View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7952_low_6 (Length: 244)

Name: NF7952_low_6
Description: NF7952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7952_low_6
NF7952_low_6
[»] chr7 (79 HSPs)
chr7 (135-237)||(12318130-12318232)
chr7 (138-237)||(15580694-15580793)
chr7 (134-237)||(13635469-13635572)
chr7 (134-230)||(11312658-11312754)
chr7 (136-237)||(16583259-16583360)
chr7 (5-78)||(11312810-11312883)
chr7 (134-235)||(15605272-15605374)
chr7 (5-78)||(12318289-12318362)
chr7 (5-78)||(15605143-15605216)
chr7 (137-219)||(70768-70850)
chr7 (137-219)||(74877-74959)
chr7 (137-219)||(26292416-26292498)
chr7 (137-219)||(39722287-39722369)
chr7 (8-78)||(16583417-16583487)
chr7 (137-219)||(12714885-12714967)
chr7 (137-219)||(12718689-12718771)
chr7 (8-78)||(13635343-13635413)
chr7 (137-219)||(16114262-16114344)
chr7 (137-219)||(16117415-16117497)
chr7 (137-219)||(16907204-16907286)
chr7 (137-219)||(18283387-18283469)
chr7 (134-237)||(9593348-9593450)
chr7 (5-72)||(9593513-9593580)
chr7 (5-72)||(9644476-9644543)
chr7 (137-219)||(33128-33210)
chr7 (137-219)||(12704662-12704744)
chr7 (137-219)||(18279424-18279506)
chr7 (134-237)||(13918781-13918881)
chr7 (141-237)||(19066-19161)
chr7 (142-227)||(11987225-11987308)
chr7 (137-219)||(12723600-12723682)
chr7 (5-78)||(18929-19002)
chr7 (134-237)||(1859087-1859187)
chr7 (7-78)||(15580853-15580924)
chr7 (167-233)||(2832482-2832548)
chr7 (134-225)||(7519359-7519447)
chr7 (169-237)||(25927536-25927604)
chr7 (134-235)||(2530391-2530491)
chr7 (165-220)||(3271846-3271901)
chr7 (166-221)||(9751794-9751849)
chr7 (134-224)||(16457358-16457446)
chr7 (5-60)||(16724502-16724557)
chr7 (5-60)||(17701516-17701571)
chr7 (5-52)||(48593327-48593374)
chr7 (5-78)||(11987373-11987447)
chr7 (5-70)||(13461931-13461996)
chr7 (5-78)||(16438905-16438978)
chr7 (165-221)||(12321780-12321836)
chr7 (169-237)||(16275495-16275563)
chr7 (166-221)||(14429905-14429960)
chr7 (170-237)||(35151609-35151676)
chr7 (7-70)||(42205284-42205347)
chr7 (167-233)||(19649530-19649596)
chr7 (5-70)||(13149324-13149389)
chr7 (5-62)||(15728502-15728559)
chr7 (134-237)||(13149158-13149259)
chr7 (177-221)||(39267950-39267994)
chr7 (7-78)||(33269-33340)
chr7 (7-78)||(70638-70709)
chr7 (7-78)||(74747-74818)
chr7 (167-234)||(2760140-2760207)
chr7 (170-237)||(8917430-8917497)
chr7 (170-237)||(14216918-14216985)
chr7 (170-237)||(15728328-15728395)
chr7 (170-237)||(16724665-16724732)
chr7 (170-237)||(17701679-17701746)
chr7 (5-62)||(8917604-8917661)
chr7 (13-62)||(14430071-14430120)
chr7 (184-233)||(24054474-24054523)
chr7 (13-69)||(6801383-6801439)
chr7 (148-235)||(18425443-18425528)
chr7 (13-61)||(18557151-18557199)
chr7 (31-78)||(2530040-2530087)
chr7 (170-237)||(13461764-13461831)
chr7 (170-237)||(18556976-18557043)
chr7 (173-220)||(42204017-42204064)
chr7 (167-221)||(9446199-9446253)
chr7 (189-230)||(14152048-14152089)
chr7 (5-62)||(14217092-14217149)
[»] chr1 (42 HSPs)
chr1 (134-233)||(24783100-24783199)
chr1 (134-237)||(36819308-36819412)
chr1 (137-219)||(1010744-1010826)
chr1 (134-235)||(16080444-16080545)
chr1 (5-78)||(16080315-16080388)
chr1 (137-219)||(20228812-20228894)
chr1 (5-78)||(36819179-36819252)
chr1 (137-219)||(16375461-16375543)
chr1 (137-219)||(21407376-21407458)
chr1 (6-78)||(33797695-33797767)
chr1 (137-219)||(52639562-52639644)
chr1 (5-78)||(19212029-19212102)
chr1 (134-237)||(33797286-33797386)
chr1 (134-237)||(19211870-19211972)
chr1 (1-70)||(20138253-20138322)
chr1 (5-78)||(23819170-23819243)
chr1 (165-221)||(18182159-18182215)
chr1 (7-70)||(18393836-18393899)
chr1 (167-220)||(17678626-17678679)
chr1 (134-237)||(20138086-20138188)
chr1 (173-221)||(3472969-3473017)
chr1 (7-78)||(1010885-1010956)
chr1 (7-70)||(45310239-45310302)
chr1 (5-70)||(18882537-18882602)
chr1 (183-230)||(21313138-21313185)
chr1 (7-78)||(24782973-24783044)
chr1 (167-221)||(3705105-3705159)
chr1 (134-219)||(23819300-23819383)
chr1 (160-221)||(22449299-22449360)
chr1 (134-237)||(18882371-18882472)
chr1 (173-220)||(18394012-18394059)
chr1 (172-235)||(20229267-20229330)
chr1 (165-220)||(21788081-21788136)
chr1 (168-219)||(33050067-33050118)
chr1 (173-220)||(45310415-45310462)
chr1 (13-60)||(45489621-45489668)
chr1 (166-220)||(21714569-21714623)
chr1 (184-233)||(20091534-20091583)
chr1 (13-70)||(21022822-21022879)
chr1 (8-69)||(46975638-46975699)
chr1 (141-224)||(12646888-12646969)
chr1 (13-61)||(12647049-12647097)
[»] chr3 (88 HSPs)
chr3 (134-237)||(15482666-15482769)
chr3 (134-230)||(2897823-2897919)
chr3 (134-230)||(20461500-20461596)
chr3 (5-78)||(7793220-7793293)
chr3 (134-230)||(7793349-7793446)
chr3 (5-78)||(20461371-20461444)
chr3 (137-219)||(30065970-30066052)
chr3 (5-78)||(327035-327108)
chr3 (137-219)||(11070092-11070174)
chr3 (137-219)||(11165532-11165614)
chr3 (141-219)||(15617398-15617476)
chr3 (134-230)||(327164-327261)
chr3 (13-78)||(15482825-15482890)
chr3 (134-235)||(31097555-31097656)
chr3 (137-219)||(55022891-55022973)
chr3 (137-219)||(7109722-7109804)
chr3 (137-219)||(7113657-7113739)
chr3 (137-219)||(14499349-14499431)
chr3 (137-219)||(22336743-22336825)
chr3 (137-219)||(27409647-27409729)
chr3 (137-219)||(28949748-28949830)
chr3 (5-78)||(31097425-31097499)
chr3 (134-219)||(11854757-11854842)
chr3 (137-219)||(22321688-22321770)
chr3 (134-237)||(8489473-8489573)
chr3 (134-237)||(15464869-15464969)
chr3 (166-233)||(14668567-14668634)
chr3 (7-77)||(15849958-15850028)
chr3 (165-234)||(19725949-19726018)
chr3 (134-237)||(5223068-5223168)
chr3 (7-78)||(2897696-2897767)
chr3 (166-233)||(14665411-14665478)
chr3 (145-235)||(15850095-15850183)
chr3 (167-233)||(12172806-12172872)
chr3 (9-70)||(3402830-3402891)
chr3 (7-70)||(3389808-3389871)
chr3 (7-78)||(11854898-11854969)
chr3 (135-228)||(11854430-11854520)
chr3 (167-221)||(18383956-18384010)
chr3 (7-73)||(26190881-26190947)
chr3 (134-237)||(12339470-12339570)
chr3 (173-220)||(3403003-3403050)
chr3 (7-78)||(11300384-11300455)
chr3 (174-221)||(11862815-11862862)
chr3 (165-220)||(12496280-12496335)
chr3 (7-78)||(30066111-30066182)
chr3 (167-221)||(1982851-1982905)
chr3 (169-235)||(4589228-4589294)
chr3 (167-233)||(15878092-15878158)
chr3 (169-235)||(19775353-19775419)
chr3 (167-233)||(23053128-23053194)
chr3 (5-78)||(16797925-16797998)
chr3 (5-78)||(16808752-16808825)
chr3 (5-70)||(38814554-38814619)
chr3 (173-221)||(322614-322662)
chr3 (134-237)||(11300767-11300868)
chr3 (169-237)||(16696789-16696857)
chr3 (134-237)||(16798055-16798156)
chr3 (5-61)||(17242151-17242207)
chr3 (173-220)||(3389983-3390030)
chr3 (7-78)||(11070233-11070304)
chr3 (7-78)||(55023032-55023103)
chr3 (167-233)||(12037993-12038058)
chr3 (167-233)||(23077518-23077584)
chr3 (13-70)||(322772-322829)
chr3 (5-70)||(3833844-3833909)
chr3 (7-48)||(11165402-11165443)
chr3 (167-220)||(11298568-11298621)
chr3 (167-220)||(12511084-12511137)
chr3 (167-220)||(15051531-15051584)
chr3 (167-220)||(15060307-15060360)
chr3 (167-220)||(16909765-16909818)
chr3 (13-70)||(18383795-18383852)
chr3 (167-220)||(46822292-46822345)
chr3 (167-219)||(11557425-11557477)
chr3 (9-77)||(14499491-14499559)
chr3 (148-235)||(16750604-16750689)
chr3 (141-224)||(17241990-17242071)
chr3 (165-233)||(23408438-23408506)
chr3 (13-60)||(11595017-11595064)
chr3 (173-220)||(11595186-11595233)
chr3 (167-221)||(11851603-11851657)
chr3 (13-62)||(12496446-12496495)
chr3 (167-220)||(16369423-16369476)
chr3 (173-237)||(3833678-3833742)
chr3 (13-49)||(11298407-11298443)
chr3 (184-220)||(14878574-14878610)
chr3 (141-216)||(15941912-15941985)
[»] scaffold0036 (2 HSPs)
scaffold0036 (134-230)||(66415-66511)
scaffold0036 (5-78)||(66286-66359)
[»] scaffold0031 (3 HSPs)
scaffold0031 (134-230)||(53575-53671)
scaffold0031 (5-78)||(53727-53800)
scaffold0031 (166-219)||(65838-65891)
[»] chr6 (69 HSPs)
chr6 (134-230)||(17804207-17804303)
chr6 (134-235)||(22430030-22430131)
chr6 (134-230)||(25767168-25767264)
chr6 (5-78)||(17804359-17804432)
chr6 (5-78)||(25767039-25767112)
chr6 (138-219)||(22862967-22863048)
chr6 (137-219)||(1644726-1644808)
chr6 (137-219)||(8243882-8243964)
chr6 (137-219)||(11566883-11566965)
chr6 (137-219)||(14472292-14472373)
chr6 (137-219)||(19870611-19870693)
chr6 (137-219)||(23395089-23395171)
chr6 (135-219)||(18955764-18955848)
chr6 (6-78)||(27415814-27415886)
chr6 (3-78)||(12706851-12706926)
chr6 (137-219)||(18917269-18917351)
chr6 (137-219)||(23989941-23990023)
chr6 (134-237)||(12706692-12706794)
chr6 (134-237)||(23414649-23414749)
chr6 (134-237)||(27556407-27556507)
chr6 (134-237)||(5616816-5616917)
chr6 (166-230)||(27325650-27325714)
chr6 (8-78)||(16741368-16741438)
chr6 (139-219)||(12618850-12618929)
chr6 (7-78)||(18955636-18955707)
chr6 (7-78)||(22429903-22429974)
chr6 (168-221)||(16523425-16523478)
chr6 (167-220)||(18180517-18180570)
chr6 (165-221)||(18907133-18907189)
chr6 (169-237)||(21702291-21702359)
chr6 (7-78)||(14472432-14472503)
chr6 (166-233)||(19873130-19873197)
chr6 (169-235)||(1644293-1644359)
chr6 (169-235)||(31478265-31478331)
chr6 (5-62)||(1587602-1587659)
chr6 (184-233)||(19862988-19863037)
chr6 (170-237)||(1587766-1587833)
chr6 (165-232)||(15041589-15041656)
chr6 (173-220)||(19790826-19790873)
chr6 (165-220)||(19848034-19848089)
chr6 (9-60)||(22592679-22592730)
chr6 (7-78)||(22863108-22863179)
chr6 (141-237)||(2685326-2685421)
chr6 (167-233)||(15894479-15894545)
chr6 (8-70)||(20803427-20803489)
chr6 (167-221)||(20908022-20908076)
chr6 (167-221)||(27553612-27553666)
chr6 (5-62)||(12496486-12496543)
chr6 (13-62)||(16523281-16523330)
chr6 (168-221)||(22408345-22408398)
chr6 (184-233)||(22432259-22432308)
chr6 (184-233)||(22438809-22438858)
chr6 (180-237)||(27416232-27416289)
chr6 (5-61)||(2685190-2685246)
chr6 (173-237)||(12496312-12496376)
chr6 (141-224)||(19662787-19662868)
chr6 (169-237)||(25135706-25135774)
chr6 (13-60)||(19790657-19790704)
chr6 (170-237)||(20803589-20803656)
chr6 (165-220)||(23992454-23992509)
chr6 (166-233)||(25642227-25642294)
chr6 (5-70)||(9482164-9482229)
chr6 (167-220)||(21766718-21766771)
chr6 (184-233)||(22334955-22335004)
chr6 (173-218)||(23657468-23657513)
chr6 (148-235)||(16624137-16624222)
chr6 (13-61)||(19662948-19662996)
chr6 (7-47)||(20907854-20907894)
chr6 (173-221)||(27567656-27567704)
[»] chr2 (48 HSPs)
chr2 (134-230)||(24735413-24735509)
chr2 (5-78)||(24735565-24735638)
chr2 (137-219)||(10101648-10101730)
chr2 (8-78)||(19688630-19688700)
chr2 (137-219)||(24649378-24649460)
chr2 (137-219)||(12901515-12901597)
chr2 (137-219)||(27379436-27379518)
chr2 (137-219)||(27383482-27383564)
chr2 (137-219)||(27601817-27601899)
chr2 (137-219)||(24628482-24628564)
chr2 (134-237)||(31344881-31344981)
chr2 (167-234)||(37524684-37524751)
chr2 (167-220)||(24716569-24716622)
chr2 (173-221)||(21318683-21318731)
chr2 (173-221)||(21327614-21327662)
chr2 (169-237)||(41666953-41667021)
chr2 (7-78)||(10101518-10101589)
chr2 (167-221)||(22811952-22812006)
chr2 (5-70)||(19928373-19928438)
chr2 (167-220)||(25961575-25961628)
chr2 (5-62)||(27263451-27263508)
chr2 (5-69)||(18855332-18855396)
chr2 (13-69)||(23187246-23187302)
chr2 (13-69)||(23598509-23598565)
chr2 (173-233)||(24673579-24673639)
chr2 (173-221)||(24869902-24869950)
chr2 (170-237)||(23187079-23187146)
chr2 (170-237)||(23598342-23598409)
chr2 (170-237)||(27263276-27263343)
chr2 (7-70)||(40428645-40428708)
chr2 (167-221)||(24174822-24174876)
chr2 (5-62)||(60993-61050)
chr2 (167-220)||(22799167-22799220)
chr2 (141-224)||(22461196-22461277)
chr2 (173-233)||(24680198-24680258)
chr2 (160-220)||(25963749-25963809)
chr2 (166-233)||(22741004-22741071)
chr2 (166-233)||(22758759-22758826)
chr2 (7-58)||(24716403-24716454)
chr2 (165-220)||(25616212-25616267)
chr2 (166-220)||(23038054-23038108)
chr2 (167-221)||(24655379-24655433)
chr2 (167-233)||(40622251-40622317)
chr2 (13-62)||(21918194-21918243)
chr2 (141-216)||(18855468-18855541)
chr2 (134-237)||(19928503-19928604)
chr2 (173-221)||(21916145-21916193)
chr2 (13-61)||(22461068-22461116)
[»] chr4 (57 HSPs)
chr4 (134-237)||(22634422-22634525)
chr4 (137-230)||(36133965-36134058)
chr4 (137-219)||(9556551-9556633)
chr4 (137-219)||(17810293-17810375)
chr4 (137-219)||(4561337-4561419)
chr4 (137-219)||(14757425-14757507)
chr4 (9-78)||(36133837-36133906)
chr4 (134-237)||(1951762-1951864)
chr4 (135-219)||(27534047-27534131)
chr4 (5-72)||(1951632-1951699)
chr4 (141-225)||(18222386-18222468)
chr4 (6-78)||(43256033-43256105)
chr4 (137-219)||(5756941-5757023)
chr4 (134-237)||(43256414-43256514)
chr4 (1-78)||(17152354-17152431)
chr4 (5-78)||(18222249-18222322)
chr4 (139-219)||(33742399-33742478)
chr4 (170-237)||(3412802-3412869)
chr4 (148-237)||(17152501-17152589)
chr4 (170-237)||(18236895-18236962)
chr4 (141-237)||(18228861-18228956)
chr4 (5-62)||(18228724-18228781)
chr4 (168-221)||(20157501-20157554)
chr4 (168-237)||(28569477-28569546)
chr4 (5-69)||(9530604-9530668)
chr4 (169-237)||(14708668-14708736)
chr4 (173-221)||(16488124-16488172)
chr4 (134-237)||(26243666-26243767)
chr4 (7-78)||(14757295-14757366)
chr4 (8-78)||(27534188-27534258)
chr4 (5-70)||(16243271-16243336)
chr4 (5-70)||(19757472-19757537)
chr4 (5-70)||(19782269-19782334)
chr4 (141-237)||(23139275-23139369)
chr4 (5-70)||(26243536-26243601)
chr4 (6-62)||(3412975-3413030)
chr4 (177-221)||(13813069-13813113)
chr4 (134-237)||(16243401-16243502)
chr4 (160-220)||(16348697-16348757)
chr4 (160-220)||(16356985-16357045)
chr4 (5-61)||(23139449-23139505)
chr4 (170-237)||(2014782-2014849)
chr4 (7-78)||(17810434-17810505)
chr4 (167-233)||(12570024-12570090)
chr4 (169-235)||(15224800-15224866)
chr4 (169-237)||(42997484-42997552)
chr4 (173-220)||(25555503-25555550)
chr4 (8-70)||(2014948-2015010)
chr4 (167-221)||(15353348-15353402)
chr4 (13-62)||(18602624-18602674)
chr4 (13-62)||(18609218-18609268)
chr4 (13-62)||(16348543-16348592)
chr4 (13-62)||(16356831-16356880)
chr4 (13-70)||(16487956-16488013)
chr4 (141-237)||(45938152-45938246)
chr4 (173-237)||(19757639-19757703)
chr4 (173-237)||(19782103-19782167)
[»] scaffold0044 (5 HSPs)
scaffold0044 (134-237)||(12907-13010)
scaffold0044 (134-237)||(19191-19294)
scaffold0044 (8-78)||(13066-13136)
scaffold0044 (8-78)||(19350-19420)
scaffold0044 (170-237)||(62264-62331)
[»] chr5 (69 HSPs)
chr5 (134-237)||(23535588-23535690)
chr5 (134-230)||(17410450-17410546)
chr5 (137-219)||(15236783-15236865)
chr5 (137-219)||(19472723-19472805)
chr5 (137-219)||(20295868-20295950)
chr5 (141-237)||(42805423-42805518)
chr5 (5-78)||(23535460-23535533)
chr5 (6-78)||(18356489-18356561)
chr5 (134-237)||(20911172-20911272)
chr5 (5-70)||(18774374-18774439)
chr5 (14-78)||(20910680-20910744)
chr5 (134-237)||(18774206-18774308)
chr5 (6-70)||(17718311-17718375)
chr5 (134-237)||(18355961-18356061)
chr5 (135-237)||(18784049-18784150)
chr5 (9-61)||(20232729-20232781)
chr5 (167-221)||(21366705-21366759)
chr5 (167-220)||(1859017-1859070)
chr5 (5-70)||(18784217-18784282)
chr5 (167-220)||(23451371-23451424)
chr5 (154-219)||(40723607-40723672)
chr5 (5-78)||(42805582-42805655)
chr5 (169-237)||(21885223-21885291)
chr5 (169-233)||(24767588-24767652)
chr5 (5-69)||(26742617-26742681)
chr5 (141-237)||(20232554-20232649)
chr5 (149-237)||(21340782-21340869)
chr5 (141-237)||(26742754-26742849)
chr5 (167-220)||(23458615-23458668)
chr5 (167-220)||(23462876-23462929)
chr5 (5-70)||(33409398-33409463)
chr5 (5-41)||(17410646-17410682)
chr5 (173-221)||(26680604-26680652)
chr5 (173-221)||(26952211-26952259)
chr5 (170-237)||(4036223-4036290)
chr5 (170-237)||(25229441-25229508)
chr5 (170-237)||(25293597-25293664)
chr5 (169-235)||(10752949-10753015)
chr5 (141-237)||(26666138-26666233)
chr5 (141-237)||(26937735-26937830)
chr5 (167-220)||(123346-123399)
chr5 (13-62)||(21366544-21366593)
chr5 (167-220)||(23201383-23201436)
chr5 (169-237)||(26172468-26172536)
chr5 (5-61)||(26666002-26666058)
chr5 (5-61)||(26937599-26937655)
chr5 (173-221)||(31342169-31342217)
chr5 (13-60)||(12028443-12028490)
chr5 (173-220)||(12028612-12028659)
chr5 (7-78)||(15236653-15236724)
chr5 (165-220)||(17517240-17517295)
chr5 (173-220)||(17919198-17919245)
chr5 (173-220)||(20805575-20805622)
chr5 (7-58)||(23451539-23451590)
chr5 (7-58)||(23458783-23458834)
chr5 (7-58)||(23463044-23463095)
chr5 (186-233)||(23501415-23501462)
chr5 (5-60)||(25229277-25229332)
chr5 (5-60)||(25293433-25293488)
chr5 (8-70)||(16674322-16674384)
chr5 (167-221)||(24221899-24221953)
chr5 (141-237)||(24533055-24533150)
chr5 (166-220)||(26704098-26704152)
chr5 (166-220)||(26973831-26973885)
chr5 (5-62)||(4036398-4036455)
chr5 (167-220)||(20766997-20767050)
chr5 (5-78)||(24532919-24532992)
chr5 (5-61)||(21340638-21340694)
chr5 (173-237)||(33409232-33409296)
[»] scaffold0029 (6 HSPs)
scaffold0029 (134-219)||(65528-65613)
scaffold0029 (137-219)||(61615-61697)
scaffold0029 (169-235)||(80300-80366)
scaffold0029 (7-78)||(80874-80945)
scaffold0029 (167-233)||(12773-12839)
scaffold0029 (148-219)||(80736-80805)
[»] scaffold0228 (2 HSPs)
scaffold0228 (134-237)||(18632-18735)
scaffold0228 (7-78)||(18505-18576)
[»] scaffold0525 (2 HSPs)
scaffold0525 (137-219)||(3878-3960)
scaffold0525 (7-78)||(3748-3819)
[»] scaffold0013 (2 HSPs)
scaffold0013 (134-237)||(2673-2775)
scaffold0013 (8-78)||(2547-2617)
[»] scaffold0349 (2 HSPs)
scaffold0349 (137-219)||(12443-12525)
scaffold0349 (7-78)||(12584-12655)
[»] chr8 (46 HSPs)
chr8 (137-219)||(43251834-43251916)
chr8 (137-219)||(19278286-19278368)
chr8 (137-219)||(21972588-21972670)
chr8 (137-219)||(21976673-21976755)
chr8 (134-237)||(16231476-16231578)
chr8 (5-78)||(16231346-16231419)
chr8 (134-237)||(21387077-21387177)
chr8 (165-234)||(15603055-15603124)
chr8 (5-78)||(22028719-22028792)
chr8 (5-70)||(23834343-23834408)
chr8 (135-237)||(21383657-21383756)
chr8 (8-78)||(22045046-22045116)
chr8 (165-234)||(15611507-15611576)
chr8 (5-78)||(18619640-18619713)
chr8 (134-225)||(22044900-22044989)
chr8 (148-237)||(14398123-14398210)
chr8 (168-234)||(22010716-22010782)
chr8 (167-221)||(30643332-30643386)
chr8 (5-62)||(30308625-30308682)
chr8 (137-187)||(22111904-22111954)
chr8 (167-220)||(16861365-16861418)
chr8 (168-237)||(17055412-17055481)
chr8 (5-70)||(23846886-23846951)
chr8 (169-237)||(32598682-32598750)
chr8 (169-237)||(32605214-32605282)
chr8 (165-220)||(18678141-18678196)
chr8 (165-220)||(32121759-32121814)
chr8 (160-234)||(16410287-16410361)
chr8 (167-233)||(17353984-17354050)
chr8 (167-233)||(24755724-24755790)
chr8 (167-220)||(19259632-19259685)
chr8 (134-237)||(23834175-23834277)
chr8 (167-220)||(39094965-39095018)
chr8 (173-220)||(20856472-20856518)
chr8 (167-233)||(16184730-16184796)
chr8 (167-221)||(20466079-20466133)
chr8 (5-70)||(15538618-15538683)
chr8 (141-237)||(17828590-17828684)
chr8 (13-78)||(20465917-20465982)
chr8 (167-219)||(377295-377347)
chr8 (134-237)||(15531893-15531994)
chr8 (134-237)||(15538452-15538553)
chr8 (13-49)||(16410133-16410169)
chr8 (160-220)||(17926739-17926799)
chr8 (173-237)||(23847053-23847117)
chr8 (7-51)||(39094814-39094858)
[»] scaffold0009 (2 HSPs)
scaffold0009 (134-237)||(228374-228475)
scaffold0009 (5-78)||(228244-228317)
[»] scaffold0001 (4 HSPs)
scaffold0001 (135-237)||(173295-173395)
scaffold0001 (5-78)||(173452-173525)
scaffold0001 (167-221)||(422572-422626)
scaffold0001 (7-47)||(422404-422444)
[»] scaffold0372 (1 HSPs)
scaffold0372 (137-219)||(5104-5186)
[»] scaffold0004 (2 HSPs)
scaffold0004 (8-78)||(10458-10528)
scaffold0004 (166-233)||(69804-69871)
[»] scaffold0405 (2 HSPs)
scaffold0405 (5-72)||(9536-9603)
scaffold0405 (148-237)||(9681-9768)
[»] scaffold0177 (2 HSPs)
scaffold0177 (12-78)||(13365-13431)
scaffold0177 (134-204)||(13487-13557)
[»] scaffold0028 (1 HSPs)
scaffold0028 (137-219)||(58722-58804)
[»] scaffold0120 (2 HSPs)
scaffold0120 (134-237)||(20018-20119)
scaffold0120 (5-71)||(19888-19954)
[»] scaffold0003 (5 HSPs)
scaffold0003 (6-78)||(71475-71547)
scaffold0003 (167-221)||(414091-414145)
scaffold0003 (180-237)||(71072-71129)
scaffold0003 (5-60)||(139890-139945)
scaffold0003 (141-237)||(139715-139809)
[»] scaffold0109 (3 HSPs)
scaffold0109 (137-219)||(35946-36027)
scaffold0109 (8-70)||(7114-7176)
scaffold0109 (169-237)||(6948-7016)
[»] scaffold0334 (2 HSPs)
scaffold0334 (141-225)||(18368-18450)
scaffold0334 (5-78)||(18231-18304)
[»] scaffold0168 (2 HSPs)
scaffold0168 (5-78)||(3401-3474)
scaffold0168 (134-237)||(3531-3633)
[»] scaffold0012 (2 HSPs)
scaffold0012 (5-78)||(24839-24912)
scaffold0012 (144-237)||(24980-25072)
[»] scaffold0425 (1 HSPs)
scaffold0425 (167-233)||(169-235)
[»] scaffold1461 (1 HSPs)
scaffold1461 (6-78)||(91-163)
[»] scaffold0293 (1 HSPs)
scaffold0293 (148-237)||(20479-20566)
[»] scaffold0476 (2 HSPs)
scaffold0476 (134-221)||(5608-5702)
scaffold0476 (134-221)||(6803-6897)
[»] scaffold0299 (1 HSPs)
scaffold0299 (134-237)||(6684-6784)
[»] scaffold0216 (1 HSPs)
scaffold0216 (165-221)||(17150-17206)
[»] scaffold1552 (2 HSPs)
scaffold1552 (170-237)||(372-439)
scaffold1552 (6-62)||(531-587)
[»] scaffold1052 (1 HSPs)
scaffold1052 (167-230)||(2918-2981)
[»] scaffold0761 (1 HSPs)
scaffold0761 (167-221)||(6349-6403)
[»] scaffold0327 (2 HSPs)
scaffold0327 (167-233)||(299-365)
scaffold0327 (10-70)||(460-520)
[»] scaffold0124 (2 HSPs)
