View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7950_low_3 (Length: 729)

Name: NF7950_low_3
Description: NF7950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7950_low_3
NF7950_low_3
[»] chr6 (33 HSPs)
chr6 (230-683)||(6922515-6922970)
chr6 (18-103)||(6922310-6922395)
chr6 (625-714)||(6922956-6923045)
chr6 (346-447)||(7326329-7326430)
chr6 (347-452)||(12606654-12606759)
chr6 (336-452)||(20599383-20599496)
chr6 (336-452)||(21023674-21023790)
chr6 (530-612)||(6949288-6949370)
chr6 (336-434)||(5925603-5925701)
chr6 (233-311)||(6949106-6949186)
chr6 (347-452)||(24896868-24896970)
chr6 (337-384)||(7339567-7339614)
chr6 (336-443)||(8176924-8177031)
chr6 (354-394)||(29045827-29045867)
chr6 (336-391)||(2994773-2994828)
chr6 (352-442)||(2556244-2556334)
chr6 (339-416)||(3294806-3294884)
chr6 (336-416)||(10517241-10517322)
chr6 (336-416)||(33646877-33646958)
chr6 (625-661)||(6923069-6923105)
chr6 (373-416)||(978119-978162)
chr6 (342-424)||(17534881-17534963)
chr6 (373-416)||(18904307-18904350)
chr6 (373-448)||(24319023-24319098)
chr6 (347-450)||(24618960-24619062)
chr6 (373-424)||(31952303-31952354)
chr6 (373-424)||(32788839-32788890)
chr6 (380-418)||(3974478-3974516)
chr6 (350-404)||(12654499-12654553)
chr6 (120-149)||(6922407-6922436)
chr6 (546-615)||(6943649-6943718)
chr6 (375-416)||(7897105-7897146)
chr6 (336-416)||(12284163-12284244)
[»] chr8 (23 HSPs)
chr8 (336-459)||(28300083-28300207)
chr8 (344-424)||(15837171-15837251)
chr8 (336-452)||(12959711-12959827)
chr8 (347-440)||(42445770-42445863)
chr8 (342-393)||(19756422-19756473)
chr8 (346-452)||(1028721-1028827)
chr8 (336-444)||(13147732-13147839)
chr8 (342-424)||(38283158-38283240)
chr8 (405-460)||(31441262-31441318)
chr8 (337-416)||(34894411-34894491)
chr8 (342-444)||(481025-481127)
chr8 (373-424)||(12770402-12770453)
chr8 (336-416)||(1337062-1337143)
chr8 (336-416)||(5328514-5328595)
chr8 (336-416)||(8034359-8034440)
chr8 (336-416)||(17072510-17072591)
chr8 (336-416)||(17575680-17575761)
chr8 (336-416)||(22274559-22274639)
chr8 (336-416)||(29733952-29734033)
chr8 (336-416)||(31450904-31450985)
chr8 (336-416)||(34873128-34873209)
chr8 (336-416)||(38219515-38219596)
chr8 (542-591)||(42437945-42437994)
[»] chr4 (45 HSPs)
chr4 (337-452)||(31351662-31351777)
chr4 (336-460)||(35010371-35010496)
chr4 (349-452)||(35130612-35130715)
chr4 (336-444)||(50263978-50264085)
chr4 (336-461)||(17882233-17882357)
chr4 (347-444)||(54733276-54733372)
chr4 (336-452)||(7921588-7921704)
chr4 (352-452)||(28091333-28091433)
chr4 (336-452)||(13538243-13538359)
chr4 (336-452)||(49479460-49479576)
chr4 (347-452)||(38415494-38415599)
chr4 (337-452)||(40981775-40981890)
chr4 (375-452)||(55967784-55967861)
chr4 (336-452)||(25273057-25273172)
chr4 (347-452)||(45333451-45333558)
chr4 (347-452)||(45341141-45341248)
chr4 (347-452)||(42657506-42657611)
chr4 (347-452)||(26336848-26336955)
chr4 (347-442)||(9460176-9460270)
chr4 (347-434)||(10601888-10601975)
chr4 (336-414)||(39691500-39691578)
chr4 (340-424)||(12625863-12625947)
chr4 (345-441)||(3746384-3746479)
chr4 (340-424)||(51890831-51890915)
chr4 (336-452)||(23894273-23894389)
chr4 (373-424)||(29406391-29406442)
chr4 (336-416)||(2222581-2222662)
chr4 (336-416)||(32760684-32760764)
chr4 (373-422)||(38848105-38848154)
chr4 (347-424)||(39790110-39790186)
chr4 (350-418)||(38438367-38438435)
chr4 (373-424)||(2629613-2629664)
chr4 (373-424)||(11294823-11294874)
chr4 (373-416)||(13578450-13578493)
chr4 (354-425)||(19505509-19505580)
chr4 (373-416)||(42134442-42134485)
chr4 (530-612)||(1792070-1792152)
chr4 (380-414)||(30696764-30696798)
chr4 (336-381)||(1020158-1020203)
chr4 (336-416)||(3036002-3036083)
chr4 (336-416)||(10402483-10402564)
chr4 (336-416)||(30057264-30057345)
chr4 (347-385)||(42721498-42721538)
chr4 (336-416)||(48950826-48950907)
chr4 (336-416)||(49901524-49901605)
[»] chr2 (27 HSPs)
chr2 (336-452)||(31068881-31068997)
chr2 (337-442)||(14368405-14368510)
chr2 (342-428)||(44287819-44287905)
chr2 (336-444)||(34319803-34319911)
chr2 (337-453)||(37123559-37123675)
chr2 (346-452)||(8915568-8915674)
chr2 (336-452)||(9198919-9199034)
chr2 (354-439)||(9932020-9932105)
chr2 (347-452)||(32087342-32087439)
chr2 (336-407)||(23948690-23948758)
chr2 (354-452)||(34028101-34028191)
chr2 (357-452)||(9294131-9294225)
chr2 (347-444)||(20156924-20157013)
chr2 (373-432)||(21297412-21297471)
chr2 (336-404)||(29696967-29697035)
chr2 (342-386)||(38690791-38690835)
chr2 (373-424)||(3596284-3596335)
chr2 (336-416)||(33228880-33228961)
chr2 (347-452)||(11997617-11997724)
chr2 (373-416)||(17777148-17777191)
chr2 (336-418)||(44831444-44831526)
chr2 (336-416)||(1844859-1844940)
chr2 (336-416)||(3287004-3287084)
chr2 (336-416)||(3438990-3439071)
chr2 (336-416)||(4183218-4183299)
chr2 (336-416)||(28194674-28194755)
chr2 (336-416)||(40535396-40535477)
[»] chr7 (42 HSPs)
chr7 (336-452)||(23198513-23198628)
chr7 (336-464)||(47684475-47684604)
chr7 (336-444)||(25091173-25091280)
chr7 (341-412)||(37307703-37307774)
chr7 (342-460)||(45967355-45967474)
chr7 (346-444)||(23982027-23982125)
chr7 (336-440)||(13054611-13054714)
chr7 (373-444)||(36876997-36877068)
chr7 (336-441)||(41780475-41780579)
chr7 (336-452)||(27227252-27227368)
chr7 (341-444)||(24250139-24250242)
chr7 (16-81)||(1998855-1998921)
chr7 (350-452)||(32958493-32958595)
chr7 (336-452)||(9667219-9667335)
chr7 (336-452)||(27744583-27744698)
chr7 (362-444)||(5808398-5808480)
chr7 (336-425)||(45725111-45725200)
chr7 (355-444)||(44165893-44165983)
chr7 (374-452)||(19554710-19554788)
chr7 (342-395)||(39584248-39584301)
chr7 (342-424)||(4886873-4886954)
chr7 (373-424)||(41331064-41331115)
chr7 (340-424)||(7836888-7836972)
chr7 (336-416)||(32047131-32047212)
chr7 (336-416)||(43119379-43119460)
chr7 (347-383)||(7683451-7683487)
chr7 (352-416)||(41465876-41465939)
chr7 (373-416)||(9712183-9712226)
chr7 (342-416)||(23102511-23102586)
chr7 (346-405)||(27731343-27731401)
chr7 (373-416)||(35683112-35683155)
chr7 (373-424)||(37411722-37411773)
chr7 (377-424)||(45284808-45284855)
chr7 (373-416)||(46758284-46758327)
chr7 (343-416)||(9877221-9877295)
chr7 (346-384)||(30745961-30745999)
chr7 (336-416)||(12772157-12772238)
chr7 (336-416)||(24781072-24781153)
chr7 (336-416)||(27424881-27424961)
chr7 (375-416)||(34891248-34891289)
chr7 (336-416)||(35950170-35950251)
chr7 (379-452)||(38524864-38524937)
[»] chr3 (37 HSPs)
chr3 (336-442)||(38745281-38745387)
chr3 (336-426)||(41259941-41260031)
chr3 (346-450)||(54240610-54240714)
chr3 (356-449)||(17002906-17002996)
chr3 (347-452)||(51829556-51829660)
chr3 (339-439)||(6757254-6757354)
chr3 (336-459)||(9737564-9737688)
chr3 (354-452)||(27100918-27101016)
chr3 (336-388)||(11988919-11988971)
chr3 (346-452)||(32594568-32594671)
chr3 (348-446)||(36786572-36786672)
chr3 (356-452)||(55009526-55009622)
chr3 (341-452)||(33439980-33440091)
chr3 (342-403)||(35381811-35381872)
chr3 (352-452)||(21892527-21892626)
chr3 (346-390)||(52910386-52910430)
chr3 (353-444)||(21177040-21177130)
chr3 (336-442)||(49284975-49285080)
chr3 (375-444)||(4227731-4227800)
chr3 (340-424)||(24303424-24303508)
chr3 (396-442)||(48120349-48120395)
chr3 (336-416)||(25883935-25884016)
chr3 (336-416)||(39719977-39720058)
chr3 (336-416)||(41936354-41936435)
chr3 (336-416)||(53432684-53432765)
chr3 (346-406)||(50959036-50959095)
chr3 (373-424)||(19222571-19222622)
chr3 (373-424)||(26880211-26880262)
chr3 (413-452)||(35962944-35962983)
chr3 (342-424)||(48515339-48515421)
chr3 (351-437)||(6459197-6459283)
chr3 (364-406)||(35960331-35960373)
chr3 (375-416)||(32732524-32732565)
chr3 (336-416)||(34102558-34102639)
chr3 (336-416)||(37488407-37488488)
chr3 (336-404)||(44651930-44651998)
chr3 (336-416)||(45701386-45701467)
[»] chr5 (19 HSPs)
chr5 (347-452)||(30327659-30327764)
chr5 (336-448)||(24793482-24793594)
chr5 (336-452)||(43405992-43406108)
chr5 (336-448)||(28282343-28282455)
chr5 (344-459)||(31478684-31478800)
chr5 (345-422)||(8032893-8032970)
chr5 (353-418)||(32398254-32398319)
chr5 (336-452)||(15409156-15409272)
chr5 (349-450)||(20706511-20706612)
chr5 (377-426)||(1963871-1963920)
chr5 (336-416)||(6558843-6558924)
chr5 (351-404)||(39968966-39969019)
chr5 (372-452)||(28580436-28580516)
chr5 (372-452)||(36730206-36730285)
chr5 (373-416)||(3740996-3741039)
chr5 (336-416)||(13621892-13621974)
chr5 (373-416)||(27241683-27241726)
chr5 (374-444)||(41083524-41083593)
chr5 (336-416)||(15241438-15241519)
[»] scaffold0166 (1 HSPs)
scaffold0166 (336-448)||(35865-35977)
[»] chr1 (25 HSPs)
chr1 (336-452)||(8757262-8757378)
chr1 (347-452)||(35996982-35997087)
chr1 (346-452)||(2098750-2098855)
chr1 (347-413)||(2661632-2661698)
chr1 (340-424)||(31124590-31124674)
chr1 (339-452)||(7550016-7550127)
chr1 (342-416)||(42490363-42490438)
chr1 (336-416)||(21265698-21265779)
chr1 (336-416)||(33207247-33207328)
chr1 (380-416)||(42908810-42908846)
chr1 (360-403)||(5444306-5444349)
chr1 (347-418)||(13350793-13350864)
chr1 (373-444)||(36666561-36666632)
chr1 (380-422)||(7438654-7438696)
chr1 (343-424)||(23991219-23991300)
chr1 (373-414)||(3742302-3742343)
chr1 (336-416)||(12650331-12650412)
chr1 (336-416)||(28564292-28564373)
chr1 (380-421)||(29936701-29936742)
chr1 (336-416)||(32594293-32594374)
chr1 (336-416)||(39346926-39347007)
chr1 (373-442)||(43021607-43021676)
chr1 (336-416)||(44732675-44732756)
chr1 (344-424)||(45416134-45416214)
chr1 (336-416)||(50119014-50119094)
[»] scaffold0178 (1 HSPs)
scaffold0178 (348-394)||(9703-9749)
[»] scaffold0035 (1 HSPs)
scaffold0035 (353-452)||(23709-23806)
[»] scaffold0040 (1 HSPs)
scaffold0040 (339-403)||(58636-58700)
[»] scaffold0024 (1 HSPs)
scaffold0024 (28-82)||(160984-161038)
[»] scaffold0088 (1 HSPs)
scaffold0088 (336-416)||(10773-10854)
[»] scaffold0067 (1 HSPs)
scaffold0067 (530-615)||(41470-41555)


