View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7950_low_47 (Length: 282)
Name: NF7950_low_47
Description: NF7950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7950_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 2987757 - 2987493
Alignment:
| Q |
1 |
gctcgccgaactgatggctatagtggagatgatttgacaaacgtttgtcgtgatgcttccttgaatggaatgaggcgaaagatagcagggaagactcgcg |
100 |
Q |
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| T |
2987757 |
gctcgccggactgatggctatagtggagatgatttgacaaacgtctgtcgcgatgcttccttgaatggaatgaggcggaagatagcaggaaagactcgtg |
2987658 |
T |
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| Q |
101 |
atgaaattaagagtatgtctaaggatgagatttcaaaggatcctgttgccatgtgtgattttgaagaagcattggtaaaggtccaacgaagtgtttctcc |
200 |
Q |
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| T |
2987657 |
atgaaattaagagtatgtctaaggatgagatttcgaaggatcctgttgccatgtgtgattttgaagaagcattggtaaaagtccaacgaagtgtttctcc |
2987558 |
T |
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| Q |
201 |
ggctgatattgaacgccacgagaagtggtttcatgaatttggatcagcataaagacacaccaatg |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2987557 |
ggctgatattgaacgccacgagaagtggtttcatgaatttggatcagcataaagacacaccaatg |
2987493 |
T |
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