chr7 (57-270)||(23731546-23731761)
chr7 (57-236)||(34808205-34808384)
chr7 (61-260)||(41815618-41815817)
chr7 (57-228)||(19964151-19964322)
chr7 (61-266)||(22111248-22111454)
chr7 (61-266)||(40583135-40583341)
chr7 (57-273)||(32491019-32491235)
chr7 (57-273)||(44600432-44600648)
chr7 (13-266)||(18800686-18800946)
chr7 (96-273)||(9818493-9818670)
chr7 (96-273)||(10720418-10720595)
chr7 (57-267)||(41890162-41890370)
chr7 (57-237)||(36576404-36576582)
chr7 (50-273)||(28843437-28843651)
chr7 (58-230)||(38260308-38260480)
chr7 (57-157)||(48942943-48943043)
chr7 (50-202)||(48339245-48339397)
chr7 (71-273)||(14805875-14806076)
chr7 (71-273)||(15252869-15253070)
chr7 (71-270)||(35923257-35923455)
chr7 (71-273)||(25737580-25737782)
chr7 (58-118)||(39348776-39348836)
chr7 (50-125)||(39337509-39337584)
chr7 (58-171)||(31769017-31769130)
chr7 (58-230)||(35887965-35888137)
chr7 (140-273)||(46760210-46760343)
chr7 (73-273)||(22632096-22632296)
chr7 (71-276)||(6191050-6191252)
chr7 (140-273)||(18102604-18102737)
chr7 (52-100)||(28941277-28941325)
chr7 (71-274)||(45485960-45486163)
chr7 (58-106)||(37767139-37767187)
chr7 (50-105)||(6882384-6882439)
chr7 (71-273)||(25944581-25944784)
chr7 (140-273)||(19912722-19912855)
chr7 (73-230)||(47779611-47779768)
chr7 (200-274)||(2633290-2633363)
chr7 (140-228)||(10248602-10248692)
chr7 (140-230)||(16917545-16917635)
chr7 (58-228)||(39170527-39170696)
chr7 (219-267)||(2610544-2610591)
chr7 (71-230)||(4910631-4910788)
chr7 (140-228)||(12632342-12632430)
[»] chr4 (66 HSPs)
chr4 (50-273)||(5222212-5222436)
chr4 (58-273)||(29180332-29180547)
chr4 (58-273)||(30776404-30776619)
chr4 (57-273)||(39969909-39970125)
chr4 (57-269)||(53677403-53677615)
chr4 (57-274)||(29899699-29899916)
chr4 (57-273)||(37788435-37788651)
chr4 (57-273)||(50768429-50768645)
chr4 (58-275)||(30777472-30777690)
chr4 (57-270)||(43980482-43980695)
chr4 (57-274)||(55937622-55937839)
chr4 (57-273)||(3043087-3043303)
chr4 (57-273)||(10591423-10591639)
chr4 (62-273)||(30011873-30012083)
chr4 (57-260)||(49902011-49902214)
chr4 (57-273)||(9797995-9798211)
chr4 (57-267)||(47807179-47807388)
chr4 (57-273)||(38187648-38187862)
chr4 (57-273)||(51495133-51495348)
chr4 (57-237)||(38940853-38941033)
chr4 (57-237)||(52713047-52713219)
chr4 (57-273)||(1620013-1620230)
chr4 (57-237)||(32012283-32012463)
chr4 (57-235)||(17799119-17799297)
chr4 (137-273)||(28681723-28681859)
chr4 (57-228)||(27750313-27750484)
chr4 (71-274)||(47867882-47868085)
chr4 (73-273)||(48793577-48793773)
chr4 (71-152)||(5234043-5234124)
chr4 (73-273)||(42915534-42915735)
chr4 (133-273)||(2229312-2229452)
chr4 (58-273)||(37911874-37912088)
chr4 (58-228)||(8013081-8013251)
chr4 (140-273)||(39078229-39078361)
chr4 (50-224)||(40553751-40553929)
chr4 (71-230)||(41414601-41414759)
chr4 (71-275)||(14332763-14332964)
chr4 (149-227)||(17236262-17236340)
chr4 (140-274)||(35310688-35310822)
chr4 (50-255)||(38140677-38140882)
chr4 (58-230)||(5064645-5064817)
chr4 (71-228)||(24940368-24940525)
chr4 (71-273)||(4058718-4058917)
chr4 (61-230)||(32410321-32410490)
chr4 (140-248)||(10069769-10069877)
chr4 (140-270)||(8683256-8683386)
chr4 (140-230)||(20281663-20281753)
chr4 (140-273)||(7654689-7654822)
chr4 (133-246)||(26916390-26916503)
chr4 (183-272)||(28668949-28669038)
chr4 (50-118)||(7652125-7652193)
chr4 (71-247)||(20716183-20716359)
chr4 (58-118)||(23978217-23978277)
chr4 (217-273)||(51495372-51495427)
chr4 (58-221)||(47516190-47516353)
chr4 (58-226)||(46070517-46070682)
chr4 (140-273)||(55580742-55580875)
chr4 (50-102)||(17236342-17236394)
chr4 (58-118)||(28142724-28142783)
chr4 (72-171)||(8178288-8178387)
chr4 (183-230)||(40411765-40411812)
chr4 (140-230)||(5483268-5483358)
chr4 (187-273)||(5233947-5234035)
chr4 (71-171)||(1585396-1585496)
chr4 (58-118)||(40411091-40411151)
chr4 (61-117)||(49080250-49080306)
[»] chr1 (76 HSPs)
chr1 (57-273)||(18036531-18036747)
chr1 (57-273)||(23873784-23874000)
chr1 (57-273)||(49924406-49924622)
chr1 (57-275)||(31970264-31970482)
chr1 (57-273)||(40935570-40935786)
chr1 (62-273)||(36383920-36384131)
chr1 (57-274)||(28916472-28916688)
chr1 (57-274)||(44875166-44875383)
chr1 (61-273)||(29488739-29488951)
chr1 (58-273)||(40220044-40220262)
chr1 (57-273)||(43655994-43656210)
chr1 (57-273)||(46949308-46949524)
chr1 (57-278)||(25990735-25990956)
chr1 (57-273)||(40960431-40960647)
chr1 (61-278)||(18852214-18852431)
chr1 (61-273)||(39026202-39026415)
chr1 (58-273)||(26907048-26907261)
chr1 (57-273)||(28017645-28017859)
chr1 (61-273)||(38942397-38942610)
chr1 (57-273)||(18913301-18913519)
chr1 (57-273)||(9128030-9128246)
chr1 (57-270)||(45357835-45358049)
chr1 (57-268)||(35941828-35942039)
chr1 (57-273)||(15285791-15286005)
chr1 (57-273)||(15311165-15311380)
chr1 (58-268)||(35189189-35189400)
chr1 (57-273)||(6848267-6848479)
chr1 (50-235)||(42724079-42724263)
chr1 (57-273)||(26479726-26479943)
chr1 (57-256)||(47996941-47997140)
chr1 (61-273)||(4529178-4529378)
chr1 (188-273)||(36037355-36037440)
chr1 (71-228)||(35884212-35884369)
chr1 (58-273)||(41063733-41063951)
chr1 (60-273)||(44510174-44510386)
chr1 (73-273)||(24728580-24728781)
chr1 (58-247)||(25185283-25185473)
chr1 (61-235)||(7190651-7190825)
chr1 (50-176)||(15912182-15912308)
chr1 (140-230)||(46803668-46803758)
chr1 (140-273)||(24190543-24190675)
chr1 (140-273)||(32983127-32983258)
chr1 (50-151)||(44056377-44056478)
chr1 (140-273)||(44148790-44148923)
chr1 (71-223)||(3861699-3861849)
chr1 (58-255)||(5950431-5950628)
chr1 (71-273)||(15959596-15959796)
chr1 (58-239)||(7397698-7397879)
chr1 (73-195)||(37735415-37735537)
chr1 (71-247)||(45226143-45226319)
chr1 (71-223)||(39932576-39932728)
chr1 (133-273)||(50176589-50176728)
chr1 (140-274)||(37538883-37539017)
chr1 (133-273)||(3874974-3875111)
chr1 (71-273)||(28016701-28016900)
chr1 (140-228)||(2126112-2126200)
chr1 (71-230)||(6785461-6785619)
chr1 (71-234)||(42965809-42965970)
chr1 (140-230)||(35366200-35366290)
chr1 (50-171)||(51338953-51339075)
chr1 (50-175)||(51840547-51840673)
chr1 (140-230)||(52985007-52985097)
chr1 (140-273)||(11241101-11241233)
chr1 (71-266)||(32623969-32624161)
chr1 (58-194)||(5858404-5858540)
chr1 (71-230)||(33369558-33369714)
chr1 (140-228)||(52841444-52841532)
chr1 (63-118)||(13351677-13351732)
chr1 (71-230)||(39555583-39555742)
chr1 (140-230)||(6786912-6787002)
chr1 (78-255)||(7875912-7876091)
chr1 (140-226)||(13291863-13291949)
chr1 (202-274)||(39150811-39150880)
chr1 (71-152)||(16854145-16854226)
chr1 (140-273)||(16688210-16688339)
chr1 (71-99)||(46542989-46543017)
[»] chr2 (58 HSPs)
chr2 (57-274)||(792308-792525)
chr2 (57-273)||(14565326-14565542)
chr2 (62-273)||(18833862-18834074)
chr2 (57-273)||(21539744-21539960)
chr2 (57-273)||(33635323-33635539)
chr2 (57-273)||(8784382-8784599)
chr2 (58-273)||(10478166-10478381)
chr2 (58-264)||(13822729-13822938)
chr2 (57-271)||(5091495-5091709)
chr2 (52-273)||(15068717-15068939)
chr2 (57-273)||(38549596-38549812)
chr2 (57-273)||(43451492-43451708)
chr2 (57-273)||(29514428-29514644)
chr2 (57-273)||(35832399-35832615)
chr2 (57-273)||(4091998-4092214)
chr2 (57-273)||(43075737-43075952)
chr2 (57-273)||(44803885-44804101)
chr2 (51-278)||(9294636-9294864)
chr2 (57-275)||(29513971-29514188)
chr2 (98-273)||(10979197-10979372)
chr2 (57-274)||(28424261-28424477)
chr2 (61-262)||(28492511-28492712)
chr2 (108-273)||(38071403-38071568)
chr2 (57-223)||(4033678-4033844)
chr2 (58-238)||(32010094-32010274)
chr2 (173-273)||(15858642-15858742)
chr2 (71-273)||(3201331-3201534)
chr2 (140-235)||(33932914-33933009)
chr2 (58-118)||(22162308-22162368)
chr2 (58-274)||(26998309-26998529)
chr2 (73-273)||(29523994-29524194)
chr2 (71-276)||(45660370-45660577)
chr2 (132-273)||(6765887-6766027)
chr2 (140-273)||(8701676-8701808)
chr2 (132-247)||(921525-921640)
chr2 (71-273)||(35517128-35517330)
chr2 (140-237)||(35022973-35023069)
chr2 (140-276)||(40808667-40808805)
chr2 (140-274)||(6110147-6110285)
chr2 (140-273)||(11617098-11617234)
chr2 (52-114)||(12872106-12872168)
chr2 (73-247)||(25572053-25572225)
chr2 (61-230)||(32273666-32273839)
chr2 (140-273)||(45085331-45085463)
chr2 (58-118)||(20380115-20380175)
chr2 (140-275)||(19264174-19264311)
chr2 (58-228)||(38070988-38071157)
chr2 (187-273)||(38564670-38564756)
chr2 (73-230)||(12938249-12938406)
chr2 (57-93)||(15858743-15858779)
chr2 (159-235)||(23987015-23987091)
chr2 (140-230)||(9864714-9864805)
chr2 (207-273)||(28858453-28858520)
chr2 (58-156)||(44442123-44442221)
chr2 (140-230)||(28599144-28599234)
chr2 (58-118)||(9709506-9709565)
chr2 (13-41)||(14565570-14565598)
chr2 (74-230)||(33198627-33198783)
[»] chr3 (81 HSPs)
chr3 (50-273)||(36188922-36189145)
chr3 (13-276)||(52251980-52252240)
chr3 (57-273)||(26641028-26641244)
chr3 (57-273)||(53020171-53020387)
chr3 (57-273)||(55400726-55400942)
chr3 (57-273)||(46295992-46296209)
chr3 (57-273)||(21654233-21654449)
chr3 (58-274)||(51309402-51309619)
chr3 (58-273)||(32322155-32322370)
chr3 (61-275)||(31126204-31126418)
chr3 (61-266)||(46580528-46580732)
chr3 (57-274)||(49068039-49068256)
chr3 (57-273)||(51255174-51255390)
chr3 (87-265)||(45347637-45347815)
chr3 (57-273)||(37323999-37324216)
chr3 (72-273)||(28793165-28793362)
chr3 (57-259)||(43575945-43576147)
chr3 (57-273)||(51426607-51426823)
chr3 (57-256)||(1335098-1335297)
chr3 (13-229)||(34105476-34105697)
chr3 (95-273)||(34022625-34022803)
chr3 (57-273)||(16739081-16739287)
chr3 (50-273)||(7886530-7886753)
chr3 (57-264)||(46820037-46820229)
chr3 (57-221)||(45781385-45781549)
chr3 (57-188)||(23513555-23513686)
chr3 (104-247)||(30612213-30612356)
chr3 (57-171)||(52172028-52172142)
chr3 (134-258)||(46303643-46303767)
chr3 (71-271)||(47864200-47864400)
chr3 (71-277)||(7866390-7866598)
chr3 (71-273)||(50650951-50651152)
chr3 (50-273)||(23209194-23209416)
chr3 (71-230)||(35963161-35963320)
chr3 (58-224)||(30454687-30454852)
chr3 (71-273)||(37042330-37042532)
chr3 (58-230)||(22479010-22479182)
chr3 (58-247)||(21214231-21214423)
chr3 (61-230)||(8096974-8097143)
chr3 (58-230)||(10114901-10115073)
chr3 (73-273)||(26724906-26725104)
chr3 (183-273)||(13541347-13541437)
chr3 (50-233)||(17587696-17587870)
chr3 (58-227)||(22455967-22456136)
chr3 (59-149)||(46303534-46303624)
chr3 (73-273)||(2927300-2927501)
chr3 (58-230)||(10014259-10014431)
chr3 (58-230)||(10252001-10252173)
chr3 (57-118)||(13541265-13541326)
chr3 (58-255)||(34194878-34195074)
chr3 (140-255)||(36546620-36546734)
chr3 (140-255)||(36561581-36561695)
chr3 (72-230)||(25242134-25242292)
chr3 (140-273)||(26208092-26208226)
chr3 (58-255)||(2994347-2994546)
chr3 (58-247)||(38401370-38401563)
chr3 (206-274)||(54725534-54725601)
chr3 (58-228)||(47443932-47444101)
chr3 (140-272)||(9264629-9264756)
chr3 (192-273)||(20626665-20626745)
chr3 (90-235)||(31292634-31292778)
chr3 (140-273)||(37075038-37075171)
chr3 (71-247)||(14752147-14752323)
chr3 (140-228)||(28875484-28875572)
chr3 (50-150)||(49068543-49068643)
chr3 (183-273)||(54464808-54464899)
chr3 (183-273)||(11054224-11054314)
chr3 (140-273)||(23311508-23311639)
chr3 (140-230)||(31836997-31837087)
chr3 (71-169)||(34722622-34722720)
chr3 (58-116)||(48291812-48291870)
chr3 (71-156)||(6438092-6438177)
chr3 (71-175)||(20847279-20847383)
chr3 (187-273)||(23514559-23514646)
chr3 (207-273)||(23910424-23910492)
chr3 (186-267)||(27875849-27875930)
chr3 (140-273)||(30189649-30189782)
chr3 (207-247)||(579084-579124)
chr3 (140-255)||(41476266-41476382)
chr3 (58-118)||(49583955-49584015)
chr3 (58-118)||(54725671-54725731)
[»] chr5 (45 HSPs)
chr5 (57-274)||(42365024-42365241)
chr5 (57-275)||(8541516-8541734)
chr5 (57-273)||(20914848-20915064)
chr5 (62-273)||(24439566-24439777)
chr5 (57-273)||(31690574-31690790)
chr5 (57-273)||(31316755-31316971)
chr5 (57-276)||(8145964-8146183)
chr5 (58-273)||(16286037-16286252)
chr5 (57-273)||(24432354-24432570)
chr5 (57-273)||(13146718-13146934)
chr5 (57-273)||(35462673-35462888)
chr5 (57-273)||(25962402-25962622)
chr5 (58-237)||(37066213-37066392)
chr5 (50-266)||(2002096-2002310)
chr5 (61-273)||(12638882-12639093)
chr5 (59-273)||(8143925-8144139)
chr5 (57-273)||(30086500-30086718)
chr5 (160-273)||(36413890-36414003)
chr5 (71-273)||(42273654-42273852)
chr5 (73-273)||(25840871-25841071)
chr5 (59-230)||(32079498-32079668)
chr5 (61-176)||(17825249-17825364)
chr5 (140-277)||(37562714-37562849)
chr5 (61-232)||(12912290-12912460)
chr5 (58-273)||(8506429-8506634)
chr5 (140-273)||(20644088-20644222)
chr5 (71-247)||(20039107-20039283)
chr5 (71-268)||(43589921-43590118)
chr5 (133-196)||(20452467-20452530)
chr5 (71-230)||(34425336-34425494)
chr5 (140-224)||(37522592-37522676)
chr5 (183-273)||(12792741-12792830)
chr5 (204-277)||(30703739-30703809)
chr5 (133-264)||(30893214-30893344)
chr5 (58-234)||(16153338-16153514)
chr5 (208-273)||(9957390-9957454)
chr5 (58-194)||(6391861-6391997)
chr5 (58-193)||(8959632-8959767)
chr5 (74-230)||(43454320-43454476)
chr5 (71-273)||(6686389-6686592)
chr5 (71-278)||(11261834-11262040)
chr5 (73-228)||(17351395-17351550)
chr5 (140-227)||(42072648-42072735)
chr5 (58-100)||(1144624-1144666)
chr5 (199-255)||(29307159-29307215)
[»] chr8 (66 HSPs)
chr8 (57-273)||(11992718-11992934)
chr8 (57-273)||(27621120-27621336)
chr8 (57-273)||(27752576-27752792)
chr8 (57-273)||(34713518-34713734)
chr8 (57-273)||(35260047-35260263)
chr8 (57-273)||(3099943-3100159)
chr8 (57-274)||(31132985-31133200)
chr8 (13-273)||(2238550-2238808)
chr8 (61-273)||(11044051-11044263)
chr8 (57-273)||(44411164-44411380)
chr8 (57-267)||(44052611-44052821)
chr8 (52-266)||(41426324-41426538)
chr8 (61-273)||(37598064-37598275)
chr8 (50-273)||(24510652-24510873)
chr8 (57-273)||(25321541-25321757)
chr8 (61-273)||(35344361-35344574)
chr8 (57-275)||(39187223-39187438)
chr8 (57-273)||(32678472-32678680)
chr8 (57-273)||(24612432-24612651)
chr8 (57-277)||(35346256-35346475)
chr8 (57-208)||(37567451-37567602)
chr8 (57-208)||(44358511-44358662)
chr8 (57-247)||(36538048-36538238)
chr8 (57-208)||(33851043-33851194)
chr8 (57-273)||(27740596-27740808)
chr8 (50-230)||(34899907-34900087)
chr8 (50-208)||(16643366-16643524)
chr8 (58-228)||(41362307-41362477)
chr8 (140-230)||(6401692-6401782)
chr8 (50-220)||(27819641-27819811)
chr8 (50-228)||(8745565-8745743)
chr8 (133-228)||(8712589-8712684)
chr8 (71-274)||(34890127-34890331)
chr8 (70-273)||(26483534-26483736)
chr8 (71-230)||(43216345-43216504)
chr8 (71-273)||(7858531-7858735)
chr8 (71-255)||(36190775-36190959)
chr8 (58-244)||(17336732-17336918)
chr8 (71-234)||(41086380-41086543)
chr8 (152-273)||(12108240-12108362)
chr8 (58-194)||(8673371-8673507)
chr8 (140-273)||(38072235-38072368)
chr8 (133-273)||(5217457-5217595)
chr8 (61-125)||(12108163-12108227)
chr8 (140-224)||(15824641-15824725)
chr8 (213-272)||(37566453-37566512)
chr8 (58-247)||(17314820-17315009)
chr8 (58-260)||(17713213-17713415)
chr8 (140-230)||(29920266-29920356)
chr8 (58-238)||(2628154-2628334)
chr8 (58-118)||(25195156-25195216)
chr8 (95-203)||(40486517-40486625)
chr8 (50-118)||(41791570-41791638)
chr8 (72-273)||(8711881-8712074)
chr8 (140-273)||(13143903-13144034)
chr8 (112-230)||(16358110-16358227)
chr8 (50-112)||(16635426-16635488)
chr8 (50-112)||(16635694-16635756)
chr8 (72-171)||(29147294-29147393)
chr8 (50-112)||(16635558-16635620)
chr8 (70-100)||(17749693-17749723)
chr8 (183-276)||(2052978-2053071)
chr8 (71-239)||(8709775-8709941)
chr8 (71-156)||(34158363-34158448)
chr8 (183-273)||(24892956-24893044)
chr8 (71-215)||(35456038-35456181)
[»] chr6 (31 HSPs)
chr6 (61-273)||(30766437-30766649)
chr6 (57-273)||(10227899-10228115)
chr6 (61-273)||(17721763-17721975)
chr6 (57-273)||(30949122-30949338)
chr6 (61-274)||(374090-374303)
chr6 (61-273)||(12278697-12278909)
chr6 (13-258)||(32882660-32882907)
chr6 (57-277)||(31887070-31887291)
chr6 (50-258)||(21963938-21964145)
chr6 (145-273)||(5121410-5121538)
chr6 (59-227)||(17598282-17598450)
chr6 (73-273)||(7274829-7275029)
chr6 (133-273)||(21542485-21542625)
chr6 (61-208)||(33756247-33756394)
chr6 (71-273)||(3095674-3095875)
chr6 (71-273)||(11082199-11082401)
chr6 (70-274)||(35129007-35129212)
chr6 (135-273)||(5821989-5822126)
chr6 (50-175)||(5881804-5881929)
chr6 (58-118)||(3888417-3888477)
chr6 (58-247)||(4031977-4032168)
chr6 (61-194)||(16524373-16524505)
chr6 (58-194)||(4987933-4988069)
chr6 (50-230)||(16870789-16870970)
chr6 (199-235)||(7163732-7163768)
chr6 (140-266)||(12461390-12461516)
chr6 (222-273)||(17599464-17599515)
chr6 (73-228)||(26298958-26299115)
chr6 (73-228)||(30794191-30794346)
chr6 (183-272)||(34177596-34177685)
chr6 (58-118)||(5300702-5300762)
[»] scaffold0495 (1 HSPs)
scaffold0495 (62-273)||(4622-4833)
[»] scaffold0009 (2 HSPs)
scaffold0009 (73-273)||(157801-158000)
scaffold0009 (73-171)||(52658-52756)
[»] scaffold0442 (1 HSPs)
scaffold0442 (74-273)||(10053-10251)
[»] scaffold0565 (1 HSPs)
scaffold0565 (52-245)||(5857-6050)
[»] scaffold0300 (1 HSPs)
scaffold0300 (71-274)||(526-729)
[»] scaffold0330 (1 HSPs)
scaffold0330 (58-277)||(3160-3383)
[»] scaffold0010 (1 HSPs)
scaffold0010 (140-273)||(160872-161006)
[»] scaffold1157 (1 HSPs)
scaffold1157 (50-230)||(1657-1840)
[»] scaffold0018 (1 HSPs)
scaffold0018 (140-228)||(154935-155022)
[»] scaffold0045 (1 HSPs)
scaffold0045 (140-273)||(78031-78167)


Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 272 - 494
Target Start/End: Original strand, 37165316 - 37165537
Alignment:
Q  272 tacataatttgaatgcacttttgatcctctgtatttcttgaatcagaatttagtctttccatttaaaatttgagatttttgatttgcatgtttcacacat 371  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37165316 tacataatttgaatgcacttttgatcctctatatttcttgaatcagaatttagtctttccatttaaaatttgagatttttgatttgcatgtttcacacat 37165415  T
Q  372 tggtacaattttagtccaatccatatatttaagacccaaacatgttgttttagctctcaaaagtggtaattgtttgccacgacttggaattcgaagagat 471  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37165416 tggtacaattttagtccaatccatata-ttaagacccaaacatgttgttttagctctcaaaagtggtaattgtttgccacgacttggaattcgaagagat 37165514  T
Q  472 aacatgaagaattatcaattttg 494  Q
    |||||||||||||||||||||||    
T  37165515 aacatgaagaattatcaattttg 37165537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 51 - 273
Target Start/End: Complemental strand, 35084235 - 35084012
Alignment:
Q  51 aaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttta 150  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||| ||||||||||||||||||    
T  35084235 aaaaatcatcctttccaaagtaaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattgttttta 35084136  T
Q  151 catctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgt-attttttac 249  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||  |||||| |    
T  35084135 catctttttatgaaacttatttcaagaagaacacaaaaaactataactcaaattactgtgttttagttttcttattaagtgtgaatttgtgtttttttgc 35084036  T
Q  250 ttataaattaggacggagggagta 273  Q
    ||||||||| ||||||||||||||    
T  35084035 ttataaattgggacggagggagta 35084012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 43108033 - 43107817
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  43108033 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 43107934  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||| | |||||| || |||||| ||||||||    
T  43107933 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaa 43107834  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  43107833 ttaggacggagggagta 43107817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 58 - 276
Target Start/End: Original strand, 33153026 - 33153244
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| ||||  |||||||||||||||||||||||||    
T  33153026 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattgtttttacatcttt 33153125  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaat 257  Q
      || ||| ||||| ||||||||| |||||||| ||||  ||||| || |||||||| ||||| ||||||||| ||||||| ||||||||||||||||||    
T  33153126 ccataaaatttatttcaagaagaacacaaaaaattatacttcaaactattatgtttttgtttttttaataagtgtgaatttatattttttacttataaat 33153225  T
Q  258 taggacggagggagtacat 276  Q
    | ||||||||| |||||||    
T  33153226 tgggacggaggaagtacat 33153244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 57 - 275
Target Start/End: Original strand, 35181178 - 35181396
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  35181178 catctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatttttacatctt 35181277  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| | || || |||||||||||||||||| |||||| || |||||| ||||||||    
T  35181278 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcagtaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 35181377  T
Q  257 ttaggacggagggagtaca 275  Q
    |||||||||||||||||||    
T  35181378 ttaggacggagggagtaca 35181396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 23106439 - 23106655
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  23106439 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 23106538  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||  ||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| ||||||||| ||||||||    
T  23106539 tccatgaaacttattttaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaa 23106638  T
Q  257 ttaggacggagggagta 273  Q
    ||| |||||||||||||    
T  23106639 ttaagacggagggagta 23106655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 13 - 273
Target Start/End: Complemental strand, 29236239 - 29235981
Alignment:
Q  13 aatataagcaaaaaagactaacttttatgnnnnnnnnaaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctccttttta 112  Q
    |||||||||||||||||| ||||||||||        |||||| |||||||| | ||||||||||||||  |||||||||| ||||| ||||||||||||    
T  29236239 aatataagcaaaaaagaccaacttttatgttatttcaaaaaaatcatcttttacgaagtaaaattaaatataaattgcattcaattt-ttctccttttta 29236141  T
Q  113 ttttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgtt 212  Q
    || ||| |||||| ||||  |||||| ||||||||||| || ||| ||||||||||||||||| |||||||||||||| |||| |||||| |||||||||    
T  29236140 ttctctccataatcattaaccaataaaaattgtttttatatatttctatgaaacttattccaaaaagaatacaaaaaattatacctcaaactactatgtt 29236041  T
Q  213 ttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    | | |||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  29236040 tca-ttttcttaatgagtgtgaatttgtgttttttgcttataaattaggacggagggagta 29235981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 48879367 - 48879592
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| |||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||    
T  48879367 aaaaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattttt 48879466  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttac 249  Q
    |||||||| ||| |||||||||||||| ||||||||||||| |||| ||||||| | || || |||||||||||||||||| | |||| || |||||| |    
T  48879467 acatctttctataaaacttattccaaggagaatacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtaaattagtgttttttgc 48879566  T
Q  250 ttataaattaggacggagggagtaca 275  Q
    ||||||||||| ||||| ||||||||    
T  48879567 ttataaattagaacggatggagtaca 48879592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 3157422 - 3157638
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  3157422 catcttttccaatgtaaaattaaatgcaagttgcattcaatttgttttcctttttattttctccataatttttaaccaatgagaattatttttacatctt 3157521  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||  |||| |||||||| |||| ||||||| |||| || ||||||||||||||||||||||||| || |||||| ||||||||    
T  3157522 tccatgaaacttatttcaaagagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtatgaattagtgttttttgcttataaa 3157621  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  3157622 ttaggacggagggagta 3157638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 19933183 - 19932967
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  19933183 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctt 19933084  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| ||||||||  ||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  19933083 tccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 19932984  T
Q  257 ttaggacggagggagta 273  Q
    ||||||||||| |||||    
T  19932983 ttaggacggagagagta 19932967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 18206447 - 18206231
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||  |||  |||| |||||| ||||||||||||    
T  18206447 catctttttcaatgtaaaattaaatgcaagttgtatttaatttgttctcctttttattttttccataatttttaaccaatgagaattatttttacatctt 18206348  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || ||| |||||||||||||| |||||| || |||||| ||||||||    
T  18206347 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaattagtgttttttgcttataaa 18206248  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  18206247 ttaggacggagggagta 18206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 273
Target Start/End: Original strand, 30082295 - 30082553
Alignment:
Q  13 aatataagcaaaaaagactaacttttatgnnnnnnnnaaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctccttttta 112  Q
    |||||||||||||||||| || |||||||        |||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| ||    
T  30082295 aatataagcaaaaaagaccaatttttatgttatttcaaaaaaatcatcttttccaaagtaaaattaaatgcaaattgcattcaatttattctcttttcta 30082394  T
Q  113 ttttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgtt 212  Q
    || ||| |||||| ||||  |||||||||||||||||||||||||| |  ||||||||| |||||| |  ||| |||| |||| |||||| |||||||||    
T  30082395 ttctctccataatcattaaccaataagaattgtttttacatcttttcagaaaacttatttcaagaata--acacaaaattatacctcaaactactatgtt 30082492  T
Q  213 ttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    || ||||||||||||||| ||||||||| |||||| | |||||||| |||| ||| |||||    
T  30082493 tttgttttcttaataagtgtgaatttgtgttttttgcctataaattgggacagagagagta 30082553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 57 - 274
Target Start/End: Original strand, 41889157 - 41889374
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||| || |||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  41889157 catcttttccaatgtaaaattcaaagcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 41889256  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| ||||||||||||| ||||  |||||| |||| || |||||||||||||||||| ||||||  | |||||| ||||||||    
T  41889257 tccatgaaacttatttcaaggagaatacaaaaaattatacatcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaa 41889356  T
Q  257 ttaggacggagggagtac 274  Q
    |||| |||||||||||||    
T  41889357 ttagaacggagggagtac 41889374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 40560368 - 40560584
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  40560368 catcttttccaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 40560467  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    | ||| ||||||||| |||| |||| |||||||| |||| ||||||||| || || |||||||| ||||||||| | ||||  | |||||| ||||||||    
T  40560468 tctataaaacttatttcaaggagaacacaaaaaattatacctcaaattattaagtgttagtttttttaataagtgtaaattaatgttttttgcttataaa 40560567  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  40560568 ttaggacggagggagta 40560584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 47383392 - 47383608
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  47383392 catcttttccaatgtaaaattaaatgtaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 47383491  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||  ||| |||| |||||||| |||| ||||||| | || || ||||||||||||||| || ||||||||| |||||| ||||||||    
T  47383492 tccatgaaacttattttaaggagaacacaaaaaattatatctcaaatcattaagtgttagttttcttaatatgtgtgaatttgtgttttttgcttataaa 47383591  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  47383592 ttaggacggagggagta 47383608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 60 - 273
Target Start/End: Complemental strand, 21654246 - 21654033
Alignment:
Q  60 cttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttt 159  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||  |||  |||| |||||| |||||||||||||      
T  21654246 cttttccaatgtaaaattaaatgcaaattacattcaatttgttctccttttcattttctccataatttttaaccaatgagaattatttttacatctttcc 21654147  T
Q  160 atgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaatta 259  Q
    ||||||||||||||||| |||| ||||||||  ||| ||||| | |||| || |||||||||||||||||| |||||| || |||||| |||||||||||    
T  21654146 atgaaacttattccaaggagaacacaaaaaatgatatctcaagtcactaagtattagttttcttaataagtgtgaattagtgttttttgcttataaatta 21654047  T
Q  260 ggacggagggagta 273  Q
    | ||||||||||||    
T  21654046 gaacggagggagta 21654033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 61 - 258
Target Start/End: Original strand, 28608363 - 28608560
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| ||| ||||||||||   |||||||||||||||||||||||||| |    
T  28608363 ttttccaaagtaaaattaaatgcaaattgcattcaatttgttctcttttctattctctccataataattgaccaataagaattgtttttacatcttttca 28608462  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaatt 258  Q
    ||||||||||| ||||||||  | |||||| ||||  || || ||||||||||| |||||||||| || | |||||||||||||||| ||||||||||    
T  28608463 tgaaacttatttcaagaagaccataaaaaattatacttctaactactatgtttttgttttcttaaaaaatgtgaatttgtatttttttcttataaatt 28608560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 61 - 275
Target Start/End: Original strand, 42617661 - 42617876
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  |    
T  42617661 tttttcaatgtaaaattaaatgcaaattgcattcaatttgtgctcctttttattttctccataatttttaaccaattagaattatttttacatctttcca 42617760  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgt-attttttacttataaatta 259  Q
    |||||||||||||||| |||| |||||||| |||| ||||||| | || || |||||||| ||||||||| |||||| ||  |||||| |||||||||||    
T  42617761 tgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagtttttttaataagtgtgaattagtgtttttttgcttataaatta 42617860  T
Q  260 ggacggagggagtaca 275  Q
    ||||||||||||||||    
T  42617861 ggacggagggagtaca 42617876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 75 - 273
Target Start/End: Original strand, 40593822 - 40594020
Alignment:
Q  75 attaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattcca 174  Q
    |||||||| |||||||||||||||| |||| ||||||||| | | | |||| ||||  |||||||||||||||||||||||||||||||||| ||||| |    
T  40593822 attaaatgtaaattgcatttaatttattctactttttattctatccgtaatcattaaccaataagaattgtttttacatctttttatgaaacatattcta 40593921  T
Q  175 agaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    | || ||||||||||| |||| ||||||  || |||||||  |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||    
T  40593922 ataaaaatacaaaaaattatatctcaaaccaccatgttttttttttcttaataaatgtgaatttgtattttttgcttataaattaggacggagggagta 40594020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 45598890 - 45599109
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  45598890 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 45598989  T
Q  157 tttatgaaacttattccaagaagaatac-aaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtattttttacttat 253  Q
    |  |||||||||||| |||| | ||||| |||||| |||| ||||||| |||| || ||||||||||||||||||  |||||  ||| ||||||  ||||    
T  45598990 tccatgaaacttatttcaaggaaaatacaaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgcgaattactgttttttttgtttat 45599089  T
Q  254 aaattaggacggagggagta 273  Q
    ||||||||||||| ||||||    
T  45599090 aaattaggacggaaggagta 45599109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 61 - 273
Target Start/End: Complemental strand, 7989432 - 7989219
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||  |||  |||| |||||| |||||||||||||  |    
T  7989432 tttttcaatgtaaaattaaatgcaagttgcattcaatttgttatcctttttattttcttcataatttttaaccaatgagaattatttttacatctttcca 7989333  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtattttttacttataaatt 258  Q
    ||||| |||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  ||| ||||||||||||||| |    
T  7989332 tgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgt-ttttttacttataaaat 7989234  T
Q  259 aggacggagggagta 273  Q
    || ||||||||||||    
T  7989233 agaacggagggagta 7989219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 57 - 270
Target Start/End: Complemental strand, 48938017 - 48937805
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||  |||  ||||||||||| ||||||||||||    
T  48938017 catcttttccaatgtaaaattaaatacaaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattatttttacatctt 48937918  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  || |||||||||||||| |||| |||||||| |||| ||| ||  |||| || |  ||||||||||||||||||||||||| ||||||  |||||||    
T  48937917 tccataaaacttattccaaggagaacacaaaaaattatacctc-aaccactaagtgtatgttttcttaataagtatgaatttgtgttttttgtttataaa 48937819  T
Q  257 ttaggacggaggga 270  Q
    ||| ||||||||||    
T  48937818 ttaagacggaggga 48937805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 57 - 270
Target Start/End: Original strand, 23731546 - 23731761
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  ||| ||||  |||||| |||||||||||     
T  23731546 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaatcaacgagaattatttttacatctc 23731645  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattacta--tgttttagttttcttaataagtatgaatttgtattttttacttata 254  Q
    |  ||||||||||||||||| |||| ||||||||  |||  |||||| ||||  |||| ||||||||||||||| | |||||| |  ||||||  |||||    
T  23731646 tccatgaaacttattccaaggagaacacaaaaaatcatacatcaaatcactaagtgttatagttttcttaataaatgtgaattagcgttttttttttata 23731745  T
Q  255 aattaggacggaggga 270  Q
    ||||||||||||||||    
T  23731746 aattaggacggaggga 23731761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 57 - 236
Target Start/End: Original strand, 34808205 - 34808384
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||  |||  ||||||||||| ||||||||||||    
T  34808205 catctttttcaacgtaaaattaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaataagaattatttttacatctt 34808304  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaat 236  Q
    |  ||||||||| |||||||||||| |||||||| |||| ||||||| |||| || |||||||||||| ||||| |||||    
T  34808305 tccatgaaactttttccaagaagaacacaaaaaattatacctcaaatcactaagtattagttttcttactaagtgtgaat 34808384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 61 - 260
Target Start/End: Complemental strand, 41815817 - 41815618
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| ||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  |    
T  41815817 ttttccaatgtaaaattaaatgtaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 41815718  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    | |||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| | ||||  |||||||| ||||||||||||    
T  41815717 taaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtcaattattattttttgcttataaattag 41815618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 57 - 228
Target Start/End: Complemental strand, 19964322 - 19964151
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  19964322 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctt 19964223  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |  ||||||||||||||||| |||| ||||||||  ||| ||||||| |||| || ||||||||||||||||    
T  19964222 tccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataa 19964151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 61 - 266
Target Start/End: Complemental strand, 22111454 - 22111248
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  |    
T  22111454 tttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 22111355  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatt-ttttacttataaatta 259  Q
      ||| |||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || || |||| |||||||||||    
T  22111354 gaaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttattttgcttataaatta 22111255  T
Q  260 ggacgga 266  Q
    |||||||    
T  22111254 ggacgga 22111248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 61 - 266
Target Start/End: Original strand, 40583135 - 40583341
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  |    
T  40583135 tttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 40583234  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatt-ttttacttataaatta 259  Q
      ||| |||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || || |||| |||||||||||    
T  40583235 gaaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttattttgcttataaatta 40583334  T
Q  260 ggacgga 266  Q
    |||||||    
T  40583335 ggacgga 40583341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 32491235 - 32491019
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||  |||  |||| | |||| ||||||||||||    
T  32491235 catcttttcgaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttgttttctccataatttttaaccaatgaaaattatttttacatctt 32491136  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||  ||| |||| |||||||| ||||  |||||| || | || |||||||||||||||| | |||||| || |||||| ||||||||    
T  32491135 tccatgaaacttattataaggagaacacaaaaaattatacatcaaatcaccaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaa 32491036  T
Q  257 ttaggacggagggagta 273  Q
    |||||| |||| |||||    
T  32491035 ttaggatggagagagta 32491019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 44600432 - 44600648
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||  |||||||||||||||| ||||||| ||||||||||| ||||| |||||| ||||||  |||  |||| | |||| ||||||||||||    
