View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7950_low_44 (Length: 295)
Name: NF7950_low_44
Description: NF7950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7950_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 39947070 - 39947346
Alignment:
| Q |
1 |
tgcaaagaacccacttcttactcttggctatattttctacattacatctttcaattaagggaagaaaattaatggacacatctttccttttgtgtgaaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39947070 |
tgcaaagaacccacttcttactcttggctatattttctacattacatctttcaattaagggaagaaaattaatggacacatctttccttttgtgtgaaga |
39947169 |
T |
|
| Q |
101 |
agaccacactttcctccttatgcacaaaaatgatcacaatgaaaatattaacaattccaagtatgaagaaaaggaacatattgagtatttgtttcaactt |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39947170 |
agaccacactttcctccttatgcacaacaatgatcacaatgaaaatattaacaattccaagtatgaagaaaaggaacatattgagtatttgtttcaactt |
39947269 |
T |
|
| Q |
201 |
gaaaaaacagaatctatgtccttcaattattgctccaactcaaccataggccttgtccatttcaacaacatacgtgt |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39947270 |
gaaaaaacagaatctatgtccttcaattattgctccaactcaaccataggccttgtccatttcaacaacatacgtgt |
39947346 |
T |
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