Alignment Details
Target: chr6 (Bit Score: 292; Significance: 1e-163; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 230 - 683
Target Start/End: Original strand, 6922515 - 6922970
Alignment:
Q  230 ccggagtcaatcttcattaatttgttttattttatttgccttnnnnnnngttgtgttttaaaatatttaatttctatggtaccattgaaaattcatcann 329  Q
    ||||||||||||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||       
T  6922515 ccggagtcaatcttcgttaatttgttttattttatttgccttaaaaaaagttgtgttttaaaatatttaatttctatggtaccattgaaaattcatcttt 6922614  T
Q  330 nnnnnngtcaa-atagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccat 428  Q
           ||   ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||    
T  6922615 ttttttttccggatagcctagtggctagattcacacacattatatgtggagaagtggggaatctggagtttgaaccccgacccctgcacaaattattcat 6922714  T
Q  429 ggtagctaccaactgaactacac-tacgggactgaaaaaacatcatttactatccaatccatctttaaattagtagttaaatgggnnnnnnnnnnnnnnn 527  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |                   
T  6922715 ggtagctaccaactgaactacacttacgggactgaaaaaacatcatttactatccaatccatctttaaattagtagttaaatgagttttttatttttatt 6922814  T
Q  528 nngaagaaaacaaaaatatttcctataatttaaaattataataactaaatatcatttactaaaagtggcagtgaaataaaatttatttgttccgaaaaca 627  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  6922815 ttgaagaaaacaaaaatatttcctataatttaaaattataataactaaatatcatttactaaaagtggcagtgaaataaaatttatttgttctggaaaca 6922914  T
Q  628 taatttgaaaaaatctatattccacgtatgtagtcaaggacacataatttgaaaaa 683  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6922915 taatttgaaaaaatctatattccacgtatgtagtcaaggagacataatttgaaaaa 6922970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 6922310 - 6922395
Alignment:
Q  18 aacagtaggttgttgaagttgtacgtgaaaacccttcgaactttttgtggaagaaaccctagaagttgtggagaacgatgcggctg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6922310 aacagtaggttgttgaagttgtacgtgaaaacccttcgaactttttgtggaagaaaccctagaagttgtggagaacgatgcggctg 6922395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 625 - 714
Target Start/End: Original strand, 6922956 - 6923045
Alignment:
Q  625 acataatttgaaaaaatctatattccacgtatgtagtcaaggacacataatttgaaaaaatctctatccaatgtaatatcatcaattcat 714  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6922956 acataatttgaaaaattctatattccacgtatgtagtcaaggagacataatttgaaaaaatctctatccaatgtaatatcatcaattcat 6923045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 346 - 447
Target Start/End: Original strand, 7326329 - 7326430
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaa 445  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  7326329 ctagtggctaaattcacacacattatgtgtggagaagtggggaatctagggttcgaaacccgacccctgctcaaattatccctggtagctaccaactgaa 7326428  T
Q  446 ct 447  Q
    ||    
T  7326429 ct 7326430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 12606759 - 12606654
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaac 446  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| || ||||||||| |||  ||| |||||||||||| | ||||||||||||||| |    
T  12606759 tagtggctagattcacacacattatatgtgaagaagtggggaatctggggttcgaacctcgattcctacacaaattatccctagtagctaccaactgagc 12606660  T
Q  447 tacact 452  Q
    ||||||    
T  12606659 tacact 12606654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 20599383 - 20599496
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    |||| |||| ||||||| |||| ||||||   ||||||||||||||||||||||||||| |||| ||||||||||| |||||| | ||||| ||||||||    
T  20599383 gtcagatagtctagtggttagactcacac---ttatgtgtggagaagtggggaatccggggttcaaaccccgacccttgcacataatatccctggtagct 20599479  T
Q  436 accaactgaactacact 452  Q
    ||||||||| |||||||    
T  20599480 accaactgagctacact 20599496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 21023674 - 21023790
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| | |    ||| |||||||||||| ||||||||    
T  21023674 gtcaaatagtctagtgacaagattcacacacattatgtgtggagaagtggagaatccggggttcgaatctcagttcctacacaaattatccctggtagct 21023773  T
Q  436 accaactgaactacact 452  Q
    ||||| ||| |||||||    
T  21023774 accaattgagctacact 21023790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 530 - 612
Target Start/End: Original strand, 6949288 - 6949370
Alignment:
Q  530 gaagaaaacaaaaatatttcctataatttaaaattataataactaaatatcatttactaaaagtggcagtgaaataaaattta 612  Q
    ||||||||||||||| |||||||| |||| |||||||||| | |||||||||||||||||||||| | |||||||||||||||    
T  6949288 gaagaaaacaaaaatgtttcctatcattttaaattataatgattaaatatcatttactaaaagtgacggtgaaataaaattta 6949370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 336 - 434
Target Start/End: Complemental strand, 5925701 - 5925603
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagc 434  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| |  || |||||||  ||||||||||||| |||  |||||||    
T  5925701 gtcaagtaacctagtggctagattcacacacattatgtgtgaagaagtggggaatccaggatttgaaccccagcccctgcacaaatgatctctggtagc 5925603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 233 - 311
Target Start/End: Original strand, 6949106 - 6949186
Alignment:
Q  233 gagtcaatcttcattaatttgttttattttattt--gccttnnnnnnngttgtgttttaaaatatttaatttctatggtac 311  Q
    ||||||||||||||||||||||||||||||||||  |||||       |||||| ||||||||||||||||||||||||||    
T  6949106 gagtcaatcttcattaatttgttttattttatttttgccttaataaaagttgtggtttaaaatatttaatttctatggtac 6949186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 24896868 - 24896970
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaac 446  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||| | ||||||| | ||  ||| ||||||| ||||| || ||| |||||||||| |    
T  24896868 tagtggctaaattcacacacattatgtgtggtgaagtggggaatccag-gttcgaatctcg--ccccgcacaaaatatccttgctagttaccaactgagc 24896964  T
Q  447 tacact 452  Q
    ||||||    
T  24896965 tacact 24896970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 384
Target Start/End: Complemental strand, 7339614 - 7339567
Alignment:
Q  337 tcaaatagcctagtggctagattcacacacattatgtgtggagaagtg 384  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  7339614 tcaagtagcctagtggctagattcacacacattatgtgtgaagaagtg 7339567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 443
Target Start/End: Complemental strand, 8177031 - 8176924
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| || ||||||||||| ||||| ||||||||||||||||||||||| |||| ||  |||| |||  ||| ||||||| ||||||||  || || ||    
T  8177031 gtcaagtaacctagtggctaaattcatacacattatgtgtggagaagtggagaattcgaggttcaaacatcgatccctgcataaattatctctgataact 8176932  T
Q  436 accaactg 443  Q
    ||||||||    
T  8176931 accaactg 8176924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 394
Target Start/End: Complemental strand, 29045867 - 29045827
Alignment:
Q  354 tagattcacacacattatgtgtggagaagtggggaatccgg 394  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  29045867 tagattcacacacattatgtatggagaagtggggaatccgg 29045827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 336 - 391
Target Start/End: Original strand, 2994773 - 2994828
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatc 391  Q
    |||||||||| |||||||||| ||||||| | ||||||||||| ||||||||||||    
T  2994773 gtcaaatagcttagtggctagtttcacacgctttatgtgtggataagtggggaatc 2994828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 2556244 - 2556334
Alignment:
Q  352 gctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaact 442  Q
    |||| ||||||||||||||| |||| |||||||| |||| || | ||||||| | ||||||| ||||| |||||  || ||||||||||||    
T  2556244 gctaaattcacacacattatatgtgaagaagtggagaattcgaaattcgaactctgacccctacacaatttatcactgatagctaccaact 2556334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 339 - 416
Target Start/End: Complemental strand, 3294884 - 3294806
Alignment:
Q  339 aaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||||||||  |||||||  |||  |||| ||||||||||  ||||| |||||||||||||||||||||    
T  3294884 aaatagcctagtggctagaactcacacaatttaattgtgaagaagtggggtgtccggggttcgaaccccgacccctgca 3294806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 10517322 - 10517241
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| |  ||||| |||||||||||||||||||||    
T  10517322 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgacccctgca 10517241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 33646958 - 33646877
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||  |||||||||||||||||||||    
T  33646958 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgca 33646877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 625 - 661
Target Start/End: Original strand, 6923069 - 6923105
Alignment:
Q  625 acataatttgaaaaaatctatattccacgtatgtagt 661  Q
    ||||||||||||||||||||||||||||| |||||||    
T  6923069 acataatttgaaaaaatctatattccacgcatgtagt 6923105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 978119 - 978162
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||||  ||||| |||||||||||||||||||||    
T  978119 tgtggagaagtggggtgtccggtgttcgaaccccgacccctgca 978162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 424
Target Start/End: Complemental strand, 17534963 - 17534881
Alignment:
Q  342 tagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    ||||||||||||||||  ||||||| ||||  |||||||||||  ||  |||||||||||||||||| |||||||| |||||||    
T  17534963 tagcctagtggctagaactcacaca-attaaatgtggagaagtcaggtgtccggagttcgaaccccggcccctgcataaattat 17534881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 18904350 - 18904307
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||||  ||||| |||||||||||||||||||||    
T  18904350 tgtggagaagtggggtgtccggggttcgaaccccgacccctgca 18904307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 448
Target Start/End: Complemental strand, 24319098 - 24319023
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaacta 448  Q
    ||||||||||||| |  ||||| |||||||||||| |||||||| ||||||| ||  ||  |||||||||||||||    
T  24319098 tgtggagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgaacta 24319023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 450
Target Start/End: Original strand, 24618960 - 24619062
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaac 446  Q
    |||||||||  |||||||||||||| | ||||||||| || |||  || |||||||| ||| || ||||| ||||||||  | ||||||||||||||| |    
T  24618960 tagtggctacgttcacacacattatatatggagaagtaggaaattggg-gttcgaactccggccactgcataaattatctttagtagctaccaactgagc 24619058  T
Q  447 taca 450  Q
    ||||    
T  24619059 taca 24619062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 31952354 - 31952303
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  ||||| ||||||||||| ||||||||| |||||||    
T  31952354 tgtggagaagtggggtgtccggggttcgaaccccaacccctgcataaattat 31952303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 32788839 - 32788890
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||| ||||||||||  ||||||||||||||||| ||||||||| |||||||    
T  32788839 tgtgtagaagtggggtgtccggagttcgaaccccaacccctgcataaattat 32788890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 3974516 - 3974478
Alignment:
Q  380 aagtggggaatccggagttcgaaccccgacccctgcaca 418  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  3974516 aagtggggagtccgaagttcgaaccccgacccctgcaca 3974478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 12654499 - 12654553
Alignment:
Q  350 tggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaacc 404  Q
    ||||||||||||||||||||||||||| | ||||||  ||||  |||||||||||    
T  12654499 tggctagattcacacacattatgtgtgaaaaagtggaaaatctagagttcgaacc 12654553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 6922407 - 6922436
Alignment:
Q  120 gaaagaagaacgatgcggctgttgaaagtg 149  Q
    ||||||||||||||||||||||||||||||    
T  6922407 gaaagaagaacgatgcggctgttgaaagtg 6922436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 615
Target Start/End: Original strand, 6943649 - 6943718
Alignment:
Q  546 tttcctataatttaaaattataataactaaatatcatttactaaaagtggcagtgaaataaaatttattt 615  Q
    |||||||| | |||||||||||||||||| |||| |||||| ||||||   | ||||||| |||||||||    
T  6943649 tttcctatcaattaaaattataataactagatattatttaccaaaagtttaaatgaaatacaatttattt 6943718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 416
Target Start/End: Original strand, 7897105 - 7897146
Alignment:
Q  375 tggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  7897105 tggagaagtggggtgtccggggttcgaaccccgacccctgca 7897146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 12284244 - 12284163
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||| ||||||||||||  |||||||  |||  ||||||||||||| |  |||||||||||||||||||| ||||||    
T  12284244 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtttccggagttcgaaccccgacacctgca 12284163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 4e-40; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 336 - 459
Target Start/End: Complemental strand, 28300207 - 28300083
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||    
T  28300207 gtcaagtagccttgtggctagattcacacacattatgtatggagaagtggggaatccggggttcgaaccccggcccctgcacaaattatcattggtagct 28300108  T
Q  436 accaactgaactaca-ctacgggac 459  Q
    ||||||||| ||||| |||||||||    
T  28300107 accaactgagctacacctacgggac 28300083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 344 - 424
Target Start/End: Complemental strand, 15837251 - 15837171
Alignment:
Q  344 gcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  15837251 gcctagtggctggattcacacacattatgtgtggaaaaatggggaatccagagttcgaaccccgacccctgcacaaattat 15837171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 12959827 - 12959711
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| |||| | ||||||||||||||||||||||| || | | |||||||||||| || ||||||||||| |||||||||||| |||||| || |||||    
T  12959827 gtcaagtagcttcgtggctagattcacacacattatatgcgaataagtggggaatctggggttcgaaccccaacccctgcacaagttatccctgatagct 12959728  T
Q  436 accaactgaactacact 452  Q
    ||||||||| |||||||    
T  12959727 accaactgagctacact 12959711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 347 - 440
Target Start/End: Complemental strand, 42445863 - 42445770
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaa 440  Q
    ||||||||||||||||||||||||||||| || ||||||  ||| | |||||||||||| |||| ||||||||||||||  || ||||||||||    
T  42445863 tagtggctagattcacacacattatgtgtagaaaagtggataattcagagttcgaaccctgaccgctgcacaaattatctctgatagctaccaa 42445770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 342 - 393
Target Start/End: Original strand, 19756422 - 19756473
Alignment:
Q  342 tagcctagtggctagattcacacacattatgtgtggagaagtggggaatccg 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19756422 tagcctagtggctagattcacacacattatgtgtggagaagtggggattccg 19756473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 346 - 452
Target Start/End: Complemental strand, 1028827 - 1028721
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaa 445  Q
    |||||||||||||||||||||||||||| || |||||||  |||||||||||||||||| |  |||||||||| | | |||  ||||| |||||| |||     
T  1028827 ctagtggctagattcacacacattatgtatgaagaagtgaagaatccggagttcgaacctcagcccctgcacataatgtcctcggtagttaccaattgag 1028728  T
Q  446 ctacact 452  Q
    |||||||    
T  1028727 ctacact 1028721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 336 - 444
Target Start/End: Original strand, 13147732 - 13147839
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| ||||||||||||||||||||||||||||||| ||||||| | |||  || ||||||||  ||    ||||||||||||||  ||||||||    
T  13147732 gtcaagtagtctagtggctagattcacacacattatgtgtgaagaagtgtgaaatttggggttcgaacttcg-gttctgcacaaattatcactggtagct 13147830  T
Q  436 accaactga 444  Q
    |||||||||    
T  13147831 accaactga 13147839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 342 - 424
Target Start/End: Complemental strand, 38283240 - 38283158
Alignment:
Q  342 tagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||| |||||||| ||||  |||||||||||||||  || || |||||||||||| |||||||| |||||||    
T  38283240 tagcctagtggctagagttcacaca-attaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattat 38283158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 460
Target Start/End: Complemental strand, 31441318 - 31441262
Alignment:
Q  405 ccgacccctgcacaaattatccatggtagctaccaactgaactaca-ctacgggact 460  Q
    ||||||||||| |||||||||  ||||||||||||||||| ||||| ||||||||||    
T  31441318 ccgacccctgcgcaaattatcactggtagctaccaactgagctacacctacgggact 31441262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 34894491 - 34894411
Alignment:
Q  337 tcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  34894491 tcaagtagcctagtggctagagctcacacaatttaactgtggagaagtggggtgtccggggttcgaaccccggcccctgca 34894411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 444
Target Start/End: Complemental strand, 481127 - 481025
Alignment:
Q  342 tagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaa 440  Q
    |||||||||||||| || ||||||| ||||  |||||||||||||||  ||||| ||||||||| || |||||||| ||||||| ||  ||  |||||||    
T  481127 tagcctagtggctaaatctcacaca-attaaatgtggagaagtggggtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtccctaccaa 481029  T
Q  441 ctga 444  Q
    ||||    