T  44600432 catcttttccagtgtaaaattaaatgcaagttgcattcaatttgttctcttttttgttttctccataatttttaaccaatgaaaattatttttacatctt 44600531  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |   |||||||||||| ||| |||| |||||||| |||| |||||||  ||| || |||||||||||||||| | |||||| ||||||||| ||||||||    
T  44600532 tccttgaaacttattctaaggagaacacaaaaaattatacctcaaatcgctaagtgttagttttcttaataaatgtgaattagtattttttgcttataaa 44600631  T
Q  257 ttaggacggagggagta 273  Q
    |||| ||||||| ||||    
T  44600632 ttagaacggaggaagta 44600648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 13 - 266
Target Start/End: Complemental strand, 18800946 - 18800686
Alignment:
Q  13 aatataagcaaaaaagactaacttttatgnnnnnnnnaaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctccttttta 112  Q
    ||||||||||||||||||  |||||||||        | |||| |||||||| ||||||||||||||||| |||||||||| |||||| |||  ||| ||    
T  18800946 aatataagcaaaaaagacatacttttatgttatttcaagaaaatcatctttttcaaagtaaaattaaatgtaaattgcattcaatttgctcttatttcta 18800847  T
Q  113 ttttcttcataataattattca-------ataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaatta 205  Q
    ||  || |||||| |||| |||       |||||||||||||||||||||||  |||||| |||||| ||||| ||||||||| | |||  |||||| ||    
T  18800846 ttccctccataatcattaatcattaaccaataagaattgtttttacatctttccatgaaatttattctaagaaaaatacaaaatattatgtctcaaacta 18800747  T
Q  206 ctatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacgga 266  Q
    |||| ||||  |||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  18800746 ctatatttttattttcttaataagtgtgaatttgtattttttgcttataaattgggacgga 18800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 96 - 273
Target Start/End: Original strand, 9818493 - 9818670
Alignment:
Q  96 atttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactata 195  Q
    ||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  || |||||||||||||| |||| | |||||| ||||    
T  9818493 atttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaacttattccaaggagaacataaaaaattata 9818592  T
Q  196 actcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
     ||||||| ||||  | |||||||||||||||||| |||||| || ||||| |||||||||||| |||||||||||||    
T  9818593 cctcaaatcactaaatgttagttttcttaataagtgtgaattagtgtttttgacttataaattacgacggagggagta 9818670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 96 - 273
Target Start/End: Original strand, 10720418 - 10720595
Alignment:
Q  96 atttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactata 195  Q
    ||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  || |||||||||||||| |||| | |||||| ||||    
T  10720418 atttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaacttattccaaggagaacataaaaaattata 10720517  T
Q  196 actcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
     ||||||| ||||  | |||||||||||||||||| |||||| || ||||| |||||||||||| |||||||||||||    
T  10720518 cctcaaatcactaaatgttagttttcttaataagtgtgaattagtgtttttgacttataaattacgacggagggagta 10720595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 57 - 267
Target Start/End: Complemental strand, 41890370 - 41890162
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||  || ||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||  ||| | ||| |||||| |||||| |||||    
T  41890370 catcttttttaatgtaaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaattaatgagaattattttta-atctt 41890272  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| |||||||| |||| | ||||| | ||  | |||||||||||||||||| |||||| || |||||| ||||||||    
T  41890271 tccatgaaacttatttcaaggagaacacaaaaaattataccccaaatcattaaatgttagttttcttaataagtttgaattagtgtttttt-cttataaa 41890173  T
Q  257 ttaggacggag 267  Q
    |||||||||||    
T  41890172 ttaggacggag 41890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 57 - 237
Target Start/End: Original strand, 36576404 - 36576582
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||  |||  |||| | |||| ||||||||||||    
T  36576404 catcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgaaaattatttttacatctt 36576503  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt 237  Q
    |  ||||||||||||| ||| |||| |||||||| |||| ||||||| |||| || ||||||||||| |||||| ||||||    
T  36576504 tccatgaaacttattctaaggagaa-acaaaaaattatacctcaaatcactaagtgttagttttctt-ataagtgtgaatt 36576582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 28843651 - 28843437
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||||||| |||||||||||  ||||| ||||||||||  ||| |||| |||| ||| |||||| |||| ||||||||||||||||||    
T  28843651 aaaaaatcatcttttccaaaataaaattaaatataaattacatttaattttatctactttctattctctccataatcattaatcaataagaattgttttt 28843552  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttac 249  Q
     |       ||| |||||||||||||||| |  |||||||| |||| |||||| |||||||||||  || | ||||||||  ||||||  |||||| | |    
T  28843551 cc-------tataaaacttattccaagaaaatcacaaaaaattatacctcaaactactatgtttttattgttttaataagcgtgaatt--tattttattc 28843461  T
Q  250 ttataaattaggacggagggagta 273  Q
    | ||||||| ||||||||||||||    
T  28843460 taataaattgggacggagggagta 28843437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 58 - 230
Target Start/End: Original strand, 38260308 - 38260480
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||||  ||||||||||||||| ||||||||||||| ||||  ||| |||||||  ||||||| ||  |||| | |||| |||||||| ||||    
T  38260308 atcttttccaaatgaaaattaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaacttt 38260407  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
     ||| ||||||||| |||||| || |||||||||||||   |||| ||| |||||||| |||| |||||||||    
T  38260408 ctataaaacttatttcaagaataacacaaaaaactatattacaaactacaatgttttaatttttttaataagt 38260480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 48943043 - 48942943
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||  |||  ||||||||||| ||||||||||||    
T  48943043 catcttttccaatgtaaaattaaatacaaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattatttttacatctt 48942944  T
Q  157 t 157  Q
    |    
T  48942943 t 48942943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 202
Target Start/End: Complemental strand, 48339397 - 48339245
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||| |||| |||| |||||||| |||||| | |     |||||||||  ||||    
T  48339397 aaaaaactatcttttccaaactaaaattaaatgcaaactgcatttaatttattcttctttctattttctccataatcaatcacagataagaattactttt 48339298  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaa 202  Q
    |||| |||| | |||||||||||||| ||||| ||  ||||||||| ||||||    
T  48339297 acattttttcaagaaacttattccaataagaacacgcaaaactatacctcaaa 48339245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 14805875 - 14806076
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  14805875 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 14805974  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    || ||||| ||||||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| || |||||||||||    
T  14805975 tcaaagaa-aatacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggacggaggga 14806073  T
Q  271 gta 273  Q
    |||    
T  14806074 gta 14806076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 15252869 - 15253070
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  15252869 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 15252968  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    || ||||| ||||||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| || |||||||||||    
T  15252969 tcaaagaa-aatacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggacggaggga 15253067  T
Q  271 gta 273  Q
    |||    
T  15253068 gta 15253070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 270
Target Start/End: Original strand, 35923257 - 35923455
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||||||||||||||||| ||| |||||| |    
T  35923257 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 35923356  T
Q  171 tccaagaagaataca-aaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggg 269  Q
    |||||  |||| ||| ||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||||||||||| |||||||||||||    
T  35923357 tccaa--agaaaacacaaaaactatactccaaatttttatgttttagttttcttaataagtgtgatttttatttttttacttataatttaggacggaggg 35923454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 25737782 - 25737580
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  25737782 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 25737683  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    |||||  | || ||| ||||||||| | ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| || |||||||||||    
T  25737682 tccaaagaaaacacacaaaactataccccaaatttttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggacggaggga 25737583  T
Q  271 gta 273  Q
    |||    
T  25737582 gta 25737580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 39348776 - 39348836
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  39348776 atcttttccaaagtaaaattaaatgcaaattgtattcaatttgttctcctttctattttct 39348836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 39337509 - 39337584
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat 125  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||| || |||||||||||| |||||||| ||||||    
T  39337509 aaaaaatcatcttttccaaattaaaactaaatgcaaattgcattcaaattgttctcctttctattttctccataat 39337584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 31769130 - 31769017
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| ||||||||||||  ||||| || || ||||| | |||||||||||||||||    
T  31769130 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctcatttttattttctctataatcaacta-tcaatgaaaattgtttttacatctt 31769032  T
Q  157 tttatgaaacttatt 171  Q
      ||| |||||||||    
T  31769031 cctataaaacttatt 31769017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 58 - 230
Target Start/End: Complemental strand, 35888137 - 35887965
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||| ||||||||| |||||| |||||| |||| ||||||||||||  ||||| || || | ||| | |||||||||||||||||    
T  35888137 atcttttccaaaggaaaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataatcaactact-aatgaaaattgtttttacatctt 35888039  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
      ||| ||| ||||| |||  | || |||||||| |||    |||| ||||||||||||||||| |||||||||    
T  35888038 cctataaaagttatttcaaagataacacaaaaaattatgttacaaactactatgttttagtttttttaataagt 35887965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 46760343 - 46760210
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||||||  ||| |||||| || |||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||     
T  46760343 aattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattttt 46760244  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
      |||||| ||||||| || ||||||||||||||    
T  46760243 gtttttttgcttataatttgggacggagggagta 46760210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 22632096 - 22632296
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| ||||||||||  ||||  ||  ||||| | |||||  | ||| |||| | |||||||||||||||||   ||||||||||||     
T  22632096 aaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttattt 22632195  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||  | || ||||||| ||||    |||| |  |||| ||||||||||||||||||| ||| |||   |||||||||||||| || |||||||||||||    
T  22632196 caaagaaaacacaaaaatctatgctacaaacttttatgctttagttttcttaataagtgtgatttttatttttttacttataatttgggacggagggagt 22632295  T
Q  273 a 273  Q
    |    
T  22632296 a 22632296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 276
Target Start/End: Original strand, 6191050 - 6191252
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||| ||||| ||||||||||  ||||  ||| ||||||| |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  6191050 taaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 6191149  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    |  ||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| || ||||  |||||    
T  6191150 ttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttt---ttttttccttataatttgggacaaaggga 6191246  T
Q  271 gtacat 276  Q
    ||||||    
T  6191247 gtacat 6191252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 18102604 - 18102737
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||||||  ||| |||||| || |||  | || |||||||| ||||   ||||||  |||||||||||||||||||||||| ||| |||     
T  18102604 aattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgattttt 18102703  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | |||||| ||||||| || |||| |||||||||    
T  18102704 ttttttttgcttataatttgggacagagggagta 18102737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 28941325 - 28941277
Alignment:
Q  52 aaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttg 100  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  28941325 aaaaccatcttttccaaagtgaaattaaatgcaaattgcattaaatttg 28941277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 274
Target Start/End: Original strand, 45485960 - 45486163
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||| ||||||||||||  ||| |||||| |    
T  45485960 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttt 45486059  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    |||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| || ||| |||| ||    
T  45486060 tccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggatggagaga 45486159  T
Q  271 gtac 274  Q
    ||||    
T  45486160 gtac 45486163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 37767187 - 37767139
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcc 106  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  37767187 atcttttccaaaatgaaattaagtgcaaattgcatttaatttgttctcc 37767139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 6882384 - 6882439
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctc 105  Q
    |||||| ||| |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  6882384 aaaaaatcatatttttcaaagaaaaattaaatgaaaattgcatttaatttgttctc 6882439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 25944581 - 25944784
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||||||||| | |||||  | |   |||| | |||||||||||||||||  ||| |||||| |    
T  25944581 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 25944680  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga-atttgtattttttacttataaattaggacggaggg 269  Q
    |||||  | || |||||||  ||||   ||||||  ||| |||||||||||||||||||| | |  ||| | |||||| ||||||| |||| ||||||||    
T  25944681 tccaaagaaaacacaaaaacttatactccaaattcttatattttagttttcttaataagtgttattttttttttttttgcttataatttagaacggaggg 25944780  T
Q  270 agta 273  Q
    ||||    
T  25944781 agta 25944784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 19912855 - 19912722
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||| ||  ||| |||||| ||||||  | || |||||||||||||   ||||||  |||||||||||||||||||||| | ||| |||     
T  19912855 aattgtttttacattttactataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgattttt 19912756  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
      | ||||  |||||| || ||||||||||||||    
T  19912755 gttcttttgtttataatttgggacggagggagta 19912722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 47779611 - 47779768
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| ||||||||||  |||   ||||||||| | |||||  | |   |||| | |||||||||||||||||   |||||||||||||    
T  47779611 aaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccatgaaacttattc 47779710  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
     ||  | || ||||||||||||    ||||||  |||| |||||||||||||||||||    
T  47779711 taaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagt 47779768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 2633363 - 2633290
Alignment:
Q  200 aaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagtac 274  Q
    |||||| |||||||||||||||||||||| | |||||| || |||||| ||||||| || ||| ||||| |||||    
T  2633363 aaattattatgttttagttttcttaataaatgtgaattggt-tttttttcttataatttgggatggaggaagtac 2633290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 10248602 - 10248692
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaa-aaaactataactcaaattact-atgttttagttttcttaataa 228  Q
    |||||||||||||||||| ||| ||||||||| |||| | || |||| ||||||||    |||| |||| |||||||||||||||||||||    
T  10248602 aattgtttttacatctttctataaaacttatttcaaggataacacaagaaaactatgttacaaactactaatgttttagttttcttaataa 10248692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 16917545 - 16917635
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||||||||||   ||||||||||||||||  | || ||||||   ||||  |||||||  ||||||||| ||||||||||||||    
T  16917545 aattgtttttacatcttcccatgaaacttattccaaagaaaaaacaaaatgttatatttcaaatttttatgttttaattttcttaataagt 16917635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 228
Target Start/End: Original strand, 39170527 - 39170696
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    |||||||| |||| ||||||||||||||| |||||| |||||| | ||  ||| |||||||  ||||| | |    ||| | |||||||||||||||||     
T  39170527 atcttttcaaaag-aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttc 39170625  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
     ||| ||||||||| |||| | || |||| |||||||    |||| |||||| ||||| ||||||||||||    
T  39170626 gtataaaacttatttcaaggataacacaataaactatgttacaaactactatattttaattttcttaataa 39170696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 2610591 - 2610544
Alignment:
Q  219 ttcttaataagtatgaatttgtattttttacttataaattaggacggag 267  Q
    |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  2610591 ttcttaataagtgt-aatttgaattttttacttataatttaggacggag 2610544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 230
Target Start/End: Complemental strand, 4910788 - 4910631
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||| | ||  |||| | |||| ||||||||||||  ||| |||||| |    
T  4910788 taaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctataaaactttt 4910689  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    || |  ||||| ||| |||| ||||  |||||||  |||||||||||||| | |||||||    
T  4910688 tcta--aagaaaacacaaaaatatacttcaaattcttatgttttagttttttaaataagt 4910631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 12632430 - 12632342
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |||||||||||||||||  |||||||||| || |||  | || | |||||||||||   ||||||  ||||||||| ||||||||||||    
T  12632430 aattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaaactatactccaaattcttatgttttaattttcttaataa 12632342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 1e-73; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 5222436 - 5222212
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    ||||| ||||| |||||||||||||||||    
T  5222436 aaaaaatcattttttccaaagtaaaattaaatgcaaattgcattgaatttgttctcctttttatttttcctataatcattatccaataagaattgttttt 5222337  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgta-tttttta 248  Q
    |||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| || ||||||     
T  5222336 acatttttttatgaaacttatttcaagaagaacacaaaaaattataactcaaattactatgtattagttttcttaataagtgtgaatttatatttttttg 5222237  T
Q  249 cttataaattaggacggagggagta 273  Q
    ||||||||||  |||||||||||||    
T  5222236 cttataaattgagacggagggagta 5222212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 29180547 - 29180332
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||    
T  29180547 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 29180448  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaat 257  Q
     |||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| |||||||||    
T  29180447 ctatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaat 29180348  T
Q  258 taggacggagggagta 273  Q
    ||||||||||||||||    
T  29180347 taggacggagggagta 29180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 30776619 - 30776404
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||    
T  30776619 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 30776520  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaat 257  Q
      ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| |||||||||    
T  30776519 ccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagttttttttgcttataaat 30776420  T
Q  258 taggacggagggagta 273  Q
    ||||||||||||||||    
T  30776419 taggacggagggagta 30776404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 39970125 - 39969909
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  39970125 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 39970026  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||| ||||||||    
T  39970025 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattactgttttttgcttataaa 39969926  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  39969925 ttaggacggagggagta 39969909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 57 - 269
Target Start/End: Complemental strand, 53677615 - 53677403
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  53677615 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 53677516  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    | ||||||||| |||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||||||||||||    
T  53677515 tctatgaaactcattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttacttataaa 53677416  T
Q  257 ttaggacggaggg 269  Q
    |||||||||||||    
T  53677415 ttaggacggaggg 53677403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 57 - 274
Target Start/End: Original strand, 29899699 - 29899916
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||  |||  |||| |||||| ||||||||||||    
T  29899699 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcacctttttattttcttcatgatttttaaccaatgagaattatttttacatctt 29899798  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  || |||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||| | |||||| || |||||||||||||||    
T  29899799 tccataaaacttattccaaggagaacacaaaaaattatacctcaaatcactacgtgttagttttcttaataaatgtgaattagtgttttttacttataaa 29899898  T
Q  257 ttaggacggagggagtac 274  Q
    ||||||||||||||||||    
T  29899899 ttaggacggagggagtac 29899916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 37788435 - 37788651
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  37788435 catcttttccaatgtaaaattaaatgcaacttgcatttaatttgttctcttttttattttctccataatttttaaccaatgagaattatttttacatctt 37788534  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  |||||||| ||||||||    
T  37788535 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatattttttgcttataaa 37788634  T
Q  257 ttaggacggagggagta 273  Q
    ||||||  |||||||||    
T  37788635 ttaggagagagggagta 37788651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 50768429 - 50768645
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  50768429 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctt 50768528  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| | || |||||||| |||| ||| ||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  50768529 tccatgaaacttattccaaggaaaacacaaaaaattatatctcgaatcactaagtattagttttcttaataagtgtgaattagtgttttttgcttataaa 50768628  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  50768629 ttaggacggagggagta 50768645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 58 - 275
Target Start/End: Original strand, 30777472 - 30777690
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||    
T  30777472 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 30777571  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgt-attttttacttataaa 256  Q
      |||||||||||| |||| |||| |||||||| |||| ||||||| ||||  | |||||||||||||||||| |||||| ||  |||||| ||||||||    
T  30777572 ccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaattgttagttttcttaataagtgtgaattagtgtttttttgcttataaa 30777671  T
Q  257 ttaggacggagggagtaca 275  Q
    |||||||||||||||||||    
T  30777672 ttaggacggagggagtaca 30777690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 57 - 270
Target Start/End: Original strand, 43980482 - 43980695
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  43980482 catcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 43980581  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    || |||||||||||| |||| |||| |||||||  |||| ||||||| ||||  | |||||||||||||||||| |||||| || |||||| ||||||||    
T  43980582 ttcatgaaacttatttcaaggagaacacaaaaatttatacctcaaatcactaaatgttagttttcttaataagtgtgaattagtgttttttgcttataaa 43980681  T
Q  257 ttaggacggaggga 270  Q
    ||||||||||||||    
T  43980682 ttaggacggaggga 43980695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 57 - 274
Target Start/End: Complemental strand, 55937839 - 55937622
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||| ||||||  |||  |||| |||||| ||||||||| ||    
T  55937839 catcttttccaatgtaaaattaaatgcaagttgtatttaatttgttctcctttttatcttctccataatttttaaccaatgagaattatttttacatttt 55937740  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| |||||||  |||| ||||||| |||| || ||||||||||||||||||||||||| || |||||||||||||||    
T  55937739 tccatgaaacttatttcaaggagaacacaaaaacttatacctcaaatcactaagtgttagttttcttaataagtatgaattagtgttttttacttataaa 55937640  T
Q  257 ttaggacggagggagtac 274  Q
    ||||||||||||| ||||    
T  55937639 ttaggacggagggggtac 55937622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 3043303 - 3043087
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  3043303 catcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 3043204  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| || | |||||||| |||| ||||| | |||| || |||||||||||||||||| |||||| || |||||||||||||||    
T  3043203 tccatgaaacttatttcaaggagtacacaaaaaattatacctcaactcactaagtgttagttttcttaataagtgtgaattagtgttttttacttataaa 3043104  T
Q  257 ttaggacggagggagta 273  Q
    ||||||||||| |||||    
T  3043103 ttaggacggagagagta 3043087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 10591639 - 10591423
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| | ||||||  |||  |||| |||||| ||||||||||||    
T  10591639 catcttttccaatgtaaaattaaatgcaaattgcattcaattggttctcctttttattttttccataatttttaaccaatgagaattatttttacatctt 10591540  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| ||||  | |||||||||||||||||| ||||||  | |||||| ||||||||    
T  10591539 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaattactgttttttgcttataaa 10591440  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  10591439 ttaggacggagggagta 10591423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 62 - 273
Target Start/End: Complemental strand, 30012083 - 30011873
Alignment:
Q  62 tttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttat 161  Q
    |||||||||||||||||||||||||||||||| ||||||||||  |||||||||||| |||||||||||  |||| | ||||||||||||||||||  ||    
T  30012083 tttccaaagtaaaattaaatgcaaattgcattcaatttgttct--tttttattttctccataataattaaccaatgataattgtttttacatctttccat 30011986  T
Q  162 gaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatt-ttttacttataaattag 260  Q
    |||||||||||||| || || |||||||| |||| |||||||||| || |||||  ||||||||||||| |||| ||||||| |||| ||||| ||||||    
T  30011985 gaaacttattccaaaaataacacaaaaaattatacctcaaattacaatattttaactttcttaataagtgtgaaattgtatttttttgcttatgaattag 30011886  T
Q  261 gacggagggagta 273  Q
    || ||||||||||    
T  30011885 gatggagggagta 30011873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 57 - 260
Target Start/End: Original strand, 49902011 - 49902214
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  49902011 catcttttccaatataaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 49902110  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    || ||||||||||||||||  |||| | |||||| ||||  |||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  49902111 ttcatgaaacttattccaactagaacataaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 49902210  T
Q  257 ttag 260  Q
    ||||    
T  49902211 ttag 49902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 9798211 - 9797995
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||| ||||||   || ||||| |||||| ||||||||||||    
T  9798211 catcttttccaatgtaaaattaaatgcaaattggattcaatgtgttctcctttttattttctccataatttgtaatcaatgagaattatttttacatctt 9798112  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| ||||  ||||||| |||| ||||||| ||||  | |||||||||||||||| | |||||| || |||||| ||||||||    
T  9798111 tccatgaaacttatttcaaggagaacgcaaaaaattatacctcaaatcactaaatgttagttttcttaataaatgtgaattagtgttttttgcttataaa 9798012  T
Q  257 ttaggacggagggagta 273  Q
    |||||||| ||||||||    
T  9798011 ttaggacgaagggagta 9797995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 57 - 267
Target Start/End: Original strand, 47807179 - 47807388
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||  |||||| ||||||||||||    
T  47807179 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaacgagaattatttttacatctt 47807278  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||  |||| |||||||| |||| ||||||| |||| |  ||| |||||||||||||| |||||| ||  ||||| ||||||||    
T  47807279 tccatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaaggattaattttcttaataagtgtgaattagt-gtttttgcttataaa 47807377  T
Q  257 ttaggacggag 267  Q
    |||||||||||    
T  47807378 ttaggacggag 47807388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 38187862 - 38187648
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||  |||   ||| |||||| ||||||||||||    
T  38187862 catcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcttttttattttctccataatttttaacaaatgagaattatttttacatctt 38187763  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    || ||||||||||||| ||||| |    |||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||  ||||||||    
T  38187762 ttcatgaaacttattctaagaaca--caaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgtttttagcttataaa 38187665  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  38187664 ttaggacggagggagta 38187648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 51495133 - 51495348
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||  |||  |||| |||||  ||||||||||||    
T  51495133 catcttttccaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaatcatttttacatctt 51495232  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    || ||||||||||||  ||  |||| |||||||| |||| ||||||| | || || ||| |||||||||||| | |||||| || |||||| ||||||||    
T  51495233 ttcatgaaacttattataaagagaacacaaaaaattatacctcaaatcattaagtgttaattttcttaataactgtgaattagtgtttttt-cttataaa 51495331  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  51495332 ttaggacggagggagta 51495348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 57 - 237
Target Start/End: Original strand, 38940853 - 38941033
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||| ||||||||||| | || |||  ||| ||||| |||||| ||||||||||||    
T  38940853 catcttttccaatgtaaaattaaatgcaaattgcattcaatttattcttctttttattttttccaaaatttttaatcaatgagaattatttttacatctt 38940952  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt 237  Q
    || ||||||||||||||||| |||| |||||||| |||| ||||||| | || || |||||||||||||||||| ||||||    
T  38940953 ttaatgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 38941033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 57 - 237
Target Start/End: Original strand, 52713047 - 52713219
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |  ||||||||||| ||||| |         
T  52713047 catcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcctttttattttctccataattttcaaccaataagaattatttttcc----- 52713141  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt 237  Q
       ||||||||||||||||||| || |||||||| ||||  |||||| |||| || |||||||||||||||| ||||||||    
T  52713142 ---atgaaacttattccaagaaaaacacaaaaaattatacttcaaatcactaagtattagttttcttaataaatatgaatt 52713219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 1620013 - 1620230
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||  |||  |||| |||||| ||||||||| ||    
T  1620013 catctttttcaatgtaaaattaaatgcaatttgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattatttttacatatt 1620112  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgt-attttttacttataa 255  Q
    || ||||||||||||| ||| |||| ||||||||  ||| ||||||| |||| || |||  || |||||||||| |||||| ||  ||||||  ||||||    
T  1620113 ttcatgaaacttattctaaggagaacacaaaaaatgatatctcaaatcactaagtattaacttccttaataagtgtgaattagtgtttttttgtttataa 1620212  T
Q  256 attaggacggagggagta 273  Q
    ||||| || |||||||||    
T  1620213 attagaaccgagggagta 1620230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 57 - 237
Target Start/End: Complemental strand, 32012463 - 32012283
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| ||||| ||||||||||||||||||  |||||  |||  |||| |||||| ||||||||||||    
T  32012463 catctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctctataatttttaaccaatgagaattatttttacatctt 32012364  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt 237  Q
    |  |||||||||| |  ||| |||| |||||||| |||| ||||||| | || || |||||||||||||||||| ||||||    
T  32012363 tccatgaaacttaatttaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 32012283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 17799297 - 17799119
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||| | | ||||||| ||||| || ||  |||| | |||||||||||||||||    
T  17799297 catcttttccaaagtgaaactaaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatctt 17799198  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaa 235  Q
       || ||||| ||||||||||||| || | ||| ||||   |||||||  || |||||||||||||||||| ||||||    
T  17799197 cccataaaactaattccaagaagaacaccagaaattatactccaaattatcatattttagttttcttaataaatatgaa 17799119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 273
Target Start/End: Original strand, 28681723 - 28681859
Alignment:
Q  137 aagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaat 236  Q
    ||||||| |||| ||||||||  || |||||||||| ||| |||| |||||||| |||| ||||||| ||||  | |||||||||||||||||| |||||    
T  28681723 aagaattattttaacatctttccataaaacttattctaaggagaacacaaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaat 28681822  T
Q  237 ttgtattttttacttataaattaggacggagggagta 273  Q
    | ||||||||| ||||||||||||||||||| |||||    
T  28681823 tagtattttttgcttataaattaggacggagagagta 28681859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 57 - 228
Target Start/End: Complemental strand, 27750484 - 27750313
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| | ||||||  |||   | ||| |||| ||||||||||||    
T  27750484 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttattttttccataatttttaacaattaaaaattatttttacatctt 27750385  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |  ||||||||||||  || || || ||||||||  ||| ||||||| ||||  | ||| ||||||||||||    
T  27750384 tccatgaaacttattaaaaaaaaaacacaaaaaatcatatctcaaatcactaaatgttaattttcttaataa 27750313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 71 - 274
Target Start/End: Original strand, 47867882 - 47868085
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  47867882 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 47867981  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    |||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| ||||||||||||||    
T  47867982 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacggaggga 47868081  T
Q  271 gtac 274  Q
    ||||    
T  47868082 gtac 47868085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 48793773 - 48793577
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| ||||||||||  ||||  ||||||||| |||||||  | |   |||| | |||||||||||||||||   |||||||||||||    
T  48793773 aaattaaatgcaaattacatttaattttctctc--ttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattc 48793676  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||  |||| ||| ||||||||    ||||||  |||| ||||||||||||||||||| ||| |||   |||||| ||||||| ||||||||||||||||    
T  48793675 caa--agaaaacacaaaactatgctacaaattcttatgctttagttttcttaataagtgtgatttttggtttttttcttataatttaggacggagggagt 48793578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 5234124 - 5234043
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttaca 152  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||||| |||||||||||  |||||| |||||||||||||    
T  5234124 taaaattaaatgtaaattgcattcaatttattctcctttttattttctccataataattaaccaataataattgtttttaca 5234043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 42915534 - 42915735
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttc-ataataattattcaataagaattgtttttacatctttttatgaaacttatt 171  Q
    |||||||||||||||| ||||||||||  ||||  ||||||||| ||| ||||  | |   |||| | ||||||||||||||||||  ||||||||||||    
T  42915534 aaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttccatgaaacttatt 42915633  T
Q  172 ccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggag 271  Q
    ||||  | || ||||||||||||    ||||||  ||| |||||||||| ||||||||| ||  |||  ||||||| ||||||| |||||||||||||||    
T  42915634 ccaaagaaaacacaaaaaactatgctacaaattcttatattttagtttttttaataagtgtggtttttgattttttgcttataatttaggacggagggag 42915733  T
Q  272 ta 273  Q
    ||    
T  42915734 ta 42915735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 2229312 - 2229452
Alignment:
Q  133 caataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtat 232  Q
    |||||| |||||||||||||||||  ||| |||||| ||||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| |    
T  2229312 caataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 2229411  T
Q  233 gaatttgtattttttacttataaattaggacggagggagta 273  Q
    || |||   |||||| ||||||| || ||||||||||||||    