scaffold0124 (167-221)||(42649-42703)
scaffold0124 (13-70)||(42803-42860)
[»] scaffold0051 (1 HSPs)
scaffold0051 (134-235)||(30890-30988)
[»] scaffold0022 (1 HSPs)
scaffold0022 (167-221)||(73807-73861)
[»] scaffold0676 (3 HSPs)
scaffold0676 (160-221)||(4452-4513)
scaffold0676 (7-78)||(4603-4674)
scaffold0676 (148-219)||(471-541)
[»] scaffold0615 (2 HSPs)
scaffold0615 (167-220)||(2125-2178)
scaffold0615 (13-71)||(1962-2020)
[»] scaffold0393 (2 HSPs)
scaffold0393 (168-221)||(1516-1569)
scaffold0393 (13-62)||(1682-1731)
[»] scaffold0010 (2 HSPs)
scaffold0010 (5-70)||(23386-23451)
scaffold0010 (134-225)||(23232-23321)
[»] scaffold1296 (2 HSPs)
scaffold1296 (173-221)||(415-463)
scaffold1296 (13-70)||(574-631)
[»] scaffold0585 (1 HSPs)
scaffold0585 (169-237)||(9338-9406)
[»] scaffold0166 (1 HSPs)
scaffold0166 (169-233)||(10085-10149)
[»] scaffold0043 (1 HSPs)
scaffold0043 (169-237)||(77205-77273)
[»] scaffold1326 (2 HSPs)
scaffold1326 (7-70)||(1362-1425)
scaffold1326 (167-221)||(1530-1584)
[»] scaffold0130 (2 HSPs)
scaffold0130 (170-237)||(6035-6102)
scaffold0130 (5-62)||(5871-5928)
[»] scaffold0104 (2 HSPs)
scaffold0104 (165-220)||(9536-9591)
scaffold0104 (160-220)||(1853-1913)
[»] scaffold0016 (1 HSPs)
scaffold0016 (166-237)||(207880-207951)
[»] scaffold0671 (1 HSPs)
scaffold0671 (167-233)||(6105-6171)
[»] scaffold0546 (2 HSPs)
scaffold0546 (8-70)||(6131-6193)
scaffold0546 (169-237)||(6291-6359)
[»] scaffold0070 (2 HSPs)
scaffold0070 (5-70)||(10073-10138)
scaffold0070 (134-237)||(9907-10008)
[»] scaffold0008 (2 HSPs)
scaffold0008 (167-220)||(30783-30836)
scaffold0008 (169-237)||(1880-1948)
[»] scaffold0371 (1 HSPs)
scaffold0371 (169-237)||(15341-15409)
[»] scaffold0132 (2 HSPs)
scaffold0132 (5-69)||(36476-36540)
scaffold0132 (149-237)||(36310-36396)
[»] scaffold0111 (2 HSPs)
scaffold0111 (169-237)||(8503-8571)
scaffold0111 (169-237)||(15647-15715)
[»] scaffold0107 (1 HSPs)
scaffold0107 (6-78)||(15290-15361)
[»] scaffold0079 (2 HSPs)
scaffold0079 (160-220)||(44104-44164)
scaffold0079 (13-62)||(44269-44318)
[»] scaffold0193 (1 HSPs)
scaffold0193 (5-60)||(9600-9655)
[»] scaffold0184 (1 HSPs)
scaffold0184 (7-70)||(4097-4160)
[»] scaffold0139 (1 HSPs)
scaffold0139 (166-233)||(19990-20057)
[»] scaffold0080 (2 HSPs)
scaffold0080 (166-221)||(18695-18750)
scaffold0080 (13-73)||(18534-18594)
[»] scaffold0550 (1 HSPs)
scaffold0550 (167-221)||(7493-7547)
[»] scaffold0346 (1 HSPs)
scaffold0346 (173-219)||(15111-15157)
[»] scaffold0210 (4 HSPs)
scaffold0210 (167-233)||(21844-21910)
scaffold0210 (167-233)||(29736-29802)
scaffold0210 (13-69)||(21684-21740)
scaffold0210 (13-69)||(29576-29632)
[»] scaffold0093 (1 HSPs)
scaffold0093 (163-233)||(4841-4911)
[»] scaffold0081 (3 HSPs)
scaffold0081 (167-233)||(14674-14740)
scaffold0081 (167-233)||(23689-23755)
scaffold0081 (167-233)||(39113-39179)
[»] scaffold0056 (1 HSPs)
scaffold0056 (167-233)||(14127-14193)
[»] scaffold0037 (1 HSPs)
scaffold0037 (169-235)||(80810-80876)
[»] scaffold0023 (1 HSPs)
scaffold0023 (167-233)||(38520-38586)
[»] scaffold0297 (2 HSPs)
scaffold0297 (184-233)||(15737-15786)
scaffold0297 (184-233)||(10580-10629)
[»] scaffold0284 (1 HSPs)
scaffold0284 (5-70)||(18524-18589)
[»] scaffold0171 (1 HSPs)
scaffold0171 (167-220)||(35552-35605)
[»] scaffold0042 (3 HSPs)
scaffold0042 (5-70)||(64023-64088)
scaffold0042 (167-221)||(34960-35014)
scaffold0042 (134-237)||(63858-63958)
[»] scaffold0017 (2 HSPs)
scaffold0017 (167-220)||(19773-19826)
scaffold0017 (167-220)||(15251-15304)
[»] scaffold0367 (1 HSPs)
scaffold0367 (160-220)||(920-980)
[»] scaffold0637 (2 HSPs)
scaffold0637 (173-220)||(8583-8630)
scaffold0637 (13-60)||(8752-8799)
[»] scaffold0015 (1 HSPs)
scaffold0015 (7-70)||(192189-192252)
[»] scaffold0439 (2 HSPs)
scaffold0439 (167-221)||(2477-2531)
scaffold0439 (167-221)||(10337-10391)
[»] scaffold0215 (1 HSPs)
scaffold0215 (167-233)||(26838-26904)
[»] scaffold0102 (1 HSPs)
scaffold0102 (166-216)||(48500-48550)
[»] scaffold0101 (1 HSPs)
scaffold0101 (167-233)||(9004-9070)
[»] scaffold0034 (1 HSPs)
scaffold0034 (168-234)||(16696-16762)
[»] scaffold0574 (1 HSPs)
scaffold0574 (187-220)||(7878-7911)
[»] scaffold0342 (1 HSPs)
scaffold0342 (167-220)||(7311-7364)
[»] scaffold0158 (2 HSPs)
scaffold0158 (168-221)||(2854-2907)
scaffold0158 (168-221)||(6520-6573)
[»] scaffold0096 (1 HSPs)
scaffold0096 (167-220)||(16389-16442)
[»] scaffold0035 (1 HSPs)
scaffold0035 (13-78)||(46605-46670)
[»] scaffold0021 (1 HSPs)
scaffold0021 (16-69)||(174952-175005)
[»] scaffold0020 (1 HSPs)
scaffold0020 (184-220)||(178921-178957)


Alignment Details
Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 12318232 - 12318130
Alignment:
Q  135 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  12318232 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagatgatg 12318133  T
Q  235 atg 237  Q
    |||    
T  12318132 atg 12318130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 15580793 - 15580694
Alignment:
Q  138 aagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  15580793 aagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctatcgttatttaactaagttgcatgagtctgaataagatgatgatg 15580694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 13635469 - 13635572
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  13635469 caagaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagttgat 13635568  T
Q  234 gatg 237  Q
    ||||    
T  13635569 gatg 13635572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 11312754 - 11312658
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  11312754 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 11312658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 16583360 - 16583259
Alignment:
Q  136 agaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | |||||||||||||||||||| ||||||    
T  16583360 agaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactacgttgcatgagtctgaataagttgatga 16583261  T
Q  236 tg 237  Q
    ||    
T  16583260 tg 16583259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11312883 - 11312810
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11312883 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 11312810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 15605272 - 15605374
Alignment:
Q  134 caagaagttgttgaaaatgaatt-gatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatga 232  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  ||  |||||||||||||||| |||||    
T  15605272 caagaagttgttgaaaatgaatttgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaaaatgcatgagtctgaatatgatga 15605371  T
Q  233 tga 235  Q
    |||    
T  15605372 tga 15605374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 12318362 - 12318289
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12318362 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgttaag 12318289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 15605143 - 15605216
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15605143 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgttaag 15605216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 70768 - 70850
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  70768 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 70850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 74877 - 74959
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  74877 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 74959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 26292498 - 26292416
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||    
T  26292498 gaagttgttgaaaatgaattgatattaagctgttgatataatctgattatgctgctattgttatttaactaagttgcatgagt 26292416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 39722369 - 39722287
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  39722369 gaagttgttgaaaatgagttgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 39722287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 16583487 - 16583417
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16583487 gaaccttaggtactaatgagacctatataagatattaactgagaactgtgaagctattatgaaatgctaag 16583417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 12714967 - 12714885
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  12714967 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 12714885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 12718771 - 12718689
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  12718771 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 12718689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 13635343 - 13635413
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13635343 gaaccttaggtactaatgaggcctatttaagatattaacagagaactgtgaagctattatgaaatgctaag 13635413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 16114344 - 16114262
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  16114344 gaagttgttgaaaatgaattgataataagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 16114262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 16117497 - 16117415
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  16117497 gaagttgttgaaaatgaattgataataagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 16117415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 16907204 - 16907286
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  16907204 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 16907286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 18283469 - 18283387
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  18283469 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 18283387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 9593450 - 9593348
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatga 232  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||| |||| |||    
T  9593450 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaattaagttga 9593353  T
Q  233 tgatg 237  Q
    |||||    
T  9593352 tgatg 9593348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 9593580 - 9593513
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaat 72  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  9593580 aaggaactttaggtactaatgagacctaataaagatattaactgagaactgtgaagcttttatgaaat 9593513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 9644543 - 9644476
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaat 72  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  9644543 aaggaactttaggtactaatgagacctaataaagatattaactgagaactgtgaagcttttatgaaat 9644476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 33210 - 33128
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||||||   ||||||||||||    
T  33210 gaagttgttgaaaatgaattgatattaagctgttgatatgttccgattatgctgttattgttatttaactcagttgcatgagt 33128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 12704662 - 12704744
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  12704662 gaagttgttgaaaatgaattggtattaagctgctgatataatctgattatgctgctattgttatttaactaagttacatgagt 12704744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 18279506 - 18279424
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  18279506 gaagttgttgaaaatgaattggtattaagttgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 18279424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 13918781 - 13918881
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  13918781 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 13918877  T
Q  234 gatg 237  Q
    ||||    
T  13918878 gatg 13918881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 19066 - 19161
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatgatgatg 237  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||||| | ||||||||||  |||||||||||||||||| |||| ||||||||    
T  19066 ttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgagtctgaattaagttgatgatg 19161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 11987308 - 11987225
Alignment:
Q  142 tgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataa 227  Q
    |||||||||||| ||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||    
T  11987308 tgttgaaaatgatttgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaataa 11987225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 12723682 - 12723600
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||| ||||| ||||||||||||||| | |||||||||||||| |||||||||||||  ||||| |||||||    
T  12723682 gaagttgttgaaaataaattggtattaagctgttgatataatctgattatgctgatattgttatttaactaagttacatgagt 12723600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18929 - 19002
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  18929 aaggaactttaggtgctaatgagacctattaaagatattgactgagaactgtgaagcttttatgatatgttaag 19002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 1859087 - 1859187
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||||||||||| |||||| |||||||||  || |||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  1859087 caagatgttgttgaaaa-gaattgttattaagct--tgttgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 1859183  T
Q  234 gatg 237  Q
    ||||    
T  1859184 gatg 1859187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 15580924 - 15580853
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||  || ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  15580924 ggaactttaggttatagtgagacctatttaggatgttaactgaaaactgtgaagctattatgaaatgctaag 15580853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 2832482 - 2832548
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||||| |||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||    
T  2832482 tgttgatgggatctgattatgctgctattgttatttaactaagttgcatgagtctatataagatgat 2832548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 7519359 - 7519447
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 225  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||| ||||||||||||    
T  7519359 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttggatgagtctgaat 7519447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 25927536 - 25927604
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||||||    
T  25927536 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgatgatg 25927604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 2530391 - 2530491
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatg-tgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatga 232  Q
    |||||| ||| ||||||||||||| |||||||||  ||||  |||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| |||    
T  2530391 caagaaattgctgaaaatgaattgttattaagct--tgattatgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttga 2530488  T
Q  233 tga 235  Q
    |||    
T  2530489 tga 2530491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 3271901 - 3271846
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  3271901 gctgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 3271846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 9751794 - 9751849
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||    
T  9751794 ctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagtct 9751849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 16457358 - 16457446
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 224  Q
    |||||| ||||||||||||| ||| |||||||||  ||||||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  16457358 caagaaattgttgaaaatgatttgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 16457446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 16724502 - 16724557
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  16724502 aaggaaccttaggtactaatgagacctattaaagatattgactgagaactgtgaag 16724557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 17701516 - 17701571
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  17701516 aaggaaccttaggtactaatgagacctattaaagatattgactgagaactgtgaag 17701571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 48593327 - 48593374
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaa 52  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  48593327 aaggaactttaggtactactgagacctatttaagatattaactgagaa 48593374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11987447 - 11987373
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaa-gatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||| |||||||||| ||||||||||| || |||||| |||||||||||||||||| |||||||||| ||||    
T  11987447 aaggaaccttaggtactagtgagacctattaaaagatattgactgagaactgtgaagcttttatgaaatgttaag 11987373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 13461996 - 13461931
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||| ||||||||||||||| ||||| || |||||||||| ||||||| |||||||    
T  13461996 aaggaactttaggtgctaatgagacctattaaagatgttgactgagaactctgaagcttttatgaa 13461931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16438905 - 16438978
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||| ||| ||||||||||| |||||||  ||||||||||||||||||  ||||||||| ||||    
T  16438905 aaggaactttaggtgctagtgagacctattaaagatatggactgagaactgtgaagcttatatgaaatgttaag 16438978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 12321780 - 12321836
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||    
T  12321780 gctgttgttgtgatctgattatgctgctattgttatttaactacgttgcatgagtct 12321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 16275563 - 16275495
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  16275563 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 16275495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 14429960 - 14429905
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||| |||||||||||||||| |||||||||||||||  |||||||||||||||    
T  14429960 ctgttgttgtgatctgattatgcggctattgttatttaactaagttgcatgagtct 14429905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 35151676 - 35151609
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  35151676 tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 35151609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 42205347 - 42205284
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||| ||||| ||||||||| |||| |||||||||| |||||||||| |||||||    
T  42205347 ggaactttaggtagtaatgtgacctatttgagatgttaactgagacctgtgaagctgttatgaa 42205284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 19649530 - 19649596
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  19649530 tgttgttgtaatctgtctatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 19649596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 13149389 - 13149324
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  13149389 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 13149324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 15728559 - 15728502
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||||||||| ||||||||||||| | | |||||| ||||||||||||||||||    
T  15728559 aaggaactttaggtgctaatgagacctaataatgatattgactgagaactgtgaagct 15728502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 13149259 - 13149158
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||| ||||| ||| |||||| |   ||||||||| |||||||||||| | ||||||||||  |||||||||| || |||||||| ||||    
T  13149259 caagaaattgttgagaatgatttgttattaaacc--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtgtatgaataagctgat 13149162  T
Q  234 gatg 237  Q
    ||||    
T  13149161 gatg 13149158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 39267950 - 39267994
Alignment:
Q  177 atctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||||||||||||||||||||||||  |||||||||||||||    
T  39267950 atctgattatgctgctattgttatttaactaagttgcatgagtct 39267994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 33340 - 33269
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||| ||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  33340 ggaactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 33269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 70638 - 70709
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||| ||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  70638 ggaactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 70709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 74747 - 74818
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||| ||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  74747 ggaactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 74818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 2760207 - 2760140
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    ||||| |||||||||||||||||||| | |||||||||  |||||||||||||||  | |||||||||    
T  2760207 tgttgttgtgatctgattatgctgctttcgttatttaactaagttgcatgagtctatacaagatgatg 2760140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 8917497 - 8917430
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||| ||| ||||||||| ||  ||||||||||||| |||||||| ||||||||    
T  8917497 tgatgtgatttgattatgttgcaattgttattaaactaagttgcatgagtatgaataagttgatgatg 8917430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 14216985 - 14216918
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||||    
T  14216985 tgatgtgatttgattatgctgcaattgttattgaactaagttgcatgaatatgaataagttgatgatg 14216918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 15728395 - 15728328