T  481028 ctga 481025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 12770453 - 12770402
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| |||||||    
T  12770453 tgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattat 12770402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 1337062 - 1337143
Alignment:
Q  336 gtcaaatagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||||||||||||||||  |||||||  |||  ||||||||||||| |  ||||| |||||||||||| | ||||||    
T  1337062 gtcaaatagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgca 1337143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 5328514 - 5328595
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||| ||  ||||| |||||||||||| ||||||||    
T  5328514 gtcaagtagcctagtggctagagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgca 5328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 8034359 - 8034440
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  || || |||||||||||| ||||||||    
T  8034359 gtcaagtagcctagtggctagaactcacacaatttaattgtggagaagtggggtgtctggtgttcgaaccccggcccctgca 8034440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 17072510 - 17072591
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  | ||| |||||||||||| ||||||||    
T  17072510 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgttcggggttcgaaccccggcccctgca 17072591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 17575761 - 17575680
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  | ||| |||||||||||| ||||||||    
T  17575761 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgttcggggttcgaaccccggcccctgca 17575680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 22274559 - 22274639
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  ||||||| ||||  |||||||||||||||  ||||| |||||||||||| | ||||||    
T  22274559 gtcaagtagcctagtggctagagctcacaca-attaattgtggagaagtggggtgtccggggttcgaaccccggctcctgca 22274639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 29733952 - 29734033
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||| ||||||||| | |||||| |||||||||||||| ||||||    
T  29733952 gtcaagtagcctagtggctagagctcacacaatttaattgtagagaagtggagtatccggggttcgaaccccgactcctgca 29734033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 31450904 - 31450985
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| |  |||||||||||||||||| | ||||||    
T  31450904 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccggctcctgca 31450985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 34873209 - 34873128
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||| ||||||||| ||  |||||||  |||  |||||||||||||||  ||||  |||||||||||||||||||||    
T  34873209 gtcaaatagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgca 34873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 38219515 - 38219596
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| |  ||||| |||||||||||||| ||||||    
T  38219515 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgca 38219596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 42437994 - 42437945
Alignment:
Q  542 aatatttcctataatttaaaattataataactaaatatcatttactaaaa 591  Q
    ||||||| |||| ||||||||||||||||| | ||||| |||||||||||    
T  42437994 aatattttctatcatttaaaattataataatttaatattatttactaaaa 42437945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 2e-39; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 337 - 452
Target Start/End: Original strand, 31351662 - 31351777
Alignment:
Q  337 tcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagcta 436  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  31351662 tcaagtagtctagtggctagattcacacatattatgtgtggagaaatgggaaatccggagttcgaaccccgacccctgcacaaattatctctggtagcta 31351761  T
Q  437 ccaactgaactacact 452  Q
    |||||||| |||||||    
T  31351762 ccaactgagctacact 31351777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 336 - 460
Target Start/End: Original strand, 35010371 - 35010496
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  || |||||    
T  35010371 gtcaagtagcatagtggctagattcatacacattatgtgtggagaagtgggaaatccggagttcgaaccccgactcctgcacaaattatctctgatagct 35010470  T
Q  436 accaactgaactacac-tacgggact 460  Q
    ||||||||| ||| || |||||||||    
T  35010471 accaactgagctaaacttacgggact 35010496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 349 - 452
Target Start/End: Original strand, 35130612 - 35130715
Alignment:
Q  349 gtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaacta 448  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  35130612 gtggctagattcacacacataatgtgtgaagaagtgggaaatccggggttcgaaccccggcccctgcacaaattatctctggtagctaccaactgaacta 35130711  T
Q  449 cact 452  Q
    ||||    
T  35130712 cact 35130715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 336 - 444
Target Start/End: Original strand, 50263978 - 50264085
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||| | ||||||    
T  50263978 gtcaagtagcctagtggctagattcacacacatcatgtgtggagaagtggggaatccgggtttcgagccccggcccctgcacaaattatccct-gtagct 50264076  T
Q  436 accaactga 444  Q
    |||||||||    
T  50264077 accaactga 50264085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 336 - 461
Target Start/End: Original strand, 17882233 - 17882357
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| |||||||||||||| ||||||||||||| ||||||||| | |||||||| |||||||||| | |||||||||||||||||||||  ||||    
T  17882233 gtcaagtagtctagtggctagatttacacacattatgt-tggagaagtagagaatccggggttcgaaccctg-cccctgcacaaattatccatgaaagct 17882330  T
Q  436 accaactgaactacac-tacgggactg 461  Q
    || ||||||||||||| ||||||||||    
T  17882331 actaactgaactacacttacgggactg 17882357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 54733276 - 54733372
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||| | |||||||||| ||| |||||||||| |||| |||||||||||||||||    
T  54733276 tagtggctagattcacacacattatgtgtggagaggtgaggaatccgtaattcgaaccccaaccactgcacaaatgatcc-tggtagctaccaactga 54733372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 7921704 - 7921588
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| |||||||||| |||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||  || ||||||||||| ||  ||||    
T  7921704 gtcaagtagtctagtggctaaattcacacacatgatgtgtggagaagtgaggaatccggcgtttgaaccccgacctttgtacaaattatccctgacagct 7921605  T
Q  436 accaactgaactacact 452  Q
    ||| |||||||||||||    
T  7921604 acctactgaactacact 7921588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 352 - 452
Target Start/End: Original strand, 28091333 - 28091433
Alignment:
Q  352 gctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacac 451  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| | | ||||||| ||||||||  || |||||||||||||| ||||||    
T  28091333 gctagattcacacacattatgtgtggagaagtggggaatttggagttcgaacctcaatccctgcataaattatcactgatagctaccaactgagctacac 28091432  T
Q  452 t 452  Q
    |    
T  28091433 t 28091433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 13538243 - 13538359
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||  || |||||||| ||  ||||| |||||||||||  || |||||    
T  13538243 gtcaagtagtctagtggctagattcacacacattatgtatggagaagtgggaaatttggggttcgaactccagcccctacacaaattatctctgatagct 13538342  T
Q  436 accaactgaactacact 452  Q
    ||||||||| |||||||    
T  13538343 accaactgagctacact 13538359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 49479576 - 49479460
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||||| || ||| |||  |||||||||| |||||| || |||||||   || |||||    
T  49479576 gtcaagtagtctagtggttagattcacacacattatgtgtggagaagttggaaattcgggattcgaacccctacccctacataaattatttctgatagct 49479477  T
Q  436 accaactgaactacact 452  Q
    |||||||||||||||||    
T  49479476 accaactgaactacact 49479460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 38415494 - 38415599
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaac 446  Q
    ||||||||||||||||||||||||||| || |||| ||| ||||  || ||||||| || |||| ||||||||||||||| || |||||||||||||| |    
T  38415494 tagtggctagattcacacacattatgtatgaagaaatggagaatttggggttcgaatcctgacctctgcacaaattatccttgatagctaccaactgagc 38415593  T
Q  447 tacact 452  Q
    ||||||    
T  38415594 tacact 38415599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 337 - 452
Target Start/End: Original strand, 40981775 - 40981890
Alignment:
Q  337 tcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagcta 436  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||||| ||||| |   ||| ||| ||||||||| || ||||||||| || ||||||    
T  40981775 tcaagtagcctagtggttagatttacgcacattatgtgtggagaagtggagaatctgagattcaaactccgacccctacataaattatccctgctagcta 40981874  T
Q  437 ccaactgaactacact 452  Q
    |||||||| |||||||    
T  40981875 ccaactgagctacact 40981890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 452
Target Start/End: Complemental strand, 55967861 - 55967784
Alignment:
Q  375 tggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||||| |||||| |||||| ||| |||||||    
T  55967861 tggagaagtggggaatccggggttcgaaccccggcccctacacaaattatccttggtagttaccaattgagctacact 55967784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 25273057 - 25273172
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    |||| |||| ||||||| ||||||| |||| ||||| | |||||||||||||||||| ||||||||||||  ||||||||||| | ||||| | ||||||    
T  25273057 gtcagatagtctagtggttagattcgcacatattatatatggagaagtggggaatcc-gagttcgaaccctaacccctgcacataatatccctagtagct 25273155  T
Q  436 accaactgaactacact 452  Q
    | ||||||| |||||||    
T  25273156 atcaactgagctacact 25273172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 45333451 - 45333558
Alignment:
Q  347 tagtggctagattcacacacattat--gtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||| ||||||| ||| ||||| || |||||| || ||| ||||||| ||    
T  45333451 tagtggctagattcacacacattatatgtgtggagaagtggggaattcggggtttgaaccccaacctctgcagaagttatccctgatagttaccaacaga 45333550  T
Q  445 actacact 452  Q
     |||||||    
T  45333551 gctacact 45333558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 45341141 - 45341248
Alignment:
Q  347 tagtggctagattcacacacattat--gtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||| ||||||| ||| ||||| || |||||| || ||| ||||||| ||    
T  45341141 tagtggctagattcacacacattatatgtgtggagaagtggggaattcggggtttgaaccccaacctctgcagaagttatccctgatagttaccaacaga 45341240  T
Q  445 actacact 452  Q
     |||||||    
T  45341241 gctacact 45341248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 42657611 - 42657506
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaac 446  Q
    |||||| || |||||||||||||||||||| |||||||| ||||  || |||||||| |||||||||  | ||||||||  || |||||||||||||| |    
T  42657611 tagtggttaaattcacacacattatgtgtgaagaagtggagaatgtggggttcgaactccgacccctatataaattatctctgatagctaccaactgagc 42657512  T
Q  447 tacact 452  Q
    ||||||    
T  42657511 tacact 42657506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 26336848 - 26336955
Alignment:
Q  347 tagtggctagattcacacacattat--gtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    |||||||||||||||||||||||||  |||||||||| |||||||| ||| ||| |||| || ||| ||||| || |||||| |||||| ||||||| ||    
T  26336848 tagtggctagattcacacacattatatgtgtggagaactggggaattcggggtttgaactccaacctctgcagaagttatccctggtagttaccaacaga 26336947  T
Q  445 actacact 452  Q
     |||||||    
T  26336948 gctacact 26336955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 9460270 - 9460176
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaact 442  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||  ||  || ||||||||| |||| |||||||||||  || ||||||||||||    
T  9460270 tagtggctatattcacacacattatgtgtggagaaatggggaatatgggatttgaaccccga-ccctacacaaattatctctgatagctaccaact 9460176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 347 - 434
Target Start/End: Complemental strand, 10601975 - 10601888
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagc 434  Q
    ||||||| | ||||||||| ||||||||| ||||||||||||||| || |||| ||||||||||| |||| ||||||| | |||||||    
T  10601975 tagtggccatattcacacatattatgtgtagagaagtggggaatctggggttcaaaccccgacccttgcaaaaattattcctggtagc 10601888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 414
Target Start/End: Complemental strand, 39691578 - 39691500
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctg 414  Q
    ||||| ||||||||||||| ||||||||||| ||| |  |||||||||||||||||||| | |||||||||| ||||||    
T  39691578 gtcaagtagcctagtggctggattcacacactttaagcatggagaagtggggaatccggggatcgaaccccggcccctg 39691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 12625947 - 12625863
Alignment:
Q  340 aatagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||||| |||||||| ||||  |||||||||||||||  ||||| |||||||| |||||||||||| |||||||    
T  12625947 aatagcctagtggctagagttcacaca-attaaatgtggagaagtggggtgtccggtgttcgaactccgacccctgcataaattat 12625863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 345 - 441
Target Start/End: Original strand, 3746384 - 3746479
Alignment:
Q  345 cctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaac 441  Q
    ||||| ||||||||| ||||||||||| ||||||||| |||| ||||||| ||||||||| | |||||| |||| | ||||  ||||||||||||||    
T  3746384 cctagcggctagatttacacacattatatgtggagaaatgggaaatccggggttcgaacctc-acccctacacataatatctctggtagctaccaac 3746479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 51890915 - 51890831
Alignment:
Q  340 aatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    ||||||||||||||||||  ||||||| ||||  |||||||||||||||  ||||| |||||||||||| |||||||| |||||||    
T  51890915 aatagcctagtggctagagctcacaca-attaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattat 51890831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 23894273 - 23894389
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| |||||||  ||||||||||||||||||| | ||||||| || |||| |  ||||||||||  | |||| |||||||||||| || ||| |    
T  23894273 gtcaagtagtctagtggtcagattcacacacattatgtatagagaagtaggaaatctgaggttcgaaccctaaaccctacacaaattatccgtgatagtt 23894372  T
Q  436 accaactgaactacact 452  Q
    ||||| ||| |||||||    
T  23894373 accaaatgagctacact 23894389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 29406442 - 29406391
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    ||||||||||||||   ||||||||||||||||||||||||||| |||||||    
T  29406442 tgtggagaagtgggttgtccggagttcgaaccccgacccctgcataaattat 29406391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 2222662 - 2222581
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  2222662 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 2222581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 32760764 - 32760684
Alignment:
Q  336 gtcaaatagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||| |||||||||||| |||||||| ||||  ||||||||| |||||  ||||||||||||||||| |||||||||    
T  32760764 gtcaagtagtctagtggctagaattcacaca-attaattgtggagaaatggggtgtccggagttcgaaccccaacccctgca 32760684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 373 - 422
Target Start/End: Original strand, 38848105 - 38848154
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaatt 422  Q
    |||||||||||||||  ||||| ||||||||||||||||||||| |||||    
T  38848105 tgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaatt 38848154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 424
Target Start/End: Complemental strand, 39790186 - 39790110
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    ||||| ||||||||||||  || || |||| |||||||||||||| ||| ||||||| ||||||||| ||||||||||    
T  39790186 tagtgactagattcacacgtataatatgtgaagaagtggggaatctgga-ttcgaacaccgacccctacacaaattat 39790110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 38438367 - 38438435
Alignment:
Q  350 tggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcaca 418  Q
    |||||||||||| ||||||||||| |||||||||||| |||  |||||| ||||| || | ||||||||    
T  38438367 tggctagattcatacacattatgtttggagaagtgggaaatttggagtttgaacctcggctcctgcaca 38438435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 2629664 - 2629613
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  | ||| ||||||||||||||||||||| |||||||    
T  2629664 tgtggagaagtggggtgttcggggttcgaaccccgacccctgcataaattat 2629613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 11294823 - 11294874
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| |||||||    
T  11294823 tgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattat 11294874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 13578450 - 13578493
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||||  ||||| |||||||||||||||||||||    
T  13578450 tgtggagaagtggggtgtccggggttcgaaccccgacccctgca 13578493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 425
Target Start/End: Complemental strand, 19505580 - 19505509
Alignment:
Q  354 tagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatc 425  Q
    |||||||||||||||||||||||||||| ||  ||||| ||  ||| || ||||| ||||||| ||||||||    
T  19505580 tagattcacacacattatgtgtggagaaatgatgaatctgggattcaaatcccgatccctgcataaattatc 19505509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 42134442 - 42134485