T  2229412 gatttttgtttttttgcttataatttgggacggagggagta 2229452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 37911874 - 37912088
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| ||||||||||||  ||||| || ||  |||| | |||||||||||||| ||    
T  37911874 atcttttccaaaggaaaattaaatgcaaagtgcattgaatttgctctcttttttattttctctataatcaacta-ccaatgaaaattgtttttacatatt 37911972  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    | ||| |||||||||  ||  | || ||||||||||||     ||| |||| | |||||||||||||||||||| || |||| | |||||| |||||||     
T  37911973 tctataaaacttattttaaagataacacaaaaaactatgttataaactactgtattttagttttcttaataagtgtg-attttttttttttgcttataac 37912071  T
Q  257 ttaggacggagggagta 273  Q
     | ||||||||||||||    
T  37912072 atgggacggagggagta 37912088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 58 - 228
Target Start/End: Complemental strand, 8013251 - 8013081
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    |||||||||||   |||||||||||||| ||||||| | | |||||||  ||| |||||||  || |  | ||  |||||| ||||||||||||||||||    
T  8013251 atcttttccaagtaaaaattaaatgcaatttgcattcattatgttctctctttcattttctctatgactaataaccaataaaaattgtttttacatcttt 8013152  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
     ||||||||||||| |||| | || |||| |||||||    |||| |||||||||||||||||||||||||    
T  8013151 ctatgaaacttatttcaaggataacacaagaaactatgttacaaactactatgttttagttttcttaataa 8013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 39078229 - 39078361
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    ||||||||||||||||| | || |||||| ||||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||     
T  39078229 aattgtttttacatcttct-ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattttt 39078327  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | |||||| ||||||| || ||||||||||||||    
T  39078328 tttttttttcttataatttgggacggagggagta 39078361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 224
Target Start/End: Original strand, 40553751 - 40553929
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||||||||  ||||||||||||||||||||| | |||  ||||||||| | ||||| |||||  | ||  |||| | | ||||||||    
T  40553751 aaaaaatcatcttttccaaagagaaattaaatgcaaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgttttt 40553850  T
Q  150 acatctttttatgaaacttattccaagaagaatac----aaaaaactataactcaaattactatgttttagttttctta 224  Q
    |||||||| |||||||||||||| ||| | || ||    || ||||||||   |||| |||||||||||||||||||||    
T  40553851 acatctttctatgaaacttattctaaggataacacaagaaagaaactatactgcaaactactatgttttagttttctta 40553929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 230
Target Start/End: Complemental strand, 41414759 - 41414601
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| ||||| |||||  ||| ||||| |||||||| | ||  |||||| |||||||||||||||||  ||| |||||| |    
T  41414759 taaaattaaatgcaaattacattcaattttttctctctttcatttt-ttcataatcaatagccaataaaaattgtttttacatcttcctataaaactttt 41414661  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    | |||  | || |||||||||||||   || |||  ||||||||||||||||||||||||    
T  41414660 ttcaaagaaaacacaaaaaactatactccatattcttatgttttagttttcttaataagt 41414601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 275
Target Start/End: Original strand, 14332763 - 14332964
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| |||||||  | |   |||||| |||||||||||||||||  ||| |||||| |    
T  14332763 taaaattaaatgcaaattacattcaattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcctataaaactttt 14332862  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    |||||  | || ||||||||| |||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| || | |||||||||    
T  14332863 tccaaagaaaacacaaaaaaccatattccaaattcttatgttttagttttcttaataagtgtgatttt---tttttttcttataatttggaacggaggga 14332959  T
Q  271 gtaca 275  Q
    |||||    
T  14332960 gtaca 14332964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 17236340 - 17236262
Alignment:
Q  149 tacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaata 227  Q
    ||||| ||| ||||||||||||| ||||||||| |||||||| |||| |||||| || |||||||||||||||||||||    
T  17236340 tacatttttctatgaaacttatttcaagaagaacacaaaaaattatacctcaaactattatgttttagttttcttaata 17236262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 35310822 - 35310688
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    ||||||||||||||||||  ||||||||||||| ||  | || ||||||||||||    ||||||  |||||||||||||||||||||| ||||| |||     
T  35310822 aattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgttttagttttcttaataaatatgattttt 35310723  T
Q  240 tattttttacttataaattaggacggagggagtac 274  Q
      ||||||| |||||| |||||| ||| |||||||    
T  35310722 gtttttttatttataatttaggatggatggagtac 35310688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 255
Target Start/End: Complemental strand, 38140882 - 38140677
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||||||| | |||||||||| |||||||||||| |||||||||| |   |||||   ||||| || || ||||| | ||||  ||||    
T  38140882 aaaaaatcatcttttccaaaatgaaattaaatgaaaattgcatttagtttgttctccctcacatttttgccataacaaataatcaatgaaaatttatttt 38140783  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaatttgtatttttta 248  Q
    ||| ||| | |||||||| |||  ||| |||| |||| ||||||| |||| ||||||  ||| ||||||||||||||||||| |||| |  | |||||||    
T  38140782 acaccttctgatgaaactaatttaaagtagaacacaagaaactat-actcaaaattatcatgctttagttttcttaataagtgtgaaatgatttttttta 38140684  T
Q  249 cttataa 255  Q
    |||||||    
T  38140683 cttataa 38140677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 58 - 230
Target Start/End: Complemental strand, 5064817 - 5064645
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||  |||| |||| |||||||  ||||| || || | ||| | |||||||||||||||||    
T  5064817 atctttttcaaaggaaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactact-aatgaaaattgtttttacatctt 5064719  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
      | | ||||||||| |||  | || |||||||| |||    ||||||||||||||||||||||||||||||||    
T  5064718 cctttaaaacttatttcaaagataacacaaaaaattatgttacaaattactatgttttagttttcttaataagt 5064645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 24940368 - 24940525
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||| ||||| ||||||||||  ||||  ||| ||||||| |||||  | ||  |||  | ||||||||||||||||| |||| |||||| |    
T  24940368 taaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaactttt 24940467  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |||||  | ||||||||||||||||   ||||||  || |||||||||||||||||||    
T  24940468 tccaaagaaaatacaaaaaactatactccaaattcttacgttttagttttcttaataa 24940525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 4058718 - 4058917
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  4058718 taaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctataaaactttt 4058817  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    | |||  | || |||||||||||||   ||||||  |||||||||||||||||||||| | ||| |||   |||||| ||||||| || |||||||||||    
T  4058818 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatttt---ttttttgcttataatttgggacggaggga 4058914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 32410321 - 32410490
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataa-taattattcaataagaattgtttttacatcttttt 159  Q
    |||||||||| ||||||||||||||| || ||| |||||| |||| ||||||||||||  |||| ||| ||  |||| | |||| ||||||||||||  |    
T  32410321 ttttccaaaggaaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataattaacta-gcaatgaaaattatttttacatcttcct 32410419  T
Q  160 atgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    || ||||||||| |||  | || |||||||||| ||    ||| ||||||||| |||||||||||||||||    
T  32410420 ataaaacttatttcaaagataacacaaaaaactttattataaactactatgttgtagttttcttaataagt 32410490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 10069769 - 10069877
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattcc-aagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaattt 238  Q
    |||||||||||||||||| ||| |||||| || | ||||| ||||||||||||||||   ||||||  |||||||||||||| ||||||||| ||| |||    
T  10069769 aattgtttttacatctttctataaaacttttttcgaagaa-aatacaaaaaactatactacaaattcttatgttttagttttattaataagtgtgatttt 10069867  T
Q  239 gtatttttta 248  Q
     |||||||||    
T  10069868 ttatttttta 10069877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 8683386 - 8683256
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||| ||||||||| |||  ||||||||||||||||  | || ||||||||||||    ||||||  |||| ||||||||| ||||||||| ||| |||     
T  8683386 aattatttttacatatttccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagtttttttaataagtgtgattttt 8683287  T
Q  240 tattttttacttataaattaggacggaggga 270  Q
      |||||| ||||||| ||||||||||||||    
T  8683286 gtttttttgcttataatttaggacggaggga 8683256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 20281663 - 20281753
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||||||||||  ||| |||||| ||||||  | || |||||||||||||   ||||||  ||||||||||||||||||||||||    
T  20281663 aattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 20281753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 7654689 - 7654822
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    ||||||||||| |||||  ||| |||||| ||||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||     
T  7654689 aattgtttttatatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgattttt 7654788  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
      |||||| ||||||| ||   ||||||||||||    
T  7654789 gtttttttgcttataatttgaaacggagggagta 7654822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 246
Target Start/End: Original strand, 26916390 - 26916503
Alignment:
Q  133 caataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtat 232  Q
    |||||| |||||||||||||||||  ||| |||||| || |||  | || ||||||||| |||   ||||||  |||||||||||||||||||||||| |    
T  26916390 caataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaaccatactccaaattcttatgttttagttttcttaataagtgt 26916489  T
Q  233 gaatttgtattttt 246  Q
    || ||| |||||||    
T  26916490 gattttttattttt 26916503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 28669038 - 28668949
Alignment:
Q  183 acaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||||||||||||  | |||||  |||||||||||||||||||||||| ||| ||| | | || | ||||||| ||||||||||||||||    
T  28669038 acaaaaaactatactttaaattcttatgttttagttttcttaataagtgtgattttttttcttcttcttataatttaggacggagggagt 28668949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 7652193 - 7652125
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    |||||||||| |||| ||||||||||||||||| ||||| || | |||||||||||| || ||||||||    
T  7652193 aaaaaaccatttttttcaaagtaaaattaaatgaaaatttcactcaatttgttctccattctattttct 7652125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 247
Target Start/End: Original strand, 20716183 - 20716359
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  || |  ||| ||||| | |||||  | ||  |||| | |||||||||||||||||| ||| |||||| |    
T  20716183 taaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 20716282  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
    |||||  | ||  ||||| ||||||   ||||||  |||||||||||||||||||||||| ||| ||| | ||||||    
T  20716283 tccaaacaaaagtcaaaagactatactccaaattcttatgttttagttttcttaataagtgtgattttatttttttt 20716359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 23978277 - 23978217
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| |||| |||||||    
T  23978277 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttct 23978217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 51495372 - 51495427
Alignment:
Q  217 ttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    |||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||    
T  51495372 ttttcttaataagtgtgaattaatatttttt-cttataaattaggacggagggagta 51495427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 221
Target Start/End: Complemental strand, 47516353 - 47516190
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||||| |||||||||| |||| ||||||| ||||| ||||  ||| |||||||  ||||  |  |  |||| | |||||||||||| ||||     
T  47516353 atcttttccaaaggaaaattaaatacaaagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttc 47516254  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttc 221  Q
     ||| ||||||||| |||  | || |||||||||||||   |||| |||||||||||| |||||    
T  47516253 ctataaaacttatttcaaagataacacaaaaaactatattacaaactactatgttttacttttc 47516190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 226
Target Start/End: Complemental strand, 46070682 - 46070517
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||||| ||||||||||||||| |||||| |||||  ||||  ||| |||||||  ||||  |  |  |||| | |||||||||||||||||     
T  46070682 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttactctc--tttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttc 46070585  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaat 226  Q
     ||| ||||||||| |||  | || || |||||||||    |||| |||||||||||||||||||||||    
T  46070584 ctataaaacttatttcaaagacaacac-aaaaactatgttacaaactactatgttttagttttcttaat 46070517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 55580742 - 55580875
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||||||  |||  ||||| ||||||  | || | |||||||||||   ||||||  ||||||| |||||||||||||| | ||| |||     
T  55580742 aattgtttttacatcttcctatacaactttttccaaagaaaacaaaaaaaactatactccaaattcttatgtttcagttttcttaataaatgtgactttt 55580841  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | |||| | ||||||| || ||||||||||||||    
T  55580842 ttttttcttcttataatttgggacggagggagta 55580875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 17236394 - 17236342
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgtt 102  Q
    |||||| ||| ||||| ||| ||||||||||||||||||||||| ||||||||    
T  17236394 aaaaaatcattttttctaaaataaaattaaatgcaaattgcattcaatttgtt 17236342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 28142783 - 28142724
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    ||||||||||||| |||||||||||||||  |||||||||||| |||| |||| |||||||    
T  28142783 atcttttccaaaggaaaattaaatgcaaa-agcatttaatttgctctctttttcattttct 28142724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 8178387 - 8178288
Alignment:
Q  72 aaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttatt 171  Q
    ||||||||||||||| |||||| |||||| ||||  ||| |||||||  ||||  | ||  |||||  ||||||||||||||||| |||| |||||||||    
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatt 8178288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 40411765 - 40411812
Alignment:
Q  183 acaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||||||   |||| |||||||||||||||||||||||||||    
T  40411765 acaaaaaactatattacaaactactatgttttagttttcttaataagt 40411812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 5483358 - 5483268
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||||||||||  ||| |||||||||  ||  | || |||||||| ||||  |||||||  ||||||||||||||||||| ||||    
T  5483358 aattgtttttacatcttcctattaaacttattttaaagaaaacacaaaaaattatacttcaaatttttatgttttagttttcttaacaagt 5483268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 5234035 - 5233947
Alignment:
Q  187 aaaactataactcaaattactatgttttagttttcttaataagtatgaa--tttgtattttttacttataaattaggacggagggagta 273  Q
    |||| |||| |||||||||| || |||||| ||||||||||| ||||||  | ||| |||||| ||||||||||  |||||||| ||||    
T  5234035 aaaattatacctcaaattacaatattttagctttcttaataaatatgaaattgtgttttttttgcttataaattgagacggaggaagta 5233947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 1585496 - 1585396
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||| ||||| |||| |||||  ||||  ||  ||||||| |||||| | ||  |||||| ||||||||| ||||||||  |||||||||||    
T  1585496 taaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttccatgaaacttat 1585397  T
Q  171 t 171  Q
    |    
T  1585396 t 1585396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 40411091 - 40411151
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    |||||||  |||||||||||||||| ||| |||||| |||||| |||| |||| |||||||    
T  40411091 atcttttttaaagtaaaattaaatgtaaactgcattcaatttgatctctttttcattttct 40411151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 49080250 - 49080306
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttc 117  Q
    |||| ||||| ||||||||||||||| |||||| |||||| |||| |||| ||||||    
T  49080250 tttttcaaaggaaaattaaatgcaaagtgcattcaatttgatctctttttcattttc 49080306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 1e-73; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 18036531 - 18036747
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||  |||  |||| |||||| ||||||||||||    
T  18036531 catcttttccaaagtaaaattaaatgcaaattgcattcaatttattctcctttttattttcttcataatttttaaccaatgagaattatttttacatctt 18036630  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    || |||||||||||||||||||||| |||||||| |||| ||||||| | || || |||||||||||||||||||||||||  | |||||||||||||||    
T  18036631 ttcatgaaacttattccaagaagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtatgaattaatgttttttacttataaa 18036730  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  18036731 ttaggacggagggagta 18036747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 23874000 - 23873784
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  23874000 catcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcttttttattttctccataatttttaaccaatgaaaattatttttacatctt 23873901  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  23873900 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 23873801  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  23873800 ttaggacggagggagta 23873784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 49924406 - 49924622
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||| ||  |||  |||| |||||| ||||||||||||    
T  49924406 catcttttccaatgtaaaattaaatgcaagttacatttaatttgttctcctttttattttcttcatgatttttaaccaatgagaattatttttacatctt 49924505  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| ||||||||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||||||||||||    
T  49924506 tccatgaaacttatttcaagaagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttacttataaa 49924605  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  49924606 ttaggacggagggagta 49924622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 57 - 275
Target Start/End: Complemental strand, 31970482 - 31970264
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  31970482 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 31970383  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| ||||||||  ||| ||||||| |||| || ||| | |||||||||||| |||||| ||||||||| ||||||||    
T  31970382 tccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttaatcttcttaataagtgtgaattagtattttttgcttataaa 31970283  T
Q  257 ttaggacggagggagtaca 275  Q
    |||||||||| ||||||||    
T  31970282 ttaggacggaaggagtaca 31970264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 40935786 - 40935570
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  40935786 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 40935687  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| ||||||||  ||| ||||||| |||| || |||||||||||||||| | |||||| || |||||| ||||||||    
T  40935686 tccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaa 40935587  T
Q  257 ttaggacggagggagta 273  Q
    |||||| ||||||||||    
T  40935586 ttaggatggagggagta 40935570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 62 - 273
Target Start/End: Original strand, 36383920 - 36384131
Alignment:
Q  62 tttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttat 161  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||  |||| | ||||||||||| ||||||  ||    
T  36383920 tttccaaagtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataataattagccaatgataattgtttttatatctttccat 36384019  T
Q  162 gaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattagg 261  Q
    |||| ||||||||| || || |||||||| |||| |||||||||  ||||||||  ||||||||||||| |||| ||||||||||| |||||||||| ||    
T  36384020 gaaatttattccaaaaataacacaaaaaattatatctcaaattataatgttttaactttcttaataagtgtgaaattgtattttttgcttataaattggg 36384119  T
Q  262 acggagggagta 273  Q
    ||||||||||||    
T  36384120 acggagggagta 36384131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 57 - 274
Target Start/End: Complemental strand, 28916688 - 28916472
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  28916688 catcttttccaatataaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctt 28916589  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||||||||||||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  28916588 tccatgaaacttattccaagaagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgtttttt-cttataaa 28916490  T
Q  257 ttaggacggagggagtac 274  Q
    ||||| ||||||||||||    
T  28916489 ttagggcggagggagtac 28916472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 57 - 274
Target Start/End: Original strand, 44875166 - 44875383
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  44875166 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 44875265  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||| ||| |||| |||||||  |||| ||||||| |||| || |||||||||||| ||||| |||||| || |||||| ||||||||    
T  44875266 tccatgaaacttattctaaggagaacacaaaaatttatacctcaaatcactaagtgttagttttcttagtaagtgtgaattagtgttttttgcttataaa 44875365  T
Q  257 ttaggacggagggagtac 274  Q
    ||||||||||| ||||||    
T  44875366 ttaggacggagagagtac 44875383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 29488739 - 29488951
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||| ||||||| |    
T  29488739 ttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattttttttatatcttttca 29488838  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    |||||||||||||||| |||| |||| ||| |||| ||||||| |||| || || ||||||||||||||| |||||| || ||||| |||||||||||||    
T  29488839 tgaaacttattccaaggagaacacaacaaattatacctcaaatcactaagtgttcgttttcttaataagtgtgaattagtgtttttgacttataaattag 29488938  T
Q  261 gacggagggagta 273  Q
    |||||||||||||    
T  29488939 gacggagggagta 29488951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 40220044 - 40220262
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||    
T  40220044 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 40220143  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaat---tactatgttttagttttcttaataagtatgaatttgtattttttacttata 254  Q
      ||||||||||||||||| |||| |||||||| |||| |||||||   ||||| || |||||||||||||||||| ||||||  | |||||| ||| ||    
T  40220144 ccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactactaagtgttagttttcttaataagtgtgaattactgttttttgcttgta 40220243  T
Q  255 aattaggacggagggagta 273  Q
    |||||||||||||||||||    
T  40220244 aattaggacggagggagta 40220262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 43656210 - 43655994
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||  |||| | |||| ||||||||||||    
T  43656210 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttcttcataatttttaaccaatgaaaattatttttacatctt 43656111  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||| ||| ||||    
T  43656110 tccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttttaaa 43656011  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||| ||||||    
T  43656010 ttaggacggatggagta 43655994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 46949308 - 46949524
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  46949308 catctttttcaatgtaaaattaaatgcaaattgtattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctt 46949407  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||| | |||||| || |||||| ||||||||    
T  46949408 tccatgaaacttattccaaggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaa 46949507  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  46949508 ttaggacggagggagta 46949524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 57 - 278
Target Start/End: Original strand, 25990735 - 25990956
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| | |||| ||||||||| ||    
T  25990735 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatatt 25990834  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||| | ||| ||  | |||||| ||||||||    
T  25990835 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataaatgtgatttaatgttttttgcttataaa 25990934  T
Q  257 ttaggacggagggagtacataa 278  Q
    ||||||||||||||||| ||||    
T  25990935 ttaggacggagggagtatataa 25990956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 40960647 - 40960431
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  40960647 catctttttcaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 40960548  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| ||||||||  ||  ||||||| |||| || |||||||||||||||| | |||||| || |||||| ||||||||    
T  40960547 tccatgaaacttattccaaggagaacacaaaaaatcatgcctcaaatcactaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaa 40960448  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||| ||||||    
T  40960447 ttaggacggaaggagta 40960431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 61 - 278
Target Start/End: Original strand, 18852214 - 18852431
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  |    
T  18852214 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttcccctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 18852313  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    ||||||||||| |||| |||| |||||||| |||| ||||||| ||||  | |||| ||||||||||||| |||||| || |||||| ||||||||||||    
T  18852314 tgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaactgttagctttcttaataagtgtgaattagtgttttttgcttataaattag 18852413  T
Q  261 gacggagggagtacataa 278  Q
     |||||||||||| ||||    
T  18852414 aacggagggagtatataa 18852431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 61 - 273
Target Start/End: Complemental strand, 39026415 - 39026202
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||  |||  ||||||||||| |||||||||||||  |    
T  39026415 ttttccaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaataagaattatttttacatctttcca 39026316  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgt-attttttacttataaatta 259  Q
    ||||||||||| ||||||||| |||||||| ||||  |||||| || | || |||||||||||||||| | |||||| ||  |||||| |||||||||||    
T  39026315 tgaaacttatttcaagaagaacacaaaaaattatacatcaaatcaccaagtgttagttttcttaataaatgtgaattagtgtttttttgcttataaatta 39026216  T
Q  260 ggacggagggagta 273  Q
    ||||||||||||||    
T  39026215 ggacggagggagta 39026202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 26907261 - 26907048
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||  |||  |||   ||||| |||||||||||||    
T  26907261 atctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaac--gaattatttttacatcttt 26907164  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaat 257  Q
      ||||||||||||||||| |||| |||||||| |||| ||||||| | || || |||||||||||||||||| |||||| || |||||| |||||||||    
T  26907163 ccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtattagttttcttaataagtgtgaattagtgttttttgcttataaat 26907064  T
Q  258 taggacggagggagta 273  Q
    ||||||||||||||||    
T  26907063 taggacggagggagta 26907048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 28017645 - 28017859
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  28017645 catcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgataattatttttacatctt 28017744  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| ||||  || ||||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||| ||||||||    
T  28017745 tccatgaaacttatttcaag--gagtacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaa 28017842  T
Q  257 ttaggacggagggagta 273  Q
    ||||||| |||||||||    
T  28017843 ttaggacagagggagta 28017859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 61 - 273
Target Start/End: Complemental strand, 38942610 - 38942397
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||  |||  |||| | |||| |||||||||||||  |    
T  38942610 ttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttcca 38942511  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtattttttacttataaatt 258  Q
    |||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  ||| |||||| |||||||| |    
T  38942510 tgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgt-ttttttgcttataaaat 38942412  T
Q  259 aggacggagggagta 273  Q
    || ||||||| ||||    
T  38942411 agaacggaggaagta 38942397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 18913519 - 18913301
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaata-agaattgtttttacatct 155  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||| ||  |||   |||  |||||| |||||||||||    
T  18913519 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttatgttctccatgatttttaactaattgagaattatttttacatct 18913420  T
Q  156 ttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgt-attttttacttata 254  Q
    ||| |||||||||||||| || |||| |||||||| |||| ||||||| ||||  | |||||||||||||||||| |||||| ||  |||||| ||||||    
T  18913419 tttcatgaaacttattccgaggagaacacaaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaattagtgtttttttgcttata 18913320  T
Q  255 aattaggacggagggagta 273  Q
    |||||||||||||||||||    
T  18913319 aattaggacggagggagta 18913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 9128030 - 9128246
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| ||||||||||||| |||||||||| ||||| ||  |||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  9128030 catctttttcaatgtaaaattaaatgtaaattgcattcaatttatttacctttttattttctccataatttttaaccaatgagaattatttttacatctt 9128129  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  || ||| ||||| |||| |||| |||||||| |||| ||||||| |||| || ||| |||||||||||||| ||||||  |||||||||||||||||    
T  9128130 tccattaaatttatttcaaggagaacacaaaaaagtatacctcaaatcactaagtgttaattttcttaataagtgtgaattaatattttttacttataaa 9128229  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||| ||||||    
T  9128230 ttaggacggatggagta 9128246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 57 - 270
Target Start/End: Complemental strand, 45358049 - 45357835
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||  |||  |||| |||||| ||||||||| ||    
T  45358049 catcttttccaatgtaaaattaaatacatgttgcatttaatttgttcacctttttattttctccataatttttaaccaatgagaattatttttacatatt 45357950  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtattttttacttata 254  Q
    |  |||||||||||||||| | ||| |||||||| |||| ||||||| |||| || |||||| ||||||||||| ||||||  ||| |||||| ||||||    
T  45357949 tccatgaaacttattccaa-aggaacacaaaaaattatacctcaaatcactaagtgttagttgtcttaataagtgtgaattaatgttttttttgcttata 45357851  T
Q  255 aattaggacggaggga 270  Q
    ||||||||||||||||    
T  45357850 aattaggacggaggga 45357835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 57 - 268
Target Start/End: Original strand, 35941828 - 35942039
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||| ||||||||||| ||||||||||| |||||||||||| ||||||  ||| ||||| | |||| || |||||||||    
T  35941828 catctttttcaatgtaaaattaaatacaaattgcattcaatttgttctcttttttattttctccataatttttaatcaatgaaaattattattacatctt 35941927  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  || ||||||||| |||| |||  |||||||| |||| ||||||| | || || |||||||||||||||||| |||||| || |||||| ||||||||    
T  35941928 tccataaaacttatttcaaggagagcacaaaaaattatacctcaaataattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 35942027  T
Q  257 ttaggacggagg 268  Q
    ||||||||||||    
T  35942028 ttaggacggagg 35942039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 15285791 - 15286005
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||||| ||||| |||||| ||||||  |||  |||| |||||| ||||||||| ||    
T  15285791 catctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctctttttt-ttttctccataatttttaaccaatgagaattatttttacatatt 15285889  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| |||||||| ||||  |||||| |||| || |||||||||||||||||| ||||||  | |||||| ||||||||    
T  15285890 tccatgaaacttatttcaaggagaacacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaattaatgtttttt-cttataaa 15285988  T
Q  257 ttaggacggagggagta 273  Q
    |||| ||||| ||||||    
T  15285989 ttagaacggatggagta 15286005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 15311165 - 15311380
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||  ||| ||| ||||||||||||||||||||||||  |||||  |||  |||| |||||| ||||||  ||||    
T  15311165 catctttttcaatgtaaaattaaatgcag-ttgtattcaatttgttctcctttttattttctctataatttttaaccaatgagaattatttttatttctt 15311263  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| ||||||||||||| |||| ||||||| | || || |||||||||||||||||| |||||| || |||| | ||||||||    
T  15311264 tccatgaaacttattccaaggagaatacaaaaaattatacctcaaatcattaagtattagttttcttaataagtgtgaattagtgttttatgcttataaa 15311363  T
Q  257 ttaggacggagggagta 273  Q
    ||| |||||||| ||||    
T  15311364 ttatgacggaggaagta 15311380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 58 - 268
Target Start/End: Original strand, 35189189 - 35189400
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||| ||| |||||||||| | ||||||||||| ||| ||||||||| |||||||||| ||||||  |||  |||| | |||| ||||||||| |||    
T  35189189 atctttttcaatgtaaaattaactacaaattgcattcaatgtgttctcctctttattttctccataatttttaaccaatgaaaattatttttacatattt 35189288  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttag-ttttcttaataagtatgaatttgtattttttacttataaa 256  Q
      |||||||||||| ||||||||| | |||||| |||| |||||||||||| || |||| |||||||||||| | |||||| || |||||| ||||||||    
T  35189289 ccatgaaacttatttcaagaagaacataaaaaattatacctcaaattactaagtgttagtttttcttaataaatgtgaattagtgttttttgcttataaa 35189388  T
Q  257 ttaggacggagg 268  Q
    ||||||||||||    
T  35189389 ttaggacggagg 35189400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 6848479 - 6848267
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||  ||||||||||||||||||||||| |||  ||| ||||||||||||||| ||||||  |||  |||| |||||| ||||||   |||    
T  6848479 catcttttccaatctaaaattaaatgcaaattgcattcaatgcgttatcctttttattttctccataatttttaaccaatgagaattattttta---ctt 6848383  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| ||||||||  ||| ||||||| ||||  | |||||||| ||||||| | |||||| || |||||| ||||||||    
T  6848382 tccatgaaacttatttcaaggagaacacaaaaaatcatacctcaaatcactaattattagtttt-ttaataaatgtgaattagtgtttttttcttataaa 6848284  T
Q  257 ttaggacggagggagta 273  Q
    |||||| ||||||||||    
T  6848283 ttaggatggagggagta 6848267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 235
Target Start/End: Original strand, 42724079 - 42724263
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||| ||||| | | ||||||||||||| || ||   ||||| ||||||||||    
T  42724079 aaaaaatcatcttttc-aaagtgaaattaaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattgttttt 42724177  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaa 235  Q
    ||||||| |  ||||||| ||| ||||||||| | || ||||||||  |||||| |  ||||||||||||||||| ||||| ||||    
T  42724178 acatcttctcgtgaaactaatttcaagaagaacagaagaaactatacttcaaatgataatgttttagttttcttagtaagtgtgaa 42724263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 26479726 - 26479943
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||| |||| |||||||||| ||| ||||||||||||||||||||  ||| |  |||  |||| |||||| ||||||||| ||    
T  26479726 catcttttccaatgtaaaattcaatgaaaattgcattcaatatgttctcctttttattttctctatagtttttaaccaatgagaattatttttacatttt 26479825  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaat--ttgtattttttacttata 254  Q
    |  || |||||||||  ||| |||| |||||||| |||| ||||||| ||||  | |||||||| ||||||||| |||||  |||| |||||| ||||||    
T  26479826 tccataaaacttattttaaggagaacacaaaaaattatacctcaaatcactaaatgttagtttttttaataagtgtgaattattgt-ttttttgcttata 26479924  T
Q  255 aattaggacggagggagta 273  Q
    |||||| ||||||| ||||    
T  26479925 aattagaacggaggaagta 26479943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 57 - 256
Target Start/End: Original strand, 47996941 - 47997140
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||  |||   ||| |||||| |||||| |||||    
T  47996941 catcttttccaatgtaaaattaaatacaaattgtattcaatttgttctcctttttattttctccataatttttaactaatgagaattatttttatatctt 47997040  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |  ||||||| | |||||| || ||||||||  ||| ||||||| ||||  | |||||||||||||||||| ||||||  | |||||| ||||||||    
T  47997041 tccaaaaaacttacttcaagaaaaacacaaaaaataatacctcaaatcactaaatgttagttttcttaataagtgtgaattactgttttttgcttataaa 47997140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 4529178 - 4529378
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||| ||||||  |||    || |||||| |||||||||||||  |    
T  4529178 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttgttttctccataatttttaacagatgagaattatttttacatctttcca 4529277  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    |||||||||||||||| ||||            || ||||||| |||| || ||||||||||||||||||||||||| || |||||| ||||||||||||    
T  4529278 tgaaacttattccaaggagaa-----------ctacctcaaatcactaagtgttagttttcttaataagtatgaattagtgtttttt-cttataaattag 4529365  T
Q  261 gacggagggagta 273  Q
     ||||| ||||||    
T  4529366 aacggatggagta 4529378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 188 - 273
Target Start/End: Original strand, 36037355 - 36037440
Alignment:
Q  188 aaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||    
T  36037355 aaactataactcaaattaccatgttttagttttcttaataagtgtgaatttgtgttttttgcttataaattgggacggagggagta 36037440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 35884212 - 35884369