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||||    
T  15728395 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatgatg 15728328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 16724665 - 16724732
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| | |||||||||| ||||||||| ||  ||||||||||||| |||||||| ||||||||    
T  16724665 tgatgtgatttcattatgctgcaattgttattaaactaagttgcatgagtatgaataagttgatgatg 16724732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 17701679 - 17701746
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| | |||||||||| ||||||||| ||  ||||||||||||| |||||||| ||||||||    
T  17701679 tgatgtgatttcattatgctgcaattgttattaaactaagttgcatgagtatgaataagttgatgatg 17701746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 8917661 - 8917604
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||||| ||| ||||||||||||||| |||||||| || ||||||| |||||||    
T  8917661 aaggaactttgggtgctaatgagacctattaaagatattgaccgagaactctgaagct 8917604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 14430120 - 14430071
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||| ||||| |||||||||||||| |||||||||| ||||||||||    
T  14430120 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagct 14430071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 24054523 - 24054474
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  24054523 tatgctgctattgttaattaaccaagttgcatgagtcagtataagatgat 24054474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 6801439 - 6801383
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    |||||| ||| |||||||||||  ||||||| ||||||||||||||||| |||||||    
T  6801439 ttaggtgctagtgagacctattggagatattgactgagaactgtgaagccattatga 6801383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 18425528 - 18425443
Alignment:
Q  148 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| |||||||||  |||| |||  |||||||||||| ||||||||||||  |||||||| || | |||||||| ||||||    
T  18425528 aaatgaattgttattaagct--tgatatgaattgattatgctgcaattgttatttaactaagttgcaagaatatgaataagttgatga 18425443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 18557199 - 18557151
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||| ||| ||||||||||| ||||||||| ||||||||||||||||    
T  18557199 ttaggtgctagtgagacctattaaagatattatctgagaactgtgaagc 18557151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 2530040 - 2530087
Alignment:
Q  31 tatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||| ||||||| |||||||||||||||| ||||||| ||||    
T  2530040 tatttaagatgttaactgggaactgtgaagctattgtgaaatgttaag 2530087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 13461831 - 13461764
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||| ||| ||  || |||||||||| |||||||| ||||||||    
T  13461831 tgatgtgatttgattatgctgcaattgtaattaaactaatttgcatgagtatgaataagttgatgatg 13461764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 18557043 - 18556976
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| | ||||||||||  ||||||||||| | || ||||| ||||||||    
T  18557043 tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgactatgtataagttgatgatg 18556976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 42204064 - 42204017
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||||||||||||||||| ||||| |||||  ||||||||||||||    
T  42204064 tgtgatctgattatgctgctgttgttgtttaactaagttgcatgagtc 42204017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 9446199 - 9446253
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  9446199 tgttgttgtgatctgattatgttgctgctgttatttaactaagttgcatgagtct 9446253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 14152048 - 14152089
Alignment:
Q  189 tgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||| ||||  ||||||||||||||||||||||||    
T  14152048 tgctattgttaattaactaagttgcatgagtctgaataagat 14152089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 14217149 - 14217092
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||| ||||| ||||||||||||| | | |||||| ||| ||||||||||||||    
T  14217149 aaggaactgtaggtgctaatgagacctaataatgatattgactaagaactgtgaagct 14217092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 24783100 - 24783199
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  24783100 caagaagttgttgaaaatgaattgatattaagctgttcatgtgatctgattatgctgctattgttatttaactaagttgcatgagtctgaataagatgat 24783199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 36819308 - 36819412
Alignment:
Q  134 caagaagttgttgaaaatgaatt-gatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatga 232  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||    
T  36819308 caagaagttgttgaaaatgaatttgatattaagctggtgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagttga 36819407  T
Q  233 tgatg 237  Q
    |||||    
T  36819408 tgatg 36819412  T

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Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 1010826 - 1010744
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  1010826 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 1010744  T

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Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 16080444 - 16080545
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||||| ||||||    
T  16080444 caagaagttgttgaaaatgaattgataataagttattgatgtgatctgattatgctgctatttttaattaactaagttgcatgagtctgaatatgatgat 16080543  T
Q  234 ga 235  Q
    ||    
T  16080544 ga 16080545  T

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Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16080315 - 16080388
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  16080315 aaggaactttaggtactaatgagacctatttaagagattaactgagaactgtgaagcttttatgaaatgctaag 16080388  T

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Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 20228812 - 20228894
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||  |||||||||||||    
T  20228812 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgccattgttattaaactaagttgcatgagt 20228894  T

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Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 36819179 - 36819252
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  36819179 aaggaactttaggtactaatgagacctatttaagatattaaatgagaactgtgaagcttttatgaaatgttaag 36819252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 16375461 - 16375543
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  16375461 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 16375543  T

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Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 21407458 - 21407376
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  21407458 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 21407376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 33797767 - 33797695
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  33797767 aggaaccttaggtactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag 33797695  T

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Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 52639644 - 52639562
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||| |||||||||||||  ||||| |||||||    
T  52639644 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgttattgttatttaactaagttacatgagt 52639562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 19212102 - 19212029
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||| ||||    
T  19212102 aaggaactttaggtactaatgagacctataaaagatattgactgagaactgtgaagcttttatgaaatgttaag 19212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 33797386 - 33797286
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  33797386 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 33797290  T
Q  234 gatg 237  Q
    ||||    
T  33797289 gatg 33797286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 19211972 - 19211870
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatga 232  Q
    |||||| ||||||| ||||||||| |||||||||  ||| ||||| |||||||||||| ||||||||||||  |||||||||||||||||| |||| |||    
T  19211972 caagaaattgttgagaatgaattgttattaagct--tgacgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaattaagttga 19211875  T
Q  233 tgatg 237  Q
    |||||    
T  19211874 tgatg 19211870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20138322 - 20138253
Alignment:
Q  1 agggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| | |||||||    
T  20138322 agggaaggaactttaggtactaatgagacctattaaagataataactgtgaactgtgaagtttttatgaa 20138253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 23819170 - 23819243
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||| |||||| ||||||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  23819170 aaggaaccttaggtgctaatgagacctattaaagatattgactgagaactgtgaagcttttatgagatgttaag 23819243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 18182159 - 18182215
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18182159 gctgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 18182215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 18393836 - 18393899
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  18393836 ggaactttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 18393899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 17678626 - 17678679
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  17678626 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 17678679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 20138188 - 20138086
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatga 232  Q
    |||||| ||||||| ||||| ||| |||||| |   ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||| |||| |||    
T  20138188 caagaaattgttgagaatgatttgttattaaacc--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaattaagttga 20138091  T
Q  233 tgatg 237  Q
    |||||    
T  20138090 tgatg 20138086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 3472969 - 3473017
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  3472969 tgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 3473017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 1010956 - 1010885
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  1010956 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 1010885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 45310239 - 45310302
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||| ||||| | |||||||||||| |||||||||| |||||||||| |||||||    
T  45310239 ggaactttaggtagtaatgtggcctatttaagatgttaactgagatctgtgaagctgttatgaa 45310302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 18882602 - 18882537
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||| ||| |||||||||||  |||||||||||||||| ||||||||  |||||||    
T  18882602 aaggaactttaggtgctagtgagacctattagagatattaactgagaattgtgaagcctttatgaa 18882537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 21313185 - 21313138
Alignment:
Q  183 ttatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  21313185 ttatgctgctattgttaattaactaagttgcatgagtctgaataagat 21313138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 24782973 - 24783044
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||| ||  || ||||||||| ||||||| |||||||| || ||||||||| |||||||||||||||    
T  24782973 ggaactttaagttatagtgagacctacttaagatgttaactgaaaattgtgaagctgttatgaaatgctaag 24783044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 3705105 - 3705159
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  3705105 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 3705159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 23819300 - 23819383
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||| ||| ||||||||||||| |||||||||  |||| |||  |||||||||||| ||||||||| ||  |||||||||||||    
T  23819300 caagaaattgctgaaaatgaattgttattaagct--tgatatgaattgattatgctgcaattgttattaaacgaagttgcatgagt 23819383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 22449299 - 22449360
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||| ||| ||| ||||||||||||||||||||| | ||||||||  |||||||||||||||    
T  22449299 attatgctcttgttgtgatctgattatgctgctactattatttaactaagttgcatgagtct 22449360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 18882472 - 18882371
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||  | ||||||||||  |||||||||   | |||||||| ||||    
T  18882472 caagaaattgttgataatgatttgttattaagct--tgatgtgatttgattatgctgaaaatgttatttaactaagttgcatttttatgaataagctgat 18882375  T
Q  234 gatg 237  Q
    ||||    
T  18882374 gatg 18882371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 18394012 - 18394059
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  18394012 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 18394059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 20229267 - 20229330
Alignment:
Q  172 atgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    ||||||| |||||||||||  ||||||||||||  |||||||| |||| |||||||| ||||||    
T  20229267 atgtgatttgattatgctggaattgttatttaactaagttgcaagagtatgaataagttgatga 20229330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 21788081 - 21788136
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||| |||||||||  ||||||||||| |||||||||  ||||||||||||||    
T  21788081 gctgttgttgtgatctgcctatgctgctatggttatttaactaagttgcatgagtc 21788136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 33050067 - 33050118
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||| ||||||||||||||||||||  ||||||||||  |||||||||||||    
T  33050067 gttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagt 33050118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 45310415 - 45310462
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||||||||||||||||| | |||||||||  ||||||||||||||    
T  45310415 tgtgatctgattatgctgctgtcgttatttaactaagttgcatgagtc 45310462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 45489621 - 45489668
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  45489621 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 45489668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 21714623 - 21714569
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||    
T  21714623 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagctgcatgagtc 21714569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 20091534 - 20091583
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  20091534 tatgctgctattgttatttaacctagttgcatgagtcgatataagatgat 20091583  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 21022879 - 21022822
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||| ||||| ||||||| |||||| |||||||  | ||||||||||||||||||    
T  21022879 ttaggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctattatgaa 21022822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 46975699 - 46975638
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    |||||||||||||||||| |||||||| |||||| | |||| ||||| ||||| | ||||||    
T  46975699 gaactttaggtactaatgtgacctattaaagataatgactgtgaactatgaagtttttatga 46975638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 12646969 - 12646888
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 224  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||| ||||||    
T  12646969 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgaatctgaa 12646888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 12647097 - 12647049
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  12647097 ttaggtgctagtgagacctattggagatattgactgagaactgtgaagc 12647049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 15482769 - 15482666
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  15482769 caagaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagttgat 15482670  T
Q  234 gatg 237  Q
    ||||    
T  15482669 gatg 15482666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 2897823 - 2897919
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  2897823 caagaagttgatgaaaataaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaactaagttgcatgagtctgaataagat 2897919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 20461500 - 20461596
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  20461500 caagaagttgttgaagatgaattgatattaagttgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 20461596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 7793220 - 7793293
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7793220 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 7793293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 7793349 - 7793446
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctg-attatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  7793349 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgaattatgctgctattgttaattaactaagttgcatgagtctgaataagat 7793446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 20461371 - 20461444
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20461371 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 20461444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 30066052 - 30065970
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  30066052 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 30065970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 327035 - 327108
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  327035 aaggaaccttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 11070174 - 11070092
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  11070174 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 11070092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 11165532 - 11165614
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||    
T  11165532 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttacatgagt 11165614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 15617476 - 15617398
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  15617476 ttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 15617398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 327164 - 327261
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctga-ttatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  327164 caagaaattgttgaagatgaattgatattaagctgttgatgtgatcttagttatgctgctattgttaattaactaagttgcatgagtctgaataagat 327261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 15482890 - 15482825
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15482890 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 15482825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 31097555 - 31097656
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||  | |||||||||||||||||||| ||||    
T  31097555 caagaaattgttgaaaatgaattgttattaagctattgatgtgatctgattatgctgcaattgttaattaactatgttgcatgagtctgaataagttgat 31097654  T
Q  234 ga 235  Q
    ||    
T  31097655 ga 31097656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 55022973 - 55022891
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||| |||||||    
T  55022973 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatactgctattgttatttaactaagttacatgagt 55022891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 7109804 - 7109722
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  7109804 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 7109722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 7113739 - 7113657
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  7113739 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 7113657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 14499431 - 14499349
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||| | |||||||||||||  |||||||||||||    
T  14499431 gaagttgttgaaaatgaattgatattaagctgttgataagatctgattatgcggttattgttatttaactaagttgcatgagt 14499349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 22336825 - 22336743
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  22336825 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 22336743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 27409647 - 27409729
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  27409647 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 27409729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 28949830 - 28949748
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  28949830 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 28949748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 31097425 - 31097499
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga-aatgctaag 78  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  31097425 aaggaactttaggtactactgagacctatttaagatattaactgagaactgtgaagcttttatgagaatgctaag 31097499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 11854842 - 11854757
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||  |||||||||||||    
T  11854842 caagaagttattgaaaatgaattgatgttaagttgttgatatgatctgattatgctgctattgttattaaactaagttgcatgagt 11854757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 22321770 - 22321688
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||| ||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  22321770 gaagttgttgaaaatgaattggtattaagctattgatataatctgattatgctgctattgttatttaactaagttacatgagt 22321688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 8489473 - 8489573