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  42134442 tgtggagaagtggggtgtccggagttcgaaccccgacccttgca 42134485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 612
Target Start/End: Complemental strand, 1792152 - 1792070
Alignment:
Q  530 gaagaaaacaaaaatatttcctataatttaaaattataataactaaatatcatttactaaaagtggcagtgaaataaaattta 612  Q
    |||||||| | || ||||| |||| ||| | ||||||||||| ||||| | |||||||||||||| |  ||||||||||||||    
T  1792152 gaagaaaaaataattattttctatcattgacaattataataattaaatcttatttactaaaagtgtcgatgaaataaaattta 1792070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 414
Target Start/End: Complemental strand, 30696798 - 30696764
Alignment:
Q  380 aagtggggaatccggagttcgaaccccgacccctg 414  Q
    ||||||||||||||| |||||||||||||||||||    
T  30696798 aagtggggaatccggggttcgaaccccgacccctg 30696764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 1020203 - 1020158
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaa 381  Q
    ||||| ||||||||||| ||||||||||||| ||| ||||||||||    
T  1020203 gtcaagtagcctagtggttagattcacacactttaagtgtggagaa 1020158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 3036002 - 3036083
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| ||||||||| || ||||||||    
T  3036002 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaacctcggcccctgca 3036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 10402564 - 10402483
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||| ||  ||||| |||||||| ||||||||||||    
T  10402564 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaactccgacccctgca 10402483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 30057345 - 30057264
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||| ||||  |||||||  |||  |||||||||||||||  ||||| ||| |||||||||||||||||    
T  30057345 gtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggggtgtccggggtttgaaccccgacccctgca 30057264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 42721498 - 42721538
Alignment:
Q  347 tagtggctagattcacacacat--tatgtgtggagaagtgg 385  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  42721498 tagtggctagattcacacacattatatgtgtggagaagtgg 42721538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 48950907 - 48950826
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| |  ||||| |||||||||||||| ||||||    
T  48950907 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgca 48950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 49901605 - 49901524
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||| ||||  ||||| |||||||||||| ||||||||    
T  49901605 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagcggggtgtccggggttcgaaccccggcccctgca 49901524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 1e-37; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 31068881 - 31068997
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| ||| |||||    
T  31068881 gtcaaatagtctagtggttagattcacacacattaagtgtggagaagtggggaatccggagttcaaactccgacccctacacaaattatcaatgttagct 31068980  T
Q  436 accaactgaactacact 452  Q
    ||||||||| |||||||    
T  31068981 accaactgagctacact 31068997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 337 - 442
Target Start/End: Original strand, 14368405 - 14368510
Alignment:
Q  337 tcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagcta 436  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||  | |||||||||||||||||||    
T  14368405 tcaaatagtttagtggctagattcacacacattatgtgtggagaagtggggaatccgtggttcgaaccccaacccctatataaattatccatggtagcta 14368504  T
Q  437 ccaact 442  Q
    ||||||    
T  14368505 ccaact 14368510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 342 - 428
Target Start/End: Complemental strand, 44287905 - 44287819
Alignment:
Q  342 tagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccat 428  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||    
T  44287905 tagcctattggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaatcccaacctctgcacaaattgtccat 44287819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 336 - 444
Target Start/End: Original strand, 34319803 - 34319911
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||| | ||| ||| || | |||||||||||||||||| || |||||    
T  34319803 gtcaagtagtctagtggctagattcacacacattatgtgtagagaagtgaggaatccagggttagaatcctggcccctgcacaaattatccctgatagct 34319902  T
Q  436 accaactga 444  Q
    |||||||||    
T  34319903 accaactga 34319911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 337 - 453
Target Start/End: Complemental strand, 37123675 - 37123559
Alignment:
Q  337 tcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagcta 436  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| | |||  || ||||||| ||||| |||| |||||||||||| || || |||    
T  37123675 tcaagtagtctagtggctagattcacacacattatgtgtggagaagtgagaaatttggggttcgaatcccgaaccctacacaaattatccctgataacta 37123576  T
Q  437 ccaactgaactacacta 453  Q
    | |||||||||||||||    
T  37123575 ctaactgaactacacta 37123559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 346 - 452
Target Start/End: Complemental strand, 8915674 - 8915568
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaa 445  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||| |||| | ||||||||||   || |||||||||||||||    
T  8915674 ctagtggctagattcacacacattatttatggagaagtggggaatccggggtacgaaccccaacccattcacaaattatttctgatagctaccaactgaa 8915575  T
Q  446 ctacact 452  Q
    || ||||    
T  8915574 cttcact 8915568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 9198919 - 9199034
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaacccc-gacccctgcacaaattatccatggtagc 434  Q
    ||||| |||||| ||||||| |||||||  ||||||||||||||||||||| ||| ||  ||||||||||| | || ||||||||||||||  |||||||    
T  9198919 gtcaagtagcctcgtggctaaattcaca--cattatgtgtggagaagtgggaaattcgaggttcgaaccccagcccgctgcacaaattatctctggtagc 9199016  T
Q  435 taccaactgaactacact 452  Q
    |||||||||| |||||||    
T  9199017 taccaactgagctacact 9199034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 354 - 439
Target Start/End: Original strand, 9932020 - 9932105
Alignment:
Q  354 tagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctacca 439  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||  ||| || ||| ||||||||||| | ||||||||||    
T  9932020 tagattcacacacattatatgtggagaagtggggaatccggggttcgaattccggccactgtacaaattatcccttgtagctacca 9932105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 32087342 - 32087439
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaac 446  Q
    ||||||||||||||||||||||||||||| |        ||||| ||||||||||||||||| | || |||||||||||| ||||||||| |||||||||    
T  32087342 tagtggctagattcacacacattatgtgtag--------ggaattcggagttcgaaccccgatctctacacaaattatccctggtagctatcaactgaac 32087433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 23948690 - 23948758
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccg 407  Q
    ||||| ||||||||||||| ||||||||||||||||||||   |||||||||||||||| ||||||||||||    
T  23948690 gtcaagtagcctagtggcttgattcacacacattatgtgt---gaagtggggaatccggggttcgaaccccg 23948758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 354 - 452
Target Start/End: Complemental strand, 34028191 - 34028101
Alignment:
Q  354 tagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    ||||||||||||||||||||||||||||        |||||||||| ||| |||||||||||| ||||||||| |||||||||| |||||| |||||||    
T  34028191 tagattcacacacattatgtgtggagaa--------tccggagttcaaactccgacccctgcaaaaattatccctggtagctactaactgagctacact 34028101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 452
Target Start/End: Original strand, 9294131 - 9294225
Alignment:
Q  357 attcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    ||||||||||||||||||||||||||||| |||| | | |||| ||| |||||||||||| ||||||||  || | ||||| ||||||||||||||    
T  9294131 attcacacacattatgtgtggagaagtggtgaattcag-gttcaaactccgacccctgcagaaattatctctgatggctacaaactgaactacact 9294225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 20157013 - 20156924
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    ||||| |||||||||||||||||||||||||||||        ||||  |||| ||| |||||||||||| ||||||||| |||||||||||||||||    
T  20157013 tagtgtctagattcacacacattatgtgtggagaa--------tccgatgttcaaacaccgacccctgcaaaaattatccctggtagctaccaactga 20156924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 21297471 - 21297412
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggta 432  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||| ||| |||||    
T  21297471 tgtggagaagtggggaatccgaggttcgaaccccggcccctgcacaaattttccctggta 21297412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 29696967 - 29697035
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaacc 404  Q
    ||||| ||||||||| |||| ||||||||||||| | |||||||||||| ||||| || ||||||||||    
T  29696967 gtcaagtagcctagtagctacattcacacacattgtatgtggagaagtgaggaattcgaagttcgaacc 29697035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 342 - 386
Target Start/End: Original strand, 38690791 - 38690835
Alignment:
Q  342 tagcctagtggctagattcacacacattatgtgtggagaagtggg 386  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||    
T  38690791 tagcctagtggctagattcacatacattatatgtggagaagtggg 38690835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 3596335 - 3596284
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  ||||| ||||||||||||||||||||| |||||||    
T  3596335 tgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaattat 3596284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 33228880 - 33228961
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  33228880 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 33228961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 11997724 - 11997617
Alignment:
Q  347 tagtggctagattcacacacattatgt--gtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    |||| |||||||||||||||||||| |  |||||||||||||||||  |||||| ||| ||| ||| | | | || |||||| |||||| ||||||| ||    
T  11997724 tagtagctagattcacacacattatatatgtggagaagtggggaatttggagtttgaatcccaacctccgtagaagttatccctggtagttaccaacaga 11997625  T
Q  445 actacact 452  Q
     |||||||    
T  11997624 gctacact 11997617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 17777148 - 17777191
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||||  ||||| |||||||||||||||||||||    
T  17777148 tgtggagaagtggggtgtccggggttcgaaccccgacccctgca 17777191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 336 - 418
Target Start/End: Complemental strand, 44831526 - 44831444
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcaca 418  Q
    |||||||| |||||||||||||||||||  |||||||| || | || |||| |||| |  ||| ||||||||||| |||||||    
T  44831526 gtcaaataacctagtggctagattcacatgcattatgtatgaaaaaatgggaaatctgtggtttgaaccccgacctctgcaca 44831444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 1844940 - 1844859
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||  |||||||||||| ||||||||    
T  1844940 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccggcccctgca 1844859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 3287004 - 3287084
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||| ||||||||||||  ||||||| ||||  ||||||||||||| | |||||| |||||||||||| ||||||||    
T  3287004 gtcaagtagtctagtggctagagctcacaca-attaaatgtggagaagtggagtatccggggttcgaaccccggcccctgca 3287084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 3439071 - 3438990
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||| ||||||||||||  |||||||  |||  ||||||||||||| |  ||||| |||||||||||||| ||||||    
T  3439071 gtcaaatagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgca 3438990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 4183299 - 4183218
Alignment:
Q  336 gtcaaatagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| |||||||||||||||| ||||||||  |||  ||||||||||||| |  | ||| |||||||||||||| ||||||    
T  4183299 gtcaagtagcctagtggctagagttcacacaatttaattgtggagaagtggagtgttcggggttcgaaccccgactcctgca 4183218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 28194755 - 28194674
Alignment:
Q  336 gtcaaatagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||| ||  ||||||||    
T  28194755 gtcaaatagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaactccagcccctgca 28194674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 40535396 - 40535477
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| |  ||||| |||||||||||| ||||||||    
T  40535396 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggcccctgca 40535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 23198513 - 23198628
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||| || |||||    
T  23198513 gtcaaatagcctagtggctagatttacacacattatgtgtggagaagtggggaat-cggggtttgaaccccaacccctgcacaaattatccttgatagct 23198611  T
Q  436 accaactgaactacact 452  Q
    | ||||||| |||||||    
T  23198612 atcaactgagctacact 23198628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 336 - 464
Target Start/End: Original strand, 47684475 - 47684604
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| ||| |||||||||||||||||||||||| ||||||||| || ||||||| |||| |||||| ||||||||||||||||||| |||||||     
T  47684475 gtcaagtagtctattggctagattcacacacattatgtatggagaagtaggaaatccggggttcaaaccccaacccctgcacaaattatccttggtagcc 47684574  T
Q  436 accaactgaactaca-ctacgggactgaaa 464  Q
     |||||||| ||||| ||||||||| ||||    
T  47684575 cccaactgagctacacctacgggacggaaa 47684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 336 - 444
Target Start/End: Complemental strand, 25091280 - 25091173
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| ||||||||||||||||||||||||||||||| |||||||   |||| |||||| ||||| ||||||||||||||||||||| ||||||||    
T  25091280 gtcaagtagtctagtggctagattcacacacattatgtgtgaagaagtgaa-aatctggagtttgaacctcgacccctgcacaaattatccctggtagct 25091182  T
Q  436 accaactga 444  Q
    |||||||||    
T  25091181 accaactga 25091173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 341 - 412
Target Start/End: Complemental strand, 37307774 - 37307703
Alignment:
Q  341 atagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccc 412  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37307774 atagcctagtggctagattcaaacacattatttgtggagaagtggggaatccggagttcgaaccccgacccc 37307703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 342 - 460
Target Start/End: Original strand, 45967355 - 45967474
Alignment:
Q  342 tagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaac 441  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||| |||||||||||||||| || ||| | ||||||  ||||||||||||    
T  45967355 tagcctagtggctagattcacacacattatgtgtgaaaaagtgaggaattcggggttcgaaccccgacccatgtacataatatccactgtagctaccaac 45967454  T
Q  442 tgaactacac-tacgggact 460  Q
    ||| |||||| |||||||||    
T  45967455 tgagctacacttacgggact 45967474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 346 - 444
Target Start/End: Complemental strand, 23982125 - 23982027
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    |||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||| |  ||| ||||||||||||||| |||||||||||||||||    
T  23982125 ctagtggctagattcacacacattatgtgcagagaaatggagaatccggagttcgaactctaacctctgcacaaattatccctggtagctaccaactga 23982027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 336 - 440
Target Start/End: Complemental strand, 13054714 - 13054611
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||||| |||| || |||||||||||| |||||||||| ||| ||| ||||||||    
T  13054714 gtcaaatagcttagtg-ctagattcgcacacattatgtgtggagaagtgggaaatctggggttcgaaccccggcccctgcacatattttccctggtagct 13054616  T
Q  436 accaa 440  Q
    |||||    
T  13054615 accaa 13054611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 444
Target Start/End: Original strand, 36876997 - 36877068
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36876997 tgtggagaagtgggaaatccggggttcgaaccccgacccctgcacaaattatccatgttagctaccaactga 36877068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 336 - 441
Target Start/End: Complemental strand, 41780579 - 41780475
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||| |   |||||||||| |||||| |||||||||||||||| |||||    
T  41780579 gtcaagtagcctagtggttagattcacacacattatgtgtgtagaagtgaggaattc-ttgttcgaaccctgaccccggcacaaattatccatgatagct 41780481  T
Q  436 accaac 441  Q
    ||||||    
T  41780480 accaac 41780475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 27227252 - 27227368
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| ||  |||||| | | ||||||  ||||||||||  |||||| |    
T  27227252 gtcaagtagtctagtggctagattcaaacacattatgtgtggagaagtggggaatctgggattcgaaacacaacccctatacaaattatctctggtaggt 27227351  T
Q  436 accaactgaactacact 452  Q
    ||||||||| |||||||    
T  27227352 accaactgagctacact 27227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 24250139 - 24250242
Alignment:
Q  341 atagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaa 440  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||||| | |||||||| ||  |||||||||| | | | |||||||||||||||    
T  24250139 atagcctagtgactagattcacacacattatgtgtggaaaagtggagaatccagggttcgaacacccgcccctgcacataatgttcatggtagctaccaa 24250238  T
Q  441 ctga 444  Q
    ||||    
T  24250239 ctga 24250242  T