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||  |||||  |||  |||| | |||| |||||||||||||  || ||| ||||    
T  35884212 taaaattaaatgcaaattgcattaaatgtgttcttctttttattttctctataatttttaaccaatgaaaattatttttacatctttccataaaatttat 35884311  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    | ||| ||||| |||||||| |||| |||||||||||| |  ||||||||||||||||    
T  35884312 ttcaaaaagaacacaaaaaattatacctcaaattactaagagttagttttcttaataa 35884369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 41063733 - 41063951
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||||||||  ||| |||||||  |||| || ||  |||| | |||| |||||||||||||    
T  41063733 atctttttcaaagaaaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatcttt 41063832  T
Q  158 ttatgaaa-cttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga--atttgtattttttacttata 254  Q
     ||| ||| ||||||  ||||| || ||||||||||||    |||| ||||||||||| ||||||||||||||| |||   ||| | |||||| ||||||    
T  41063833 ctataaaagcttattttaagaataacacaaaaaactatgttgcaaactactatgttttggttttcttaataagtgtgatttttttttttttttgcttata 41063932  T
Q  255 aattaggacggagggagta 273  Q
    |  | ||||||||||||||    
T  41063933 atatgggacggagggagta 41063951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 273
Target Start/End: Complemental strand, 44510386 - 44510174
Alignment:
Q  60 cttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctttt 158  Q
    ||||||||||| ||||||||||||||| |||||| |||||| ||||||||| |||||||  ||||| |||||| |||| | ||||||||||||| |||      
T  44510386 cttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattat-caatgaaaattgtttttacaacttcc 44510288  T
Q  159 tatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaatt 258  Q
    ||| ||| ||||| ||| || || ||||||||||||     ||| |||||| ||||||||||||||| |||| || |||| | |||||| |||||||  |    
T  44510287 tataaaatttatttcaaaaataacacaaaaaactatgttataaactactatattttagttttcttaagaagtgtg-atttttttttttttcttataatat 44510189  T
Q  259 aggacggagggagta 273  Q
     ||||||| ||||||    
T  44510188 gggacggatggagta 44510174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 24728781 - 24728580
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| ||||||||||  ||||  ||||||||| | |||||| | |   |||| | |||||||||||||||||   |||||||||||||    
T  24728781 aaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccatgaaacttattc 24728682  T
Q  173 caagaagaatacaaaaaa-ctataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggag 271  Q
     ||  | || |||||||| ||||    ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| |||||||||||||||    
T  24728681 gaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacggagggag 24728582  T
Q  272 ta 273  Q
    ||    
T  24728581 ta 24728580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 247
Target Start/End: Complemental strand, 25185473 - 25185283
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||| |||| |||||||  ||||| || ||  |||| | | ||||||| |||||||    
T  25185473 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaacta-ccaatgaaagttgttttcacatctt 25185375  T
Q  157 tttatgaaacttattccaagaagaatac-aaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
      ||| ||||||||| |||  | || || ||||||||||    |||| ||||||||||||||||||||||||||||||| ||| | ||||||    
T  25185374 cctataaaacttatttcaaagataacacaaaaaaactatgttacaaactactatgttttagttttcttaataagtatgattttttttttttt 25185283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 235
Target Start/End: Original strand, 7190651 - 7190825
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||| | | |||||||  |||| || ||   ||||  |||| |||||||||||||| |    
T  7190651 ttttccaaagtgaaattaaatgcaaattgcctttaatttgctctccctctcattttctctataacaaataactaatataaattatttttacatcttttca 7190750  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaa 235  Q
    |  |||| ||| |||| |||| |||| ||||||| |||| ||||||  ||||||||||||| ||||||||| ||||    
T  7190751 ttgaactaatttcaaggagaacacaagaaactat-actctaaattatcatgttttagtttttttaataagtgtgaa 7190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 15912182 - 15912308
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||| |||||||||| ||||||||||||||| |||||| |||||| ||||||||| |||||||   |||| |  | ||||| | ||||||||||    
T  15912182 aaaaaatcattttttccaaagaaaaattaaatgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgttttt 15912281  T
Q  150 acatctttttatgaaacttattccaag 176  Q
    |||||||  ||| ||||||||| ||||    
T  15912282 acatcttcctataaaacttatttcaag 15912308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 46803758 - 46803668
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||||||||||| ||||||||||||| |||| | || ||||||||||||    |||| ||||||||||| |||||||||||||||    
T  46803758 aattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaactatgttgcaaactactatgttttggttttcttaataagt 46803668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 24190543 - 24190675
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    ||||||||||||||||   ||| |||||| ||||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| || ||||     
T  24190543 aattgtttttacatctccgtataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtg-atttt 24190641  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | |||||| ||||||| || ||||||||||||||    
T  24190642 tgtttttttcttataatttgggacggagggagta 24190675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 32983258 - 32983127
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    ||||||||||||||||| |||| |||||| | | ||||| || |||||||||||||  || ||||  |||||||||||||||||||||||| || ||||     
T  32983258 aattgtttttacatcttcttataaaacttttccaaagaa-aacacaaaaaactatacttccaatttttatgttttagttttcttaataagtgtg-atttt 32983161  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | |||| | ||||||| |||||| ||||||||||    
T  32983160 ttttttcttcttataatttaggatggagggagta 32983127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 44056478 - 44056377
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    ||||| ||||||||| || ||||||||||||||||| |||||||  ||||  ||||||| ||||||||| |||||| ||||  |||| ||||||||||||    
T  44056478 aaaaacccatctttttcagagtaaaattaaatgcaatttgcattccattttctctccttcttattttctccataatcattaaccaatgagaattgttttt 44056379  T
Q  150 ac 151  Q
    ||    
T  44056378 ac 44056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 44148923 - 44148790
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||||||   ||||||||||||||||  | || ||||||||||||    ||||||  |||| |||||||||| |||||||| ||| |||     
T  44148923 aattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcgtaataagtgtgattttt 44148824  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
      |||||| ||||||| |||||||||||||||||    
T  44148823 gtttttttgcttataatttaggacggagggagta 44148790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 3861849 - 3861699
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    ||||||||||||||||||  ||||||||| |||||||||  ||||| |||||||| | ||  |||| | ||||||||||||||||||  || ||||||||    
T  3861849 taaaattaaatgcaaattatatttaattt-ttctcctttc-atttttttcataatcaatagccaatgaaaattgtttttacatctttcaataaaacttat 3861752  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttctt 223  Q
    || ||  | || | |||||| ||||  |||||||| |||||||||||||||||    
T  3861751 tctaaagaaaacataaaaaattatacttcaaattattatgttttagttttctt 3861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 255
Target Start/End: Original strand, 5950431 - 5950628
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||| ||||  ||| ||||| |  ||||  | |   |||| | |||||||||||||||||     
T  5950431 atcttttccaaaggaaaattaaatgtaaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttc 5950530  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattac---tatgttttagttttcttaataagtatgaatttgtattttttacttata 254  Q
     ||| ||||||||| |||| | || |||| |||||||    |||| |||   |||||||||||||||||||||||| |||||||   |||||||||||||    
T  5950531 ctataaaacttatttcaaggataacacaagaaactatgttgcaaactacgagtatgttttagttttcttaataagtgtgaattt---ttttttacttata 5950627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 15959796 - 15959596
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  15959796 taaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 15959697  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    | |||  | || |||||||| ||||   ||||||  |||||||||||||||||||||| | |||  || | |||||||||||||| || |||||||||||    
T  15959696 ttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataaatgtga--tttttttttttacttataatttgggacggaggga 15959599  T
Q  271 gta 273  Q
    |||    
T  15959598 gta 15959596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 7397698 - 7397879
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||  |||| |||||||  ||||| || ||  |||| | |||||||||||||||||    
T  7397698 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaata-ccaatgaaaattgtttttacatctt 7397796  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
      ||| ||| ||||| |||  | || ||||||||||||    |||| |||||| |||||||||| ||||||||| ||| ||||    
T  7397797 cctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatattttagtttttttaataagtgtgattttg 7397879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 37735537 - 37735415
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| |||| |||||  |||| |||  ||||||| |||||| | ||  |||||| |||||||||||| ||||   |||||||||||||    
T  37735537 aaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccatgaaacttattc 37735438  T
Q  173 caagaagaatacaaaaaactata 195  Q
    |||  | ||||||||||||||||    
T  37735437 caaagaaaatacaaaaaactata 37735415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 247
Target Start/End: Original strand, 45226143 - 45226319
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  | ||  ||| ||||| | |||||  | || ||||| | |||||||||||| ||||  ||| |||||| |    
T  45226143 taaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctataaaactttt 45226242  T
Q  171 tccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
    | |||  | |||||| ||||||||| ||| |||||| |||||||||||||||||||||||| ||| ||| ||||||||    
T  45226243 ttcaaagaaaatacataaaactata-ctctaaattattatgttttagttttcttaataagtgtgattttttatttttt 45226319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 39932728 - 39932576
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    ||||||||||| |||||| |||| |||||  ||||  ||||||||||| ||| |  | ||  |||||| ||||||||||| ||||| |||| ||||||||    
T  39932728 taaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttcttataaaacttat 39932629  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttctt 223  Q
    |  || || || |||||||||||||   ||||||  |||||||||||||||||    
T  39932628 taaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttctt 39932576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 50176589 - 50176728
Alignment:
Q  133 caataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtat 232  Q
    |||||| |||||||||||||||||  ||| ||| ||||| |||  | || ||||||||||||    |||| ||||||||||||||||||||||||| | |    
T  50176589 caataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataaatgt 50176688  T
Q  233 gaatttgtattttttacttataaattaggacggagggagta 273  Q
    || ||| | ||||||| ||||||  | ||||||||||||||    
T  50176689 gattttttttttttta-ttataatatgggacggagggagta 50176728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 274
Target Start/End: Original strand, 37538883 - 37539017
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||| ||||||||||  ||| ||||||||| |||| | || |||| |||||||    |||| |||||| ||||| |||||||||||||| ||| |||     
T  37538883 aattgtctttacatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaactactatattttaattttcttaataagtgtgattttt 37538982  T
Q  240 tattttttacttataaattaggacggagggagtac 274  Q
    | |||||| |||||||  | |||||||||||||||    
T  37538983 ttttttttgcttataatatgggacggagggagtac 37539017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 3875111 - 3874974
Alignment:
Q  133 caataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtat 232  Q
    |||||| |||||||||||||| ||  ||| |||||| ||| || || || ||||||  |||||  |||||||  ||||||||| |||||||||||||| |    
T  3875111 caataaaaattgtttttacatattcctataaaactttttcaaaaaaaaacacaaaa--ctatacttcaaattcttatgttttacttttcttaataagtgt 3875014  T
Q  233 gaatttgtattttttacttataaattaggacggagggagta 273  Q
    | |||| | |||||  ||||||| |||||||||||||||||    
T  3875013 g-atttttttttttggcttataatttaggacggagggagta 3874974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 28016900 - 28016701
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaac-tta 169  Q
    ||||||||||||||| || |||| |||||  ||||  ||||||||| || ||||  | ||  |||| | |||||||||||||||||  ||| |||| ||     
T  28016900 taaaattaaatgcaagttacattcaattttctctc--ttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctataaaacattt 28016803  T
Q  170 ttccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagg 268  Q
    ||| ||||| || || |||||||||| ||| |||||  |||||||||||||||||||||||| || |||| |||||||| ||||||| || ||||||| |    
T  28016802 ttcaaagaa-aacaccaaaaactata-ctctaaattcttatgttttagttttcttaataagtgtg-atttttattttttgcttataatttgggacggaag 28016706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 2126112 - 2126200
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |||||||||||||||||  ||| |||||| ||||||  | || |||||||||||||   ||||||  ||||||||||||||||||||||    
T  2126112 aattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatattccaaattcttatgttttagttttcttaataa 2126200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 6785461 - 6785619
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||| | |||| |||||  ||||  ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  6785461 taaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcatataaaactttt 6785560  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    || ||  | || ||||||||||||| ||| ||||  ||||||||||||||||||||||||    
T  6785561 tcaaaagaaaacacaaaaaactata-ctccaattcttatgttttagttttcttaataagt 6785619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 42965970 - 42965809
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| ||| || |    
T  42965970 taaaattaaatgcaaattacattcaattttctctctctttcatttt-tccataaccaatagccaatgaaaattgtttttacatcttcctataaaattttt 42965872  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga 234  Q
     | ||||| || ||||||||||| |  |||||||  ||||||||||||||||||||||||||||    
T  42965871 ccaaagaa-aacacaaaaaactaaacttcaaatttttatgttttagttttcttaataagtatga 42965809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 35366290 - 35366200
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||||||||||| ||| ||| ||||| |||  | || |||| |||||||    |||| |||||||||||||||||||||||||||    
T  35366290 aattgtttttacatctttctataaaatttatttcaacgataacacaagaaactatgttgcaaactactatgttttagttttcttaataagt 35366200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 51339075 - 51338953
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctc-ctttttattttcttcataataattattcaataagaattgtttt 148  Q
    |||||| ||||||||||||||  ||||||||||||| ||||||||| | |||| || ||||  |||||||  ||||  | ||  |||| | ||||| |||    
T  51339075 aaaaaatcatcttttccaaagagaaattaaatgcaatttgcatttactatgttttctctttcaattttctctataactaataaccaatgaaaattgattt 51338976  T
Q  149 tacatctttttatgaaacttatt 171  Q
    ||||||||| |||||||||||||    
T  51338975 tacatctttctatgaaacttatt 51338953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 51840673 - 51840547
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctc-ctttttattttcttcataataattattcaataagaattgtttt 148  Q
    |||||| ||||||||||||||  ||||||||||||| ||||||||| | |||| || ||||  |||||||  ||||  | ||  |||| | ||||| |||    
T  51840673 aaaaaatcatcttttccaaagagaaattaaatgcaatttgcatttactatgttttctctttcaattttctctataactaataaccaatgaaaattgattt 51840574  T
Q  149 tacatctttttatgaaacttattccaa 175  Q
    || |||||| |||||||||||||||||    
T  51840573 tatatctttctatgaaacttattccaa 51840547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 52985007 - 52985097
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||||||||||    |||||||||||||||  | || |||||||||||||   ||||||  ||||| ||||||||||||||||||    
T  52985007 aattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaattcttatgtattagttttcttaataagt 52985097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 11241101 - 11241233
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    ||||| |||||||||||  ||| |||||| ||||||  | || |||||||||||||   ||||||  ||||||||| |||| ||||||||| || ||||     
T  11241101 aattggttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttaatttttttaataagtgtg-atttt 11241199  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | |||||| ||||||| |||| ||||| ||||||    
T  11241200 ttttttttgcttataatttagaacggatggagta 11241233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 266
Target Start/End: Complemental strand, 32624161 - 32623969
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||  | |   |||| | |||||||||||||||||  ||| |||||| |    
T  32624161 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 32624062  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacgga 266  Q
    | |||  | || ||||||||||| |   ||||||  |||||||||||||||||||||| | ||| |||   |||||| ||||||| ||||||||||    
T  32624061 ttcaaagaaaacacaaaaaactacactccaaattcttatgttttagttttcttaataattgtgatttt---ttttttgcttataatttaggacgga 32623969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 5858540 - 5858404
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||| ||||  ||| |||||||  ||||  | ||  |||| | ||||||||||| |||||     
T  5858540 atctttttcaaaggaaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttc 5858441  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactat 194  Q
     ||| ||||||||| |||| | || |||| |||||||    
T  5858440 ctataaaacttatttcaaggataacacaagaaactat 5858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 33369558 - 33369714
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||  | ||  |||| | ||||||||||||||||  | || |||||| |    
T  33369558 taaaattaaatgcaaattacattcaattttctctc--tttcattttttccataaccaatagccaatgaaaattgtttttacatctcat-ataaaactttt 33369654  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||  | || |||||||||||||   ||||||  ||||||||||||||||||||||||    
T  33369655 tccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagt 33369714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 52841532 - 52841444
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    ||||||||| |||||||| |||||||||||||  ||| | || |||| ||||||||   |||| || | ||||||||||||||||||||    
T  52841532 aattgttttaacatctttctatgaaacttattttaaggataagacaagaaactatactacaaactattgtgttttagttttcttaataa 52841444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 13351677 - 13351732
Alignment:
Q  63 ttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    |||| ||| |||| |||||||||| |||||| |||||||||||||||| |||||||    
T  13351677 ttccgaaggaaaactaaatgcaaagtgcattcaatttgttctccttttcattttct 13351732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 230
Target Start/End: Complemental strand, 39555742 - 39555583
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| ||| |  ||||  ||| ||||| | |||||  | ||  |||| | |||||||||||||||||| ||| |||||| |    
T  39555742 taaaattaaatgcaaattacattcaatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 39555643  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    | |||  | || ||||||| |||||   ||||||  ||||||||| ||||||||||||||    
T  39555642 ttcaaagaaaacacaaaaacctatactccaaattcttatgttttaattttcttaataagt 39555583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 6786912 - 6787002
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||| ||||||||||  ||| |||||| ||||||  | || |||||||||||||   ||||||   |||||||||||||||||||||||    
T  6786912 aattgtgtttacatcttcatataaaactttttccaaagaaaacacaaaaaactatactccaaattctcatgttttagttttcttaataagt 6787002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 255
Target Start/End: Complemental strand, 7876091 - 7875912
Alignment:
Q  78 aaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaactta---ttcca 174  Q
    ||||||||||| |||| |||||  ||||  ||||||||| | |||||  | || ||||||| |||| ||||||||||||| ||| |||   |   ||| |    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaaaaaaaaattcaa 7875992  T
Q  175 agaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataa 255  Q
    |||| || |||||||||||||| |||||||  ||| ||||| |||||||||||||| ||| ||| |  ||||| |||||||    
T  7875991 agaa-aacacaaaaaactataattcaaatttttatattttaattttcttaataagtgtgattttattatttttgcttataa 7875912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 13291863 - 13291949
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaat 226  Q
    ||||||| || ||||||| |||||||||||||||||| | || |||| |||| |||   |||| |||| | ||||||||||||||||    
T  13291863 aattgttcttgcatctttctatgaaacttattccaaggataacacaagaaacaatattacaaactactgtattttagttttcttaat 13291949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 39150880 - 39150811
Alignment:
Q  202 attactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagtac 274  Q
    ||||||||||||| ||||||||||||||| ||| |||   |||||| |||||||  | |||||||||||||||    
T  39150880 attactatgttttggttttcttaataagtgtgatttt---ttttttgcttataatattggacggagggagtac 39150811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 16854145 - 16854226
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttaca 152  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||||| |||||  | ||  |||||| |||||||||||||    
T  16854145 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttaca 16854226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 16688210 - 16688339
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||||||  ||| ||||||||| ||| || || | ||||||||||    |||| |||||||||||| ||||  |||||||| ||| ||      
T  16688210 aattgtttttacatcttcctataaaacttatttcaaaaataacataaaaaactatgttacaaactactatgttttaatttttctaataagtgtgattt-- 16688307  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
      |||||| |||||||  | ||||||||||||||    
T  16688308 --ttttttccttataatatgggacggagggagta 16688339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 99
Target Start/End: Original strand, 46542989 - 46543017
Alignment:
Q  71 taaaattaaatgcaaattgcatttaattt 99  Q
    |||||||||||||||||||||||||||||    
T  46542989 taaaattaaatgcaaattgcatttaattt 46543017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 4e-67; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 57 - 274
Target Start/End: Complemental strand, 792525 - 792308
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  792525 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 792426  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  792425 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 792326  T
Q  257 ttaggacggagggagtac 274  Q
    ||||||||||||||||||    
T  792325 ttaggacggagggagtac 792308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 14565542 - 14565326
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  14565542 catcttttccaatgtaaaattaaatgcaaattgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 14565443  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||| ||||||||    
T  14565442 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaa 14565343  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  14565342 ttaggacggagggagta 14565326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 62 - 273
Target Start/End: Complemental strand, 18834074 - 18833862
Alignment:
Q  62 tttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttat 161  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||  |||| | ||||||||||||||||||  ||    
T  18834074 tttctaaagtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataataattaaccaatgataattgtttttacatctttccat 18833975  T
Q  162 gaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatt-ttttacttataaattag 260  Q
    ||||||||||||||||| || |||||||| |||| |||||||||| || |||||| ||||||||||||| |||| ||||||| |||| ||||||||||||    
T  18833974 gaaacttattccaagaataacacaaaaaattatacctcaaattacaatattttagctttcttaataagtgtgaaattgtatttttttgcttataaattag 18833875  T
Q  261 gacggagggagta 273  Q
    |||||||||||||    
T  18833874 gacggagggagta 18833862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 21539744 - 21539960
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  21539744 catcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatttttacatctt 21539843  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  21539844 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 21539943  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  21539944 ttaggacggagggagta 21539960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 33635323 - 33635539
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  33635323 catcttttctaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 33635422  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||| |||||||||||| || |||||||| |||| ||||||| ||||  | |||||||||||||||||| |||||| || |||||| ||||||||    
T  33635423 tccatgaaatttattccaagaaaaacacaaaaaattatatctcaaatcactaaatattagttttcttaataagtgtgaattagtgttttttgcttataaa 33635522  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  33635523 ttaggacggagggagta 33635539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 8784382 - 8784599
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  ||| |||||||||||| ||||||||||||    
T  8784382 catctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaatcaataagaattatttttacatctt 8784481  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtattttttacttata 254  Q
    |  |||||||||||| ||||||||| |||||||| |||| ||||||| |||| || |||||||||||||||||||||||||  ||| |||||| ||||||    
T  8784482 tccatgaaacttatttcaagaagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtatgaattaatgt-ttttttgcttata 8784580  T
Q  255 aattaggacggagggagta 273  Q
    |||||  ||||||||||||    
T  8784581 aattaaaacggagggagta 8784599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 10478166 - 10478381
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||    
T  10478166 atcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 10478265  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaat 257  Q
      |||||||||||| |||| |||| |||||||| |||| ||||| | |||| || |||||||||||||||||| ||||||  | |||||| |||||||||    
T  10478266 ccatgaaacttatttcaaggagaacacaaaaaattatatctcaactcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaat 10478365  T
Q  258 taggacggagggagta 273  Q
    ||||||||||||||||    
T  10478366 taggacggagggagta 10478381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 58 - 264
Target Start/End: Complemental strand, 13822938 - 13822729
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||| ||| |||||| ||||  |||||||||| ||||||||||||||    
T  13822938 atctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcatttctattctctccataatcattaaccaataagaatggtttttacatcttt 13822839  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattac---tatgttttagttttcttaataagtatgaatttgtattttttacttata 254  Q
    | ||||||||||||| |||||||| |||||||| |||| |||||| |||   |||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  13822838 tcatgaaacttattctaagaagaacacaaaaaattatacctcaaaatactagtatgtttttgttttcttaataagtgtgaatttgtattttttgcttata 13822739  T
Q  255 aattaggacg 264  Q
    |||| |||||    
T  13822738 aattgggacg 13822729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 57 - 271
Target Start/End: Complemental strand, 5091709 - 5091495
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  5091709 catctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 5091610  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    || ||||||||||||  | |||||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| ||||||||| ||||||||    
T  5091609 ttcatgaaacttattttaggaagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaa 5091510  T
Q  257 ttaggacggagggag 271  Q
    |||  ||||||||||    
T  5091509 ttaaaacggagggag 5091495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 52 - 273
Target Start/End: Original strand, 15068717 - 15068939
Alignment:
Q  52 aaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttac 151  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||||| ||||  ||||||||||||||| |||    
T  15068717 aaaatcatcttttccaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaattgtttatac 15068816  T
Q  152 atctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgt-attttttact 250  Q
    |||||| ||||||| ||||||||||||||| ||||||||  ||| |||||| |||| |||||| ||||||||||||||| ||| ||| |  |||||| ||    
T  15068817 atctttctatgaaatttattccaagaagaacacaaaaaatcatacctcaaactactctgtttttgttttcttaataagtgtgattttatgtttttttgct 15068916  T
Q  251 tataaattaggacggagggagta 273  Q
    |||||||| |||||||| |||||    
T  15068917 tataaattgggacggagtgagta 15068939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 38549812 - 38549596
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||| ||||| |||||| ||||||  |||  |||| |||||| ||||||||||||    
T  38549812 catcttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattatttttacatctt 38549713  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| ||||||||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  38549712 tccatgaaacttattccaaggagaatacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 38549613  T
Q  257 ttaggacggagggagta 273  Q
    |||| || |||||||||    
T  38549612 ttagaacagagggagta 38549596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 43451492 - 43451708
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  43451492 catctttttcaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgaaaattatttttacatctt 43451591  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||| ||| |||| ||||||||  ||| ||||||| ||||  | ||||||||||||||||||||||||| ||||||||| ||||||||    
T  43451592 tccatgaaacttattctaaggagaacacaaaaaatcatacctcaaatcactaaatgttagttttcttaataagtatgaattagtattttttgcttataaa 43451691  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  43451692 ttaggacggagggagta 43451708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 29514644 - 29514428
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||| |||| ||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  29514644 catctttcccaatgtaaaattaaatgtaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgaaaattatttttacatctt 29514545  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    || ||||||||||||| ||| | || |||||||| |||| |||||||||||| || |||||||| ||||||||||||||||  | |||||| ||||||||    
T  29514544 ttcatgaaacttattctaaggataacacaaaaaattatacctcaaattactaagtgttagtttttttaataagtatgaattactgttttttgcttataaa 29514445  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  29514444 ttaggacggagggagta 29514428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 35832399 - 35832615
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||  ||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||  |||   ||| |||||| ||||||||||||    
T  35832399 catcttttccaatataaaattaaatgcaaattgcattcaatctgttcacctttttattttctccataatttttaactaatgagaattatttttacatctt 35832498  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||| |||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  35832499 tccatgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 35832598  T
Q  257 ttaggacggagggagta 273  Q
    |||||| ||||||||||    
T  35832599 ttaggatggagggagta 35832615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 4091998 - 4092214
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||| ||||||| ||||||||||||||||| |||| | ||||||  |||  || | |||||| ||||||||||||    
T  4091998 catctttttcaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttttccataatttttaaccattgagaattatttttacatctt 4092097  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||| | || |||||| ||||||||    
T  4092098 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaagtagtgttttttgcttataaa 4092197  T
Q  257 ttaggacggagggagta 273  Q
    |||| ||||||||||||    
T  4092198 ttagaacggagggagta 4092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 43075737 - 43075952
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||| |||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  43075737 catctattccaatgtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaatgaaaattatttttacatctt 43075836  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| |  ||||| || | ||||||| |||| || |||||||||||||||||| |||||| ||||||||| ||||||||    
T  43075837 tccatgaaacttatttcaaggagaaca-taaaaattacacctcaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaa 43075935  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  43075936 ttaggacggagggagta 43075952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 44803885 - 44804101
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  44803885 catcttttccaatgtaaaattaaatacaaattgcattcaatttgttctcctatttattttctccataatttttaaccaatgagaattatttttacatctt 44803984  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  || |||||||||||||| |||| |||||||| |||| ||||||| |||| || ||| |||||||||||||| ||||||  | || ||| ||||||||    
T  44803985 tccattaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaattaatgttgtttgcttataaa 44804084  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||| ||||    
T  44804085 ttaggacggaggaagta 44804101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 9294636 - 9294864
Alignment:
Q  51 aaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttta 150  Q
    ||||| |||||||| |||||||||||||||||||||||||||| |||||||||| || | |||| ||| |||||| ||||  ||||||||||||||||||    
T  9294636 aaaaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttcttctctctattctctccataatcattaaccaataagaattgttttta 9294735  T
Q  151 catctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtatttttta 248  Q
    ||| |||  |||||||||||| |||||| ||||||||||| ||||  ||||| |||||| |||||||||||||||||| |  |||||  ||| ||||||     
T  9294736 catttttccatgaaacttatttcaagaaaaatacaaaaaattatacttcaaactactatcttttagttttcttaataaatgcgaattgatgt-ttttttt 9294834  T
Q  249 cttataaattaggacggagggagtacataa 278  Q
    | ||||||||||||| ||||||||| ||||    
T  9294835 cctataaattaggactgagggagtaaataa 9294864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 57 - 275
Target Start/End: Complemental strand, 29514188 - 29513971
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||  || |||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||  |||  |||| | |||| ||||||||||||    
T  29514188 catcttttttaatgtaaaattaaatgcaaattgcattcaatttgttctcatttttattttctctataatttttaaccaatgaaaattatttttacatctt 29514089  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    || |||||| |||||| ||| |||| |||||||| |||| |||||||||||| || ||| |||||||||||||| ||||||  | |||||| ||||||||    
T  29514088 ttcatgaaatttattctaaggagaacacaaaaaattatacctcaaattactaagtgtta-ttttcttaataagtgtgaattactgttttttgcttataaa 29513990  T
Q  257 ttaggacggagggagtaca 275  Q
    |||||||||||||||||||    
T  29513989 ttaggacggagggagtaca 29513971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 98 - 273
Target Start/End: Original strand, 10979197 - 10979372
Alignment:
Q  98 ttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataac 197  Q
    ||||||||||||||||||||| ||||||  |||   ||| |||||| |||||||||||||  |||||||||||||||||||||| |||||||| |||| |    
T  10979197 ttgttctcctttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaacttattccaagaagaacacaaaaaattatacc 10979296  T
Q  198 tcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    |||||| |||| || |||||||||||||| ||| |||||| || |||||| |||||||||||||||||||||||||    
T  10979297 tcaaatcactaagtgttagttttcttaatgagtgtgaattagtgttttttgcttataaattaggacggagggagta 10979372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 57 - 274
Target Start/End: Original strand, 28424261 - 28424477
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| |   |||||| || |   | |||| ||||||||||||    
T  28424261 catcttttccaatgtaaaattaaatgcaaattgtattcaatttgttctcctttttattttctcc---ataatttttaaccgaaaattatttttacatctt 28424357  T
Q  157 tttatgaaacttattccaagaagaatacaaaa--aactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttata 254  Q
    |  ||||||||||||||||| |||| ||||||     || | ||||||| |||| || |||||||||||||||||||| |||| || |||||| ||||||    
T  28424358 tccatgaaacttattccaaggagaacacaaaattttttacatctcaaatcactaagtgttagttttcttaataagtatcaattagtgttttttgcttata 28424457  T
Q  255 aattaggacggagggagtac 274  Q
    ||||||||||||||||||||    
T  28424458 aattaggacggagggagtac 28424477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 61 - 262
Target Start/End: Original strand, 28492511 - 28492712
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||||||||||| || || ||||||||||||||||||  |||||  |||  |||| |||||| ||||||||| |||  |    
T  28492511 ttttccaatgtaaaattaaatgcaaattgcattcaacttattctcctttttattttctctataatttttaaccaatgagaattatttttacatatttcca 28492610  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    |||||||||||||||| |||| |||||||| |||| ||||||| | || || |||||||||||||||||| ||| || ||  ||||| ||||||||||||    
T  28492611 tgaaacttattccaaggagaacacaaaaaattatatctcaaatcattaagtgttagttttcttaataagtgtgatttagtgctttttgcttataaattag 28492710  T
Q  261 ga 262  Q
    ||    
T  28492711 ga 28492712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 108 - 273
Target Start/End: Complemental strand, 38071568 - 38071403
Alignment:
Q  108 ttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattact 207  Q
    |||| |||||||||||||  |||  |||| |||||| |||||||||||||  |  |||||||||| ||| ||||||||||||| ||||  |||||| |||    