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  8489473 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 8489569  T
Q  234 gatg 237  Q
    ||||    
T  8489570 gatg 8489573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 15464969 - 15464869
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  15464969 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 15464873  T
Q  234 gatg 237  Q
    ||||    
T  15464872 gatg 15464869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 14668634 - 14668567
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||    
T  14668634 ctgttgatgtgatctgattatgctgctattgttatttaactaagttgcatgagtctatataagatgat 14668567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 15849958 - 15850028
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 77  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| ||||||||||||||    
T  15849958 ggaactttaggtactaatgagacctatttaagatatttaatgagatcggtgaagcttttatgaaatgctaa 15850028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 19725949 - 19726018
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||||||||||    
T  19725949 gctgttgatgtgatctgattatgctgctattgttatttaactaagttgcatgagtcattataagatgatg 19726018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 5223168 - 5223068
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||| |||||| |||||||| ||||    
T  5223168 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgtatgagtatgaataagttgat 5223072  T
Q  234 gatg 237  Q
    ||||    
T  5223071 gatg 5223068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 2897696 - 2897767
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||| || |||| |||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  2897696 ggaactttaggtaatagtgaggcctatttaagatgttaactgttaactgtgaagctattatgaaatgctaag 2897767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 14665478 - 14665411
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||  ||||||||||    
T  14665478 ctgttgatgtgatctgattatgttgctattgttatttaactaagttgcatgagtctatataagatgat 14665411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 15850095 - 15850183
Alignment:
Q  145 tgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    ||||||||||||| |||||| ||  |||| ||||||||||||||||| ||||||||||||  |||||||||||| ||||||||| ||||||    
T  15850095 tgaaaatgaattgttattaaact--tgatatgatctgattatgctgcaattgttatttaactaagttgcatgagactgaataagttgatga 15850183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 12172872 - 12172806
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||    
T  12172872 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtctatataagatgat 12172806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 3402830 - 3402891
Alignment:
Q  9 aactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  3402830 aactttaggtagtaatgtgacctatttaagatgttaactgagacctgtgaagctattatgaa 3402891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 3389808 - 3389871
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  3389808 ggaactttaggtagtaatgtgacctatttaagatgttaactgagacctgtgaagctgttatgaa 3389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 11854969 - 11854898
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  || |||||||||||  ||||||||||||    
T  11854969 ggaactttaggtactaatgagacctatctaagatgttaactgttaattgtgaagctatattgaaatgctaag 11854898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 11854520 - 11854430
Alignment:
Q  135 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataag 228  Q
    |||| |||||||||| ||||||| |||||||||  ||||||||| ||||||||| || ||||||||||||  ||||||||||||| ||||||||    
T  11854520 aagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgccgcaattgttatttaactaagttgcatgagtatgaataag 11854430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 18383956 - 18384010
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18383956 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 18384010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 26190881 - 26190947
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatg 73  Q
    ||||||||||||| |||||||||||||||||||| |||||||| || |||||| ||||| |||||||    
T  26190881 ggaactttaggtagtaatgagacctatttaagatgttaactgaaaattgtgaacctattttgaaatg 26190947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 12339570 - 12339470
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||| ||  ||||| ||  |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  12339570 caagatgttgttgaaa-tgaattgttattaaact--tgatgagaattgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 12339474  T
Q  234 gatg 237  Q
    ||||    
T  12339473 gatg 12339470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 3403003 - 3403050
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  3403003 tgtgatctgattatgctgctattgttatttaactaagttgcatgagtc 3403050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 11300384 - 11300455
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  || ||| |||||||  ||||||||||||    
T  11300384 ggaactttaggtactaatgagacctatctaagatgttaactgttaattgtaaagctatattgaaatgctaag 11300455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 11862862 - 11862815
Alignment:
Q  174 gtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||    
T  11862862 gtgatctgattatgctgctattgttatttaactaagttgcatgagtct 11862815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 12496335 - 12496280
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||| |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  12496335 gctgttgttgtgatctgattatgctgcttttgttatttaactaagttgcatgagtc 12496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 30066182 - 30066111
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  30066182 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 30066111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 1982851 - 1982905
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||||||||||    
T  1982851 tgttgttgtgatctgattatgctgcttttgttatttaactaagttgcatgagtct 1982905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 4589228 - 4589294
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  4589228 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 4589294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 15878092 - 15878158
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  15878092 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 15878158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 19775419 - 19775353
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  19775419 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 19775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 23053128 - 23053194
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||||||||| ||||||||||||||||||||||  | |||||||||||||  ||||||||||    
T  23053128 tgttgttgtgatctgcttatgctgctattgttatttaactatgttgcatgagtctatataagatgat 23053194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16797925 - 16797998
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||| ||||||||||||  ||||||| |||||||| |||||||| ||||||||| ||| |||||| ||||    
T  16797925 aaggaactataggtactaatggaacctattaaagatattgactgagaattgtgaagcttttacgaaatgttaag 16797998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16808752 - 16808825
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||| ||||||||||||  ||||||| |||||||| |||||||| ||||||||| ||| |||||| ||||    
T  16808752 aaggaactataggtactaatggaacctattaaagatattgactgagaattgtgaagcttttacgaaatgttaag 16808825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 38814619 - 38814554
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  38814619 aaggaactttaggtactaatgcgacctattaaagataatgactgtgaactgtgaagtttttatgaa 38814554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 322662 - 322614
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||||||||||||| |||||||||||||||  |||||||||||||||    
T  322662 tgtgatctgattatgccgctattgttatttaactaagttgcatgagtct 322614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 11300767 - 11300868
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctg-aataagatga 232  Q
    ||||| |||||||||| ||||||| |||||| | ||| ||||||| |||||||||| | ||||||||||||  |||||||||||||||| |||||| |||    
T  11300767 caagatgttgttgaaa-tgaattgttattaaac-gtt-atgtgatttgattatgctacaattgttatttaactaagttgcatgagtctgaaataagttga 11300863  T
Q  233 tgatg 237  Q
    |||||    
T  11300864 tgatg 11300868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 16696857 - 16696789
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| || ||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  16696857 ttgatgtgatttgtttatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 16696789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 16798055 - 16798156
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||||||||| ||| ||||||| |  ||||||||| |||||||| |||  |||||||| ||  | ||||||||||| |||||||| ||||    
T  16798055 caagaaattgttgaaaatgatttgttattaagtt--tgatgtgatttgattatgttgcacttgttattaaactatgttgcatgagtatgaataagttgat 16798152  T
Q  234 gatg 237  Q
    ||||    
T  16798153 gatg 16798156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 17242207 - 17242151
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  17242207 aaggaactttaggtgctagtgagacctattagagatattgactgagaactgtgaagc 17242151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 3389983 - 3390030
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  3389983 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtc 3390030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 11070304 - 11070233
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||   |||||||||||    
T  11070304 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatatcgaaatgctaag 11070233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 55023103 - 55023032
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||| |||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  55023103 ggaactttagatactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 55023032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 12037993 - 12038058
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||||||||||| |  ||||||||||    
T  12037993 tgttgttgtgatctgattatgctgct-ttgttatttaactaagttgcatgagtttatataagatgat 12038058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 23077518 - 23077584
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||  |||| |||| ||||||||||| ||||||||||||||||  ||||||||||    
T  23077518 tgttgttgtgatctgcctatgttgctgttgttatttaaccaagttgcatgagtctatataagatgat 23077584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 322829 - 322772
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||| ||||| |||||||||||||| |||||| ||| |||||||||| |||||||    
T  322829 ttaggtagtaatgtgacctatttaagatgttaactaagatctgtgaagctgttatgaa 322772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 3833909 - 3833844
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||  | |||| ||||||||||| | |||||||    
T  3833909 aaggaactttaggtactaatgtgacctattaaagatgatgactgtgaactgtgaagtttttatgaa 3833844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 11165402 - 11165443
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactg 48  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  11165402 ggaactttaggtactaatgagacctatctaagatgttaactg 11165443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 11298568 - 11298621
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  11298568 tgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 11298621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 12511137 - 12511084
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  12511137 tgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 12511084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 15051584 - 15051531
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||| |||  ||||||||||||||||||||| |||||||||||||||    
T  15051584 tgttgttgtgaactgcctatgctgctattgttatttaaccaagttgcatgagtc 15051531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 15060360 - 15060307
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||| |||  ||||||||||||||||||||| |||||||||||||||    
T  15060360 tgttgttgtgaactgcctatgctgctattgttatttaaccaagttgcatgagtc 15060307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 16909818 - 16909765
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||| ||| ||||||| |||||||||||||| |||||||||||||||    
T  16909818 tgttgttgtgaactgcttatgctactattgttatttaaccaagttgcatgagtc 16909765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 18383795 - 18383852
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||| ||||| |||||||||||||| |||||||||| | |||||||| |||||||    
T  18383795 ttaggtagtaatgtgacctatttaagatgttaactgagatcagtgaagctgttatgaa 18383852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 46822345 - 46822292
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  46822345 tgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 46822292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 11557425 - 11557477
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||    
T  11557425 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagt 11557477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 14499559 - 14499491
Alignment:
Q  9 aactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 77  Q
    ||||||||||| ||||||||||||| |||||| |||||||  |  |||||||||||  |||||||||||    
T  14499559 aactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaa 14499491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 16750604 - 16750689
Alignment:
Q  148 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| |||||||||  |||| |||  |||||||||||| ||||||||||||  |||||||| || | |||||||| ||||||    
T  16750604 aaatgaattgttattaagct--tgatatgaattgattatgctgcaattgttatttaactaagttgcaagaatatgaataagttgatga 16750689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 17242071 - 17241990
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 224  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  17242071 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 17241990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 23408506 - 23408438
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||| ||| |||||  |||| ||||||||||| |||| ||||||||||||||| | ||||||||||    
T  23408506 gctgttgttgtaatctgtctatgttgctattgttaattaaccaagttgcatgagtcagtataagatgat 23408438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 11595017 - 11595064
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  11595017 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 11595064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 11595186 - 11595233
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  11595186 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 11595233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 11851657 - 11851603
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||||| |||||||| |||| |||||||||  |||||||||||||||    
T  11851657 tgttgttgtgatctaattatgctactatcgttatttaactaagttgcatgagtct 11851603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 12496495 - 12496446
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  12496495 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 12496446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 16369476 - 16369423
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||| |||  |||||||||||||||| |||| |||||||||||||||    
T  16369476 tgttgttgtgaactgcctatgctgctattgttacttaaccaagttgcatgagtc 16369423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 3833742 - 3833678
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||||||    
T  3833742 tgtgatttgattatgctgcaaatgttatttaactaagttgcatgtctatgaataagctgatgatg 3833678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 11298407 - 11298443
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactga 49  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  11298407 ttaggtagtaatgtgacctatttaagatattaactga 11298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 14878574 - 14878610
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||||||||||||||||||  ||||||||||||||    
T  14878574 tatgctgctattgttatttaactaagttgcatgagtc 14878610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 15941912 - 15941985
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatg 216  Q
    ||||||||||||| ||| ||||||  |  ||||||||| |||||||||||| | ||||||||||  ||||||||||    
T  15941912 ttgttgaaaatgatttgttattaaatt--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatg 15941985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 66415 - 66511
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  66415 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 66511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 66286 - 66359
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  66286 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 66359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 53671 - 53575
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  53671 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 53575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 53800 - 53727
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53800 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 53727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 65838 - 65891
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||    
T  65838 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagt 65891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 17804303 - 17804207
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  17804303 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 17804207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 22430030 - 22430131
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||| ||||||    
T  22430030 caagaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctatagttaattaactaagttgcatgagtctgaatatgatgat 22430129  T
Q  234 ga 235  Q
    ||    
T  22430130 ga 22430131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 25767168 - 25767264
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  25767168 caagaagttgttgaagatgaattgatattaagctgttggtgtgatctgattatgctgctattgttacttaactaagttgcatgagtctgaataagat 25767264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 17804432 - 17804359
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17804432 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 17804359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 25767039 - 25767112
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25767039 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaaactattatgaaatgctaag 25767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 22863048 - 22862967
Alignment:
Q  138 aagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  22863048 aagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 22862967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 1644808 - 1644726
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||  |||||||||||||    
T  1644808 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgccattgttattaaactaagttgcatgagt 1644726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 8243964 - 8243882
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  8243964 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 8243882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 11566965 - 11566883
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  11566965 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 11566883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 14472373 - 14472292
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||  |||||||||||||    
T  14472373 gaagttgttgaaaatgaattgatattaagctgttgatatgatctaattatgctgctattgtta-ttaactaagttgcatgagt 14472292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 19870693 - 19870611
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  19870693 gaagttgttgaaaatgaattgataataagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 19870611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 23395171 - 23395089
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  23395171 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 23395089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 18955764 - 18955848
Alignment:
Q  135 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||  |||||||||||||    
T  18955764 aagaagttattgaaaatgaattgatattaagttgttgatatgatccgattatgctgctattgttattaaactaagttgcatgagt 18955848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 27415814 - 27415886
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  27415814 aggaaccttaggtactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag 27415886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 12706926 - 12706851
Alignment:
Q  3 ggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||    
T  12706926 ggaagaaactttaggtactaatgagacctattaaagatattgactgagaactgtgaagcttttatgaaatgttaag 12706851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 18917269 - 18917351
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||  ||||||||| |||| | |||||||||||||||||||||||  |||||||||||||    