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Target: chr7; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 1998855 - 1998921
Alignment:
Q  16 caaacagta-ggttgttgaagttgtacgtgaaaacccttcgaactttttgtggaagaaaccctagaa 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1998855 caaacagtacggttgttgaagttgtacgtgaaaacccttcgaacttttcgtggaagaaaccctagaa 1998921  T

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Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 350 - 452
Target Start/End: Complemental strand, 32958595 - 32958493
Alignment:
Q  350 tggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactac 449  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||| |||||||| | ||| ||||||||||||||   |||||||||||||| || ||||    
T  32958595 tggctagattcacacacattaagtgtggataagtggagaatccggggttcgaactctgactcctgcacaaattatttttggtagctaccaaccgagctac 32958496  T
Q  450 act 452  Q
    |||    
T  32958495 act 32958493  T

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Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 9667219 - 9667335
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| ||||||||| |||||||||||||||||| |||||||||||| |||  || |||||||| ||  ||||| |||||||||||  || |||||    
T  9667219 gtcaagtagtctagtggctggattcacacacattatgtatggagaagtgggaaatttggggttcgaactccagcccctacacaaattatctctgatagct 9667318  T
Q  436 accaactgaactacact 452  Q
    ||||||||| |||||||    
T  9667319 accaactgagctacact 9667335  T