T  38071568 tttttttttcttcataatttttaaccaatgagaattatttttacatctttccaaaaaacttattctaaggagaatacaaaaaattatacttcaaatcact 38071469  T
Q  208 atgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    | || |||||||||||||||||| |||||| || |||||| |||||||||||||||||||||||||    
T  38071468 aagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagggagta 38071403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 57 - 223
Target Start/End: Complemental strand, 4033844 - 4033678
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||  |||  |||  |||||| ||||||||||||    
T  4033844 catctttttcaatgtaaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaacgagaattatttttacatctt 4033745  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttctt 223  Q
    |  ||||||||||||  ||| |||| |||||||| |||| ||||||| | || || |||||||||||    
T  4033744 tccatgaaacttattttaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttctt 4033678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 32010094 - 32010274
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||| |||| |||| |||||||  ||||| || ||  |||| | |||| ||||||||||||    
T  32010094 atctttttcaaaggaaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactac-caatgaaaattatttttacatctt 32010192  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaattt 238  Q
      ||| ||||||||| |||  | || |||||||||||||   |||| |||||||| |||||||||||||||||| |||||||    
T  32010193 cctataaaacttatttcaaagataacacaaaaaactatattacaaactactatgtattagttttcttaataagtgtgaattt 32010274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 273
Target Start/End: Complemental strand, 15858742 - 15858642
Alignment:
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||| | |||||| || |||||| ||||||||||||||||||||||||    
T  15858742 caaggagaacacaaaaaattatacctcaaatcactaagtattagttttcttaataaatgtgaattagtgttttttgcttataaattaggacggagggagt 15858643  T
Q  273 a 273  Q
    |    
T  15858642 a 15858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 3201331 - 3201534
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||||||||||||||||| ||| |||||| |    
T  3201331 taaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 3201430  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga-atttgtattttttacttataaattaggacggaggg 269  Q
    |||||  | || |||||||||||||  | |||||  |||||||||||||||||||||||| |||  ||||| |||||| ||||||| || |||||||||     
T  3201431 tccaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtgatttttgttttttttgcttataatttgggacggagga 3201530  T
Q  270 agta 273  Q
    ||||    
T  3201531 agta 3201534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 33933009 - 33932914
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaa 235  Q
    |||||| ||||||||||| ||| ||||||| |||||||| ||||||||||| ||||   |||| ||||||||||||||||||||||||||| ||||    
T  33933009 aattgtgtttacatctttctataaaacttaatccaagaataatacaaaaaattatactacaaaatactatgttttagttttcttaataagtgtgaa 33932914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 22162308 - 22162368
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  22162308 atcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttct 22162368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 58 - 274
Target Start/End: Original strand, 26998309 - 26998529
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| |||| |||||||  ||||| || ||  |||| | |||||||||||||||||    
T  26998309 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaacta-ccaatgaaaattgtttttacatctt 26998407  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga----atttgtattttttactta 252  Q
      ||| |||||||||  ||  | || ||||||||||||    |||| ||| ||||||||||||||||||||| | |||     ||| | |||||| ||||    
T  26998408 cctataaaacttattttaaagataacacaaaaaactatcttacaaactaccatgttttagttttcttaataaatgtgatttttttttttttttttgctta 26998507  T
Q  253 taaattaggacggagggagtac 274  Q
    |||  |||||||||||||||||    
T  26998508 taatataggacggagggagtac 26998529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 29524194 - 29523994
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| ||||||||||  ||||  ||||||||| | |||||  | |   |||| | |||||||||||||||||   |||||||||||||    
T  29524194 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattc 29524095  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||  | || |||||||| |||    ||||||  |||| |||||||||| |||||||| ||| |||   |||||| ||||||| ||||||||||||||||    
T  29524094 caaagaaaacacaaaaaattatgctacaaattcttatgctttagttttcataataagtgtgatttttgtttttttgcttataatttaggacggagggagt 29523995  T
Q  273 a 273  Q
    |    
T  29523994 a 29523994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 276
Target Start/End: Original strand, 45660370 - 45660577
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||||| |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  45660370 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 45660469  T
Q  171 tccaagaagaatacaaaaaactataactcaaatta---ctatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggag 267  Q
    | |||  | || |||||||||||||   |||||||    |||||||||||||||||||||| | || |||| | |||||| ||| ||| || ||||||||    
T  45660470 ttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttttcttaataaatgtg-attttttttttttgcttttaatttgggacggag 45660568  T
Q  268 ggagtacat 276  Q
    |||||||||    
T  45660569 ggagtacat 45660577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 6766027 - 6765887
Alignment:
Q  132 tcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagta 231  Q
    ||||||| |||||||||||||||||  ||| ||| |||||||||  | || | |||||||||||  |||||||  ||||||||| ||||||||||||||     
T  6766027 tcaataaaaattgtttttacatcttcctataaaatttattccaatgaaaacataaaaaactatacttcaaatttttatgttttaattttcttaataagtg 6765928  T
Q  232 tgaatttgtattttttacttataaattaggacggagggagta 273  Q
    || |||||  |||||| |||| || |||||||||| ||||||    
T  6765927 tg-atttgatttttttccttacaatttaggacggaaggagta 6765887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 8701676 - 8701808
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||||||   ||||||||||||||||  | || | ||||||||||    ||||||  |||||||||||||||||||||||  ||| ||||    
T  8701676 aattgtttttacatcttcccatgaaacttattccaaagaaaacataaaaaactatgctacaaatttttatgttttagttttcttaataagcgtgattttg 8701775  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | |||||| ||||||| || ||||||||||||||    
T  8701776 t-ttttttgcttataatttgggacggagggagta 8701808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 921640 - 921525
Alignment:
Q  132 tcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagta 231  Q
    ||||||| |||| |||||| ||||||||||||||||||||| ||||| || |||| ||||||||   |||| ||| || |||||  |||||||||||||     
T  921640 tcaataaaaattatttttaaatctttttatgaaacttattcaaagaataacacaagaaactatactacaaactacaatattttaactttcttaataagtg 921541  T
Q  232 tgaatttgtatttttt 247  Q
     |||||| ||||||||    
T  921540 cgaatttctatttttt 921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 35517128 - 35517330
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||| |||||||||||   ||| |||||| |    
T  35517128 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctcactataaaactttt 35517227  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    |||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| |||||||| |||||    
T  35517228 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacgaaggga 35517327  T
Q  271 gta 273  Q
    |||    
T  35517328 gta 35517330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 35022973 - 35023069
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt 237  Q
    |||||||||||||||||  ||||||||||| ||||| || || |||||||| ||||   ||||||  |||||||||||||||||||||||| ||||||    
T  35022973 aattgtttttacatcttcctatgaaacttactccaaaaa-aacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgaatt 35023069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 276
Target Start/End: Complemental strand, 40808805 - 40808667
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt-- 237  Q
    |||||||||||||||||   ||||||||||||||||  | || ||||||||||||    ||||||  |||| ||||||||||||||||||| ||| ||      
T  40808805 aattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtgattttt 40808707  T
Q  238 -tgtattttttacttataaattaggacggagggagtacat 276  Q
     | | |||||| ||||||| ||||||||||||||||||||    
T  40808706 gttttttttttgcttataatttaggacggagggagtacat 40808667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 6110285 - 6110147
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattcc-aagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaattt 238  Q
    |||||||||||||||||  ||| |||||| |||| ||||| || ||||||| |||||   ||||||  |||||||||||||||||||||||| ||| |||    
T  6110285 aattgtttttacatcttcctataaaactttttccgaagaa-aacacaaaaagctatactccaaattcttatgttttagttttcttaataagtgtgatttt 6110187  T
Q  239 ----gtattttttacttataaattaggacggagggagtac 274  Q
         | |||||| ||||||| ||||||||||||||||||    
T  6110186 tttatttttttttgcttataatttaggacggagggagtac 6110147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 11617098 - 11617234
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||||||  ||| |||||| || |||  | ||||| ||||||||||   ||||||  ||||||||| |||||||||||||| ||| |||     
T  11617098 aattgtttttacatcttcctataaaacttttttcaaagaaaataccaaaaactatactccaaattcttatgttttaattttcttaataagtgtgattttt 11617197  T
Q  240 ta---ttttttacttataaattaggacggagggagta 273  Q
    ||   |||||| ||||||| || ||||||||||||||    
T  11617198 tatttttttttgcttataatttgggacggagggagta 11617234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 12872106 - 12872168
Alignment:
Q  52 aaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttatt 114  Q
    |||| |||||||| |||||||||||||||| |||||| |||||||||| ||||||||| ||||    
T  12872106 aaaatcatctttttcaaagtaaaattaaatacaaatttcatttaatttattctcctttctatt 12872168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 247
Target Start/End: Original strand, 25572053 - 25572225
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| ||||||||||  ||||  ||  ||||| | |||||  | ||| |||| | |||||||||||||||||   |||||||||||||    
T  25572053 aaattaaatgcaaattacatttaattttctctctcttccatttt-tccataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttattc 25572151  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
    |||  | || ||||||||||||    ||||||  |||| ||||||||||||||||||| || |||| ||||||||    
T  25572152 caaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtg-atttttatttttt 25572225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 32273666 - 32273839
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatcttttt 159  Q
    |||||||||| ||||||||||| ||| |||||| |||||| |||| |||| |||||||  ||||| || ||  |||| | ||||||||||| |||||  |    
T  32273666 ttttccaaaggaaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaacta-ccaatgaaaattgtttttatatcttcct 32273764  T
Q  160 atgaaacttattccaagaagaatacaaaaaactataactcaaat----tactatgttttagttttcttaataagt 230  Q
    || ||||||||| |||  | || ||||||||||||    |||||    |||||||||||||||||||||||||||    
T  32273765 ataaaacttatttcaaagataacacaaaaaactatgttacaaattgactactatgttttagttttcttaataagt 32273839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 45085331 - 45085463
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||||||  ||| |||||| || |||  | ||||||||||||||||   ||||||  ||||||||| |||||||||||||| || ||||     
T  45085331 aattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaaactatactccaaattcttatgttttaattttcttaataagtgtg-atttt 45085429  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | | | |  ||||||| |||||||||||||||||    
T  45085430 tttctctctcttataatttaggacggagggagta 45085463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 20380115 - 20380175
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| |||| |||||||    
T  20380115 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctcgttttcattttct 20380175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 275
Target Start/End: Original strand, 19264174 - 19264311
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaatt- 237  Q
    |||||||||||||||||  ||| |||||| ||||||  | || |||||||| |||| ||| |||||  |||||||||||||||||||||||| ||| ||     
T  19264174 aattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaattata-ctctaaattcttatgttttagttttcttaataagtgtgatttt 19264272  T
Q  238 -tgtattttttacttataaattaggacggagggagtaca 275  Q
     | | |||||| ||||||| ||  |||||||||||||||    
T  19264273 cttttttttttgcttataatttgagacggagggagtaca 19264311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 228
Target Start/End: Original strand, 38070988 - 38071157
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||| ||| |||||| |||||| |||  |||| |||||||  ||||| || ||  |||| | |||||||||||||||||    
T  38070988 atcttttccaaaggaaaattaaatgtaaagtgcattcaatttgctcta-ttttcattttctctataatcaactac-caatgaaaattgtttttacatctt 38071085  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
      | | ||||||||| |||  | || ||||||||||||    |||| ||| |||||||||||||||||||||    
T  38071086 cctgtaaaacttatttcaaagataacacaaaaaactatgttacaaactaccatgttttagttttcttaataa 38071157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 38564756 - 38564670
Alignment:
Q  187 aaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    |||| |||| ||||||| ||||  | |||||||||||||||||| ||||||    ||||||  ||||||||||||||||||||||||    
T  38564756 aaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaattatcgttttttgtttataaattaggacggagggagta 38564670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 12938249 - 12938406
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| |||| |  ||  ||||  ||||||||||| |||||| | ||  |||| | |||||||||||||  ||  ||| |||||||||     
T  12938249 aaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcctataaaacttattt 12938348  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||  | |  |||||||||||||   ||||||  ||||||||||||||||||||||||    
T  12938349 caaagaaagcacaaaaaactatactccaaattcttatgttttagttttcttaataagt 12938406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 15858779 - 15858743
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatt 93  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15858779 catcttttccaatgtaaaattaaatgcaaattgcatt 15858743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 23987091 - 23987015
Alignment:
Q  159 tatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaa 235  Q
    |||||| |||||||||||| ||| | |||||  ||||    |||||| |||||||||||||||||||||||||||||    
T  23987091 tatgaagcttattccaagatgaacataaaaagttatattctaaattattatgttttagttttcttaataagtatgaa 23987015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 9864805 - 9864714
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaa-ctataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||||| ||||   ||||||||||||||||  | || |||||||| |||||   ||||||  ||||||||||||||||||||||||    
T  9864805 aattgtttttacctcttcccatgaaacttattccaaagaaaacacaaaaaaactatactccaaattcttatgttttagttttcttaataagt 9864714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 28858453 - 28858520
Alignment:
Q  207 tatgttttagttttcttaataagtatgaatttgtatttttta-cttataaattaggacggagggagta 273  Q
    ||||||||||||||||||||| || ||| ||| | ||||||  ||||||| |||||||||||||||||    
T  28858453 tatgttttagttttcttaatatgtgtgattttttttttttttgcttataatttaggacggagggagta 28858520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 44442123 - 44442221
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    |||||||| |||| ||||||||||||||| |||||| |||||| | || |||| |||||||  ||||| || || ||||| | |||||||||||||||||    
T  44442123 atcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaacta-tcaatgaaaattgtttttacatctt 44442221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 28599234 - 28599144
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||| ||||||||||||  ||| || ||| ||||||  | || |||||||||||||   ||||||  ||||||||||||||||||||||||    
T  28599234 aattatttttacatcttcctataaatctttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 28599144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 9709506 - 9709565
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    |||||| |||||| |||||||| ||||||||||||| |||||||||||  ||| |||||||    
T  9709506 atctttaccaaagaaaaattaa-tgcaaattgcattcaatttgttctctctttcattttct 9709565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 14565598 - 14565570
Alignment:
Q  13 aatataagcaaaaaagactaacttttatg 41  Q
    |||||||||||||||||||||||||||||    
T  14565598 aatataagcaaaaaagactaacttttatg 14565570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 230
Target Start/End: Complemental strand, 33198783 - 33198627
Alignment:
Q  74 aattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattcc 173  Q
    ||||||||||||||| |||| |||||  ||||  ||| ||||||| |||||  | ||  |||| | |||||||||||||||||  ||| |||||| ||      
T  33198783 aattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctataaaacttctttt 33198684  T
Q  174 aagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    ||  | || ||||||||||| |   ||||||  ||| ||||||||||||||||||||    
T  33198683 aaagaaaacacaaaaaactagagtccaaattcttatattttagttttcttaataagt 33198627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 6e-66; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 36189145 - 36188922
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| | ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| ||| ||||  |||| ||||||| ||||    
T  36189145 aaaaaatcttcttttccaaagtaaaattaaatgcaaattgcattcaatttgttcacctttttattttattcacaatcattaaccaatgagaattggtttt 36189046  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttac 249  Q
    || |||||  |||||||||||| |||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||| |||||| |    
T  36189045 acttctttccatgaaacttatttcaaggagaatacaaaaaactatacctcaaattactgtgttttagatttcttaataagtgtgaatttgtgttttttgc 36188946  T
Q  250 ttataaattaggacggagggagta 273  Q
    ||||||||| ||| ||||||||||    
T  36188945 ttataaattgggatggagggagta 36188922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 52251980 - 52252240
Alignment:
Q  13 aatataagcaaaaaagactaacttttatgnnnnnnnnaaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctccttttta 112  Q
    |||||||||||||||||  ||||||||||        || ||| |||||||||||| |||||||||||||||| || |||||||||||||||| ||||||    
T  52251980 aatataagcaaaaaagatcaacttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttacatttaatttgttctctttttta 52252079  T
Q  113 ttttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgtt 212  Q
    |||||| ||||||  ||| ||||| |||||| | |||||||||||  |||||||||||||||||||||| |||||||| ||||  |||||| |||| ||     
T  52252080 ttttctccataatttttaatcaatgagaattatatttacatctttccatgaaacttattccaagaagaacacaaaaaattatacttcaaatcactaagtg 52252179  T
Q  213 ttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagtacat 276  Q
    ||||||||||   ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  52252180 ttagttttct---taagtatgaattaatattttttacttataaattaggacggagggagtacat 52252240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 26641244 - 26641028
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||| ||||||    
T  26641244 catctttttcaaggtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttgcatctt 26641145  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  26641144 tccatgaaacttattccaaggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 26641045  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  26641044 ttaggacggagggagta 26641028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 53020171 - 53020387
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||   ||| |||||| ||||||||||||    
T  53020171 catctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaactaatgagaattatttttacatctt 53020270  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  || ||||||||||||||||||| |||||||| |||||||||||| ||||  | |||||||||||||||||| |||||| || |||||| ||||||||    
T  53020271 tccataaaacttattccaagaagaacacaaaaaattataactcaaatcactaaatgttagttttcttaataagtgtgaattagtgttttttgcttataaa 53020370  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  53020371 ttaggacggagggagta 53020387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 55400726 - 55400942
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  55400726 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaatgagaattatttttacatctt 55400825  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||  |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  55400826 tccatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 55400925  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  55400926 ttaggacggagggagta 55400942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 46296209 - 46295992
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  46296209 catcttttccgatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 46296110  T
Q  157 tttatgaaacttattccaagaagaatac-aaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataa 255  Q
    |  ||||||||||||||||| |||| || |||||| |||| ||||||| ||||    |||||||||||||||||| |||||| |||||||||||||||||    
T  46296109 tccatgaaacttattccaaggagaacacaaaaaaattatacctcaaatcactaaccgttagttttcttaataagtgtgaattagtattttttacttataa 46296010  T
Q  256 attaggacggagggagta 273  Q
    ||||||||||||||||||    
T  46296009 attaggacggagggagta 46295992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 21654233 - 21654449
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||   ||| | |||| ||||||||||||    
T  21654233 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacaaatgaaaattatttttacatctt 21654332  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  21654333 tccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 21654432  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  21654433 ttaggacggagggagta 21654449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 58 - 274
Target Start/End: Original strand, 51309402 - 51309619
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||||| ||||| |||| ||| |||||| ||||  ||||||||||||||| |||||||||    
T  51309402 atcttttctaaattaaaattaaatgcaaattgcattcaatttgttcccctttctattctctccataatcattaaccaataagaattgtttatacatcttt 51309501  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgt-attttttacttataaa 256  Q
     ||||||||||||||||||||||| |||||||| |||| |||||| |||||||||||  |||||||||||| | |||||||||  |||||| ||||||||    
T  51309502 ctatgaaacttattccaagaagaacacaaaaaattatacctcaaactactatgtttttattttcttaataaatgtgaatttgtgtttttttgcttataaa 51309601  T
Q  257 ttaggacggagggagtac 274  Q
    || ||||||| |||||||    
T  51309602 ttgggacggaaggagtac 51309619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 32322370 - 32322155
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||| ||| |||||||||||| ||| ||||||||||||| |||||||||||||||||| ||||||  |||  |||| |||||| ||||| |||||||    
T  32322370 atctttttcaatgtaaaattaaatacaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattatttttgcatcttt 32322271  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaat 257  Q
      ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || ||| |||||||||||||| |||||| || |||||| |||||||||    
T  32322270 ccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaattagtgttttttgcttataaat 32322171  T
Q  258 taggacggagggagta 273  Q
    ||||||||||||||||    
T  32322170 taggacggagggagta 32322155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 61 - 275
Target Start/End: Original strand, 31126204 - 31126418
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| | |||| |||||||||||||  |    
T  31126204 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttcca 31126303  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    | ||||||||| |||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| |||||||||||     
T  31126304 taaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaa 31126403  T
Q  261 gacggagggagtaca 275  Q
     || |||||||||||    
T  31126404 aacagagggagtaca 31126418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 61 - 266
Target Start/End: Original strand, 46580528 - 46580732
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| ||||| |||||| |||||||||||||  |    
T  46580528 ttttacaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaatcaatgagaattatttttacatctttcca 46580627  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    || |||||||| |||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||||||    
T  46580628 tg-aacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattag 46580726  T
Q  261 gacgga 266  Q
     |||||    
T  46580727 aacgga 46580732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 57 - 274
Target Start/End: Original strand, 49068039 - 49068256
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  49068039 catctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 49068138  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||   || |||| |||||||| |||| ||||||| |||| || |||||||||||||||| | ||||||  |||||||| ||||||||    
T  49068139 tccatgaaacttatttataggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataaatgtgaattaatattttttgcttataaa 49068238  T
Q  257 ttaggacggagggagtac 274  Q
    ||||||||||| ||||||    
T  49068239 ttaggacggagagagtac 49068256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 51255174 - 51255390
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||   ||| |||||| ||||||||| ||    
T  51255174 catcttttccaatctaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaactaatgagaattatttttacatatt 51255273  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| | || |||| |||||||| ||||  ||| ||||||| || |||||||||||||||| ||||||||  |||||||| ||||||||    
T  51255274 tccatgaaacttatttctaggagaacacaaaaaattatacttcatattactacgtgttagttttcttaataaatatgaattaatattttttgcttataaa 51255373  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||| ||||||    
T  51255374 ttaggacggaaggagta 51255390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 87 - 265
Target Start/End: Complemental strand, 45347815 - 45347637
Alignment:
Q  87 ttgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaa 186  Q
    |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  ||||||||||||||||| |||| ||||    
T  45347815 ttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaa 45347716  T
Q  187 aaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacgg 265  Q
    ||||  ||| ||||||| |||| || |||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  45347715 aaaatcatacctcaaatcactaagtgttagttttcttaataaatatgaattagtgttttttacttataaattaggacgg 45347637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 37324216 - 37323999
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  37324216 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgtttccctttttattttctccataatttttaaccaatgagaattatttttacatctt 37324117  T
Q  157 tttatg-aaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataa 255  Q
    |  ||| ||||||||| |||  | || |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| |||||||    
T  37324116 tccatgaaaacttatttcaaagataacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataa 37324017  T
Q  256 attaggacggagggagta 273  Q
    ||||| ||||||||||||    
T  37324016 attagaacggagggagta 37323999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 72 - 273
Target Start/End: Original strand, 28793165 - 28793362
Alignment:
Q  72 aaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttatt 171  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  |||||| |||||    
T  28793165 aaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaatttatt 28793264  T
Q  172 ccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggag 271  Q
    ||||| | || |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  ||||||||||||    ||||||||||||||||    
T  28793265 ccaaggataacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattattattttttactt----attaggacggagggag 28793360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 57 - 259
Target Start/End: Original strand, 43575945 - 43576147
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  43575945 catcttttctaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgataattatttttacatctt 43576044  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||| ||| |||| ||||||||  ||| ||||||| |||| || ||| ||||||||||||||||||||| || ||||||| |||||||    
T  43576045 tccatgaaacttattcgaaggagaacacaaaaaatcatacctcaaatcactaagtgttaattttcttaataagtatgaattagtgttttttagttataaa 43576144  T
Q  257 tta 259  Q
    |||    
T  43576145 tta 43576147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 51426607 - 51426823
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||| || ||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  51426607 catcttttctaatgtaaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctt 51426706  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||| |||||| |||||||| |||||||| |||| ||||||| ||||  | |||||||| ||||||||  | |||| || |||||| ||||||||    
T  51426707 tccatgaaatttattctaagaagaacacaaaaaattatacctcaaatcactaaatgttagtttttttaataagcgtaaattagtgttttttgcttataaa 51426806  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  51426807 ttaggacggagggagta 51426823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 57 - 256
Target Start/End: Original strand, 1335098 - 1335297
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||  |||  |||||| |||| ||||||||||||    
T  1335098 catctttttcaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaataaaaattatttttacatctt 1335197  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| ||||||||  ||| ||||||  |||| || |||||||||||||||||| ||||||  | |||||| ||||||||    
T  1335198 tccatgaaacttattccaaggagaacacaaaaaataatatctcaaaacactaagtattagttttcttaataagtgtgaattaatgtttttttcttataaa 1335297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 34105476 - 34105697
Alignment:
Q  13 aatataagcaaaaaagactaacttttatgnnnnnnnnaaaaaaccatcttttccaaagtaaaattaaat-----gcaaattgcatttaatttgttctcct 107  Q
    ||||||| |||||||||  ||||||||||        |||||| ||||||||| |||||||||||||||     | |||||||||| |||||||||| ||    
T  34105476 aatataaacaaaaaagatcaacttttatgttatttcaaaaaaatcatcttttcaaaagtaaaattaaattaaatgtaaattgcattgaatttgttctgct 34105575  T
Q  108 ttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattact 207  Q
    || |||| |||||||||| ||||  |||||||||||||||||||||||||  || ||||||||| |||||| || ||||||||||||| || ||| ||||    
T  34105576 ttctattctcttcataatcattaaccaataagaattgtttttacatctttccataaaacttattacaagaataaaacaaaaaactataccttaaactact 34105675  T
Q  208 atgttttagttttcttaataag 229  Q
    ||||||| ||||||||||||||    
T  34105676 atgtttttgttttcttaataag 34105697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 95 - 273
Target Start/End: Original strand, 34022625 - 34022803
Alignment:
Q  95 aatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactat 194  Q
    ||||||||||||||||||||||||  |||||  |||  |||| |||||| |||||||||||||  || ||||||||| |||| |||| |||||||| |||    
T  34022625 aatttgttctcctttttattttctctataatttttaaccaatgagaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattat 34022724  T
Q  195 aactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    | ||||||| |||| || |||||||||||||||||| |||||| || |||||| |||||||||||||||| ||||||||    
T  34022725 acctcaaatcactaagtattagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgaagggagta 34022803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 16739287 - 16739081
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| ||||||||||||     |||||||||||||||| ||||||||||||||| ||||||  |||  |||| |||||| |||||| |||||    
T  16739287 catcttttccaatgtaaaattaaat-----ttgcatttaatttgttttcctttttattttctccataatttttaaccaatgagaattatttttatatctt 16739193  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||| ||| |||| ||||||| |     | |||||||||||||||||| |||||| || |||||  ||||||||    
T  16739192 tccatgaaacttattccaaggagaacacaacaaattatacctcaaataa-----tgttagttttcttaataagtgtgaattagtgtttttggcttataaa 16739098  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  16739097 ttaggacggagggagta 16739081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 7886753 - 7886530
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| |||||||||||||| ||||| ||||||||| |||||| |||||| ||||  ||| |||||||  ||||  | ||  |||| | ||||||||||    
T  7886753 aaaaaatcatcttttccaaagaaaaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgttttt 7886654  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttac 249  Q
    |||||||| ||| ||| ||||| |||||| || |||| |||||||  | |||| ||||||||||||||||||||||||||| ||| ||| | |||||| |    
T  7886653 acatctttctataaaatttatttcaagaataacacaagaaactatgtcacaaactactatgttttagttttcttaataagtttgattttattttttttgc 7886554  T
Q  250 ttataaattaggacggagggagta 273  Q
    ||||||  | ||||||||||||||    
T  7886553 ttataatattggacggagggagta 7886530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 57 - 264
Target Start/End: Original strand, 46820037 - 46820229
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||               |||||| ||| ||||||||    
T  46820037 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccat---------------agaattatttatacatctt 46820121  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||| ||||||| ||||||| ||||||||  ||| ||||||| |||| || |||||||||||||||| | |||||| ||  ||||||||||||||    
T  46820122 tccatgaaatttattccgagaagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataaatgtgaattagtggtttttacttataaa 46820221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 45781385 - 45781549
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||| |||| ||||||  |||  |||| |||||| ||||||||||||    
T  45781385 catcttttccaatgtaaaattaaattcaagttgcatttaatttgttctcatttttatcttctccataatttttaaccaatgagaattatttttacatctt 45781484  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttc 221  Q
    |  ||||||||||||| ||  |||| |||||||| ||||  |||||| |||| || |||||||||    
T  45781485 tccatgaaacttattctaaagagaacacaaaaaattatacatcaaatcactaagtgttagttttc 45781549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 23513555 - 23513686
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  23513555 catctttttcaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatttttacatctt 23513654  T
Q  157 tttatgaaacttattccaagaagaatacaaaa 188  Q
    |  |||||||||||| |||  |||| ||||||    
T  23513655 tccatgaaacttatttcaaagagaacacaaaa 23513686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 104 - 247
Target Start/End: Original strand, 30612213 - 30612356
Alignment:
Q  104 tcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaat 203  Q
    ||||||||||||| | |||||| ||||  |||| |||||||||||||||||||| ||||||||| |||  ||  |||| | |||||| |||| || ||||    
T  30612213 tcctttttattttttccataatcattaaccaatgagaattgtttttacatctttctatgaaactcattttaaagagaacataaaaaattatatcttaaat 30612312  T
Q  204 tactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||    
T  30612313 tactatatttttgttttcttaataagtgtgaatttgtatttttt 30612356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 52172142 - 52172028
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||  ||||||||||||    
T  52172142 catctttttcaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaatcatttttacatctt 52172043  T
Q  157 tttatgaaacttatt 171  Q
    || || |||||||||    
T  52172042 ttcataaaacttatt 52172028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 134 - 258
Target Start/End: Original strand, 46303643 - 46303767
Alignment:
Q  134 aataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatg 233  Q
    ||||||||||||| |||||||||||| |||||||| ||  | |||||| | |||||| ||||  | ||||||||||||||||||||||||||||| ||||    
T  46303643 aataagaattgttcttacatctttttgtgaaactttttttaggaagaacataaaaaattatattttaaattactatgttttagttttcttaataaatatg 46303742  T
Q  234 aatttgtattttttacttataaatt 258  Q
    ||||  |||||||| ||||||||||    
T  46303743 aattgatatttttttcttataaatt 46303767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 271
Target Start/End: Original strand, 47864200 - 47864400
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| ||||| |||||  ||| ||||| |||||||| | || ||||| | |||||||||||||||||  ||| |||||| |    
T  47864200 taaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctataaaactttt 47864299  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    | |||  | ||| ||||||||||||   ||||||   ||||||||||||||||||||| | ||| ||| | |||||| ||||||| |||||||||| |||    
T  47864300 ttcaaagaaaatgcaaaaaactatactccaaattctcatgttttagttttcttaataaatgtgattttttcttttttgcttataatttaggacggacgga 47864399  T
Q  271 g 271  Q
    |    
T  47864400 g 47864400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 71 - 277
Target Start/End: Complemental strand, 7866598 - 7866390
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||| ||||| |||| |||||  | ||  ||||||||| | |||||  | || ||||| | ||||||||||||||||| |||| |||||| |    
T  7866598 taaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcttataaaactttt 7866499  T
Q  171 tccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaatttgta--ttttttacttataaattaggacggag 267  Q
    | |||  | |||| ||||||||||| ||| |||||  |||||||||||||||||||||||| ||| ||| |   |||||||||||||| |||||||||||    
T  7866498 ttcaaagaaaataaaaaaaactata-ctctaaattcttatgttttagttttcttaataagtgtgatttttttctttttttacttataatttaggacggag 7866400  T
Q  268 ggagtacata 277  Q
    ||||||||||    
T  7866399 ggagtacata 7866390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 50651152 - 50650951
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||||||||||| |||||  | || ||||| | |||||||||||||||||  ||| |||||| |    
T  50651152 taaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttt 50651053  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    | |||  | || |||||||||||||  |||||||  |||||||||||||||||||||||| || |||| | |||||| ||||||   ||| |||||||||    