T  18917269 gaagttgttgaaaatgaattgatattgggctgttgatatgatataattatgctgctattgttatttaactaagttgcatgagt 18917351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 23990023 - 23989941
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  23990023 gaagttgttgaaaatgaattggtaataagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 23989941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 12706794 - 12706692
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatga 232  Q
    |||||| ||| ||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||| |||| |||    
T  12706794 caagaaattgctgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaattaagttga 12706697  T
Q  233 tgatg 237  Q
    |||||    
T  12706696 tgatg 12706692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 23414749 - 23414649
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  23414749 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 23414653  T
Q  234 gatg 237  Q
    ||||    
T  23414652 gatg 23414649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 27556507 - 27556407
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  27556507 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 27556411  T
Q  234 gatg 237  Q
    ||||    
T  27556410 gatg 27556407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 5616816 - 5616917
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||||||| ||| ||||| ||| |||||| ||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  5616816 caagaagttgctgagaatgatttgttattaaact--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 5616913  T
Q  234 gatg 237  Q
    ||||    
T  5616914 gatg 5616917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 27325650 - 27325714
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  27325650 ctgttgatgtgatatgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 27325714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 16741438 - 16741368
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||| |||||||||| ||||    
T  16741438 gaactttaggtactagtgagacctattaaagatattgactgagaattgtgaagcttttatgaaatgttaag 16741368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 12618850 - 12618929
Alignment:
Q  139 agttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||| ||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  12618850 agttgttgaaa-tgaattggtatcaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 12618929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 18955636 - 18955707
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  || |||||||||||  ||||||||||||    
T  18955636 ggaactttaggtactaatgagacctatataagatgttaactgttaattgtgaagctatattgaaatgctaag 18955707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 22429903 - 22429974
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||  |  ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  22429903 ggaactttaggttatggtgagacctatttaagatgttagctgagaactgtgaagttattatgaaatgctaag 22429974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 16523425 - 16523478
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  16523425 gttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 16523478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 18180570 - 18180517
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  18180570 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 18180517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 18907189 - 18907133
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  18907189 gctgttgttgtgatctgattatgctgctattgttatttaactaagctgcatgagtct 18907133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 21702359 - 21702291
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| ||||| |||||| ||||||||||||| ||||||||||| | |||||||| ||||||||    
T  21702359 ttgatgtgatttgattttgctgcaattgttatttaattaagttgcatgattatgaataagttgatgatg 21702291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 14472503 - 14472432
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  14472503 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 14472432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 19873197 - 19873130
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  19873197 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 19873130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 1644359 - 1644293
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  1644359 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 1644293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 31478265 - 31478331
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  31478265 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 31478331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 1587602 - 1587659
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||||||||| ||||||||||||| | | |||||| ||||||||||||||||||    
T  1587602 aaggaactttaggtgctaatgagacctaataatgatattgactgagaactgtgaagct 1587659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 19863037 - 19862988
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  19863037 tatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 19862988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 1587766 - 1587833
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||||    
T  1587766 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatgatg 1587833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 15041589 - 15041656
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatga 232  Q
    ||||||| |||||||||  |||||| ||||||||||||||  |||||||||||||||  |||||||||    
T  15041589 gctgttgttgtgatctgcctatgctactattgttatttaactaagttgcatgagtctttataagatga 15041656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 19790826 - 19790873
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  19790826 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtc 19790873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 19848034 - 19848089
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  19848034 gctgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 19848089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 22592679 - 22592730
Alignment:
Q  9 aactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    ||||||||||||||||| |||||||| |||||| |||||| |||||||||||    
T  22592679 aactttaggtactaatgtgacctattaaagataataactgtgaactgtgaag 22592730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 22863179 - 22863108
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  ||||||||| |  ||||||||||||    
T  22863179 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctgtattgaaatgctaag 22863108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 2685326 - 2685421
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctg-aataagatgatgatg 237  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | |||||||||||||| |||||| ||||||||    
T  2685326 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaaataagttgatgatg 2685421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 15894479 - 15894545
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||  ||||||||||    
T  15894479 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtctatataagatgat 15894545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 20803427 - 20803489
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||| ||||||||||||| | | |||||| ||| |||||||||||||| |||||||    
T  20803427 gaactttaggtgctaatgagacctaataatgatattgacttagaactgtgaagcttttatgaa 20803489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 20908022 - 20908076
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  20908022 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 20908076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 27553612 - 27553666
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||||||||||||||||| ||||| |||||  |||||||||||||||    
T  27553612 tgttgttgtgatctgattatgctgctgttgttctttaactaagttgcatgagtct 27553666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 12496543 - 12496486
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||||||||||| | |||||||||||| |||||| | |||| |||||||||||||    
T  12496543 aaggaactttaggtagttatgagacctattaaagataatgactgtgaactgtgaagct 12496486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 16523281 - 16523330
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||| ||||| |||||||||||||| |||||||||| ||||||||||    
T  16523281 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagct 16523330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 22408345 - 22408398
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||| |||||||||||||| ||||| ||||||||||| ||||||||| ||||||    
T  22408345 gttgttgtgatctgattatactgcttttgttatttaaccaagttgcacgagtct 22408398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 22432308 - 22432259
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  22432308 tatgctgctattgttaattaaccaagttgcatgagtcggtataagatgat 22432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 22438858 - 22438809
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  22438858 tatgctgctattgttaattaaccaagttgcatgagtcggtataagatgat 22438809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 27416232 - 27416289
Alignment:
Q  180 tgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||||| ||||||||||||  ||||||||||||| |||||| | ||||||||    
T  27416232 tgattatgctgcaattgttatttaactaagttgcatgagtatgaatatgttgatgatg 27416289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 2685190 - 2685246
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||||| ||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  2685190 aaggaactctaggtgctagtgagacctattagagatattgactgagaactgtgaagc 2685246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 12496376 - 12496312
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||||||    
T  12496376 tgtgatctgattatgctgcaaatgttatttaactaagttgcatgtctatgaataagctgatgatg 12496312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 19662868 - 19662787
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 224  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  19662868 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 19662787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 25135706 - 25135774
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||| ||||||| | |||||||||||  |||||||||| | |||||||| ||||||||    
T  25135706 ttgatgtgatttgataatgctgcaaatgttatttaattgagttgcatgattatgaataagttgatgatg 25135774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 19790657 - 19790704
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  19790657 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 19790704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 20803589 - 20803656
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||| ||  ||| ||||||| | |||||||| ||||||||    
T  20803589 tgatgtgatttgattatgctgcaattgttattaaactaagctgcatgaatatgaataagttgatgatg 20803656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 23992509 - 23992454
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||| |||||  ||||||||||||||||||||   ||||||||||||||    
T  23992509 gctgttgatgtaatctgcctatgctgctattgttatttagctaagttgcatgagtc 23992454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 25642227 - 25642294
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||| |||||  ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  25642227 ctgttgttgtaatctgtctatgctgctattgttatttaacctagttgcatgagtcgatataagatgat 25642294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 9482164 - 9482229
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| || ||||| |||||| | ||||  |||||||||| | |||||||    
T  9482164 aaggaactttaggtactaatgtgaactattaaagataatgactgtaaactgtgaagtttttatgaa 9482229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 21766771 - 21766718
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||  |||| ||||||||||||||||  ||||||||||||||    
T  21766771 tgttgttgtgatctgcctatgttgctattgttatttaactaagttgcatgagtc 21766718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 22334955 - 22335004
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  22334955 tatgctgctattgttatttaacctagttgcatgagtcgatataagatgat 22335004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 23657468 - 23657513
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgag 218  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||    
T  23657468 tgtgatctgattatgctgctgctgttatttaactaagttgcatgag 23657513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 16624222 - 16624137
Alignment:
Q  148 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| ||||||| |  |||| |||  |||||||||||| ||||||||||||  |||||||| || | |||||||| ||||||    
T  16624222 aaatgaattgttattaagtt--tgatatgaattgattatgctgcaattgttatttaactaagttgcaagaatatgaataagttgatga 16624137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 19662996 - 19662948
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  19662996 ttaggtgctagtgagacctattggagatattgactgagaactgtgaagc 19662948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 20907854 - 20907894
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaact 47  Q
    ||||||||||||| |||||| ||||||||||||| ||||||    
T  20907854 ggaactttaggtagtaatgaaacctatttaagatgttaact 20907894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 27567656 - 27567704
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||||||||||||||||  ||||||||||  |||||| ||||||||    
T  27567656 tgtgatctgattatgctgctgctgttatttaactaagttgtatgagtct 27567704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 24735509 - 24735413
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  24735509 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 24735413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 24735638 - 24735565
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24735638 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 24735565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 10101648 - 10101730
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  10101648 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 10101730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 19688630 - 19688700
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19688630 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 19688700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 24649460 - 24649378
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  24649460 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 24649378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 12901515 - 12901597
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||||    
T  12901515 gaagttgttgaaaatgaattgatattaagctgttgatatgatccgattatgctgttattgttatttaactaagttgcatgagt 12901597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 27379436 - 27379518
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||    
T  27379436 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttgcatgagt 27379518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 27383482 - 27383564
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||    
T  27383482 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttgcatgagt 27383564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 27601899 - 27601817
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  27601899 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 27601817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 24628482 - 24628564
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||||  ||||| |||||||    
T  24628482 gaagttgttgaaaatgaattggtattaagctgttaatataatctgattatgctgctattgttatttaactaagttacatgagt 24628564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 31344981 - 31344881
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||| ||||||||  ||||||||||||| |||||||| ||||    
T  31344981 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattattatttaactaagttgcatgagtatgaataagttgat 31344885  T
Q  234 gatg 237  Q
    ||||    
T  31344884 gatg 31344881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 37524751 - 37524684
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||  | |||||||||    
T  37524751 tgttgatgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtctatacaagatgatg 37524684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 24716569 - 24716622
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  24716569 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 24716622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 21318683 - 21318731
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  21318683 tgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtct 21318731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 21327614 - 21327662
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  21327614 tgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtct 21327662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 41667021 - 41666953
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  41667021 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 41666953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 10101518 - 10101589
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  10101518 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 10101589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 22811952 - 22812006
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||| |||||||||||||||||||||||||  |||||||||||||||    
T  22811952 tgttgttgtgatttgattatgctgctattgttatttaactaagttgcatgagtct 22812006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 19928373 - 19928438
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  19928373 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 19928438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 25961575 - 25961628
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  25961575 tgttgttgtgatctgattatgctgctgttgttatttaactaagttgcatgagtc 25961628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 27263508 - 27263451
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||||||||| ||||||||||||| | | |||||| ||||||||||||||||||    
T  27263508 aaggaactttaggtgctaatgagacctaataatgatattgactgagaactgtgaagct 27263451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 18855332 - 18855396
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    |||||||||||||| ||| |||||||||||  ||||| | |||||||||||||||||| ||||||    
T  18855332 aaggaactttaggtgctagtgagacctattagagataatgactgagaactgtgaagcttttatga 18855396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 23187302 - 23187246
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    |||||||||||||||||||||| |||||| | |||| ||||||||||||| ||||||    
T  23187302 ttaggtactaatgagacctattaaagataatgactgtgaactgtgaagcttttatga 23187246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 23598565 - 23598509
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    |||||||||||||||||||||| |||||| | |||| ||||||||||||| ||||||    
T  23598565 ttaggtactaatgagacctattaaagataatgactgtgaactgtgaagcttttatga 23598509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 24673639 - 24673579
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||| || ||||||||||||||||||| || |||||||||||||| | ||||||||    
T  24673639 tgtgatctgcttgtgctgctattgttatttaaccatgttgcatgagtctgtacaagatgat 24673579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 24869950 - 24869902
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||    
T  24869950 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtct 24869902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 23187146 - 23187079
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||| |||| |||||||||||| ||||||||| || |||||| ||||||| |||||||| ||||||||    
T  23187146 tgatatgatttgattatgctgcaattgttattaaaccaagttccatgagtatgaataagttgatgatg 23187079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 23598409 - 23598342
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||| |||| |||||||||||| ||||||||| || |||||| ||||||| |||||||| ||||||||    
T  23598409 tgatatgatttgattatgctgcaattgttattaaaccaagttccatgagtatgaataagttgatgatg 23598342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 27263343 - 27263276
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||||    
T  27263343 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatgatg 27263276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 40428708 - 40428645
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||  |||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  40428708 ggaacttagggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 40428645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 24174876 - 24174822
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  24174876 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 24174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 61050 - 60993
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||||||||| ||||||||||||| | | |||||| || |||||||||||||||    
T  61050 aaggaactttaggtgctaatgagacctaataatgatattgaccgagaactgtgaagct 60993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 22799167 - 22799220