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Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 27744698 - 27744583
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    |||||||||  |||||| || |||||||||||||||||||||||||||||||||||||  ||||||| | | | ||||||||||||||||  || |||||    
T  27744698 gtcaaatagtttagtggttaaattcacacacattatgtgtggagaagtggggaatccgatgttcgaa-ctctaaccctgcacaaattatctctgatagct 27744600  T
Q  436 accaactgaactacact 452  Q
    | ||||||  |||||||    
T  27744599 atcaactgcgctacact 27744583  T

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Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 444
Target Start/End: Original strand, 5808398 - 5808480
Alignment:
Q  362 cacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |   ||| || ||||||||||||||    
T  5808398 cacacattatgtgtggagaagtgaggaatccggggttcgaaccccaacccctgcacataaagtccttgatagctaccaactga 5808480  T

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Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 336 - 425
Target Start/End: Original strand, 45725111 - 45725200
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatc 425  Q
    ||||| |||||||||||||||||| ||| ||||||||||| |||||||| | ||| ||   |||||| ||||||||||||||||||||||    
T  45725111 gtcaagtagcctagtggctagatttacatacattatgtgtagagaagtgagtaattcgagattcgaatcccgacccctgcacaaattatc 45725200  T

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Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 355 - 444
Target Start/End: Original strand, 44165893 - 44165983
Alignment:
Q  355 agattcacacacattatgtgtggagaagt-ggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    ||||||||||||||||||||||||||||| ||||||| |   ||||||| ||||| |  |||| ||||||||| |||||||||||||||||    
T  44165893 agattcacacacattatgtgtggagaagtgggggaattcaaggttcgaatcccgatctttgcataaattatccctggtagctaccaactga 44165983  T

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Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 374 - 452
Target Start/End: Complemental strand, 19554788 - 19554710
Alignment:
Q  374 gtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    ||||||||| ||||||||| |  |||||||| ||||||||||| | ||| ||| ||||||||||||||||| |||||||    
T  19554788 gtggagaagcggggaatccagttttcgaaccacgacccctgcaaatattgtccttggtagctaccaactgagctacact 19554710  T

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Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 39584248 - 39584301
Alignment:
Q  342 tagcctagtggctagattcacacacattatgtgtggagaagtggggaatccgga 395  Q
    |||| ||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  39584248 tagcttagtggctagactcacacatattatgtgtggagaagcggggaatccgga 39584301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 342 - 424
Target Start/End: Complemental strand, 4886954 - 4886873
Alignment:
Q  342 tagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||| ||||| |||||||| ||||| |||||||||||||||  |||||| ||||||||||||||| |||| |||||||    
T  4886954 tagcctagtgtctagagttcacaca-attatatgtggagaagtggggtgtccgga-ttcgaaccccgacccttgcataaattat 4886873  T

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Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 41331064 - 41331115
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  |||||| |||||||||||||||||||| |||||||    
T  41331064 tgtggagaagtggggtgtccggaattcgaaccccgacccctgcataaattat 41331115  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 7836888 - 7836972
Alignment:
Q  340 aatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    ||||||||||||||||||  ||||||| ||||  ||||||||||||| |  | ||||||||||||||||| ||||||| |||||||    
T  7836888 aatagcctagtggctagagctcacaca-attaaatgtggagaagtggtgtgttcggagttcgaaccccgatccctgcataaattat 7836972  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 32047212 - 32047131
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||||||||||||||||  |||||||  |||  |||||||||||| ||  ||||| |||||||||||| ||||||||    
T  32047212 gtcaaatagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgca 32047131  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 43119379 - 43119460
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||| | |||||||||||||||||||||    
T  43119379 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccagggttcgaaccccgacccctgca 43119460  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 7683487 - 7683451
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagt 383  Q
    |||||| ||||||||||||||||||||||||||||||    
T  7683487 tagtggttagattcacacacattatgtgtggagaagt 7683451  T

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Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 41465939 - 41465876
Alignment:
Q  352 gctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||| |||||| |||||  |||||||||||||||  |||||||||||||||| ||||||||||    
T  41465939 gctagagtcacac-cattaaatgtggagaagtggggtgtccggagttcgaaccctgacccctgca 41465876  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 9712183 - 9712226
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||||  ||||| |||||||||||||||||||||    
T  9712183 tgtggagaagtggggtgtccggggttcgaaccccgacccctgca 9712226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 23102511 - 23102586
Alignment:
Q  342 tagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  23102511 tagcctagtggctagaactcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 23102586  T

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Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 405
Target Start/End: Complemental strand, 27731401 - 27731343
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccc 405  Q
    ||||||| |||| | |||||| ||| ||||||||||||||||||||| ||||||||||||    
T  27731401 ctagtgggtagactaacacaccttaagtgtggagaagtggggaatcc-gagttcgaaccc 27731343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 35683112 - 35683155
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||||||| |  |||||||||||||||||||||||||||    
T  35683112 tgtggagaagtggagtgtccggagttcgaaccccgacccctgca 35683155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 37411722 - 37411773
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  |||||||||| ||| |||||||||||| |||||||    
T  37411722 tgtggagaagtggggtgtccggagttcaaactccgacccctgcataaattat 37411773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 424
Target Start/End: Original strand, 45284808 - 45284855
Alignment:
Q  377 gagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||  ||||| ||||||||||||||||||||| |||||||    
T  45284808 gagaagtggggtgtccggggttcgaaccccgacccctgcataaattat 45284855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 46758327 - 46758284
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||| |||||||  |||||||||||||||||||||||||||    
T  46758327 tgtggaggagtggggtgtccggagttcgaaccccgacccctgca 46758284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 343 - 416
Target Start/End: Original strand, 9877221 - 9877295
Alignment:
Q  343 agcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  9877221 agcctagtggctagaactcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 9877295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 346 - 384
Target Start/End: Original strand, 30745961 - 30745999
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtg 384  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  30745961 ctagtggctagactcacgcacattatgtgtggagaagtg 30745999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 12772238 - 12772157
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  | ||||||||||| | |||||| |||||||||||||| ||||||    
T  12772238 gtcaagtagcctagtggctagagctcacacaatttaattatggagaagtggagtatccggggttcgaaccccgactcctgca 12772157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 24781153 - 24781072
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| | |||||| |||||||||||| | ||||||    
T  24781153 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtatccggggttcgaaccccggctcctgca 24781072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 27424961 - 27424881
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  ||||||| ||||  ||||||||||||| | |||||  |||||||||||| ||||||||    
T  27424961 gtcaagtagcctagtggctagagctcacaca-attaaatgtggagaagtggagtatccgaggttcgaaccccggcccctgca 27424881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 416
Target Start/End: Complemental strand, 34891289 - 34891248
Alignment:
Q  375 tggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||  |||||||||||||||||| ||||||||    
T  34891289 tggagaagtggggtgtccggagttcgaaccccggcccctgca 34891248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 35950251 - 35950170
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| |  ||||| |||||||||||||| ||||||    
T  35950251 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgca 35950170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 452
Target Start/End: Original strand, 38524864 - 38524937
Alignment:
Q  379 gaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    |||||||| ||||||  ||||||| |||||| ||||||||||||||   ||||| ||||||||| | |||||||    
T  38524864 gaagtgggtaatccgcggttcgaagcccgactcctgcacaaattatatctggtaactaccaactaagctacact 38524937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 9e-32; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 336 - 442
Target Start/End: Original strand, 38745281 - 38745387
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||| |     
T  38745281 gtcaagtagtctagtggctagattcacacacattttgtgtggagaagtggggaattcggggttcgaatcccgacccctgcacaaattatccctggtaacc 38745380  T
Q  436 accaact 442  Q
    |||||||    
T  38745381 accaact 38745387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 336 - 426
Target Start/End: Original strand, 41259941 - 41260031
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatcc 426  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||| ||||||||||||    
T  41259941 gtcaagtagcctagtggctagattcacacacattatgtgtggagaagtggggaattcgggggtcgaaccccggcccctacacaaattatcc 41260031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 346 - 450
Target Start/End: Complemental strand, 54240714 - 54240610
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaa 445  Q
    ||||||| ||||||||||||||||||| ||||||||||||  ||||||  ||||||||||||||||||||||| ||| ||| |||||||| ||||||||     
T  54240714 ctagtggttagattcacacacattatgcgtggagaagtggaaaatccgaggttcgaaccccgacccctgcacatattgtccttggtagctgccaactgag 54240615  T
Q  446 ctaca 450  Q
    |||||    
T  54240614 ctaca 54240610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 356 - 449
Target Start/End: Complemental strand, 17002996 - 17002906
Alignment:
Q  356 gattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactac 449  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||  |||||| ||||||||||| ||||||||||||||||| ||||    
T  17002996 gattcacacacattatgtgtggagaagtggggaatcc---gttcgaaccccagcccctgtacaaattatccctggtagctaccaactgagctac 17002906  T