T  50651052 tgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttttcttaataagtgtg-attttttttttttgcttatattatagaacggaggga 50650954  T
Q  271 gta 273  Q
    |||    
T  50650953 gta 50650951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 23209416 - 23209194
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||| ||||||  ||||||||||||||||||||| | | |||||||| ||| |||||||   |||  | ||  |||||| |||| |||||    
T  23209416 aaaaaatcatctttcccaaagagaaattaaatgcaaattgcattcattatgttctccctttcattttctctctaactaataaccaataaaaattattttt 23209317  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttac 249  Q
     ||||||| ||| ||||||||| |||||| || || | |||||||| | |||| ||| || ||||| |||||||||||| ||||||  | | || ||| |    
T  23209316 tcatctttctataaaacttatttcaagaataacacgagaaactatatcacaaactacaatattttaattttcttaataaatatgaaaatat-ttgttttc 23209218  T
Q  250 ttataaattaggacggagggagta 273  Q
    |||||| |||||||||||||||||    
T  23209217 ttataatttaggacggagggagta 23209194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 35963161 - 35963320
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||||||||||||||  ||||  ||| ||||||| |||||  | ||  |||||| |||||||||| ||||||  ||| |||||| |    
T  35963161 taaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctataaaactttt 35963260  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||  | || |||||||||||||   ||||||  ||||||||||||||||||||||||    
T  35963261 tccaaacaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 35963320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 30454852 - 30454687
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| ||||  ||| |||||||  ||||  | ||  |||||| ||||||||||||||||||    
T  30454852 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaataa-aattgtttttacatcttt 30454754  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttctta 224  Q
     ||| ||||||||| |||| | || |||| |||||||    |||| |||||||||||||||||||||    
T  30454753 ctataaaacttatttcaaggataacacaagaaactatgttgcaaactactatgttttagttttctta 30454687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 37042532 - 37042330
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||| | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  37042532 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttt 37042433  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    |||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| || |||||||||||    
T  37042432 tccaacgaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggacggaggga 37042333  T
Q  271 gta 273  Q
    |||    
T  37042332 gta 37042330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 58 - 230
Target Start/End: Complemental strand, 22479182 - 22479010
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| |||| |||||||  ||||| || ||  |||| | || ||||||||||||||    
T  22479182 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaacta-ccaatgaaaagtgtttttacatctt 22479084  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
      ||| ||||||||| |||  | || ||||||||||||    |||| |||||||||||||||||||||||||||    
T  22479083 cctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataagt 22479010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 21214231 - 21214423
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||  ||||||||||||||| |||||| |||||| |||| ||||||||||||  ||||| || ||  |||| | |||||||||||||||||    
T  21214231 atcttttccaaatgaaaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatcaacta-ccaatgaaaattgtttttacatctt 21214329  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaa---attactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
    | ||| ||||||||| ||| || || ||||||||||||    |||   | |||||||||||| |||||||||||||| ||| ||| | ||||||    
T  21214330 tctataaaacttatttcaaaaataacacaaaaaactatgttacaaactactactatgttttaattttcttaataagtgtgattttatttttttt 21214423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 8097143 - 8096974
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||||| ||||||||||||||| |||||| |||||| ||||  ||| |||||||  ||||  | ||  |||| | |||| ||||||||||||  ||    
T  8097143 ttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttccta 8097044  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    | ||||||||| |||| | || |||| |||||||    |||| |||||||||||||||||||||||||||    
T  8097043 taaaacttatttcaaggataacacaagaaactatgttgcaaactactatgttttagttttcttaataagt 8096974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 230
Target Start/End: Original strand, 10114901 - 10115073
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||| |||  |||| |||||||  ||||| || ||  |||| | |||||||||||||||||    
T  10114901 atcttttccaaaggaaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactac-caatgaaaattgtttttacatctt 10114999  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
      ||| ||||||||| |||  | ||||||||||| |||    |||| |||||||||||||||||||||||||||    
T  10115000 cctataaaacttatttcaaagataatacaaaaaattatgttacaaactactatgttttagttttcttaataagt 10115073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 26725104 - 26724906
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||| ||||||||| |||| | |||  ||||  || |||||||| |||||| | ||  |||| | ||||||||||||||||| | |  ||||||||||    
T  26725104 aaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctcagaaaacttattc 26725005  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||  | || |||||||| ||||  |||||||  ||| |||||||||||||||||||||||||||| | ||||||  ||| || || |||||||||||||    
T  26725004 caaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttaataagtatgaatttttttttttt--ttacaatttgggacggagggagt 26724907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 13541347 - 13541437
Alignment:
Q  183 acaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    |||||||| |||| |||||||||||| || ||| |||||||||||||| |||||| || ||||||  ||||||||||| ||||||||||||    
T  13541347 acaaaaaattatacctcaaattactaagtgttaattttcttaataagtgtgaattagtgttttttggttataaattagaacggagggagta 13541437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 233
Target Start/End: Original strand, 17587696 - 17587870
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||  |||| |||||||| || ||| ||||||||||||||||||  ||| |||||||  |||||       ||||  || ||||||||    
T  17587696 aaaaaatcatcttttttaaagaaaaattaagtgtaaagtgcatttaatttgttctctctttcattttctcaataat-------caat--gatttgttttt 17587786  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatg 233  Q
    |||||||  ||| ||||||||| |||||| || | || ||||||||   |||||||||||||||||||||||||||||| ||||    
T  17587787 acatcttcctataaaacttatttcaagaataacaaaagaaactatattgcaaattactatgttttagttttcttaataaatatg 17587870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 22456136 - 22455967
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| |||| |||||||  ||||| || ||  |||| | ||||||||||| |||||    
T  22456136 atcttttccaaaggaaaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataatcaacta-ccaatcaaaattgtttttatatctt 22456038  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaata 227  Q
      ||| ||||||||| |||    || ||||||||||||    |||| ||||||||||||||||||||||||    
T  22456037 cctataaaacttatttcaaagttaacacaaaaaactatgttacaaactactatgttttagttttcttaata 22455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 46303534 - 46303624
Alignment:
Q  59 tcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| | |||  |||||||| |||||| ||||  ||||||||||| |||||    
T  46303534 tcttttctaaagaaaaattaaatgcaaattgcatttaatttgttattcttcctattttctccataatcattaaccaataagaatttttttt 46303624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 2927300 - 2927501
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    ||||||||| |||||| ||||||||||  ||||  || |||||| |||||||  | ||  |||| | |||| ||||||||||||   || ||||||||||    
T  2927300 aaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccataaaacttattc 2927399  T
Q  173 caagaagaatacaaaaaa-ctataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggag 271  Q
    |||  | ||||||||||| ||||    ||||||  |||||||||||||||||||||| | ||| |||   |||||| ||||||| |||||||||||||||    
T  2927400 caaagaaaatacaaaaaaactatgctacaaattcttatgttttagttttcttaataaatgtgatttttgtttttttgcttataatttaggacggagggag 2927499  T
Q  272 ta 273  Q
    ||    
T  2927500 ta 2927501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 58 - 230
Target Start/End: Original strand, 10014259 - 10014431
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||  |||  ||||||||||||  ||||| || ||  |||| | |||||||||||||||||    
T  10014259 atcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactac-caatgaaaattgtttttacatctt 10014357  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
      ||| ||||||||| |||  | |||||||| || |||    |||| |||||||||||||||||||||||||||    
T  10014358 cctataaaacttatttcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagt 10014431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 58 - 230
Target Start/End: Original strand, 10252001 - 10252173
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||| |||  |||| |||||||  ||||| || ||  |||| | |||||||||||||||||    
T  10252001 atcttttccaaaggaaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactac-caatgaaaattgtttttacatctt 10252099  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
      ||| ||||||||| |||  | |||||||| || |||    |||| |||||||||||||||||||||||||||    
T  10252100 cctataaaacttatttcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagt 10252173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 13541265 - 13541326
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  13541265 catcttttccaatgtaaaattaaatgcaaattgcattcaatgtgttttcctttttattttct 13541326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 58 - 255
Target Start/End: Original strand, 34194878 - 34195074
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||||| ||||||||||||||| |||||| | |||| ||||  ||| |||||||  ||||  | ||  |||| | |||||||||||||||||     
T  34194878 atcttttccaaaggaaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttc 34194977  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataa 255  Q
     ||| ||||||||| || |   || |||| |||||||    |||| ||||||||||||||||||||||||||| || |||| | |||||| |||||||    
T  34194978 ctataaaacttatttcatgggtaagacaagaaactatgttgcaaactactatgttttagttttcttaataagtgtg-attttttttttttgcttataa 34195074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 36546620 - 36546734
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaattt 238  Q
    ||||| |||||||||||  |||||||||| ||||||  | ||||||||||||||| |||| |||||  |||||||||||||||||||||||| |||||||    
T  36546620 aattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactat-actctaaatttttatgttttagttttcttaataagtgtgaattt 36546718  T
Q  239 gtattttttacttataa 255  Q
     | |||||| |||||||    
T  36546719 -ttttttttgcttataa 36546734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 36561695 - 36561581
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaattt 238  Q
    ||||| |||||||||||  |||||||||| ||||||  | |||||||||||||||| ||| |||||  |||||||||||||||||||||||| |||||||    
T  36561695 aattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactata-ctctaaatttttatgttttagttttcttaataagtgtgaattt 36561597  T
Q  239 gtattttttacttataa 255  Q
     | |||||| |||||||    
T  36561596 -ttttttttgcttataa 36561581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 25242292 - 25242134
Alignment:
Q  72 aaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    ||||||||| ||||| |||||| ||||||||||| ||||||||||||  ||||| || ||| ||   | |||||||||| ||||||| ||| ||||||||    
T  25242292 aaaattaaacgcaaagtgcattcaatttgttctcttttttattttctctataatcaactat-caccgaaaattgttttttcatctttctataaaacttat 25242194  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |  ||  | || ||||||||||||    |||| |||||||||||||||||||||||||||    
T  25242193 tttaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataagt 25242134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 26208092 - 26208226
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaatt- 237  Q
    |||||||||||||||||   |||||||||||||||   | || ||||||||||||| ||| |||||  |||||||||||||||||||||||| ||| ||     
T  26208092 aattgtttttacatcttaccatgaaacttattccagacaaaacacaaaaaactata-ctctaaattcttatgttttagttttcttaataagtgtgatttg 26208190  T
Q  238 tgtattttttacttataaattaggacggagggagta 273  Q
     |  |||||||||||||| || ||||||||||||||    
T  26208191 aggtttttttacttataattttggacggagggagta 26208226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 255
Target Start/End: Complemental strand, 2994546 - 2994347
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| |||| |||||||  ||||| || ||  |||| | ||||| |||||||||||    
T  2994546 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaacta-ccaatgaaaattg-ttttacatctt 2994449  T
Q  157 --tt--tatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttactta 252  Q
      ||  ||| ||||||||| |||| | || ||||||||||||    |||| |||||| |||||||||||||||||||| || |||| | |||||| ||||    
T  2994448 ccttcctataaaacttatttcaagcataacacaaaaaactatgttacaaactactatattttagttttcttaataagtgtg-attttttttttttgctta 2994350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 38401370 - 38401563
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataa-taattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||  ||||||||||||||| | ||||||||||  |||| |||| |||||||  |||| ||| ||  |||| | |||| |||||||||||     
T  38401370 atcttttccaaaagaaaattaaatgcaaagtacatttaattttctctctttttcattttctctataattaacta-ccaatgaaaattatttttacatctc 38401468  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataact----caaattactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
      ||| ||||||||| |||  | || |||||||||||||  |    |||| ||||||||||||||||||||||||||| ||| ||| | ||||||    
T  38401469 cctataaaacttatttcaaagataacacaaaaaactatatatgttacaaactactatgttttagttttcttaataagtgtgattttatttttttt 38401563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 54725601 - 54725534
Alignment:
Q  206 ctatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagtac 274  Q
    ||||||||||||||||||||||||| ||| ||| | |||||| |||||||  |||||||||||||||||    
T  54725601 ctatgttttagttttcttaataagtgtgattttct-tttttttcttataatataggacggagggagtac 54725534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 228
Target Start/End: Complemental strand, 47444101 - 47443932
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| | || |||| |||||||  ||||| || ||  || | | ||||||||||||||| |    
T  47444101 atcttttccaaaggaaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaacta-ccagtgaaaattgtttttacatc-t 47444004  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    | ||| ||| ||||| |||  | || ||||||||||||    |||| || ||||||||||||||||||||||    
T  47444003 tctataaaatttatttcaaagataacacaaaaaactatgttacaaactaatatgttttagttttcttaataa 47443932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 9264629 - 9264756
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattac-tatgttttagttttcttaataagtatgaattt 238  Q
    |||||||||||||||||  ||| |||||| || |||  | || ||||||||||||| |||||| | | |||||||||||||||||||||||| |||        
T  9264629 aattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactata-ctcaaaattcatatgttttagttttcttaataagtgtga---- 9264723  T
Q  239 gtattttttacttataaattaggacggagggagt 272  Q
     | |||||| ||||||| || |||||||||||||    
T  9264724 -tttttttttcttataatttgggacggagggagt 9264756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 20626745 - 20626665
Alignment:
Q  192 tataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    |||| ||||||||||||| ||| ||||||||||| |||| ||||||| | || ||| |||||||||| ||| ||||||||||    
T  20626745 tatatctcaaattactatatttcagttttcttaagaagtgtgaatttat-ttattttcttataaattgggatggagggagta 20626665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 235
Target Start/End: Original strand, 31292634 - 31292778
Alignment:
Q  90 catttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaa 189  Q
    |||||||||||||||||| |  |||||||| |||| || ||  |||| | |||||||||||||||||   ||  |||| |||||||| |||| | || ||    
T  31292634 catttaatttgttctcctctc-attttctttataacaaataaccaatgaaaattgtttttacatcttcccatagaactaattccaaggagaacaaaagaa 31292732  T
Q  190 actataactcaaattactatgttttagttttcttaataagtatgaa 235  Q
    | ||||  ||||||||| ||||||||||||| | ||||||| ||||    
T  31292733 attatacttcaaattaccatgttttagttttttcaataagtgtgaa 31292778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 37075038 - 37075171
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||| ||||||||||  ||| |||||| ||||||  | || |||||||| ||||  |||||||  |||||||||||||| ||||||||||| | |||     
T  37075038 aattgtgtttacatcttcctataaaactttttccaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttttttaataagtatcattttt 37075137  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | ||  || ||||||| || || |||||||||||    
T  37075138 ttttcatttcttataatttggggcggagggagta 37075171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 247
Target Start/End: Complemental strand, 14752323 - 14752147
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||  | || ||||| | |||||||||||||||||  ||| ||  || |    
T  14752323 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaatttttt 14752224  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
    |||||  | || |||||||| ||||   ||||||  |||||||||||||||| ||||||| ||| ||| | ||||||    
T  14752223 tccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttctaaataagtgtgattttttttttttt 14752147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 28875484 - 28875572
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    ||||||||||||||||| |||| |||||| ||||||  | || ||||| |||||||   ||||||  |||| |||||||||||||||||    
T  28875484 aattgtttttacatcttcttataaaactttttccaaagaaaacacaaataactatagtccaaattcttatgctttagttttcttaataa 28875572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 49068543 - 49068643
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||  ||||| ||| |||||||||||||| ||||||||||||||| | | |||||   ||||| || ||||||||   ||||||||||    
T  49068543 aaaaaatcatcttttttaaagtgaaactaaatgcaaattgcttttaatttgttctccctctcatttttaccataacaaatattcaatggaaattgttttt 49068642  T
Q  150 a 150  Q
    |    
T  49068643 a 49068643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 54464899 - 54464808
Alignment:
Q  183 acaaaaaactataactcaaattactatgttttagttttcttaataagtatga-atttgtattttttacttataaattaggacggagggagta 273  Q
    |||||||| ||||  |||||||  |||||||||||||||||||||| | |||  ||| | |||||| ||||||| |||||||||||| ||||    
T  54464899 acaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtgattttttttttttttgcttataatttaggacggaggaagta 54464808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 11054314 - 11054224
Alignment:
Q  183 acaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    |||||||||||||   ||||||  ||| |||||||||||||||||||||||| |||   || ||| ||||||| || ||||||||| ||||    
T  11054314 acaaaaaactatactccaaattcttatattttagttttcttaataagtatgatttttgtttgtttgcttataatttgggacggaggaagta 11054224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 23311639 - 23311508
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaattt 238  Q
    |||||||||||||||||  ||| |||||| || |||  | || ||| ||||||||| ||| |||||  |||||||||||||||||||||| | || ||||    
T  23311639 aattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaactata-ctctaaatttttatgttttagttttcttaataa-tgtg-attt 23311543  T
Q  239 gtattttttacttataaattaggacggagggagta 273  Q
     | |||||| ||||||| || ||||||||||||||    
T  23311542 ttgtttttttcttataatttgggacggagggagta 23311508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 31836997 - 31837087
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||| ||| ||  ||| |||||| ||||||  | ||||||||||||||||   ||| ||  ||||||||||||||||||||||||    
T  31836997 aattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaaactatactccaacttcttatgttttagttttcttaataagt 31837087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 34722720 - 34722622
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaactta 169  Q
    |||||||||||| ||||| |||| |||||  ||||||||| ||||| | |||||  | ||  |||| | ||||||||||||||||| |||| |||||||    
T  34722720 taaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaactta 34722622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 48291812 - 48291870
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttatttt 116  Q
    ||||||||||||| ||||||||||| ||| |||||| |||||| |||| |||| |||||    
T  48291812 atcttttccaaaggaaaattaaatggaaagtgcattcaatttgctctctttttcatttt 48291870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 6438092 - 6438177
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||||| |||||  | ||  |||| | |||||||||||||||||    
T  6438092 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 6438177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 20847383 - 20847279
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctttttatgaaactta 169  Q
    |||||||||||||||||| |||| ||||| | |||  ||| ||||||| |||||| |||||  |||| | ||||||||  |||||||  |||||||||||    
T  20847383 taaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaatta-ccaatgaaaattgtttgcacatcttcctatgaaactta 20847285  T
Q  170 ttccaa 175  Q
    ||||||    
T  20847284 ttccaa 20847279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 273
Target Start/End: Original strand, 23514559 - 23514646
Alignment:
Q  187 aaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtattttttacttataaattaggacggagggagta 273  Q
    |||| |||| ||||||| | || || |||||||||||||||| | ||||||  ||| |||||| ||||||||||| |||||||||||||    
T  23514559 aaaattatacctcaaatcaataagtgttagttttcttaataaatgtgaattaatgt-ttttttgcttataaattaagacggagggagta 23514646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 23910492 - 23910424
Alignment:
Q  207 tatgttttagttttcttaataagtatgaatttgta--ttttttacttataaattaggacggagggagta 273  Q
    ||||||||| |||||||||||||| ||| ||| ||  |||||| ||||||| |||||||||| ||||||    
T  23910492 tatgttttaattttcttaataagtgtgattttttatttttttttcttataatttaggacggaaggagta 23910424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 27875930 - 27875849
Alignment:
Q  186 aaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggag 267  Q
    ||||||||||   |||| ||| |||||||||||||||||| |||| ||||  | ||||||||  |||||| |||||||||||    
T  27875930 aaaaactatactacaaactacaatgttttagttttcttaacaagtgtgaaaatatattttttgtttataatttaggacggag 27875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 30189649 - 30189782
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||||||  ||| |||||| || |||  | || |||||||||||||   ||||||  ||||||||| |||| ||||||||| ||| |||     
T  30189649 aattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttaatttttttaataagtgtgattttt 30189748  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
      |||||| ||||||| ||   ||||||||||||    
T  30189749 gtttttttgcttataatttgaaacggagggagta 30189782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 579124 - 579084
Alignment:
Q  207 tatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
    |||||||||||||||||||||||| ||| ||| ||||||||    
T  579124 tatgttttagttttcttaataagtgtgattttttatttttt 579084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 41476382 - 41476266
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgtttt-agttttcttaataagtatgaattt 238  Q
    |||| ||||||||||||| ||| |||||| || |||  | || |||||||||||||   ||||||  |||||||| |||||||||||||||| ||| |||    
T  41476382 aattatttttacatctttctataaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatgtttttagttttcttaataagtgtgatttt 41476283  T
Q  239 gtattttttacttataa 255  Q
     | ||| || |||||||    
T  41476282 ttttttgttgcttataa 41476266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 49583955 - 49584015
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    ||||||||||||| ||||||||||| ||| |||||| |||||| |||  |||| |||||||    
T  49583955 atcttttccaaagaaaaattaaatgtaaagtgcattcaatttgctctgtttttcattttct 49584015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 54725731 - 54725671
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    ||||||| ||||  |||||||||| |||| |||||| |||||| |||| ||||||||||||    
T  54725731 atctttttcaaaagaaaattaaatacaaagtgcattcaatttgctctcttttttattttct 54725671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 9e-65; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 57 - 274
Target Start/End: Original strand, 42365024 - 42365241
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  42365024 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 42365123  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||||||| ||||| |||||||| | || ||||||| |||| || |||||||||||||||| |||||||| || |||||||||||||||    
T  42365124 tccatgaaacttattccaataagaacacaaaaaattgtacctcaaatcactaagtattagttttcttaataaatatgaattagtgttttttacttataaa 42365223  T
Q  257 ttaggacggagggagtac 274  Q
    |||| |||||||||||||    
T  42365224 ttagaacggagggagtac 42365241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 57 - 275
Target Start/End: Complemental strand, 8541734 - 8541516
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  8541734 catcttttccaatgtaaaattaaatgcaaattgcattaaatttgttctccattttattttctccataatttttaaccaatgagaattatttttacatctt 8541635  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  | ||||||||||||||||||||||||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||| ||||||||    
T  8541634 tccaagaaacttattccaagaagaatacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaa 8541535  T
Q  257 ttaggacggagggagtaca 275  Q
    |||||||||||||| ||||    
T  8541534 ttaggacggagggaataca 8541516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 20914848 - 20915064
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  20914848 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 20914947  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| || |||| |||| || |||||||||||||||||| |||||| ||||||||| ||||||||    
T  20914948 tccatgaaacttattccaaggagaacacaaaaaattatatcttaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaa 20915047  T
Q  257 ttaggacggagggagta 273  Q
    |||| || |||||||||    
T  20915048 ttagcacagagggagta 20915064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 62 - 273
Target Start/End: Original strand, 24439566 - 24439777
Alignment:
Q  62 tttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttat 161  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||  |||| | ||||||||||||||||||  ||    
T  24439566 tttccaaagtaaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctttccat 24439665  T
Q  162 gaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattagg 261  Q
    ||||||||||||||||| || |||||||| |||| |||||||||  ||||||||  ||| ||||||||| |||| |||| |||||| |||||||||||||    
T  24439666 gaaacttattccaagaataacacaaaaaattatatctcaaattataatgttttaacttttttaataagtgtgaaattgtgttttttgcttataaattagg 24439765  T
Q  262 acggagggagta 273  Q
    |||||| |||||    
T  24439766 acggagtgagta 24439777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 31690790 - 31690574
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  31690790 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctt 31690691  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    | ||| ||||| ||||||||||||| |||||||| |||| ||||||| |||| || ||| |||||||||||||| |||||| ||||||||| ||||||||    
T  31690690 tctataaaactcattccaagaagaacacaaaaaattatacctcaaatcactaagtattaattttcttaataagtgtgaattagtattttttgcttataaa 31690591  T
Q  257 ttaggacggagggagta 273  Q
    ||| |||||| ||||||    
T  31690590 ttaagacggaaggagta 31690574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 31316971 - 31316755
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  31316971 catctttttcaatgtaaaattaaatgcaagttgcatttaatctgttcacctttttattttctccataatttttaaccaatgagaattatttttacatctt 31316872  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||| | |||||| || |||||| ||||||||    
T  31316871 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataactgtgaattagtgttttttgcttataaa 31316772  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  31316771 ttaggacggagggagta 31316755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 57 - 276
Target Start/End: Complemental strand, 8146183 - 8145964
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||  |||   ||| |||||| ||||||||||||    
T  8146183 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcttttttattttctccataatttttaactaatgagaattatttttacatctt 8146084  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| |||||||| |||| ||||||| |||  || |||||||||||||||||| ||||||  | |||||| ||||||||    
T  8146083 tccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactgagtgttagttttcttaataagtgtgaattaatgttttttgcttataaa 8145984  T
Q  257 ttaggacggagggagtacat 276  Q
    ||||||||||||||||||||    
T  8145983 ttaggacggagggagtacat 8145964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 16286252 - 16286037
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||    
T  16286252 atctttttcaatgtaaaattaaatgcaagttgcatttagtttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 16286153  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaat 257  Q
    | ||||||||||||||||  |||| |||||||| |||| ||||||| |||| || ||| |||||||||||||| ||||||  | ||||||||||||||||    
T  16286152 tcatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaattaatgttttttacttataaat 16286053  T
Q  258 taggacggagggagta 273  Q
    ||||||||||| ||||    
T  16286052 taggacggaggaagta 16286037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 24432570 - 24432354
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  24432570 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttatcctttttattttctccataatttttaaccaatgagaattatttttacatctt 24432471  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | ||||||  |||||||    
T  24432470 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatctttttttattataaa 24432371  T
Q  257 ttaggacggagggagta 273  Q
    ||| |||||||| ||||    
T  24432370 ttaagacggaggaagta 24432354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 13146718 - 13146934
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||||| ||||| |||||| ||||||  |||  |||| |||||| ||||||||||||    
T  13146718 catcttttccaatgtaaaattaaatgtaaattgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattatttttacatctt 13146817  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  || |||||||||||||  |||| |||||||| |||| ||||||| |||| || ||||||||| ||||||||||||||| ||||||||| ||||||||    
T  13146818 tccataaaacttattccaaagagaacacaaaaaattatacctcaaatcactaagtgttagttttcataataagtatgaattagtattttttgcttataaa 13146917  T
Q  257 ttaggacggagggagta 273  Q
    |||| ||||| ||||||    
T  13146918 ttagaacggatggagta 13146934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 35462888 - 35462673
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| ||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||  |||  |||| |||||| ||||||||||||    
T  35462888 catctttttcaatgtaaaattaaatgcaaatttcattcaatttattatcctttttattttcttcataatttttaaccaatgagaattatttttacatctt 35462789  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||| |||||| |||| |||||||| |||| ||||||| | || || |||||||||||||||||| |||||| || |||||| ||||||||    
T  35462788 tccatgaaactta-tccaaggagaaaacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 35462690  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  35462689 ttaggacggagggagta 35462673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 25962622 - 25962402
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaat----tgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttaca 152  Q
    |||||||| ||| |||||||||||||||| |    ||||||||||||||||| ||||||||||||| ||||||  |||  |||| |||||| ||||||||    
T  25962622 catctttttcaatgtaaaattaaatgcaagtcatttgcatttaatttgttctactttttattttctccataatttttaaccaatgagaattatttttaca 25962523  T
Q  153 tctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttactta 252  Q
    |||||  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||| ||||    
T  25962522 tctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattattcttttttgctta 25962423  T
Q  253 taaattaggacggagggagta 273  Q
    |||||||||||||||||||||    
T  25962422 taaattaggacggagggagta 25962402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 37066392 - 37066213
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||    
T  37066392 atcttttccaatgtaaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 37066293  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt 237  Q
      | ||||||||||||||||||||||||||||| |||| ||||||| | || || |||||||||||||||||| ||||||    
T  37066292 ccacgaaacttattccaagaagaatacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 37066213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 2002310 - 2002096
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||| |||||| ||||  |||||||||||||||||    
T  2002310 aaaaaatcatcttttccaaaataaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaattgttttt 2002211  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttac 249  Q
    ||||||||  || |||||||||  ||||| || ||||||   ||||  ||||  |||||| |||| ||||||||||||||| ||||||||| |||||| |    
T  2002210 acatctttccataaaacttattttaagaaaaacacaaaat--tatacttcaagctactatatttttgttttcttaataagtgtgaatttgtgtttttttc 2002113  T
Q  250 ttataaattaggacgga 266  Q
    ||||||||| |||||||    
T  2002112 ttataaattgggacgga 2002096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 12638882 - 12639093
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  |    
T  12638882 tttttcaatgtaaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 12638981  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    | ||| |||||||||| |||| |||||||| |||| ||||||| ||||  | |||||||||||||||||| |||||| || |||||| ||||||||||||    
T  12638982 taaaatttattccaaggagaacacaaaaaattatacctcaaataactaaatgttagttttcttaataagtgtgaattagtgtttttt-cttataaattag 12639080  T
Q  261 gacggagggagta 273  Q
    |||||||| ||||    
T  12639081 gacggaggaagta 12639093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 59 - 273
Target Start/End: Original strand, 8143925 - 8144139
Alignment:
Q  59 tcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttt 158  Q
    |||||| ||||||||||||||||  |||||||||| |||||||||| | ||||||||||| |||||| ||||  |||| ||||||  |||||| |||||     
T  8143925 tctttttcaaagtaaaattaaatataaattgcattcaatttgttctacattttattttctccataatcattaaccaatgagaattcgttttacttctttc 8144024  T
Q  159 tatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaatt 258  Q
    |||||||||||||||||||| ||||||||||  |||| ||||||||| ||||||||| |||||||||||||| |  |||  |  ||||| ||||||||||    
T  8144025 tatgaaacttattccaagaaaaatacaaaaatttatacctcaaattaatatgttttatttttcttaataagtgtacattgatggttttttcttataaatt 8144124  T
Q  259 aggacggagggagta 273  Q
    |||||||| ||||||    
T  8144125 aggacggatggagta 8144139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 30086718 - 30086500
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||  |||  |||| |||||| ||||||| ||||    
T  30086718 catcttttccaatgtaaaattaaatacaaattgcattcaatttattctcctttttattttctccataatttttagccaatgagaattatttttacttctt 30086619  T
Q  157 tttatgaaacttattccaagaagaatac-aaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtattttttacttat 253  Q
    |  |||||||||||| |||| |||| || |||||| |||| ||||||||||||  | |||||||||||||||||| ||||||  ||| |||||| |||||    
T  30086618 tccatgaaacttatttcaaggagaacacgaaaaaattatacctcaaattactaaatgttagttttcttaataagtgtgaattaatgt-ttttttgcttat 30086520  T
Q  254 aaattaggacggagggagta 273  Q
    ||||||| ||||||||||||    
T  30086519 aaattagaacggagggagta 30086500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 36414003 - 36413890
Alignment:
Q  160 atgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaatta 259  Q
    |||||||||||||||| || || |||||||| |||| |||||| ||||||||||| ||||||||||||||| ||||||||| ||||||  ||||||||||    
T  36414003 atgaaacttattccaataaaaacacaaaaaattatatctcaaactactatgtttttgttttcttaataagtgtgaatttgtgttttttgtttataaatta 36413904  T
Q  260 ggacggagggagta 273  Q
    ||||||||||||||    
T  36413903 ggacggagggagta 36413890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 42273654 - 42273852
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    ||||||||||||||||||||||| |||||  ||||  ||| ||||||| |||||  | ||  |||| | ||||||||||||||||| |||| |||||| |    
T  42273654 taaaattaaatgcaaattgcattcaattttctctc--tttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 42273751  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    |||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| |||  || | |||||| ||||||| || |||||||||||    
T  42273752 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga--tttttttttttgcttataatttgggacggaggga 42273849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 25840871 - 25841071
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| ||||||||||  ||||  ||||||||| | |||||  | |  ||||| | |||||||||||||||||   |||||||||||||    
T  25840871 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccatgaaacttattc 25840970  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||  | || ||||||||||||    ||||||  |||| ||||||||||||||||||| ||| |||   |||||| ||||||| |||||||| |||||||    
T  25840971 caaagaaaacacaaaaaactatgctacaaatttttatgctttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacgaagggagt 25841070  T
Q  273 a 273  Q
    |    
T  25841071 a 25841071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 59 - 230
Target Start/End: Original strand, 32079498 - 32079668
Alignment:
Q  59 tcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttt 158  Q