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  22799167 tgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 22799220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 22461196 - 22461277
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 224  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  22461196 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 22461277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 24680258 - 24680198
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||| || ||||||||||||||||||| || ||||| |||||||| | ||||||||    
T  24680258 tgtgatctgcttgtgctgctattgttatttaaccatgttgcttgagtctgtacaagatgat 24680198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 25963749 - 25963809
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||| ||||||| |||||||||  |||||||||||||||||| ||  ||||||||||||||    
T  25963749 attatgctgttgttgtgatctgcctatgctgctattgttattgaactaagttgcatgagtc 25963809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 22741004 - 22741071
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||| |||||  ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  22741004 ctgttgttgtaatctgtctatgctgctattgttatttaacctagttgcatgagtcgatataagatgat 22741071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 22758759 - 22758826
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||| |||||  ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  22758759 ctgttgttgtaatctgtctatgctgctattgttatttaaactagttgcatgagtcgatataagatgat 22758826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 24716403 - 24716454
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtga 58  Q
    ||||||||||||| || ||||||||||||||||| |||||||| | ||||||    
T  24716403 ggaactttaggtagtagtgagacctatttaagatgttaactgaaacctgtga 24716454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 25616267 - 25616212
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||| |||||  |||||||||||||| ||||||  ||||||||||||||    
T  25616267 gctgttgatgtaatctgcctatgctgctattgtaatttaactaagttgcatgagtc 25616212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 23038108 - 23038054
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||    
T  23038108 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagctgcatgagtc 23038054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 24655379 - 24655433
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  24655379 tgttgttgtgatctgattatgttgctgctgttatttaactaagttgcatgagtct 24655433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 40622251 - 40622317
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||| |||||  |||||||||||||||||| || |||||||||||||||   ||||||||||    
T  40622251 tgttgttgtaatctgcctatgctgctattgttattcaaccaagttgcatgagtcgatataagatgat 40622317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 21918194 - 21918243
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  21918194 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 21918243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 18855468 - 18855541
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatg 216  Q
    ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | |||| |||||  ||||||||||    
T  18855468 ttgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttgtttaactaagttgcatg 18855541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 19928503 - 19928604
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||| ||||| ||| |||||| |   ||||||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||  ||||    
T  19928503 caagaaattgttgagaatgatttgttattaaacc--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtttatgaataatctgat 19928600  T
Q  234 gatg 237  Q
    ||||    
T  19928601 gatg 19928604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 21916145 - 21916193
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||||||||||| || | |||||||||||  |||||||||||||||    
T  21916145 tgtgatctgattatgttgtttttgttatttaactaagttgcatgagtct 21916193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 22461068 - 22461116
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  22461068 ttaggtgctagtgagacctattggagatattgactgagaactgtgaagc 22461116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 22634422 - 22634525
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||| ||||    
T  22634422 caagaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgcgtctgaataagttgat 22634521  T
Q  234 gatg 237  Q
    ||||    
T  22634522 gatg 22634525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 36133965 - 36134058
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  36133965 gaagttgttgaagatgaatggatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 36134058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 9556633 - 9556551
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  9556633 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 9556551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 17810375 - 17810293
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  17810375 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 17810293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 4561337 - 4561419
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  4561337 gaagttgttgaaaataaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 4561419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 14757425 - 14757507
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  14757425 gaagttgttgaaaatgaattgatattaagttgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 14757507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 36133837 - 36133906
Alignment:
Q  9 aactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36133837 aactttaggtattaatgagacctatttaagatattaactgggaactgtgaagctattatgaaatgctaag 36133906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 1951762 - 1951864
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatga 232  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||| |||| |||    
T  1951762 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaattaagttga 1951859  T
Q  233 tgatg 237  Q
    |||||    
T  1951860 tgatg 1951864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 27534131 - 27534047
Alignment:
Q  135 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||  |||||||||||||    
T  27534131 aagaagttattgaaaatgaattgatattaagctgttgatatgatccgattatgctgttattgttattaaactaagttgcatgagt 27534047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 1951632 - 1951699
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaat 72  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  1951632 aaggaactttaggtactaatgagacctaataaagatattaactgagaactgtgaagcttttatgaaat 1951699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 18222386 - 18222468
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 225  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  18222386 ttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 18222468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 43256033 - 43256105
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||    
T  43256033 aggaaccttaggtactaatgagacctatttaagatgttaactgggaactgtgaagctattgtgaaatgttaag 43256105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 5756941 - 5757023
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||| ||||||| | |||||||||||||| |||||||||||||  ||||| |||||||    
T  5756941 gaagttgttgaaaatgaattggtattaagttgttgatataatctgattatgctgttattgttatttaactaagttacatgagt 5757023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 43256414 - 43256514
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||| | ||||||||||||  ||||||||||||| |||||||| ||||    
T  43256414 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctacaattgttatttaactaagttgcatgagtatgaataagttgat 43256510  T
Q  234 gatg 237  Q
    ||||    
T  43256511 gatg 43256514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 17152354 - 17152431
Alignment:
Q  1 agggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||  |||||||||||||| |||||||| |||||||||||||||| | |||||| ||| ||||    
T  17152354 agggaaggaactttaggtgttaatgagacctattaaagatattgactgagaactgtgaagattttatgatatgttaag 17152431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18222249 - 18222322
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||| ||||||||||||||| |||||| | |||||||||||||||||| |||||| ||| ||||    
T  18222249 aaggaactttaggtgctaatgagacctattaaagataatgactgagaactgtgaagcttttatgatatgttaag 18222322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 33742478 - 33742399
Alignment:
Q  139 agttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||| ||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  33742478 agttgttgaaa-tgaattggtatcaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 33742399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 3412869 - 3412802
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||||||||| |||||||| ||||||||    
T  3412869 tgatgtgatttgattatgctgctattgttattaaactaagttgcatgagtatgaataagttgatgatg 3412802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 17152501 - 17152589
Alignment:
Q  148 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatgatgatg 237  Q
    |||||||||| |||||||||  ||||||||| |||||||||||| | ||||||||||  |||||||||||||||||| |||| ||||||||    
T  17152501 aaatgaattgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgagtctgaattaagttgatgatg 17152589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 18236962 - 18236895
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||||||    
T  18236962 tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgatgatg 18236895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 18228861 - 18228956
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatgatgatg 237  Q
    |||||| |||||||||| ||| |||||  ||||||||| |||||||||||| ||| ||||||||  |||||||||||||||||| |||| ||||||||    
T  18228861 ttgttggaaatgaattgttatgaagct--tgatgtgatttgattatgctgcaatttttatttaactaagttgcatgagtctgaattaagttgatgatg 18228956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 18228724 - 18228781
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||||    
T  18228724 aaggaactttaggtgctaatgagacctattaaagataatgactgagaactgtgaagct 18228781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 20157501 - 20157554
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||||||||||||||||||||||||||||||||||  || ||||||||||||    
T  20157501 gttgatgtgatctgattatgctgctattgttatttaactaatttgcatgagtct 20157554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 28569477 - 28569546
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  28569477 gttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 28569546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 9530668 - 9530604
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    ||||||| |||||||||||||||||||||| |||||| | || ||||||||||||||| ||||||    
T  9530668 aaggaaccttaggtactaatgagacctattaaagataatgaccgagaactgtgaagcttttatga 9530604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 14708668 - 14708736
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  14708668 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 14708736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 16488124 - 16488172
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  16488124 tgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 16488172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 26243666 - 26243767
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||    
T  26243666 caagaaattgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtttatgaataagctgat 26243763  T
Q  234 gatg 237  Q
    ||||    
T  26243764 gatg 26243767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 14757295 - 14757366
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  14757295 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 14757366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 27534258 - 27534188
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||||||||||||||| | |||| |||||||  || |||||||||||  ||||||||||||    
T  27534258 gaactttaggtactaatgagacctatctgagatgttaactgttaattgtgaagctatattgaaatgctaag 27534188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 16243271 - 16243336
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  16243271 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 16243336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 19757472 - 19757537
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  19757472 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 19757537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 19782334 - 19782269
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  19782334 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 19782269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 23139369 - 23139275
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||||||    
T  23139369 ttgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtttatgaataagctgatgatg 23139275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 26243536 - 26243601
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||  |||||||    
T  26243536 aaggaactttaggtgctagtgagacctattagagatattgactgagaactgtgaagcctttatgaa 26243601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 3413030 - 3412975
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||| |||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  3413030 aggaaccttaggtactaatgagacctattaaagatattga-tgagaactgtgaagct 3412975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 13813069 - 13813113
Alignment:
Q  177 atctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||||||||||||||||||||||||  |||||||||||||||    
T  13813069 atctgattatgctgctattgttatttaactaagttgcatgagtct 13813113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 16243401 - 16243502
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||| ||||| ||| |||||| |   ||||||||| |||||||||||| | ||||||||||  |||||||||| || |||||||| ||||    
T  16243401 caagaaattgttgagaatgatttgttattaaacc--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtgtatgaataagctgat 16243498  T
Q  234 gatg 237  Q
    ||||    
T  16243499 gatg 16243502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 16348697 - 16348757
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||| ||||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  16348697 attatgctgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 16348757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 16356985 - 16357045
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||| ||||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  16356985 attatgctgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 16357045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 23139505 - 23139449
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  23139505 aaggaactttaggtgctagtgagacctattagagatattgactgagaactgtgaagc 23139449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 2014849 - 2014782
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| | ||||||||||  |||||||||| || |||||||| ||||||||    
T  2014849 tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtgtatgaataagctgatgatg 2014782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 17810505 - 17810434
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||| ||||    
T  17810505 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgttaag 17810434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 12570090 - 12570024
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||  ||||||||||    
T  12570090 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtctatataagatgat 12570024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 15224866 - 15224800
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| || | |||||||| ||||||    
T  15224866 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagaatatgaataagttgatga 15224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 42997484 - 42997552
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| | ||||||||||   |||||||||| | |||||||| ||||||||    
T  42997484 ttgatgtgatttgattatgctgcaaatgttatttaactgagttgcatgattatgaataagttgatgatg 42997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 25555550 - 25555503
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  25555550 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 25555503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 2015010 - 2014948
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||||| | |||||||| |||||| | |||| ||||||||||| | |||||||    
T  2015010 gaactttaggtactaaggtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 2014948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 15353348 - 15353402
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  15353348 tgttgctgtgatctgattatgttgctgctgttatttaactaagttgcatgagtct 15353402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 18602624 - 18602674
Alignment:
Q  13 ttaggtactaatgagacctatttaaga-tattaactgagaactgtgaagct 62  Q
    |||||||||||| ||||||||| |||| |||| ||||||||||||||||||    
T  18602624 ttaggtactaataagacctattaaagaatattgactgagaactgtgaagct 18602674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 18609218 - 18609268
Alignment:
Q  13 ttaggtactaatgagacctatttaaga-tattaactgagaactgtgaagct 62  Q
    |||||||||||| ||||||||| |||| |||| ||||||||||||||||||    
T  18609218 ttaggtactaataagacctattaaagaatattgactgagaactgtgaagct 18609268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 16348543 - 16348592
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  16348543 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 16348592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 16356831 - 16356880
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  16356831 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 16356880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 16487956 - 16488013
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||| ||||| | |||||||||||| |||| ||||| ||||||||||| ||||||    
T  16487956 ttaggtagtaatgtgtcctatttaagatgttaattgagatctgtgaagctactatgaa 16488013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 45938246 - 45938152
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||  ||| ||||||  | || ||||| ||||||||    
T  45938246 ttgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagatgcatgtctatgtataagctgatgatg 45938152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 19757639 - 19757703
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||||||    
T  19757639 tgtgatttgattatgctgcaaatgttatttaactaagttgcatgtttatgaataagctgatgatg 19757703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 19782167 - 19782103
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||||||    
T  19782167 tgtgatttgattatgctgcaaatgttatttaactaagttgcatgtttatgaataagctgatgatg 19782103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 76; Significance: 3e-35; HSPs: 5)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 13010 - 12907
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||| ||||    
T  13010 caagaaattgttgaagatgaattgatattaagctgttgatgtgatctgattatgctcctattgttaattaactaagttgcatgagtctgaataagttgat 12911  T
Q  234 gatg 237  Q
    ||||    
T  12910 gatg 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 19294 - 19191
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||| ||||    
T  19294 caagaaattgttgaagatgaattgatattaagctgttgatgtgatctgattatgctcctattgttaattaactaagttgcatgagtctgaataagttgat 19195  T
Q  234 gatg 237  Q
    ||||    
T  19194 gatg 19191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 13136 - 13066
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13136 gaactttaggtactaatgagacctatttaagatattaactgagaactgtggagctattatgaaatgctaag 13066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 19420 - 19350
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19420 gaactttcggtactaatgagatatatttaagatattaactgagaactgtggagctattatgaaatgctaag 19350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 62331 - 62264
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  62331 tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 62264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 23535588 - 23535690
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  23535588 caagaaattgttgaaa-tgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagtctgaataagttgat 23535686  T
Q  234 gatg 237  Q
    ||||    
T  23535687 gatg 23535690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 17410546 - 17410450
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  17410546 caagaagttgtcgaagatgaattgatattaagttgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 17410450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 15236783 - 15236865
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  15236783 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 15236865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 19472723 - 19472805
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  19472723 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 19472805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 20295950 - 20295868