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Target: chr3; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 51829556 - 51829660
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaac 446  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| || |||||||| ||  | ||||||||||| |||| ||||||||||||||||| |    
T  51829556 tagtggctagattcacatacattatgtgtggagaagtgaggaatctggggttcgaacaccagctcctgcacaaatgatcc-tggtagctaccaactgagc 51829654  T
Q  447 tacact 452  Q
    ||||||    
T  51829655 tacact 51829660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 439
Target Start/End: Complemental strand, 6757354 - 6757254
Alignment:
Q  339 aaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctacc 438  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| | ||||  | |||| |||| | ||| ||||||||||||||| || ||||||||    
T  6757354 aaatagcctagtggctagatttacacacattatgtgtggaaaagtgagaaatctagggttcaaacctcaaccactgcacaaattatccttgatagctacc 6757255  T
Q  439 a 439  Q
    |    
T  6757254 a 6757254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 459
Target Start/End: Original strand, 9737564 - 9737688
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||||||||||| || ||||||||||||||||||| ||||| | |  ||| ||  |||||||||| |||||||||||| | ||||  ||||||||    
T  9737564 gtcaattagcctagtggttatattcacacacattatgtgtagagaaatagaaaattcgaggttcgaaccctgacccctgcacataatatctctggtagct 9737663  T
Q  436 accaactgaactaca-ctacgggac 459  Q
    ||||||||| ||||| |||||||||    
T  9737664 accaactgagctacatctacgggac 9737688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 452
Target Start/End: Original strand, 27100918 - 27101016
Alignment:
Q  354 tagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    |||||| | |||||||||||||||| ||||||| |||| |||||||||||||||| |||||||||| | |||  || |||||| |||||||| ||||||    
T  27100918 tagatttaaacacattatgtgtggaaaagtgggaaatctggagttcgaaccccgatccctgcacaagtcatcactgatagctaacaactgaaatacact 27101016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 11988919 - 11988971
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtgggga 388  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  11988919 gtcaattagtctagtggctagattcacacacattatgtgtggagaagtgggga 11988971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 346 - 452
Target Start/End: Complemental strand, 32594671 - 32594568
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaa 445  Q
    |||||||||||||||||||| ||||||| |||||   |||| ||| ||| ||||||||||||||| || |||||||||| | |  || ||||||||||||    
T  32594671 ctagtggctagattcacacatattatgtatggag---tgggaaattcggggttcgaaccccgaccactacacaaattattcctattaactaccaactgaa 32594575  T
Q  446 ctacact 452  Q
    |||||||    
T  32594574 ctacact 32594568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 348 - 446
Target Start/End: Original strand, 36786572 - 36786672
Alignment:
Q  348 agtggctagattcacacacattatgtgtggagaag-tggggaatccggagttcgaa-ccccgacccctgcacaaattatccatggtagctaccaactgaa 445  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||  ||||||| |||| |||||| || ||||||||| |  |||||||||| ||||    
T  36786572 agtggctagattcacacatattatgtgtggagaagttggggaatccgaggttcgaacccccaacccctacaaaaattatccctattagctaccaagtgaa 36786671  T
Q  446 c 446  Q
    |    
T  36786672 c 36786672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 55009622 - 55009526
Alignment:
Q  356 gattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    |||||||||||||||||| |||||||||| | ||||||| ||||||||||||  | || |||||||||||| |  |||||||||| ||| |||||||    
T  55009622 gattcacacacattatgtatggagaagtgagaaatccggggttcgaaccccggtctctacacaaattatccctaatagctaccaattgagctacact 55009526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 341 - 452
Target Start/End: Complemental strand, 33440091 - 33439980
Alignment:
Q  341 atagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaa 440  Q
    |||| ||||||| ||||||||||||||||||||||| | | ||||  ||| |||| ||| ||||||||||||| ||||||||||   || ||||||||||    
T  33440091 atagtctagtggttagattcacacacattatgtgtgaaaaggtggaaaattcggaattcaaaccccgacccctacacaaattatttctgatagctaccaa 33439992  T
Q  441 ctgaactacact 452  Q
     ||| |||||||    
T  33439991 gtgagctacact 33439980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 35381811 - 35381872
Alignment:
Q  342 tagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaac 403  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||| | ||||||||||    
T  35381811 tagcctagtgactagattcacacgcattatgtgtgaagaagtggggaattcagagttcgaac 35381872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 352 - 452
Target Start/End: Original strand, 21892527 - 21892626
Alignment:
Q  352 gctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacac 451  Q
    |||||||||||||| | || |||||||||||||||||||  || ||||||||||||| |||| || ||||||||  |||||| || ||||||| ||||||    
T  21892527 gctagattcacacataataagtgtggagaagtggggaatttgg-gttcgaaccccgatccctccataaattatctctggtagttatcaactgagctacac 21892625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 52910386 - 52910430
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaat 390  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  52910386 ctagtgactagattcacacacattatgtgtggagaagtggggaat 52910430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 444
Target Start/End: Original strand, 21177040 - 21177130
Alignment:
Q  353 ctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    ||||||| |||||||||||||||||||||||||||||| ||  ||||||||   || ||||| ||||||| ||  |||||||||||||||||    
T  21177040 ctagatttacacacattatgtgtggagaagtggggaattcgaggttcgaactttga-ccctgtacaaattgtctctggtagctaccaactga 21177130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 442
Target Start/End: Complemental strand, 49285080 - 49284975
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| |||||||||| || |||||||||||||||  | ||||||||| ||| |||| | ||| ||| |||  |||||||||||||||||  ||||||||    
T  49285080 gtcaagtagcctagtgacttgattcacacacattaaatatggagaagt-gggtatccagggtttgaatcccagcccctgcacaaattatctctggtagct 49284982  T
Q  436 accaact 442  Q
    |||||||    
T  49284981 accaact 49284975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 375 - 444
Target Start/End: Original strand, 4227731 - 4227800
Alignment:
Q  375 tggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||||| ||  ||  |||||||||||    
T  4227731 tggagaagtggggtgtccggagttcgaaccccgacccctgcataaattatgcaatgtccctaccaactga 4227800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 24303508 - 24303424
Alignment:
Q  340 aatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    ||||||||||||||||||  ||||||| ||||  |||||||||||||||  ||||| |||||||||||| |||||||| |||||||    
T  24303508 aatagcctagtggctagagctcacaca-attaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattat 24303424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 48120349 - 48120395
Alignment:
Q  396 gttcgaaccccgacccctgcacaaattatccatggtagctaccaact 442  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||    
T  48120349 gttcgaaccccgacccctatacaaattatccatggtagctacgaact 48120395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 25883935 - 25884016
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||| ||  |||||||  |||  |||||||||||||||  ||||| |||||||||||||||||||||    
T  25883935 gtcaagtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgca 25884016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 39720058 - 39719977
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  39720058 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 39719977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 41936354 - 41936435
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  41936354 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 41936435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 53432684 - 53432765
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  53432684 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 53432765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 346 - 406
Target Start/End: Complemental strand, 50959095 - 50959036
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaacccc 406  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||| ||  ||||||||||    
T  50959095 ctagtggcgagattcacacacaatatg-gtggagaagtggggaatctgggattcgaacccc 50959036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 19222571 - 19222622
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| |||||||    
T  19222571 tgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattat 19222622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 26880262 - 26880211
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  || | |||||||||||||||||||||| |||||||    
T  26880262 tgtggagaagtggggtgtctgaagttcgaaccccgacccctgcataaattat 26880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 452
Target Start/End: Original strand, 35962944 - 35962983
Alignment:
Q  413 tgcacaaattatccatggtagctaccaactgaactacact 452  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  35962944 tgcacaaattattcatggtagctaccaactgacctacact 35962983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 424
Target Start/End: Original strand, 48515339 - 48515421
Alignment:
Q  342 tagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||| ||||||||  |||  |||||||||||| ||  ||||| ||||||||| ||||||||||| |||||||    
T  48515339 tagcctagtggctagagttcacacat-ttaaatgtggagaagtgtggtgtccggggttcgaacctcgacccctgcataaattat 48515421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 351 - 437
Target Start/End: Original strand, 6459197 - 6459283
Alignment:
Q  351 ggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctac 437  Q
    ||||||||| ||||||||||||| |||| |||||   |||| || |||| |||||| |||  |||||||||||||| | ||||||||    
T  6459197 ggctagatttacacacattatgtatggaaaagtgaaaaatctggggttcaaaccccaaccattgcacaaattatccttagtagctac 6459283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 364 - 406
Target Start/End: Original strand, 35960331 - 35960373
Alignment:
Q  364 cacattatgtgtggagaagtggggaatccggagttcgaacccc 406  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||    
T  35960331 cacattatgtgtgaagaagtggggaatccggggttcaaacccc 35960373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 416
Target Start/End: Original strand, 32732524 - 32732565
Alignment:
Q  375 tggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||||| |  |||||||||||||||||||||||||||    
T  32732524 tggagaagtggagtgtccggagttcgaaccccgacccctgca 32732565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 34102558 - 34102639
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| || |||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  34102558 gtcaagtaacctagtggctagagctcacacagtttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 34102639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 37488407 - 37488488
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| |  ||||| |||||||||||| ||||||||    
T  37488407 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggcccctgca 37488488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 44651930 - 44651998
Alignment:
Q  336 gtcaaatagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaacc 404  Q
    ||||| |||||||||||||||| |||||||| || |  ||||||||||||||| |||||| |||||||||    
T  44651930 gtcaagtagcctagtggctagagttcacacatataaa-tgtggagaagtggggtatccggggttcgaacc 44651998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 45701467 - 45701386
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| | |||||| |||||||||||| | ||||||    
T  45701467 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtatccggggttcgaaccccggctcctgca 45701386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 9e-29; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 30327764 - 30327659
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaac 446  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||| |||||||| ||||||||  || |||||||||||||| |    
T  30327764 tagtggctagattcacacatattatgtgtggagaagtggcgaattcggggttcgaaccccggcccctgcataaattatctctgatagctaccaactgagc 30327665  T
Q  447 tacact 452  Q
    ||||||    
T  30327664 tacact 30327659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 336 - 448
Target Start/End: Complemental strand, 24793594 - 24793482
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| |||||||||||||||||| ||||||||||| ||||| |||| |||| || ||||| ||||||||||||||||||||||||  || |||||    
T  24793594 gtcaagtagtctagtggctagattcacatacattatgtgtagagaaatgggaaatctggggttcggaccccgacccctgcacaaattatctctgatagct 24793495  T
Q  436 accaactgaacta 448  Q
    |||||||||||||    
T  24793494 accaactgaacta 24793482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 43405992 - 43406108
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| ||||||| |||| ||||||||||||||||||||||||||| ||||| |  |||||||| |||  || |||||||||||||  ||||||||    
T  43405992 gtcaattagtctagtggttagactcacacacattatgtgtggagaagtggagaatctgaggttcgaactccggtccttgcacaaattatctctggtagct 43406091  T
Q  436 accaactgaactacact 452  Q
    ||||||||| |||||||    
T  43406092 accaactgagctacact 43406108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 448
Target Start/End: Complemental strand, 28282455 - 28282343
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| ||||||| |||||||||||| |||||||||||||||||| ||||| ||  ||| ||| | |||||||| |||||||||||  | ||||||    
T  28282455 gtcaagtagtctagtggttagattcacacatattatgtgtggagaagtgaggaatacgaggtttgaatctcgacccctccacaaattatctctagtagct 28282356  T
Q  436 accaactgaacta 448  Q
    |||||||||||||    
T  28282355 accaactgaacta 28282343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 344 - 459
Target Start/End: Original strand, 31478684 - 31478800
Alignment:
Q  344 gcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactg 443  Q
    ||||| || ||||||||||||||||||||||| ||||||||| ||||||| ||||||||| ||| ||| |||||||||||||   ||| |||||||| ||    
T  31478684 gcctaatgactagattcacacacattatgtgtagagaagtggagaatccgaagttcgaactccggcccttgcacaaattatctccggtggctaccaattg 31478783  T
Q  444 aactacac-tacgggac 459  Q
    | |||||| ||||||||    
T  31478784 agctacacatacgggac 31478800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 8032970 - 8032893
Alignment:
Q  345 cctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaatt 422  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||  || ||||||| ||| |||||||||||||||    
T  8032970 cctagtggctaaattcacacacattatgtgtggagatgtggagaatttggggttcgaatcccaacccctgcacaaatt 8032893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 353 - 418
Target Start/End: Complemental strand, 32398319 - 32398254
Alignment:
Q  353 ctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcaca 418  Q
    ||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||| ||||||||    
T  32398319 ctagattcacatacattatgtgtggagaagtggggaatacgttgttcgaaccccgactcctgcaca 32398254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 15409272 - 15409156
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat-ccatggtagc 434  Q
    ||||| ||| |||||||||| |||||||||||||||||||  |||||||||||||| ||  ||| |||||||  |||| |||||||||| || |  ||||    
T  15409272 gtcaagtagtctagtggctaaattcacacacattatgtgtaaagaagtggggaatctgggattcaaaccccg-gccctacacaaattatcccttaatagc 15409174  T
Q  435 taccaactgaactacact 452  Q
    |||||||||| |||||||    
T  15409173 taccaactgagctacact 15409156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 349 - 450
Target Start/End: Complemental strand, 20706612 - 20706511
Alignment:
Q  349 gtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaacta 448  Q
    |||| ||||||||||||||||| ||||||||||||||  ||||    |||| ||||  |||| ||||||||||||||  ||||||||||||||||| |||    
T  20706612 gtggttagattcacacacattacgtgtggagaagtggaaaatctaaggttcaaaccttgacctctgcacaaattatcgttggtagctaccaactgagcta 20706513  T
Q  449 ca 450  Q
    ||    
T  20706512 ca 20706511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 426
Target Start/End: Complemental strand, 1963920 - 1963871
Alignment:
Q  377 gagaagtggggaatccggagttcgaaccccgacccctgcacaaattatcc 426  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  1963920 gagaagtggggaatccgaagttggaaccccaacccctgcacaaattatcc 1963871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 6558924 - 6558843
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| |||||||||| |||||  |||||||  |||  ||||||||||| |||  |||||||||||||||||||||||||||    
T  6558924 gtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtagggtgtccggagttcgaaccccgacccctgca 6558843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 39969019 - 39968966
Alignment:
Q  351 ggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaacc 404  Q
    ||||| |||| ||||||||||||||||||||||||| ||||| |||||| ||||    
T  39969019 ggctaaattcgcacacattatgtgtggagaagtgggaaatccagagttcaaacc 39968966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 452
Target Start/End: Original strand, 28580436 - 28580516
Alignment:
Q  372 gtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    |||||||||||||||||||| || |||||||||| | | |||||| | ||| ||  ||||||||| ||||||| |||||||    
T  28580436 gtgtggagaagtggggaatctggggttcgaaccctggctcctgcaaacattgtctctggtagctatcaactgagctacact 28580516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 452
Target Start/End: Original strand, 36730206 - 36730285
Alignment:
Q  372 gtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    ||||||||||||||||||||||| |||| ||  | | |||||||| | ||| ||| ||||||||||||||||| |||||||    
T  36730206 gtgtggagaagtggggaatccggggttc-aaatctggcccctgcaaatattgtccctggtagctaccaactgagctacact 36730285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 3741039 - 3740996
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||||||||||  ||||| |||||||||||||||||||||    
T  3741039 tgtggagaagtggggtgtccggggttcgaaccccgacccctgca 3740996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 13621892 - 13621974
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacaca--ttatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  | ||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  13621892 gtcaagtagcctagtggctagagcctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 13621974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 27241726 - 27241683
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||    
T  27241726 tgtggagaagtggggtatccggagtttaaaccccgacccctgca 27241683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 444
Target Start/End: Original strand, 41083524 - 41083593
Alignment:
Q  374 gtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    ||||||||||||||  |||||| |||||||||||||||||||| ||||||| ||  ||  |||||||||||    
T  41083524 gtggagaagtggggtgtccgga-ttcgaaccccgacccctgcataaattatgcaatgtctctaccaactga 41083593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 15241519 - 15241438
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||| ||||||||||||  |||||||  |||  |||||||||||||||  ||||  |||||||||||||||||||||    
T  15241519 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgca 15241438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 336 - 448
Target Start/End: Complemental strand, 35977 - 35865
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||| |||||||||||||||||| ||||||||||| ||||| |||| |||| || ||||| ||||||||||||||||||||||||  || |||||    
T  35977 gtcaagtagtctagtggctagattcacatacattatgtgtagagaaatgggaaatctggggttcggaccccgacccctgcacaaattatctctgatagct 35878  T
Q  436 accaactgaacta 448  Q
    |||||||||||||    
T  35877 accaactgaacta 35865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 8757262 - 8757378
Alignment:
Q  336 gtcaaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagct 435  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||| | | ||  ||||||||    
T  8757262 gtcaagtagcctagtggttagattcacacacattatgtgtggagacgtggggaatccagggttcgaaccccggcccctgcacataatgtctctggtagct 8757361  T
Q  436 accaactgaactacact 452  Q
    ||||||| | |||||||    
T  8757362 accaactaagctacact 8757378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 35997087 - 35996982
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaac 446  Q
    ||||||||||| |||||||||||||||||| |||||||| |||| |||| || ||||||| ||| ||||||||||||||  || |||||||||||||| |    
T  35997087 tagtggctagagtcacacacattatgtgtgaagaagtggagaattcggaatttgaaccccaaccactgcacaaattatctctgatagctaccaactgagc 35996988  T
Q  447 tacact 452  Q
    ||||||    
T  35996987 tacact 35996982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 346 - 452
Target Start/End: Complemental strand, 2098855 - 2098750
Alignment:
Q  346 ctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaa 445  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| |  ||| ||||| |||| | ||||||| |||||||||||||||     
T  2098855 ctagtggctagattcacacacattatatgtggagaagtggagaatccggggttcggattccg-cccctacacataatatccattgtagctaccaactgag 2098757  T
Q  446 ctacact 452  Q
    |||||||    
T  2098756 ctacact 2098750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 2661632 - 2661698
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccct 413  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||  |||||||||||||    
T  2661632 tagtggctagattcacacatattatgtgtggagaagtgaggaatccggtgtttaaaccccgacccct 2661698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 31124590 - 31124674
Alignment:
Q  340 aatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    ||||||||||||||||||  ||||||| ||||  ||||||||||||||| ||||||||||||||||||| |||||||| |||||||    
T  31124590 aatagcctagtggctagagctcacaca-attaaatgtggagaagtggggtatccggagttcgaaccccggcccctgcataaattat 31124674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 452
Target Start/End: Complemental strand, 7550127 - 7550016
Alignment:
Q  339 aaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctacc 438  Q
    ||||| ||||| |||||||| ||||||| | | ||||||||||||||||||||||| |||||||||||| |||||||| | | | ||  ||||||||| |    
T  7550127 aaataacctagaggctagat-cacacac-taaagtgtggagaagtggggaatccggggttcgaaccccggcccctgcaaataatgtctctggtagctatc 7550030  T
Q  439 aactgaactacact 452  Q
    |||||| |||||||    
T  7550029 aactgagctacact 7550016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 42490363 - 42490438
Alignment:
Q  342 tagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||||| |||| ||||||||  |||  |||||||||||||||  ||||| |||||||||||||||||||||    
T  42490363 tagcctagtggttagagttcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgca 42490438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 21265779 - 21265698
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  21265779 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 21265698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 33207328 - 33207247
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| |||||||||||||| |  |||||||  |||| |||||||||||||||  ||||| |||||||||||| ||||||||    
T  33207328 gtcaagtagcctagtggctatagctcacacaacttatttgtggagaagtggggtgtccggggttcgaaccccggcccctgca 33207247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 416
Target Start/End: Complemental strand, 42908846 - 42908810
Alignment:
Q  380 aagtggggaatccggagttcgaaccccgacccctgca 416  Q
    |||||||| ||||||||||||||||||||||||||||    
T  42908846 aagtggggtatccggagttcgaaccccgacccctgca 42908810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 403
Target Start/End: Original strand, 5444306 - 5444349
Alignment:
Q  360 cacacacattatgtgtggagaagtggggaatccggagttcgaac 403  Q
    |||||||||||||||||||||||||  |||| ||||||||||||    
T  5444306 cacacacattatgtgtggagaagtgaagaattcggagttcgaac 5444349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 418
Target Start/End: Complemental strand, 13350864 - 13350793
Alignment:
Q  347 tagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcaca 418  Q
    ||||| ||| ||||||| | |||||||||||||||||||  ||| ||||||||||||||  |||| ||||||    
T  13350864 tagtgactatattcacaaatattatgtgtggagaagtggaaaattcggagttcgaaccctaacccatgcaca 13350793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 444
Target Start/End: Original strand, 36666561 - 36666632
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactga 444  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| ||||||| ||  ||  |||||||||||    
T  36666561 tgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactga 36666632  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 7438696 - 7438654
Alignment:
Q  380 aagtggggaatccggagttcgaaccccgacccctgcacaaatt 422  Q
    ||||||||  |||||||||||||||||||||||| ||||||||    
T  7438696 aagtggggtgtccggagttcgaaccccgacccctacacaaatt 7438654  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 23991219 - 23991300
Alignment:
Q  343 agcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    |||||||||||||||  ||||||| ||||  |||||||||||||||  ||| | |||||||||||| |||||||| |||||||    
T  23991219 agcctagtggctagagctcacaca-attaaatgtggagaagtggggtgtccagggttcgaaccccggcccctgcataaattat 23991300  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 3742302 - 3742343
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctg 414  Q
    |||||||||||||||  ||||| |||||||||||||||||||    
T  3742302 tgtggagaagtggggtgtccggggttcgaaccccgacccctg 3742343  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 12650331 - 12650412
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  |||||||||||||| | |||| |||||    
T  12650331 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggagttcgaactctgacctctgca 12650412  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 28564292 - 28564373
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||  ||||||||||| |||||||||    
T  28564292 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccaacccctgca 28564373  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 29936701 - 29936742
Alignment:
Q  380 aagtggggaatccggagttcgaaccccgacccctgcacaaat 421  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  29936701 aagtggggtgtccggagttcgaactccgacccctgcacaaat 29936742  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 32594374 - 32594293
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  ||||||||||||| |  ||||| |||||||||||||| ||||||    
T  32594374 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgca 32594293  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 39346926 - 39347007
Alignment:
Q  336 gtcaaatagcctagtggctag-attcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||||||||||||||||||| | |||||||  |||  ||||||||||||| |  ||||| |||||||||||| | ||||||    
T  39346926 gtcaaatagcctagtggctagaactcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgca 39347007  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 442
Target Start/End: Original strand, 43021607 - 43021676
Alignment:
Q  373 tgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaact 442  Q
    |||||||||||||||  ||||  ||||||||||||||||||||| ||| ||| ||| ||  |||||||||    
T  43021607 tgtggagaagtggggtgtccgaggttcgaaccccgacccctgcataaaatatgcattgtccctaccaact 43021676  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 44732756 - 44732675
Alignment:
Q  336 gtcaaatagcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||| |||||||||||| ||||||||  |||  |||||||||||||||  ||||| |||||||||||| ||| ||||    
T  44732756 gtcaagtagtctagtggctagagttcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccttgca 44732675  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 344 - 424
Target Start/End: Original strand, 45416134 - 45416214
Alignment:
Q  344 gcctagtggctaga-ttcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattat 424  Q
    ||||||||| |||| |||||||| ||||  |||||||||||||||  |||||  ||||||||||| |||||||| |||||||    
T  45416134 gcctagtggttagagttcacaca-attaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattat 45416214  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 50119094 - 50119014
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||| ||||||||||  ||||||| ||||  |||||||||||||||  ||||| |||||||| ||||||||||||    
T  50119094 gtcaagtagcccagtggctagagctcacaca-attaaatgtggagaagtggggtgtccggggttcgaactccgacccctgca 50119014  T