    ||||||| ||| | ||||||||||||||||||||||||||| | |||| | | |||||||   |||||| || || || | ||||||||||||||||||     
T  32079498 tcttttctaaactgaaattaaatgcaaattgcatttaatttct-ctccctctcattttctctgtaataaataatcgatgaaaattgtttttacatctttc 32079596  T
Q  159 tatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
     || ||||| ||| |||| |||| | ||||||||||||  |||||||  |||||||||||||||||||||||    
T  32079597 cattaaactaatttcaaggagaacataaaaaactataatccaaattataatgttttagttttcttaataagt 32079668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 17825364 - 17825249
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| ||||||||||||||||||| |||| ||||||| |||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||       
T  17825364 tttttcaatgtaaaattaaatgcaaattacattcaatttgtcctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccc 17825265  T
Q  161 tgaaacttattccaag 176  Q
    | ||||||||||||||    
T  17825264 tcaaacttattccaag 17825249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 140 - 277
Target Start/End: Complemental strand, 37562849 - 37562714
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaat-acaaaaaactataactcaaattactatgttttagttttcttaataagtatgaattt 238  Q
    |||||||||||||||||  ||| |||||| |||||| || ||  |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||    
T  37562849 aattgtttttacatcttcctataaaactttttccaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttt 37562750  T
Q  239 gtattttttacttataaattaggacggagggagtacata 277  Q
       |||||| ||||||| || ||||||||||||||||||    
T  37562749 ---ttttttgcttataatttgggacggagggagtacata 37562714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 12912460 - 12912290
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||||| ||||||||||||||| ||||||||||||| ||||  ||| ||||| |  | ||  | ||  |||| | |||||||||||||||||  ||    
T  12912460 tttttcaaagaaaaattaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttccta 12912361  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtat 232  Q
    | ||||||||| |||  | || |||||||||||||  || || |||||||||||||||||||||||||||||    
T  12912360 taaaacttatttcaaagataacacaaaaaactatat-tccaactactatgttttagttttcttaataagtat 12912290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 8506429 - 8506634
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||   ||| |||||||  ||||        |||| | ||||||||||||||||||    
T  8506429 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctatctttcattttctcaataacc------caatgaaaattgtttttacatcttt 8506522  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaat 257  Q
     ||| ||||||||| |||| | || | || |||||||    |||| ||||||||||||||||||||||||||| | |||||   |||||| |||||||      
T  8506523 ctataaaacttatttcaaggataacataagaaactatgttgcaaactactatgttttagttttcttaataagtgt-aattt---ttttttccttataata 8506618  T
Q  258 taggacggagggagta 273  Q
    | ||||||||||||||    
T  8506619 tgggacggagggagta 8506634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 20644088 - 20644222
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga-attt 238  Q
    |||||||||||||||||  ||| |||||| ||||||  | || |||||||| ||||   ||||||  |||||||||||||||||||||||| |||  |||    
T  20644088 aattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgattttt 20644187  T
Q  239 gtattttttacttataaattaggacggagggagta 273  Q
     | |||||| ||||||| || ||||||||||||||    
T  20644188 tttttttttgcttataatttgggacggagggagta 20644222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 247
Target Start/End: Original strand, 20039107 - 20039283
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaac-tta 169  Q
    |||||||||||||||||| ||||||||||  | ||  ||| ||||| |||||||  | ||  |||||| ||||| |||||||||||  ||| |||| ||     
T  20039107 taaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctataaaaccttt 20039206  T
Q  170 ttccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
    ||| ||||| || |||||||| ||||   ||||||  |||||||||||||||||||||||| ||||||| | ||||||    
T  20039207 ttcaaagaa-aacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgaatttttttttttt 20039283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 268
Target Start/End: Complemental strand, 43590118 - 43589921
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | ||||||||||||||||   ||| |||||| |    
T  43590118 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 43590019  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagg 268  Q
    || ||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| ||||||||||||    
T  43590018 tcaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacggagg 43589921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 20452530 - 20452467
Alignment:
Q  133 caataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataa 196  Q
    ||||||||||| ||||||| ||||| |||||||||||||| ||||||||| ||||||| |||||    
T  20452530 caataagaattatttttacttctttctatgaaacttattcgaagaagaatgcaaaaaattataa 20452467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 34425336 - 34425494
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    ||||||||||||||||||  ||| |||||  ||||  ||||||||| | |||||| | ||  |||| | |||||||||||||| ||  ||| |||||| |    
T  34425336 taaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatattcctataaaactttt 34425434  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    | |||  | || |||||||||||||  |||||||  ||||||||||||||||||||||||    
T  34425435 ttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagt 34425494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 37522676 - 37522592
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttctta 224  Q
    |||||||||||||||||  ||| |||||| |||||| || || |||||||||||||   ||||||  ||||||||||||||||||    
T  37522676 aattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttctta 37522592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 12792830 - 12792741
Alignment:
Q  183 acaaaaaactataactcaaattact-atgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    ||||||||||||| ||| |||| || ||||||||||||| ||||||||| ||| ||| | |||||| ||||||| |||||||||||||||||    
T  12792830 acaaaaaactata-ctccaatttcttatgttttagtttttttaataagtgtgatttttt-ttttttgcttataatttaggacggagggagta 12792741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 277
Target Start/End: Original strand, 30703739 - 30703809
Alignment:
Q  204 tactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagtacata 277  Q
    ||||||||||||||||| ||||||||||||| |||   |||||| |||||||  | ||||||||||||||||||    
T  30703739 tactatgttttagttttgttaataagtatgatttt---ttttttgcttataatatgggacggagggagtacata 30703809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 264
Target Start/End: Complemental strand, 30893344 - 30893214
Alignment:
Q  133 caataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtat 232  Q
    |||||| |||| |||||||||||||  || ||| | |||| ||||| || |||| ||||||||   |||||||  ||||||||||||||||||||||| |    
T  30893344 caataaaaattatttttacatctttccataaaattaattctaagaaaaacacaagaaactatactccaaattatcatgttttagttttcttaataagtgt 30893245  T
Q  233 gaatttgtattttttacttataaattaggacg 264  Q
    ||| |  | |||||||||||||| || |||||    
T  30893244 gaaataat-ttttttacttataatttgggacg 30893214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 234
Target Start/End: Complemental strand, 16153514 - 16153338
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| |||||||||| |||| ||||||||||||| |||| |||| | |||||  ||||| || ||  |||| | || ||||||||||||||    
T  16153514 atcttttccaaaggaaaattaaatacaaagtgcatttaatttgctctctttttcactttctctataatcaacta-ccaatga-aaatgtttttacatctt 16153417  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttag-ttttcttaataagtatga 234  Q
      ||| ||||||||| |||  | || ||||||||||||    |||| || |||||||||| |||| |||||||||||||    
T  16153416 cctataaaacttatttcaaagataacacaaaaaactatgttacaaactattatgttttagttttttttaataagtatga 16153338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 9957454 - 9957390
Alignment:
Q  208 atgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    ||||||||||||||||||||||| || |||| | |||||||||||||| || |||| |||||||||    
T  9957454 atgttttagttttcttaataagtgtg-attttttttttttacttataatttgggacagagggagta 9957390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 6391861 - 6391997
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    |||||||||||||  ||||||| ||||||||||||||| | |  | ||  ||| |||||||  ||||  | ||  |||||| | ||||||||||||||||    
T  6391861 atcttttccaaagagaaattaattgcaaattgcatttattatactttctctttcattttctctataactaataaccaataaaagttgtttttacatcttt 6391960  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactat 194  Q
     ||||||||||||| |||  |  ||||||||||||||    
T  6391961 ctatgaaacttatttcaaagatgatacaaaaaactat 6391997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 8959632 - 8959767
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||| ||| ||| || |||||| |||| |||  |||||||  ||||| || || ||||| | |||||||||||||||||    
T  8959632 atcttttccaaagaaaaattaaatgtaaagtgcgttcaatttgctctcttttccattttctctataatcaacta-tcaatgaaaattgtttttacatctt 8959730  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaacta 193  Q
      ||| ||||||||| |||  | || |||||||||||    
T  8959731 cctataaaacttatttcaaagataacacaaaaaacta 8959767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 230
Target Start/End: Complemental strand, 43454476 - 43454320
Alignment:
Q  74 aattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattcc 173  Q
    ||||||||| ||||| |||| |||||  ||||  ||||||||||||| |||  | || | ||| | |||||||||||||| ||  ||| ||||||||  |    
T  43454476 aattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcctataaaacttatgac 43454377  T
Q  174 aagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    ||  | || |||||||||||||  |||| ||  ||||||||| ||||||||||||||    
T  43454376 aaagaaaacacaaaaaactatatttcaagttcttatgttttaattttcttaataagt 43454320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 6686389 - 6686592
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  6686389 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 6686488  T
Q  171 t-ccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggg 269  Q
    | ||||  | || |||||||||||||   ||||||  |||||||||||||||||||||| | ||| |||   |||||| ||||||| || | ||||| ||    
T  6686489 ttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatttttgtttttttgcttataatttggaacggaagg 6686588  T
Q  270 agta 273  Q
    ||||    
T  6686589 agta 6686592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 278
Target Start/End: Complemental strand, 11262040 - 11261834
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  11262040 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 11261941  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    | |||  | || |||||||| ||||   ||||||   |||| ||||||| |||||||||| || |||| | |||||| ||||||| |||||||||| |||    
T  11261940 ttcaaagaaaacacaaaaaattatactccaaattctcatgtgttagtttacttaataagtgtg-attttttttttttgcttataatttaggacggaagga 11261842  T
Q  271 gtacataa 278  Q
    ||| ||||    
T  11261841 gtaaataa 11261834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 228
Target Start/End: Original strand, 17351395 - 17351550
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||| ||||| |||| |||||  ||||  | | ||||||| |||||| | ||  |||| | ||||||||||||||||||  || ||||||||||    
T  17351395 aaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccataaaacttattc 17351494  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |||  | |||| |||||||||||   ||| ||  || || ||||||||||||||||    
T  17351495 caacgaaaataaaaaaaactatactccaagtttttacgtattagttttcttaataa 17351550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 42072735 - 42072648
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaata 227  Q
    |||| |||||||||||||| | ||||||||||||| | |||| | |||||  ||||| ||||| || ||| |||| ||||||||||||    
T  42072735 aattctttttacatcttttgacgaaacttattccatgtagaagataaaaagttataattcaaaatagtatatttttgttttcttaata 42072648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 1144666 - 1144624
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttg 100  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||    
T  1144666 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 1144624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 29307215 - 29307159
Alignment:
Q  199 caaattactatgttttagttttcttaataagtatgaatttgtattttttacttataa 255  Q
    |||| |||||| ||||||||||||||||||| || ||||| | |||||| |||||||    
T  29307215 caaactactatattttagttttcttaataagcataaattttttttttttgcttataa 29307159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 4e-64; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 11992718 - 11992934
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||  |||  |||| |||||| ||||||||||||    
T  11992718 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttcacctttttcttttctccataatttttaaccaatgagaattatttttacatctt 11992817  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    || ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||| ||| |||||| || |||||||||||||||    
T  11992818 ttcatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaattagtgtgaattagtgttttttacttataaa 11992917  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  11992918 ttaggacggagggagta 11992934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 27621120 - 27621336
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  27621120 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 27621219  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| ||||  |||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  27621220 tccatgaaacttattccaagtagaacacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 27621319  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  27621320 ttaggacggagggagta 27621336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 27752576 - 27752792
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  27752576 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 27752675  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  27752676 tccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 27752775  T
Q  257 ttaggacggagggagta 273  Q
    | |||||||||||||||    
T  27752776 tcaggacggagggagta 27752792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 34713518 - 34713734
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  34713518 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 34713617  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    | ||  ||||||||| |||||| || |||||||| |||| ||||||| |||| || |||||||||||||||| | |||||| |||||||||||||||||     
T  34713618 tctagaaaacttatttcaagaaaaacacaaaaaattatacctcaaatcactaagtattagttttcttaataaatgtgaattagtattttttacttataac 34713717  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  34713718 ttaggacggagggagta 34713734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 35260047 - 35260263
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  35260047 catcttttccaatgtaaaattaaatgcaaattccattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 35260146  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||| |||| ||||||||  ||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  35260147 tccatgaaacttattccaaggagaacacaaaaaatgatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 35260246  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  35260247 ttaggacggagggagta 35260263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 3099943 - 3100159
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  3099943 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 3100042  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  ||||||||||||||||  |||| |||||||| |||| ||||||| | || || |||||||||||||||||| |||||| || |||||| ||||||||    
T  3100043 tccatgaaacttattccaacgagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 3100142  T
Q  257 ttaggacggagggagta 273  Q
    ||| |||||||||||||    
T  3100143 ttaagacggagggagta 3100159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 57 - 274
Target Start/End: Complemental strand, 31133200 - 31132985
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  31133200 catcttttccaatgtaaaattaaatgcaaattgcattcaattttttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 31133101  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||| |||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| |  |||||| ||||||||    
T  31133100 tccatgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattag--ttttttgcttataaa 31133003  T
Q  257 ttaggacggagggagtac 274  Q
    ||||||||||||||||||    
T  31133002 ttaggacggagggagtac 31132985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 13 - 273
Target Start/End: Complemental strand, 2238808 - 2238550
Alignment:
Q  13 aatataagcaaaaaagactaacttttatgnnnnnnnnaaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctccttttta 112  Q
    |||||||||||||||||| ||||| | ||        |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||    
T  2238808 aatataagcaaaaaagaccaacttctgtgttatttcaaaaaaatcatcttttccaaagtaaaattaaatgcaaatcgcattcaatttgttctcctttcta 2238709  T
Q  113 ttttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgtt 212  Q
    ||  || ||| || ||||  |||||| ||||||||||||||||||  ||||||||||||||||||  || ||| |||| |||| |||||| |||||||||    
T  2238708 ttcactccatgattattaaccaataataattgtttttacatctttccatgaaacttattccaaga--aaaacacaaaattatacctcaaactactatgtt 2238611  T
Q  213 ttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    || ||||||||||||||| ||||||||| |||||| ||||||||||  |||||||||||||    
T  2238610 tttgttttcttaataagtgtgaatttgtgttttttgcttataaattgagacggagggagta 2238550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 11044051 - 11044263
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||  |||  |||| |||||| |||||||||||||  |    
T  11044051 ttttccaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgagaattatttttacatctttaca 11044150  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    |||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||||||    
T  11044151 tgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattag 11044250  T
Q  261 gacggagggagta 273  Q
     ||||||||||||    
T  11044251 aacggagggagta 11044263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 44411380 - 44411164
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  44411380 catctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 44411281  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| ||||||||||||| ||||  |||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  44411280 tccatgaaacttatttcaaggagaatacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 44411181  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||| ||||||    
T  44411180 ttaggacggaaggagta 44411164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 57 - 267
Target Start/End: Original strand, 44052611 - 44052821
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  44052611 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 44052710  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |  |||||||||||||| |||| |||||||| |||| ||||||| |||  || |||||||||||||||||| |||||| ||||||||| ||||||||    
T  44052711 tccagaaaacttattccaaggagaacacaaaaaattatacctcaaatcactgagtgttagttttcttaataagtgtgaattagtattttttgcttataaa 44052810  T
Q  257 ttaggacggag 267  Q
    |||||| ||||    
T  44052811 ttaggatggag 44052821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 52 - 266
Target Start/End: Original strand, 41426324 - 41426538
Alignment:
Q  52 aaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttac 151  Q
    |||| |||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||| ||| |||||| ||||  |||||| |||||||| |||    
T  41426324 aaaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttatcctttctattatctccataatcattaaccaataataattgtttatac 41426423  T
Q  152 atctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttactt 251  Q
    ||||||  |||||||||||||||||||||| |||||||| |||| || ||| ||||||||||| ||||| | ||||| | ||||||| | |||||| |||    
T  41426424 atctttccatgaaacttattccaagaagaacacaaaaaattataccttaaactactatgtttttgttttttcaataaatgtgaatttttgttttttgctt 41426523  T
Q  252 ataaattaggacgga 266  Q
    ||||||| |||||||    
T  41426524 ataaattgggacgga 41426538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 37598064 - 37598275
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||| ||||||||  |    
T  37598064 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttt-acatctttcca 37598162  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    ||||||||||| |||| |||| |||||||| |||| ||||||| | || || ||||||||||||||||   |||||| || |||||| ||||||||||||    
T  37598163 tgaaacttatttcaaggagaacacaaaaaattatacctcaaatcagtaagtgttagttttcttaataaccgtgaattagtgttttttgcttataaattag 37598262  T
Q  261 gacggagggagta 273  Q
    |||||||||||||    
T  37598263 gacggagggagta 37598275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 24510873 - 24510652
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||| ||||||||||||  ||||||||||||||||||| |||||||||| ||||||||| | | |||||| ||||  |||||| ||||||||||    
T  24510873 aaaaaatcattttttccaaagtagtattaaatgcaaattgcattcaatttgttctactttttattctatccataatcattaaccaataaaaattgttttt 24510774  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttac 249  Q
    ||||||||  |||||||||||||||| |  || ||| |||| |||| |||||| ||||||||||| ||||| ||||||||| ||||||| | |||||| |    
T  24510773 acatctttccatgaaacttattccaata--aaaacacaaaattatacctcaaactactatgtttttgttttattaataagtgtgaatttatgttttttgc 24510676  T
Q  250 ttataaattaggacggagggagta 273  Q
    ||||||||| ||| ||||||||||    
T  24510675 ttataaattgggatggagggagta 24510652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 25321757 - 25321541
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||  |||  | || | |||| ||||||||||||    
T  25321757 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgctctcctttttattttctccataatttttaacctatgaaaattatttttacatctt 25321658  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  || |||||||||||||| |||| ||| |||| |||| ||||||| || |  | |||||||||| ||||||| |||||| || |||||| ||||||||    
T  25321657 tccataaaacttattccaaggagaacacagaaaattatacctcaaatcaccaaatgttagttttctaaataagtgtgaattagtgttttttgcttataaa 25321558  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  25321557 ttaggacggagggagta 25321541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 35344361 - 35344574
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| |||||||||||||||||||||||| ||| | |||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  |    
T  35344361 tttttcaatgtaaaattaaatgcaaattgcattcaatgtattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcca 35344460  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg-tattttttacttataaatta 259  Q
    ||||||||||| |||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| |   |||||| |||||||||||    
T  35344461 tgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagagtttttttgcttataaatta 35344560  T
Q  260 ggacggagggagta 273  Q
    ||||| ||||||||    
T  35344561 ggacgtagggagta 35344574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 57 - 275
Target Start/End: Original strand, 39187223 - 39187438
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| | |||| ||||||||||||    
T  39187223 catcatttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctt 39187322  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  || |||||||||||||  |||| ||   ||| |||| ||||||| |||| || |||||||||||||||||  |||||| || |||||| ||||||||    
T  39187323 tccataaaacttattccaacgagaacac---aaattatacctcaaatcactaagtgttagttttcttaataagcgtgaattagtgttttttgcttataaa 39187419  T
Q  257 ttaggacggagggagtaca 275  Q
    ||| |||||||||||||||    
T  39187420 ttatgacggagggagtaca 39187438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 32678680 - 32678472
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  32678680 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttcttctttttattttctccataatttttaaccaatgagaattatttttacatctt 32678581  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtattttttacttata 254  Q
    |  |||||||||||||||||||||| |||||||| |         || |||| || |||||||||||||||||| ||||||  ||| |||||| ||||||    
T  32678580 tccatgaaacttattccaagaagaacacaaaaaatt---------atcactaagtgttagttttcttaataagtgtgaattaatgt-ttttttgcttata 32678491  T
Q  255 aattaggacggagggagta 273  Q
    |||||||||||||||||||    
T  32678490 aattaggacggagggagta 32678472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 24612651 - 24612432
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||| |    
T  24612651 catctttttcaatgtaaaattaaatgcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcat 24612552  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg---tattttttacttat 253  Q
    |  ||||||||||||||||| |||| | |||||| |||| ||||||| |||| || ||| |||||||||||||| |||||| |   | |||||| |||||    
T  24612551 tccatgaaacttattccaaggagaacataaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaattagtgtttttttttgcttat 24612452  T
Q  254 aaattaggacggagggagta 273  Q
    ||||||| | ||||||||||    
T  24612451 aaattagaatggagggagta 24612432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 57 - 277
Target Start/End: Complemental strand, 35346475 - 35346256
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||| ||| |||||||| ||||||||||||||| ||| | |||||||||||||| ||| ||||||  |||  |||| |||||| ||||||||||||    
T  35346475 catctttttcaatgtaaaattgaatgcaaattgcattcaatgtattctcctttttattatctccataatttttaaccaatgagaattatttttacatctt 35346376  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||| ||||| |||| |||| |||||||| |||| ||||||| ||||  | ||| |||||||||||| | |||||| | | ||||| ||||||||    
T  35346375 tccatgaaatttatttcaaggagaacacaaaaaattatacctcaaatcactaaatattaattttcttaataaatgtgaattag-agttttttcttataaa 35346277  T
Q  257 ttaggacggagggagtacata 277  Q
    |||||||||| ||||||||||    
T  35346276 ttaggacggaaggagtacata 35346256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 57 - 208
Target Start/End: Complemental strand, 37567602 - 37567451
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||  ||| ||||| |||||| ||||| ||||||    
T  37567602 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaatcaatgagaattatttttccatctt 37567503  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattacta 208  Q
    |  ||||||||||||||||  |||| |||||||| |||| ||||||| ||||    
T  37567502 tccatgaaacttattccaaagagaacacaaaaaattatacctcaaatcacta 37567451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 57 - 208
Target Start/End: Complemental strand, 44358662 - 44358511
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| | ||| |||||| ||||||||| ||    
T  44358662 catcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaattaatgagaattatttttacatatt 44358563  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattacta 208  Q
    || || |||||||||| ||| |||| |||||||| |||| || |||| ||||    
T  44358562 ttcataaaacttattctaaggagaacacaaaaaattatacctaaaatcacta 44358511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 57 - 247
Target Start/End: Original strand, 36538048 - 36538238
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| ||| ||  |||  |||| |||||| ||||||||||||    
T  36538048 catcttttccaatgtaaaattaaatgcaatttgcatttaatttattctcctttttattttctccatgatttttaaccaatgagaattatttttacatctt 36538147  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
    |  ||||||||||||| ||  |||| | |||||| |||  ||||||| ||||  | |||||||||||||||| | |||||| || ||||||    
T  36538148 tccatgaaacttattctaaagagaacataaaaaattattcctcaaatcactaaatgttagttttcttaataaatgtgaattagtgtttttt 36538238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 57 - 208
Target Start/End: Complemental strand, 33851194 - 33851043
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||  |||   ||| |||||| ||||||||||||    
T  33851194 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttttcctttttattttctccatgatttttaactaatgagaattatttttacatctt 33851095  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattacta 208  Q
    |  ||||||||||||||||  |||| |||||||| |||  ||||||||||||    
T  33851094 tccatgaaacttattccaaagagaacacaaaaaattattcctcaaattacta 33851043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 27740596 - 27740808
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| || |||||||||| ||||| ||||  ||||| ||| |||| |||||||||||| || | ||  |||| |||||| ||||||||||||    
T  27740596 catcttttccaa-gtcaaattaaatgtaaatttcattcgatttgctcttctttctattttcttcatgatcaatagccaattagaattatttttacatctt 27740694  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |   ||||||||||||    || || |||||||| |||| ||||||||||||||||||| |||| |||||||||||||||||   ||||||||| |||||    
T  27740695 tcagtgaaacttattc---aaaaaacacaaaaaattatatctcaaattactatgttttaatttttttaataagtatgaatttactttttttactcataaa 27740791  T
Q  257 ttaggacggagggagta 273  Q
    ||| |||| ||||||||    
T  27740792 ttaagacgaagggagta 27740808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 230
Target Start/End: Original strand, 34899907 - 34900087
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||| ||||||||||||||||| |||| |||| |||||||| | |||| || ||||| ||| || | ||  |||| | |||| |||||    
T  34899907 aaaaaatcatcttttctaaagtaaaattaaatgctaatttcattcaatttgtttttctttatactttctccatgatcaataaccaatcaaaattattttt 34900006  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    | ||| |  ||| |||||||||| |||| ||| |||||||| |||| | ||||||| ||||||||||||||||||||||||    
T  34900007 aaatcctcctataaaacttattctaagaggaacacaaaaaaatatatcgcaaattattatgttttagttttcttaataagt 34900087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 16643366 - 16643524
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| || |||||  |||||||||||||||||||||| |||| || || || ||||||||||||||| |||||| |||   |||| |||| ||| |||    
T  16643366 aaaaaatcaactttttaaaagtaaaattaaatgcaaattacattcaagttattttcctttttattttctccataatcattgaccaatgagaaatgtattt 16643465  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattacta 208  Q
    ||||||||  || |||||||||||| ||||||||||||||  |||| | ||||||||||    
T  16643466 acatctttccataaaacttattccaggaagaatacaaaaagttataccccaaattacta 16643524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 58 - 228
Target Start/End: Complemental strand, 41362477 - 41362307
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| || | |||| |||||||  ||||| || ||  |||| | |||||||||||||||||    
T  41362477 atcttttccaaaggaaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactac-caatgaaaattgtttttacatctt 41362379  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
      ||| ||||||||| |||  | || ||||||||||||    |||| |||||||||||||||||||||||||    
T  41362378 cctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataa 41362307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 6401692 - 6401782
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    ||||||||||||||||||||| |||||||||| |||||| || |||||||||||||   ||||||||||| |||||| |||||||||||||    
T  6401692 aattgtttttacatctttttaggaaacttatttcaagaataacacaaaaaactatactacaaattactatattttagatttcttaataagt 6401782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 27819641 - 27819811
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| |||||||| ||||| ||||||||||||||| | ||||||||||| ||||| |||||||||||  ||||  | || ||||||| || |||||||    
T  27819641 aaaaaatcatctttttcaaaggaaaattaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataaaaaatgttttt 27819740  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagtttt 220  Q
    |||||||| ||| |||||||||   || | ||||||| |||||||    |||| || ||||||||||||||    
T  27819741 acatctttatataaaacttatttgtaggataatacaagaaactatgttacaaactattatgttttagtttt 27819811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 228
Target Start/End: Original strand, 8745565 - 8745743
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| |||||||| ||||  ||||||||||||||| |   ||||||||| ||||| ||||||||| |  ||||| |  |  |||| | ||||||||||    
T  8745565 aaaaaatcatctttttcaaaagaaaattaaatgcaaactatttttaatttgctctcccttttattttttctataatcaacaaccaatgaaaattgttttt 8745664  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |||||||  ||| ||||||||| |||||| || |||| |||||||    |||| |||||||||||||||||||||||||    
T  8745665 acatcttcctataaaacttatttcaagaataacacaagaaactatgttgcaaactactatgttttagttttcttaataa 8745743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 8712589 - 8712684
Alignment:
Q  133 caataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataact-caaattactatgttttagttttcttaataa 228  Q
    |||||| |||||||||||||||||| ||| ||||||||||||| || || |||| |||||| |||| ||| ||||||||||||||||||||||||||    
T  8712589 caataaaaattgtttttacatctttctataaaacttattccaataataacacaagaaacta-aactgcaagttactatgttttagttttcttaataa 8712684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 71 - 274
Target Start/End: Complemental strand, 34890331 - 34890127
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  34890331 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 34890232  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga-atttgtattttttacttataaattaggacggaggg 269  Q
    |||||  | || |||||||| ||||   ||||||  |||||||||||||||||||||||| |||  ||| | |||||| ||||||| || ||||||||||    
T  34890231 tccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgattttttttttttttgcttataatttgggacggaggg 34890132  T
Q  270 agtac 274  Q
    |||||    
T  34890131 agtac 34890127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 273
Target Start/End: Original strand, 26483534 - 26483736
Alignment:
Q  70 gtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaactta 169  Q
    ||||||||||||| ||||| |||| |||||  |||   ||| ||||| | |||||| | ||  |||| | ||||||||||||||||   ||| ||||||     
T  26483534 gtaaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctataaaacttt 26483633  T
Q  170 ttccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggg 269  Q
    || |||  | || |||||||||||||  |||||||  |||||||||||||||||||||||| || |||| | |||||| ||||||| || ||||||||||    
T  26483634 tttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtg-atttttgtttttttcttataatttgggacggaggg 26483732  T
Q  270 agta 273  Q
    ||||    
T  26483733 agta 26483736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 230
Target Start/End: Complemental strand, 43216504 - 43216345
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||||| |||||  | || | ||| | |||||||||||||||||  ||| |||||| |    
T  43216504 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctataaaactttt 43216405  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    | |||  | || |||||||||||||   ||||||  ||||||||||||||||||||||||    
T  43216404 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 43216345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 7858531 - 7858735
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| | || |||||  ||||  ||| ||||| | |||||| | |  ||||| | |||||||||||||||||  ||| |||||| |    
T  7858531 taaaattaaatgcaaattactttcaattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctataaaactttt 7858630  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttt--tacttataaattaggacggagg 268  Q
    | |||  | || |||||||||||||   ||||||  |||||||||||||||||||||| | ||| ||| | |||||  | ||||||| ||||||||||||    
T  7858631 ttcaaataaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatttttttttttttcttcttataatttaggacggagg 7858730  T
Q  269 gagta 273  Q
    |||||    
T  7858731 gagta 7858735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 255
Target Start/End: Original strand, 36190775 - 36190959
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||||||||| | |||||  | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  36190775 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 36190874  T
Q  171 tccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaatttgtattttttacttataa 255  Q
    | |||  | || ||||||||||||| ||| |||||  ||||||||||||||||||| |||| ||| ||| | ||||||||||||||    
T  36190875 ttcaaagaaaacacaaaaaactata-ctctaaattcttatgttttagttttcttaacaagtgtgatttttttttttttacttataa 36190959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 58 - 244
Target Start/End: Original strand, 17336732 - 17336918
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    |||||||| |||| ||||||||||||||| |||||| |||||| ||||||||| |||| ||  ||||| || ||  |||| | |||||||||||||||||    
T  17336732 atcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaacta-ccaatgaaaattgtttttacatctt 17336830  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattt 244  Q
      ||| ||| ||||| |||  |  | ||||||||||||    |||| |||||| |||||||||||||||||||| ||| ||| |||||    
T  17336831 cctataaaatttatttcaaagatgacacaaaaaactatgttacaaactactatattttagttttcttaataagtgtgattttttattt 17336918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 41086543 - 41086380
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  ||||||||| | ||| |  | ||  |||| | |||||||||||||||||| ||| |||||| |    
T  41086543 taaaattaaatgcaaattacattgaattttctctctgttttattttttccattaccaatagccaatgaaaattgtttttacatctttatataaaactttt 41086444  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga 234  Q
    | |||  | || |||||||||||||| |||||||  |||  ||||||||||||||||| |||||    
T  41086443 ttcaaagaaaacacaaaaaactataattcaaatttttattatttagttttcttaataaatatga 41086380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 273
Target Start/End: Original strand, 12108240 - 12108362
Alignment:
Q  152 atctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgta-ttttttact 250  Q
    ||||||| |||||||||||| |||  | || |||||||| ||||  |||||||||||  | ||||||||||||||||||  |||||  || |||||| ||    
T  12108240 atcttttcatgaaacttatttcaaagataacacaaaaaattatacttcaaattactaaatgttagttttcttaataagtgagaattaatattttttttct 12108339  T