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  20295950 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 20295868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 42805518 - 42805423
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatgatgatg 237  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||||| | |||||||||| ||||||||||||||||||| |||| ||||||||    
T  42805518 ttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaaccaagttgcatgagtctgaattaagttgatgatg 42805423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 23535460 - 23535533
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||    
T  23535460 aaggaaccttaggtactaatgagacctgtttaagatattaaatgagaactgtgaagcttctatgaaatgctaag 23535533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 18356561 - 18356489
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  18356561 aggaaccttagatactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag 18356489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 20911172 - 20911272
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  20911172 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 20911268  T
Q  234 gatg 237  Q
    ||||    
T  20911269 gatg 20911272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 18774439 - 18774374
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  18774439 aaggaactttaggtgctaatgagacctattaaagatattacctgagaactgtgaagcttttatgaa 18774374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 20910680 - 20910744
Alignment:
Q  14 taggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  20910680 taggtactaatgagacctatttaagatgttatctgaggactgtgaagctattgtgaaatgctaag 20910744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 18774308 - 18774206
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatga 232  Q
    |||||| ||||||||||||| ||| |||||||||  ||||||||| |||||||||||| ||||||||| ||  | |||||||||||||||| |||| |||    
T  18774308 caagaaattgttgaaaatgatttgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaattaagttga 18774211  T
Q  233 tgatg 237  Q
    |||||    
T  18774210 tgatg 18774206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 17718311 - 17718375
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| | |||||||    
T  17718311 aggaactttaggtactaatgagacctattaaagatattgactgtgaactgtgaagtttttatgaa 17718375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 18356061 - 18355961
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||| ||  ||||||||| |||||||| ||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  18356061 caagatgttgttgaaa-tgaattgttattaaact--tgatgtgatttgattatgttgcaattgttatttaactaagttgcatgagtatgaataagttgat 18355965  T
Q  234 gatg 237  Q
    ||||    
T  18355964 gatg 18355961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 18784150 - 18784049
Alignment:
Q  135 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatgat 233  Q
    ||||| ||||||||||||| ||| |||||||||  ||||||||| |||||||||||| ||||||||| ||  | |||||||||||||||| |||| ||||    
T  18784150 aagaaattgttgaaaatgatttgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaattaagttgat 18784053  T
Q  234 gatg 237  Q
    ||||    
T  18784052 gatg 18784049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 20232781 - 20232729
Alignment:
Q  9 aactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  20232781 aactttaggtactaataagacctatttaagatattgactgagaactgtgaagc 20232729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 21366705 - 21366759
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  21366705 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 21366759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 1859017 - 1859070
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  1859017 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 1859070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 18784282 - 18784217
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||| ||||||||||| ||| |||||||| |||||||||||||| ||| |||||||    
T  18784282 aaggaactttaggtgctaatgagaccaattaaagatattgactgagaactgtgaggcttttatgaa 18784217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 23451424 - 23451371
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  23451424 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 23451371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 40723607 - 40723672
Alignment:
Q  154 attgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||| ||  |||||||||||||    
T  40723607 attgatattaagttgttgatatgatccgattatgctgctattgttattaaactaagttgcatgagt 40723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 42805655 - 42805582
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||| | | ||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  42805655 aaggaactttaggtgccattgagacctattaaagatattgactgagaactgtgaagcttttatgatatgttaag 42805582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 21885223 - 21885291
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  21885223 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 21885291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 24767588 - 24767652
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| | |||  ||||||||||    
T  24767588 ttgatgtgatctgattatgctgctattgttatttaactaagttgcataaatctatataagatgat 24767652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 26742617 - 26742681
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    |||||||||||||| | | ||||||||||| |||||||| |||||||||||||||||| ||||||    
T  26742617 aaggaactttaggtgccattgagacctattaaagatattgactgagaactgtgaagcttttatga 26742681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 20232649 - 20232554
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctg-aataagatgatgatg 237  Q
    ||||||| ||||||||| |||||||||  ||||||||| |||||||||||| ||||||||| ||  | ||||||| |||||| |||||| ||||||||    
T  20232649 ttgttgagaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactatgttgcataagtctgaaataagttgatgatg 20232554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 21340782 - 21340869
Alignment:
Q  149 aatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctg-aataagatgatgatg 237  Q
    ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||  |||||||||||||||| |||||| ||||||||    
T  21340782 aatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgagtctgaaataagttgatgatg 21340869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 26742754 - 26742849
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatgatgatg 237  Q
    ||||||| ||||| ||| ||||||||   ||||||||| |||||||||||| | ||||||||||  |||||||||||||||||| |||| ||||||||    
T  26742754 ttgttgagaatgagttgttattaagcc--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgagtctgaactaagttgatgatg 26742849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 23458668 - 23458615
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||    
T  23458668 tgttgttgtgatctgattatgcttcttttgttatttaaccaagttgcatgagtc 23458615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 23462929 - 23462876
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||    
T  23462929 tgttgttgtgatctgattatgcttcttttgttatttaaccaagttgcatgagtc 23462876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 33409463 - 33409398
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  33409463 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 33409398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 17410682 - 17410646
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagata 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  17410682 aaggaactttaggtactaatgagacctatttaagata 17410646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 26680652 - 26680604
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||    
T  26680652 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtct 26680604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 26952259 - 26952211
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||    
T  26952259 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtct 26952211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 4036290 - 4036223
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||||    
T  4036290 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatgatg 4036223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 25229441 - 25229508
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||||    
T  25229441 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatgatg 25229508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 25293597 - 25293664
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||||    
T  25293597 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatgatg 25293664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 10753015 - 10752949
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| | |||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  10753015 ttgatgtgatttaattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 10752949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 26666138 - 26666233
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctg-aataagatgatgatg 237  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | |||||||||||||| |||||| ||||||||    
T  26666138 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaaataagttgatgatg 26666233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 26937735 - 26937830
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctg-aataagatgatgatg 237  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | |||||||||||||| |||||| ||||||||    
T  26937735 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaaataagttgatgatg 26937830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 123346 - 123399
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  123346 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 123399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 21366544 - 21366593
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||| ||||| |||||||||||||| |||||||||| ||||||||||    
T  21366544 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagct 21366593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 23201436 - 23201383
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||||||||||||||    
T  23201436 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtc 23201383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 26172536 - 26172468
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||||||  |||||| |||| | ||| |||| ||||||||    
T  26172536 ttgatgtgatttgattatgctgcaattgttatttaactaagttgaatgattatgattaagttgatgatg 26172468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26666002 - 26666058
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||||| ||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  26666002 aaggaactctaggtgctagtgagacctattagagatattgactgagaactgtgaagc 26666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26937599 - 26937655
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||||| ||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  26937599 aaggaactctaggtgctagtgagacctattagagatattgactgagaactgtgaagc 26937655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 31342217 - 31342169
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  31342217 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 31342169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 12028443 - 12028490
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  12028443 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 12028490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 12028612 - 12028659
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  12028612 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 12028659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 15236653 - 15236724
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||| || |||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  15236653 ggaacctttggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 15236724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 17517240 - 17517295
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||| |||||  |||||||||||||||||| ||  ||||||||||||||    
T  17517240 gctgttgatgtaatctgcctatgctgctattgttattaaactaagttgcatgagtc 17517295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 17919198 - 17919245
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  17919198 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 17919245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 20805622 - 20805575
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  20805622 tgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 20805575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 23451590 - 23451539
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtga 58  Q
    ||||||||||||| || ||||||||||||||||| |||||||| | ||||||    
T  23451590 ggaactttaggtagtagtgagacctatttaagatgttaactgaaatctgtga 23451539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 23458834 - 23458783
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtga 58  Q
    ||||||||||||| || ||||||||||||||||| |||||||| | ||||||    
T  23458834 ggaactttaggtagtagtgagacctatttaagatgttaactgaaatctgtga 23458783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 23463095 - 23463044
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtga 58  Q
    ||||||||||||| || ||||||||||||||||| |||||||| | ||||||    
T  23463095 ggaactttaggtagtagtgagacctatttaagatgttaactgaaatctgtga 23463044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 23501415 - 23501462
Alignment:
Q  186 tgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||| |||||||||||||||   ||||||||||    
T  23501415 tgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 23501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 25229277 - 25229332
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    |||||||||||||| ||||||||||||| | | |||||| ||||||||||| ||||    
T  25229277 aaggaactttaggtgctaatgagacctaataatgatattgactgagaactgagaag 25229332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 25293433 - 25293488
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    |||||||||||||| ||||||||||||| | | |||||| ||||||||||| ||||    
T  25293433 aaggaactttaggtgctaatgagacctaataatgatattgactgagaactgagaag 25293488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 16674384 - 16674322
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||||||| |||||||| |||||| | |||| ||||||| ||| | |||||||    
T  16674384 gaactttaggtactaatgtgacctattaaagataatgactgtgaactgtaaagtttttatgaa 16674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 24221953 - 24221899
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||  ||||||||||  | |||||||||||||    
T  24221953 tgttgttgtgatctgattatgctgctgctgttatttaactaggttgcatgagtct 24221899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 24533055 - 24533150
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctg-aataagatgatgatg 237  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||| ||| ||||||||| ||  | |||||||||||||| |||||| ||||||||    
T  24533055 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgttgcaattgttattaaactatgttgcatgagtctgaaataagttgatgatg 24533150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 26704152 - 26704098
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||    
T  26704152 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagctgcatgagtc 26704098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 26973885 - 26973831
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||    
T  26973885 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagctgcatgagtc 26973831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 4036455 - 4036398
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||||||||| ||||||||||||| | | |||||| ||  ||||||||||||||    
T  4036455 aaggaactttaggtgctaatgagacctaataatgatattgaccaagaactgtgaagct 4036398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 20767050 - 20766997
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||| ||  |||||||||||||||||||||  ||||||||||||||    
T  20767050 tgttgttgtgatttgcctatgctgctattgttatttaactaagttgcatgagtc 20766997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 24532919 - 24532992
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||| ||||| ||  |||||||||||  ||||||| |||||||||||||||||  |||||| || |||||    
T  24532919 aaggaactctaggtgcttgtgagacctattagagatattgactgagaactgtgaagcctttatgatatactaag 24532992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 21340638 - 21340694
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 61  Q
    |||||||||||||| ||| |||||||||||  ||||| | |||| ||||||||||||    
T  21340638 aaggaactttaggtgctagtgagacctattagagataatgactgggaactgtgaagc 21340694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 33409296 - 33409232
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||||||    
T  33409296 tgtgatttgattatgctgcaaatgttatttaactaagttgcatgtctatgaataagctgatgatg 33409232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 74; Significance: 5e-34; HSPs: 6)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 65528 - 65613
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  65528 caagaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 65613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 61615 - 61697
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  61615 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 61697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 80366 - 80300
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  80366 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 80300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 80945 - 80874
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  ||||||||| |  ||||||||||||    
T  80945 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctgtattgaaatgctaag 80874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 12839 - 12773
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||  ||||||| |||||||||| ||  |||||||||||||||  ||||||||||    
T  12839 tgttgttgtgatctgcctatgctgttattgttattgaactaagttgcatgagtctatataagatgat 12773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 80805 - 80736
Alignment:
Q  148 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||||| |||||||||  |||| |||  |||||||||||| ||||||||| ||  |||||||||||||    
T  80805 aaatgaattgttattaagct--tgatatgaattgattatgctgcaattgttattaaactaagttgcatgagt 80736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 18632 - 18735
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| || |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||    
T  18632 caagaaattattgaaaatgaattgttattaagctgttgatatgatctgattatgctgctattgttatttacctaagttgcatgagtctgaataagttgat 18731  T
Q  234 gatg 237  Q
    ||||    
T  18732 gatg 18735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 18505 - 18576
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||||  ||||||||||| |||||||| | |||||||||||||||| |||||||||||||||    
T  18505 ggaactttaggtactgctgagacctattaaagatattgaatgagaactgtgaagcttttatgaaatgctaag 18576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 3878 - 3960
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  3878 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 3960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 3748 - 3819
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| | |||| |||||||  |  |||||||||||  ||||||||||||    
T  3748 ggaactttaggtactaatgagacctatctgagatgttaactgttatttgtgaagctatattgaaatgctaag 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 2673 - 2775
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||  |||||||||||||||||||||| ||||    
T  2673 caagaaattgttgaaa-tgaattgttattaagctgttgatgtgatctgattatgctgcaattgttaattaactaagttgcatgagtctgaataagttgat 2771  T
Q  234 gatg 237  Q
    ||||    
T  2772 gatg 2775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 2547 - 2617
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  2547 gaactttaggtactaatgagacctatttaagatattaactgagaattgtgaagcttttatgaactgctaag 2617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 12525 - 12443
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||    
T  12525 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttacatgagt 12443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 12655 - 12584
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  12655 ggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 12584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 43251916 - 43251834
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  43251916 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 43251834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 19278286 - 19278368
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  19278286 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 19278368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 21972588 - 21972670
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  21972588 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 21972670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 21976673 - 21976755
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  21976673 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 21976755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 16231476 - 16231578