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Target: scaffold0178 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 394
Target Start/End: Original strand, 9703 - 9749
Alignment:
Q  348 agtggctagattcacacacattatgtgtggagaagtggggaatccgg 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9703 agtggctagattcacacacattatgtgtggagaagtggggaatccgg 9749  T

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Target: scaffold0035 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 452
Target Start/End: Complemental strand, 23806 - 23709
Alignment:
Q  353 ctagattcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgcacaaattatccatggtagctaccaactgaactacact 452  Q
    |||||||||||| ||||||||||| ||||||||||||||| | ||||||| || || |||||| ||||||||  |||||| ||||||||||| |||||||    
T  23806 ctagattcacacgcattatgtgtgaagaagtggggaatccag-gttcgaa-cctgatccctgcgcaaattatttatggtaactaccaactgagctacact 23709  T

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Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 339 - 403
Target Start/End: Original strand, 58636 - 58700
Alignment:
Q  339 aaatagcctagtggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaac 403  Q
    |||||| |||||||||||| ||||||| || ||||||||||||||||| ||||||| ||||||||    
T  58636 aaatagtctagtggctagaatcacacatataatgtgtggagaagtgggaaatccggggttcgaac 58700  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 161038 - 160984
Alignment:
Q  28 tgttgaagttgtacgtgaaaacccttcgaactttttgtggaagaaaccctagaag 82  Q
    |||||| |||| | ||||||||||||||||  |||||||||||||||||||||||    
T  161038 tgttgaggttgaaagtgaaaacccttcgaatcttttgtggaagaaaccctagaag 160984  T

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Target: scaffold0088 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 10773 - 10854
Alignment:
Q  336 gtcaaatagcctagtggctagat-tcacacacattatgtgtggagaagtggggaatccggagttcgaaccccgacccctgca 416  Q
    ||||| ||||||||||||||||  |||||||  |||  |||||||||||||||  ||||| |||||||||||| ||||||||    
T  10773 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgca 10854  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 615
Target Start/End: Original strand, 41470 - 41555
Alignment:
Q  530 gaagaaaacaaaaatatttcctataatttaaaattataataactaaatatcatttactaaaagtggcagtgaaataaaatttattt 615  Q
    |||||||| | || ||||| |||| ||| | ||||||||||| ||||| | |||||| ||||| | || |||||||||||||||||    
T  41470 gaagaaaaaataattattttctatcattgataattataataattaaatcttatttaccaaaagcgtcaatgaaataaaatttattt 41555  T

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