Q  251 tataaattaggacggagggagta 273  Q
    |||||||||| ||||||||||||    
T  12108340 tataaattagaacggagggagta 12108362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 8673371 - 8673507
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||||||||||| | |||| |||||| |||| |||| |||||||  ||||| || ||  |||| | |||||||||||||||||    
T  8673371 atcttttccaaaggaaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaacta-ccaatgaaaattgtttttacatctt 8673469  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactat 194  Q
     |||| ||||||||| |||  | || ||||||||||||    
T  8673470 cttataaaacttatttcaaatataacacaaaaaactat 8673507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 38072235 - 38072368
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    |||||||||||||| ||||||| ||||||| | |||  | || ||||||||||||    |||| ||||||||||||||||||||||||| | ||| |||     
T  38072235 aattgtttttacatttttttataaaacttaattcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataaatgtgattttt 38072334  T
Q  240 tattttttacttataaattaggacggagggagta 273  Q
    | ||| || |||||||  | ||||||||||||||    
T  38072335 tttttctttcttataatatgggacggagggagta 38072368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 5217457 - 5217595
Alignment:
Q  133 caataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtat 232  Q
    |||||| |||||||||||||||||| ||||||||||||| |||| | || |||| ||||||   ||  || ||||||||| ||||||||||||||||| |    
T  5217457 caataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaagaaacta-cgctgcaactactatgttatagttttcttaataagtgt 5217555  T
Q  233 gaatttgtattttttacttataaattaggacggagggagta 273  Q
    | |||| | |||||| |||||||  | ||||||||| ||||    
T  5217556 g-attttttttttttgcttataatatgggacggaggaagta 5217595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 12108163 - 12108227
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat 125  Q
    |||| ||| |||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  12108163 tttttcaatgtaaaattcaatgcaaattgcattcaatttgttttcctttttattttctccataat 12108227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 15824725 - 15824641
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttctta 224  Q
    ||||||||||||||||||  ||||||||||||| ||  | || |||||||||||||  |||||||  ||||||||||||||||||    
T  15824725 aattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttctta 15824641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 37566512 - 37566453
Alignment:
Q  213 ttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||||||| ||||||||| |||||| || |||||| ||||||||||||||||||||||||    
T  37566512 ttagtttttttaataagtgtgaattagtgttttttgcttataaattaggacggagggagt 37566453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 17314820 - 17315009
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    |||||||| |||  |||||||||| |||| |||||| |||||| ||||||||| |||||||  ||||| || ||  |||| | ||||| |||||||| ||    
T  17314820 atcttttctaaaagaaaattaaatccaaagtgcattcaatttgctctccttttcattttctctataatcaactac-caatgaaaattgcttttacatttt 17314918  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
      ||||||| ||||| |||  |  | ||||||| ||||    |||| ||||||||||||||||||||||||||||||| ||| | ||||||    
T  17314919 cgtatgaaatttatttcaaagatgacacaaaaagctatgttacaaactactatgttttagttttcttaataagtatgattttatttttttt 17315009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 58 - 260
Target Start/End: Original strand, 17713213 - 17713415
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||||||||| ||||||||||||||| |||||| ||| || ||||  ||  ||||| |  ||||  | ||  |||| | ||||||||||| |||||     
T  17713213 atcttttccaaaggaaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttc 17713312  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaat 257  Q
     ||| ||||||||| |||| | || |||| |||||||    |||| ||||||||||||||||| ||||||||| ||| ||| | || ||| ||||||| |    
T  17713313 ctataaaacttatttcaaggataacacaagaaactatgttgcaaaatactatgttttagtttttttaataagtgtgatttttttttatttgcttataatt 17713412  T
Q  258 tag 260  Q
    |||    
T  17713413 tag 17713415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 29920356 - 29920266
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    |||||||||||||||||   ||||||||||||||||  | || |||||||| | ||  |||||||  ||||||||||||||||||||||||    
T  29920356 aattgtttttacatcttcccatgaaacttattccaaagataacacaaaaaattgtacttcaaattcttatgttttagttttcttaataagt 29920266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 2628334 - 2628154
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttt 157  Q
    ||||||| ||||| |||||| |||||||| || ||| |||||| ||||  ||| |||||||  ||||  | ||  |||| | |||| ||||||||||||     
T  2628334 atctttttcaaaggaaaatttaatgcaaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttc 2628235  T
Q  158 ttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaattt 238  Q
     ||| |||||||||  ||| | || |||| |||||||    |||| ||||||||||| ||||||||||||||| |||||||    
T  2628234 ctataaaacttattttaaggataacacaagaaactatgttgcaaactactatgttttggttttcttaataagtgtgaattt 2628154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 25195216 - 25195156
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| |||| |||| |||||||    
T  25195216 atcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctctctttttcattttct 25195156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 40486625 - 40486517
Alignment:
Q  95 aatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactat 194  Q
    ||||| |||| ||||||||||||| | ||||  |||   ||||| |||| |||||||||||||   |||||||||||| ||| ||||||||||||| |||    
T  40486625 aatttattcttctttttattttctccttaatttttaactaataaaaattatttttacatctttccttgaaacttattctaaggagaatacaaaaaattat 40486526  T
Q  195 aactcaaat 203  Q
    | |||||||    
T  40486525 acctcaaat 40486517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 41791638 - 41791570
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    |||||| |||||||||||||  ||||||||||| ||| |||||| |||||| |||| ||||||||||||    
T  41791638 aaaaaatcatcttttccaaaagaaaattaaatgtaaaatgcattcaatttgctctcttttttattttct 41791570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 273
Target Start/End: Original strand, 8711881 - 8712074
Alignment:
Q  72 aaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttatt 171  Q
    ||||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||  | ||  |||| | |||| ||||||||||||  ||| |||||| ||    
T  8711881 aaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaacttttt 8711980  T
Q  172 ccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggag 271  Q
    |||| || || |||||||||||||   |||||    ||||||||||||| ||||||||| |||   ||| |||||| ||||||| || ||||||||||||    
T  8711981 ccaaaaa-aacacaaaaaactatactccaaat----atgttttagtttttttaataagtgtga---tgtttttttttcttataatttgggacggagggag 8712072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 13144034 - 13143903
Alignment:
Q  140 aattgtttttacatctttttatgaaacttatt--ccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt 237  Q
    |||||||||||||||||  ||| |||||| ||  | ||||| || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| ||    
T  13144034 aattgtttttacatcttcctataaaactttttttcaaagaa-aacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt 13143936  T
Q  238 tgtattttttacttataaattaggacggagggagta 273  Q
    |   |||| | ||||||| || ||||||||||||||    
T  13143935 t---ttttcttcttataatttgggacggagggagta 13143903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 16358227 - 16358110
Alignment:
Q  112 attttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgt 211  Q
    ||||| |||||||| | || ||||| | ||||| |||||||||||  |||||||||| ||| ||||| || | |||||||||||  |||||||  ||| |    
T  16358227 atttttttcataatcaatagtcaatgaaaattgattttacatcttcctatgaaactttttcaaagaa-aacaaaaaaaactatacttcaaatttttatat 16358129  T
Q  212 tttagttttcttaataagt 230  Q
    |||| ||||||||||||||    
T  16358128 tttaattttcttaataagt 16358110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 16635426 - 16635488
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctccttttta 112  Q
    |||||| ||||||||| ||||||||||| ||| ||||||||||| || ||||| |||||||||    
T  16635426 aaaaaatcatcttttcaaaagtaaaatttaattcaaattgcattcaagttgttttccttttta 16635488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 16635694 - 16635756
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctccttttta 112  Q
    |||||| ||||||||| ||||||||||| ||| ||||||||||| || ||||| |||||||||    
T  16635694 aaaaaatcatcttttcaaaagtaaaatttaattcaaattgcattcaagttgttttccttttta 16635756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 29147393 - 29147294
Alignment:
Q  72 aaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttatt 171  Q
    ||||||||||||||| ||||||||||||| ||||| ||| |||||||  ||||| |  |   ||| | |||||||||| |||||| |||| |||||||||    
T  29147393 aaaattaaatgcaaactgcatttaatttgatctccatttcattttctctataatcaacaactaatgaaaattgtttttccatcttcttattaaacttatt 29147294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 16635558 - 16635620
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctccttttta 112  Q
    |||||| ||||||||| ||||||||||| ||| |||||| |||| || ||||| |||||||||    
T  16635558 aaaaaatcatcttttcaaaagtaaaatttaattcaaatttcattcaagttgttttccttttta 16635620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 100
Target Start/End: Complemental strand, 17749723 - 17749693
Alignment:
Q  70 gtaaaattaaatgcaaattgcatttaatttg 100  Q
    |||||||||||||||||||||||||||||||    
T  17749723 gtaaaattaaatgcaaattgcatttaatttg 17749693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 276
Target Start/End: Original strand, 2052978 - 2053071
Alignment:
Q  183 acaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagtacat 276  Q
    |||||||| ||||  || ||||| |||||||||||||||||||||||| ||| ||    |||||| |||| || || ||||||| |||||||||    
T  2052978 acaaaaaattatacttctaattattatgttttagttttcttaataagtgtgatttaagtttttttgcttacaatttgggacggatggagtacat 2053071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 8709941 - 8709775
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  ||||  || |||||||| ||||| |  || ||||| | || ||||||||| ||||   |||| ||||||    
T  8709941 taaaattaaatgcaaattacattcaattttctctc--ttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccatgagacttat 8709844  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttg 239  Q
    | |||  | || |||||||||||||   ||||||  |||||||||||||| ||| ||||| ||| ||||    
T  8709843 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagtttttttattaagtgtgattttg 8709775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 34158448 - 34158363
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||||||||| |||| |||||  ||||  |||| |||| |||||||  | || ||||| | |||||||||||||||||    
T  34158448 taaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatctt 34158363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 24892956 - 24893044
Alignment:
Q  183 acaaaaaactataactc-aaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    ||||||||||||| ||| |||||  ||||||| |||||||||||||||| ||  ||| | |||||| ||||||| || ||||||||||||||    
T  24892956 acaaaaaactata-ctctaaattcttatgtttaagttttcttaataagtgtg--ttttttttttttgcttataatttgggacggagggagta 24893044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 35456181 - 35456038
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||| ||||| |||| | |||  ||||  ||||||||| | |||||| | ||  |||| | |||||||||||||||||| ||| |||||| |    
T  35456181 taaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttctataaaactt-t 35456083  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgtttta 215  Q
    | ||| || || | |||||||||||  |||||||  |||||||||    
T  35456082 ttcaaaaaaaacataaaaaactatacttcaaattcttatgtttta 35456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 30766437 - 30766649
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||   ||| |||||| |||||||||||||  |    
T  30766437 tttttcaatgtaaaattaaatgcaaattgcattgaatttgttctcctttttattttctccataatttttaactaatgagaattatttttacatctttcca 30766536  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    |||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  30766537 tgaaacttattccaaggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaattag 30766636  T
Q  261 gacggagggagta 273  Q
    |||| ||||||||    
T  30766637 gacgaagggagta 30766649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 10227899 - 10228115
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  |||  |||| |||||| ||||||||||||    
T  10227899 catcttttccaatataaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 10227998  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| || ||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| ||||||||    
T  10227999 tcgatgaaacttatttcaaggagaacactaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 10228098  T
Q  257 ttaggacggagggagta 273  Q
    |||||||||||||||||    
T  10228099 ttaggacggagggagta 10228115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 61 - 273
Target Start/End: Complemental strand, 17721975 - 17721763
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||   ||| |||||| ||||||||| |||  |    
T  17721975 ttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacaaatgagaattatttttacatgtttcca 17721876  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    |||||||||||||||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||| ||||||||||||    
T  17721875 tgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtattagttttcttaataagtgtgaattaatgttttttgcttataaattag 17721776  T
Q  261 gacggagggagta 273  Q
    |||||||||||||    
T  17721775 gacggagggagta 17721763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 30949122 - 30949338
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||  |||  |||| |||||| ||||||||||||    
T  30949122 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcctttttattttctctataatttttaaccaatgagaattatttttacatctt 30949221  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaa 256  Q
    |  |||||||||||| |||| |||| |||||||| |||| ||||||| | ||  | |||||||| ||||||||| |||||| ||||||||| ||||||||    
T  30949222 tccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcaataaatgttagttttgttaataagtgtgaattagtattttttgcttataaa 30949321  T
Q  257 ttaggacggagggagta 273  Q
    |||||| ||||||||||    
T  30949322 ttaggatggagggagta 30949338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 61 - 274
Target Start/End: Original strand, 374090 - 374303
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||  |||  |||| | |||| ||| |||||||||  |    
T  374090 ttttccgatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctctataatttttaaccaatgaaaattatttatacatctttcca 374189  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    |||||||||||| ||| |||| |||||||| |||| ||||||| |||| || |||||||| ||||||| | |||||| || |||||| ||||||||||||    
T  374190 tgaaacttattctaaggagaacacaaaaaattatacctcaaataactaagtattagtttttttaataaatgtgaattagtgttttttgcttataaattag 374289  T
Q  261 gacggagggagtac 274  Q
    ||||||||||||||    
T  374290 gacggagggagtac 374303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 12278697 - 12278909
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||  |||| |||||| |||||||| ||||  |    
T  12278697 ttttcaaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacaactttcca 12278796  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattag 260  Q
    |||||||||||| ||| |||| |||||||| |||| ||||||| |||| || |||||||||||||||||| ||||||  | |||||| |||||||||||     
T  12278797 tgaaacttattctaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattgatgttttttgcttataaattaa 12278896  T
Q  261 gacggagggagta 273  Q
    |||| || |||||    
T  12278897 gacgaagtgagta 12278909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 258
Target Start/End: Complemental strand, 32882907 - 32882660
Alignment:
Q  13 aatataagcaaaaaagactaacttttatgnnnnnnnnaaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctccttttta 112  Q
    |||||||||||||||||| ||||||| ||        |||||  ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||    
T  32882907 aatataagcaaaaaagaccaacttttgtgttatttcaaaaaagtcatcttttccaaagtaaaattaaatgcaaatcgcattcaatttgttctcctttcta 32882808  T
Q  113 ttttcttcataataattattc--aataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatg 210  Q
    ||  ||  ||||| |||||    ||| ||||||||||||||||||||  ||||||||||||  | |||||| |||||||| |||| |||||| ||| |||    
T  32882807 ttccctctataattattataactaatgagaattgtttttacatctttccatgaaacttattttatgaagaacacaaaaaattatacctcaaactacaatg 32882708  T
Q  211 ttttagttttcttaataagtatgaatttgtattttttacttataaatt 258  Q
    |||| ||||||||||||||| |||||||| ||||||| ||||||||||    
T  32882707 tttttgttttcttaataagtgtgaatttgaattttttgcttataaatt 32882660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 57 - 277
Target Start/End: Complemental strand, 31887291 - 31887070
Alignment:
Q  57 catcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctt 156  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||  |||  |||||| |||| ||||||||||||    
T  31887291 catcttttccaatgtaaaattaaatgcaagttgcatttaatttgttctcttttttattttctccataatttttaaccaataaaaattatttttacatctt 31887192  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatt--tgtattttttacttata 254  Q
    |  ||||||||||||  || || || ||||||||  |||  |||||| |||  || |||||||| ||||||||| | ||||  ||| |||||| ||||||    
T  31887191 tccatgaaacttattaaaaaaaaaacacaaaaaatcatatatcaaatcactgagtgttagttttattaataagtgtaaattaatgt-ttttttgcttata 31887093  T
Q  255 aattaggacggagggagtacata 277  Q
    |||||| ||||||||||||||||    
T  31887092 aattagaacggagggagtacata 31887070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 21963938 - 21964145
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||  |||||||||||||||| ||||| |||  ||||||||||| |||||||||||| ||| || | ||  |||||| |||| |||||    
T  21963938 aaaaaatcatcttttt-aaagtaaaattaaatgtaaatttcatacaatttgttctcttttttattttctccatgatcaataaccaataaaaattattttt 21964036  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttac 249  Q
    ||||||||  || |||||||||  ||| |||| |||||||| |||| ||| |||||||||||||||||||| ||| ||||| |||||| |  |||||| |    
T  21964037 acatctttccataaaacttattttaaggagaacacaaaaaattatatctctaattactatgttttagttttattagtaagtgtgaattggatttttttgc 21964136  T
Q  250 ttataaatt 258  Q
    |||||||||    
T  21964137 ttataaatt 21964145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 145 - 273
Target Start/End: Complemental strand, 5121538 - 5121410
Alignment:
Q  145 tttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattt 244  Q
    |||||||||||||  ||||||||||||  ||| |||| ||||||||||||| ||||||| | || || |||||||||||||||||| |||||| || |||    
T  5121538 tttttacatctttccatgaaacttattttaaggagaacacaaaaaactatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttt 5121439  T
Q  245 tttacttataaattaggacggagggagta 273  Q
    ||| |||||||||||||||||||||||||    
T  5121438 tttgcttataaattaggacggagggagta 5121410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 59 - 227
Target Start/End: Original strand, 17598282 - 17598450
Alignment:
Q  59 tcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttt 158  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||  |||  |||| |||||| |||||||||||||     
T  17598282 tcttttccaatgtaaaattaaatgcaaattgcattcaatttattctcttttttattttctccataatttttaaccaatgagaattatttttacatctttc 17598381  T
Q  159 tatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaata 227  Q
     || ||| |||||||||  |||| |||||||| |||| ||||||| | || || ||| |||||||||||    
T  17598382 cataaaatttattccaaagagaacacaaaaaattatacctcaaatcattaagtgttaattttcttaata 17598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 7275029 - 7274829
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    ||||||||| |||||| ||||||||||  ||||  ||| ||||| | |||||  | ||  |||| | |||||||||||||||||   |||||||||||||    
T  7275029 aaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttattc 7274930  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||  | |||||||||||||||    ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| ||||||||||||||||    
T  7274929 caaagaaaatacaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacggagggagt 7274830  T
Q  273 a 273  Q
    |    
T  7274829 a 7274829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 21542485 - 21542625
Alignment:
Q  133 caataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtat 232  Q
    |||||| |||||||||||||||||  ||| |||||| ||||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| |    
T  21542485 caataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 21542584  T
Q  233 gaatttgtattttttacttataaattaggacggagggagta 273  Q
    || |||   |||||| ||||||| || ||||||||||||||    
T  21542585 gatttttgtttttttgcttataatttgggacggagggagta 21542625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 33756247 - 33756394
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatcttttta 160  Q
    |||| ||| |||||||||||||||||||||||| ||||||| |||||||| ||||||| ||||||  |||  |||| |||||| |||||||||||||  |    
T  33756247 tttttcaatgtaaaattaaatgcaaattgcattcaatttgtcctccttttcattttctccataatttttaaccaatgagaattatttttacatctttgca 33756346  T
Q  161 tgaaacttattccaagaagaatacaaaaaactataactcaaattacta 208  Q
    | ||||||| | |||| |||| | ||||||  ||| ||||||| ||||    
T  33756347 taaaacttacttcaaggagaacaaaaaaaataatacctcaaatcacta 33756394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 3095875 - 3095674
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||| | ||  |||| | |||||||||||||||||  ||| |||||| |    
T  3095875 taaaattaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttt 3095776  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
     | ||||| || |||||||||||||   ||||||  |||| ||||||||||||||||| ||||| |||   |||||||||||||| |||||||||| |||    
T  3095775 ccaaagaa-aacacaaaaaactatactccaaatttttatgctttagttttcttaataaatatgatttttgtttttttacttataatttaggacggaagga 3095677  T
Q  271 gta 273  Q
    |||    
T  3095676 gta 3095674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 11082401 - 11082199
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | ||||||||||||||||   ||| |||||| |    
T  11082401 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 11082302  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggaggga 270  Q
    |||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| | | |||   |||||| ||||||| || |||||||||||    
T  11082301 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgttatttttgtttttttgcttataatttgggacggaggga 11082202  T
Q  271 gta 273  Q
    |||    
T  11082201 gta 11082199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 274
Target Start/End: Complemental strand, 35129212 - 35129007
Alignment:
Q  70 gtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttt-ttacatctttttatgaaactt 168  Q
    ||||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | |||||||| |||||||||  ||| ||||||    
T  35129212 gtaaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaactt 35129113  T
Q  169 attccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagg 268  Q
     ||||||  | || |||||||||||||   ||||||  |||||||||||||||||||||||| ||| |||   |||||| ||||||| ||  ||||||||    
T  35129112 tttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgagacggagg 35129013  T
Q  269 gagtac 274  Q
    ||||||    
T  35129012 gagtac 35129007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 135 - 273
Target Start/End: Complemental strand, 5822126 - 5821989
Alignment:
Q  135 ataagaattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga 234  Q
    |||| |||||||||||||||||| |||||||||||||||||  | || |||| ||| ||||   |||| ||  || |||||||||||||||||||| |||    
T  5822126 ataaaaattgtttttacatctttctatgaaacttattccaaagataacacaagaaattatactacaaactataatattttagttttcttaataagtgtga 5822027  T
Q  235 atttgtattttttacttataaattaggacggagggagta 273  Q
    |  | | |||||| ||||||| || | ||||||||||||    
T  5822026 aaatat-ttttttccttataatttggtacggagggagta 5821989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 5881929 - 5881804
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| ||||||||||||||  | ||||||||||| || |||||| | || | ||| ||| |||||||  ||||| | ||  |||| | ||||||||||    
T  5881929 aaaaaatcatcttttccaaagagagattaaatgcaatttccatttattatgctatccctttcattttctctataattaataaccaattaaaattgttttt 5881830  T
Q  150 acatctttttatgaaacttattccaa 175  Q
    |||||||| ||||||||||| |||||    
T  5881829 acatctttctatgaaacttagtccaa 5881804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 3888417 - 3888477
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    ||||||| ||||| ||||||||||||||| |||||| ||||||||||| |||| |||||||    
T  3888417 atctttttcaaaggaaaattaaatgcaaagtgcattcaatttgttctctttttcattttct 3888477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 4031977 - 4032168
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    |||||||| || | ||||||||||||||| |||||| |||||| |||| |||| |||||||  ||||| || ||  |||| | |||||||||||||||||    
T  4031977 atcttttcaaagggaaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaacta-ccaatgaaaattgtttttacatctt 4032075  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaa---attactatgttttagttttcttaataagtatgaatttgtatttttt 247  Q
       || ||||||||| |||  | || ||||||||||||    |||   | ||||||||||||||||||||||||||| || |||| ||||||||    
T  4032076 ccgataaaacttatttcaaagataacacaaaaaactatgttacaaactactactatgttttagttttcttaataagtgtg-atttttatttttt 4032168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 194
Target Start/End: Original strand, 16524373 - 16524505
Alignment:
Q  61 ttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatcttttt 159  Q
    |||||||||  ||||||||||||||| |||||| |||||||||| ||||| |||||||  ||||| || ||  |||| | |||||||||||||||||  |    
T  16524373 ttttccaaaagaaaattaaatgcaaagtgcattcaatttgttct-cttttcattttctctataatcaacta-ccaatgaaaattgtttttacatcttcct 16524470  T
Q  160 atgaaacttattccaagaagaatacaaaaaactat 194  Q
    || ||||||||| |||  | || ||||||||||||    
T  16524471 ataaaacttatttcaaagataacacaaaaaactat 16524505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 4987933 - 4988069
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||| |||| |||| |||||||  ||||| || ||  |||| | |||| ||||||||||||    
T  4987933 atctttttcaaaggaaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaacta-ccaatgaaaattatttttacatctt 4988031  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactat 194  Q
      ||| ||||||||| |||  | || ||||||||||||    
T  4988032 cctataaaacttatttcaaagataacacaaaaaactat 4988069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 230
Target Start/End: Complemental strand, 16870970 - 16870789
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataa-taattattcaataagaattgtttt 148  Q
    |||||| ||| |||||||| |  |||||||||| ||||| |||| | |||| ||||| ||| |||||||| |||| ||| ||  |||||| | ||| |||    
T  16870970 aaaaaatcatattttccaatgagaaattaaatgaaaattacattcattttgctctccctttcattttctttataactaaataaccaataaaagttgattt 16870871  T
Q  149 tacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagt 230  Q
    || |||||| |||||||||||||  ||  | || |||||||||  ||    ||| ||||||||||||||||| |||||||||    
T  16870870 taaatctttctatgaaacttattttaaagataacacaaaaaacagtattataaactactatgttttagtttttttaataagt 16870789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 7163768 - 7163732
Alignment:
Q  199 caaattactatgttttagttttcttaataagtatgaa 235  Q
    ||||||| |||||||||||||||||||||||||||||    
T  7163768 caaattattatgttttagttttcttaataagtatgaa 7163732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 266
Target Start/End: Complemental strand, 12461516 - 12461390
Alignment:
Q  140 aattgtttttacatctttttatgaaa-cttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaattt 238  Q
    |||||||||||||||||| ||| ||| |||||| |||  | |||| |||||||||||   ||||||   ||||||||||||||||||||| | ||| ||     
T  12461516 aattgtttttacatctttctataaaaacttatttcaaagaaaata-aaaaaactatattccaaattctcatgttttagttttcttaataaatgtgatttg 12461418  T
Q  239 gtattttttacttataaattaggacgga 266  Q
     | ||||||| ||||||||| |||||||    
T  12461417 attttttttatttataaattgggacgga 12461390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 17599464 - 17599515
Alignment:
Q  222 ttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    ||||||||| ||||||  | |||||| |||||||||||||||||||||||||    
T  17599464 ttaataagtgtgaattaatgttttttgcttataaattaggacggagggagta 17599515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 228
Target Start/End: Original strand, 26298958 - 26299115
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttatttt-cttcataataattattcaataagaattgtttttacatctttttatgaaacttatt 171  Q
    |||||||||||||||| |||||| |||||||| |||||| |||| |  | ||||  ||| |||||| ||||| | ||| ||| ||||||||| |||||||    
T  26298958 aaattaaatgcaaattacatttattttgttctacttttttttttccgacgtaatcgttaatcaatatgaatt-tattttcatttttttatgatacttatt 26299056  T
Q  172 ccaagaa--gaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |||| ||   || | | |||| || | |||||||||||||||||||||  |||||||||    
T  26299057 ccaataaataaaaagacaaaattacacctcaaattactatgttttagtaatcttaataa 26299115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 228
Target Start/End: Complemental strand, 30794346 - 30794191
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    ||||||||||||||||  |||||||||  ||||  || |||||||| ||| |  | ||  |||| | || ||||||||||||||  ||| ||||||||||    
T  30794346 aaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctataaaacttattc 30794247  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |||  | || | |||||| ||||  |||||||  ||| ||||||||||||||||||    
T  30794246 caaataaaacataaaaaattatacttcaaattcttatattttagttttcttaataa 30794191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 34177685 - 34177596
Alignment:
Q  183 acaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||||||||||||   ||||||  ||||||||| |||||||||||||| ||| |||   |||||| ||||||| ||  ||||||||||||    
T  34177685 acaaaaaactatattccaaattcttatgttttaattttcttaataagtgtgatttttgtttttttgcttataatttgagacggagggagt 34177596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 5300762 - 5300702
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttct 118  Q
    ||||||||||||  |||||||||| |||| |||||| |||||| |||  ||||||||||||    
T  5300762 atcttttccaaaagaaaattaaatacaaagtgcattcaatttgctcttttttttattttct 5300702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 62 - 273
Target Start/End: Original strand, 4622 - 4833
Alignment:
Q  62 tttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttat 161  Q
    |||||||  ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||  |||  |||| |||||| |||||||||||||  ||    
T  4622 tttccaatataaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcgat 4721  T
Q  162 gaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattagg 261  Q
    |||||||||| |||| |||| || ||||| |||| ||||||| |||| || |||||||||||||||||| |||||| || |||||| |||||||||||||    
T  4722 gaaacttatttcaaggagaacactaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattagg 4821  T
Q  262 acggagggagta 273  Q
    ||||||||||||    
T  4822 acggagggagta 4833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 157801 - 158000
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattc 172  Q
    |||||||||||||||| ||||||||||  ||||  ||||||||| | |||||  | |   |||| | ||||||||||||||||    |||||||||||||    
T  157801 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccatgaaacttattc 157900  T
Q  173 caagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagt 272  Q
    |||  | || ||||||||||||    ||||||  |||| |||||||||||||||||||||| |||| |||||||| ||||||| |||| |||||||||||    
T  157901 caaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtatg-atttttattttttgcttataatttagaacggagggagt 157999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 52756 - 52658
Alignment:
Q  73 aaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttatt 171  Q
    ||||||||||| |||| ||||||||||  ||||  || |||||||| |||||| | || ||||| | |||||||||||||| |||  || |||||||||    
T  52756 aaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacatatttccatcaaacttatt 52658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 74 - 273
Target Start/End: Original strand, 10053 - 10251
Alignment:
Q  74 aattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttattcc 173  Q
    ||||||||||||||| |||| |||||  ||||  ||| ||||| | |||||  | || ||||| | |||||||||||||||||  ||| |||||| |||     
T  10053 aattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttct 10152  T
Q  174 aagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtattttttacttataaattaggacggagggagta 273  Q
    ||  | || ||||||||||| |   ||||||  ||||||||| ||||||||||||||||| |||| | |||||| ||||||| |||||||||||||||||    
T  10153 aaagaaaacacaaaaaactacattccaaattcttatgttttaattttcttaataagtatg-atttatttttttttcttataatttaggacggagggagta 10251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 245
Target Start/End: Complemental strand, 6050 - 5857
Alignment:
Q  52 aaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgttttta 150  Q
    |||| |||||||| ||||  ||||||||||||||| |||||| |||||  |||| |||| ||||| |  ||||| || ||| |||  | |||||||||||    
T  6050 aaaaacatctttttcaaaagaaaattaaatgcaaagtgcattcaatttactctctttttcattttttctataatcaactat-caaggaaaattgttttta 5952  T
Q  151 catctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaatttgtatttt 245  Q
    ||||||  ||| ||||||||| |||  | || |||||||||||||   |||| |||||||||||| |||||||||||||| ||| ||| ||||||    
T  5951 catcttcctataaaacttatttcaatgataacacaaaaaactatattacaaactactatgttttaattttcttaataagtgtgattttttatttt 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 274
Target Start/End: Complemental strand, 729 - 526
Alignment:
Q  71 taaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgtttttacatctttttatgaaacttat 170  Q
    |||||||||||||||||| |||| |||||  |||   ||| ||||| | |||||  | ||  |||| | ||||||||||||||||   ||| |||||| |    
T  729 taaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 630  T
Q  171 tccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga-atttgtattttttacttataaattaggacggaggg 269  Q
    | |||  | || ||| |||||||||   ||||||  |||||||||||||||||||||||| ||| |||||| |||||| ||||||| |||||||||||||    
T  629 ttcaaagaaaacacataaaactatactccaaattcttatgttttagttttcttaataagtgtgatatttgt-ttttttgcttataatttaggacggaggg 531  T
Q  270 agtac 274  Q
    |||||    
T  530 agtac 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 58 - 277
Target Start/End: Original strand, 3160 - 3383
Alignment:
Q  58 atcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataat-aattattcaataagaattgtttttacatctt 156  Q
    ||||||||||||| ||||||| ||||||| |||||| |||||||| || |||| |||||||  ||||| || ||  ||||   ||||||||||| |||||    
T  3160 atcttttccaaagcaaaattatatgcaaagtgcattcaatttgttttctttttcattttctctataatcaacta-ccaatggaaattgtttttagatctt 3258  T
Q  157 tttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatgaattt----gtattttttactta 252  Q
      ||| ||||||||| |||  | || ||||||||||||    |||| |||||||||||| |||||||||||||| ||| |||     | |||||| ||||    
T  3259 cctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatgttttaattttcttaataagtgtgatttttttatttttttttgctta 3358  T
Q  253 taaattaggacggagggagtacata 277  Q
    |||  | ||||||||||||||||||    
T  3359 taatatgggacggagggagtacata 3383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 161006 - 160872
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataagtatga-attt 238  Q
    ||||||||||||| |||| ||| ||||||||| |||| | || |||| |||||||    |||| |||||||||||| |||||||||||||| |||  |||    
T  161006 aattgtttttacaactttctatcaaacttatttcaaggataacacaagaaactatgttgcaaactactatgttttaattttcttaataagtgtgattttt 160907  T
Q  239 gtattttttacttataaattaggacggagggagta 273  Q
     | |||||| |||||||  | ||||||||||||||    
T  160906 tttttttttgcttataatatgggacggagggagta 160872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 230
Target Start/End: Complemental strand, 1840 - 1657
Alignment:
Q  50 aaaaaaccatcttttccaaagtaaaattaaatgcaaattgcatttaatttgttctcctttttattttcttcataataattattcaataagaattgttttt 149  Q
    |||||| | |||||| |||||| ||| ||||| |||||||||||||||||||| ||| | | ||||||    ||| || ||  |||| | || |||||||    
T  1840 aaaaaatcttctttttcaaagtgaaactaaatacaaattgcatttaatttgttgtccctctcattttc----taacaaataaccaatgaaaaatgttttt 1745  T
Q  150 acatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattact-------atgttttagttttcttaataagt 230  Q
    |||||||   |||||||| |||||||| | || |||| ||| |||||  |||||||||       |||||||||||||||||||||||    
T  1744 acatcttcccatgaaactaattccaaggaaaacacaataaattataatccaaattactatctatcatgttttagttttcttaataagt 1657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 154935 - 155022
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactcaaattactatgttttagttttcttaataa 228  Q
    |||||||||||||||||| ||| |||||| || |||  | |||||||||| |||||  ||| |||  ||||||||||||||||||||||    
T  154935 aattgtttttacatctttctataaaacttttttcaaagaaaatacaaaaa-ctatatttcagattcttatgttttagttttcttaataa 155022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 78031 - 78167
Alignment:
Q  140 aattgtttttacatctttttatgaaacttattccaagaagaatacaaaaaactataactc-aaattactatgttttagttttcttaataagtatga---a 235  Q
    |||||||||||||||||  |||  ||||| || |||  | || ||||||||||||| ||| |||||  |||||||||||||||||||||||| |||        
T  78031 aattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaaactata-ctctaaattcttatgttttagttttcttaataagtgtgatttt 78129  T
Q  236 tttgtattttttacttataaattaggacggagggagta 273  Q
    ||| | |||||| ||||||| || ||||||||||||||    
T  78130 ttttttttttttgcttataatttgggacggagggagta 78167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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