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatga 232  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||| |||| |||    
T  16231476 caagaatttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaattaagttga 16231573  T
Q  233 tgatg 237  Q
    |||||    
T  16231574 tgatg 16231578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16231346 - 16231419
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||    
T  16231346 aagggactttaggtactaatgagacctattaaagatattgactgagaactgtgaagcttttatgaaatgttaag 16231419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 21387177 - 21387077
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  21387177 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 21387081  T
Q  234 gatg 237  Q
    ||||    
T  21387080 gatg 21387077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 15603055 - 15603124
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||  | |||||||||    
T  15603055 gctgttgatgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtctatacaagatgatg 15603124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 22028792 - 22028719
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||| ||||    
T  22028792 aaggaactttaagtactaatgagacctattgaagatattgactaagaactgtgaagcttttatgaaatgttaag 22028719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 23834408 - 23834343
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||    
T  23834408 aaggaactttaggtactaatgagacctattaaagatattgactgagaactgtgaatcttttatgaa 23834343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 21383756 - 21383657
Alignment:
Q  135 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    |||| |||||||||| ||||||| |||||||||  ||||||||| |||||||| ||| ||||||||||||  ||||||||||||| |||||||| |||||    
T  21383756 aagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgttgcaattgttatttaactaagttgcatgagtatgaataagttgatg 21383660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 22045116 - 22045046
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  22045116 gaactttagatactaatgagacctattaaagatattgactgagaactgtgaagcttttatgagatgttaag 22045046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 15611507 - 15611576
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||  | |||||||||    
T  15611507 gctgttgatgtgatctgattatgctggttttgttatttaaccaagttgcatgagtctatacaagatgatg 15611576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18619713 - 18619640
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||| |||||| ||||||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  18619713 aaggaaccttaggtgctaatgagacctattaaagatattgactgagaactgtgaagcttttatgagatgttaag 18619640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 22044989 - 22044900
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 225  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| ||||| |||||| ||||||||  ||  |||||||||||||||||||    
T  22044989 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattgtgctgcaattgttatcaaactaagttgcatgagtctgaat 22044900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 14398123 - 14398210
Alignment:
Q  148 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| ||||||||| |  ||| ||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||||||    
T  14398123 aaatgaattgttattaagcttt--atgcgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgatgatg 14398210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 22010716 - 22010782
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||  | |||||||||    
T  22010716 gttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtctatacaagatgatg 22010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 30643332 - 30643386
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  30643332 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 30643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 30308625 - 30308682
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||    
T  30308625 aaggaactttaggtgctaatgagacctattaaagatattgactgagaactctgaagct 30308682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 22111954 - 22111904
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatg 187  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  22111954 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatg 22111904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 16861365 - 16861418
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||||||||||||| ||||||||||| | |||||||||||||    
T  16861365 tgttgttgtgatctgattatgctgcttttgttatttaaccgagttgcatgagtc 16861418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 17055412 - 17055481
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||| || |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  17055412 gttgatgttatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 17055481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 23846886 - 23846951
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  23846886 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 23846951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 32598750 - 32598682
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| ||||| |||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  32598750 ttgatgtgatttgattgtgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 32598682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 32605282 - 32605214
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| ||||| |||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  32605282 ttgatgtgatttgattgtgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 32605214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 18678141 - 18678196
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  18678141 gctgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 18678196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 32121814 - 32121759
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  32121814 gctgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 32121759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 16410287 - 16410361
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    |||| ||||||| |||||||||  ||||||||||||||||||| |  ||||||||||||||   |||||||||||    
T  16410287 attatgctgttgttgtgatctgcctatgctgctattgttatttcactaagttgcatgagtcattataagatgatg 16410361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 17353984 - 17354050
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  17353984 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 17354050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 24755790 - 24755724
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||  ||||||||||    
T  24755790 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtctatataagatgat 24755724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 19259632 - 19259685
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||| ||| ||||||| |||||||||||||| |||||||||||||||    
T  19259632 tgttgttgtgaactgcttatgctactattgttatttaaccaagttgcatgagtc 19259685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 23834277 - 23834175
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatga 232  Q
    |||||| ||||||| ||||| ||| |||||||||  ||||||||| ||| |||| ||| ||||||||| ||  | |||||||||||||||| |||| |||    
T  23834277 caagaaattgttgagaatgatttgttattaagct--tgatgtgatttgactatgatgcaattgttattaaactatgttgcatgagtctgaattaagttga 23834180  T
Q  233 tgatg 237  Q
    |||||    
T  23834179 tgatg 23834175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 39094965 - 39095018
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||| ||||||||| |||||||||||  ||||||||||||||    
T  39094965 tgttgttgtgatctgaatatgctgcttttgttatttaactaagttgcatgagtc 39095018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 20856472 - 20856518
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  20856472 tgtgatctgattatgctgct-ttgttatttaactaagttgcatgagtc 20856518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 16184796 - 16184730
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||| || |||||||||||||||| ||||| ||| |||||||| |||  ||||||||||    
T  16184796 tgttgttgtgatatgcttatgctgctattgttgtttaaccaacttgcatgattctatataagatgat 16184730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 20466079 - 20466133
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||||||  ||| |||||||||||||||||  |||||||||||||||    
T  20466079 tgttgttgtgatctgcctatactgctattgttatttaactaagttgcatgagtct 20466133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 15538683 - 15538618
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||||||| |||||||||||||||  ||||| | |||| |||| |||||| | |||||||    
T  15538683 aaggaactttaggtgctaatgagacctattagagataatgactgtgaacagtgaagattttatgaa 15538618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 17828590 - 17828684
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||| ||||  ||||||||||  | || ||||| ||||||||    
T  17828590 ttgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttaattaactaagttgcatgtctatgtataagctgatgatg 17828684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 20465917 - 20465982
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||| ||||| ||||||| |||||  |||||||  | |||||||||| |||||||||||||||    
T  20465917 ttaggtagtaatgtgacctatataagaggttaactgcaatctgtgaagctgttatgaaatgctaag 20465982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 377347 - 377295
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||| ||||||||| || |||||||||||||||||||  | |||||||||||    
T  377347 tgttgttgtgatctgcttgtgctgctattgttatttaactatgttgcatgagt 377295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 15531994 - 15531893
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||| ||||||||| |||||| |   || |||||| |||||||||||| | ||||||||||  ||||||||||  | || ||||| ||||    
T  15531994 caagaaattgttgagaatgaattgttattaaacc--tgttgtgatttgattatgctgcaaatgttatttaactaagttgcatgtctatgtataagctgat 15531897  T
Q  234 gatg 237  Q
    ||||    
T  15531896 gatg 15531893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 15538553 - 15538452
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||| ||||||||| |||||| |   || |||||| |||||||||||| | ||||||||||  ||||||||||  | || ||||| ||||    
T  15538553 caagaaattgttgagaatgaattgttattaaacc--tgttgtgatttgattatgctgcaaatgttatttaactaagttgcatgtctatgtataagctgat 15538456  T
Q  234 gatg 237  Q
    ||||    
T  15538455 gatg 15538452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 16410133 - 16410169
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactga 49  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  16410133 ttaggtagtaatgtgacctatttaagatattaactga 16410169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 17926739 - 17926799
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||| ||||||| | |||||||  |||||| ||||||||||||||  ||||||||||||||    
T  17926739 attatgctgttgttttgatctgcctatgctactattgttatttaactaagttgcatgagtc 17926799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 23847053 - 23847117
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||||||    
T  23847053 tgtgatttgattatgctgcaaatgttatttaactaagttgcatgtttatgaataagctgatgatg 23847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 39094814 - 39094858
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgaga 51  Q
    ||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  39094814 ggaacttaaggtagtaatgtgacctatttaagatgttaactgaga 39094858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 228374 - 228475
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| | ||||||||||||||| |||||||||  |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||| ||||    
T  228374 caagaaatagttgaaaatgaattgttattaagct--tgatgtgatctgattatgctgcaattgttatttaactaagttgcatgagtctgaataagttgat 228471  T
Q  234 gatg 237  Q
    ||||    
T  228472 gatg 228475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 228244 - 228317
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  228244 aaggaaccttaggtactaatgagacctacttaagatattaactgagaactgtgaagtttttatgaaatgctaag 228317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 173395 - 173295
Alignment:
Q  135 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    ||||| ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  173395 aagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaataagttgatg 173298  T
Q  235 atg 237  Q
    |||    
T  173297 atg 173295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 173525 - 173452
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  173525 aaggaactttaggtactaaagagacctattaaagatattaactgagaactttgaagctattatgaaatgctaag 173452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 422572 - 422626
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||||| |||||||||||  ||||||||||  |||||||||||||||    
T  422572 tgttgttgtgatctaattatgctgctgctgttatttaactaagttgcatgagtct 422626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 422404 - 422444
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaact 47  Q
    ||||||||||||| |||||| ||||||||||||| ||||||    
T  422404 ggaactttaggtagtaatgaaacctatttaagatgttaact 422444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 5104 - 5186
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  5104 gaagttgttgaaaatgaattgatattaagttgttgatatgagctgattatgctgctattgttatttaactaagttgcatgagt 5186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 10458 - 10528
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10458 gaactttaagtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatactaag 10528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 69871 - 69804
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  69871 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 69804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 9536 - 9603
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaat 72  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9536 aaggaaccttaggtactaatgagacctatttaagatattaactgagaactgtgaagcttttatgaaat 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 9681 - 9768
Alignment:
Q  148 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||  |||||||||||||||| ||||| ||||||| ||||  | ||||||||||||| |||||| ||||||||    
T  9681 aaatgaattgttattaagct--tgatgtgatctgattacgctgcaattgttaattaactatgttgcatgagtctaaataagttgatgatg 9768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 13365 - 13431
Alignment:
Q  12 tttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  13365 tttaggtactaatgagacctatttaagatattaactgataactgtgtagctattatgaaatgctaag 13431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 13487 - 13557
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaa 204  Q
    ||||||||||||||| ||  |||||||||||| |||||||||||||||||||| ||| |||||||| ||||    
T  13487 caagaagttgttgaagatcgattgatattaagttgttgatgtgatctgattattctgttattgttaattaa 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 58722 - 58804
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  58722 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 58804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 20018 - 20119
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||||||||||||| |||||||||  |||||||||||||||||| ||| ||||||||| ||  ||||||||||| |||||||||| ||||    
T  20018 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatctgattatgttgcaattgttattaaactaagttgcatgaatctgaataagttgat 20115  T
Q  234 gatg 237  Q
    ||||    
T  20116 gatg 20119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 19888 - 19954
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaa 71  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  19888 aaggaactttaggtactaatgagacctattaaagatattaattgagaactgtgaagcttttatgaaa 19954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 6e-24; HSPs: 5)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 71547 - 71475
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  71547 aggaaccttaggtactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag 71475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 414091 - 414145
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||||| ||||    
T  414091 tgttgttgtgatctgattatgctgctgttgttatttaactaagttgcatgcgtct 414145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 71129 - 71072
Alignment:
Q  180 tgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||||| ||||||||||||  ||||||||||||| |||||| | ||||||||    
T  71129 tgattatgctgcaattgttatttaactaagttgcatgagtatgaatatgttgatgatg 71072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 139945 - 139890
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    |||||||||||||| ||| |||||||||||  ||||| | ||||||||||||||||    
T  139945 aaggaactttaggtgctagtgagacctattagagataatgactgagaactgtgaag 139890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 139809 - 139715
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||| ||||| ||| | |||||||  ||||||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||  ||||||||    
T  139809 ttgttgagaatgatttgttgttaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtttatgaataaactgatgatg 139715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 35946 - 36027
Alignment:
Q  137 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    ||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||||||||    
T  35946 gaagttgttgaaatt-aattgatattaagctgttgatatgatctaattatgctgctattgttatttaactaagttgcatgagt 36027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 7176 - 7114
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||| |||||| |||||||| |||||||| |||||||||| ||||||| |||||||    
T  7176 gaactttaggtgctaatgtgacctattaaagatattgactgagaactctgaagcttttatgaa 7114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 7016 - 6948
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||| ||  | ||||||||||  |||||||| ||||||||    
T  7016 ttgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagcatgaataagttgatgatg 6948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 18368 - 18450
Alignment:
Q  141 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 225  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  18368 ttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 18450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18231 - 18304
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||| ||||||||||||||| |||||| | |||||||||||||||||| |||||| ||| ||||    
T  18231 aaggaactttaggtgctaatgagacctattaaagataatgactgagaactgtgaagcttttatgatatgttaag 18304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 3401 - 3474
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||||| ||||    
T  3401 aaggaactttaggtactaatgagacccattaaagatattgactgagaactgtgaagcttttatgaaatgttaag 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 3531 - 3633
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatga 232  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| ||||||| |||| ||||||||||||  |||||||||||||||||| |||| |||    
T  3531 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattatactgcaattgttatttaactaagttgcatgagtctgaattaagttga 3628  T
Q  233 tgatg 237  Q
    |||||    
T  3629 tgatg 3633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 24839 - 24912
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||| ||||    
T  24839 aaggaactttaggtactaatgagacctattaaagatattgactgagaactgtgaagcttttaggaaatgttaag 24912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 24980 - 25072
Alignment:
Q  144 ttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa-taagatgatgatg 237  Q
    |||||||||  ||| |||||||||  ||||||||| |||||||||||| ||||||||| ||   ||||||||||||||||| |||| ||||||||    
T  24980 ttgaaaatgtgttgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactgagttgcatgagtctgaattaagttgatgatg 25072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 235 - 169
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||    
T  235 tgttgatgtgatctgattatgctgctattgttatttaactaagttgcatgagtctatataagatgat 169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 163 - 91
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||||||||||||||||||||| |||| || ||||| |||||||||||||||||| |||||||||| ||||    
T  163 aggaactttaggtactaatgagacttattaaaaatattgactgagaactgtgaagcttttatgaaatgttaag 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 20479 - 20566
Alignment:
Q  148 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  20479 aaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgaatatgaataagttgatgatg 20566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 5702 - 5608
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaag-------ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||||||||||||||||||||| |       |||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  5702 caagatgttgttgaaaatgaattgatattatgaactatgctgttgttgtgatctgattatgctgctactgttatttaactaagttgcatgagtct 5608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 6897 - 6803
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaag-------ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||||||||||||||||||||| |       |||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  6897 caagatgttgttgaaaatgaattgatattatgaactatgctgttgttgtgatctgattatgctgctactgttatttaactaagttgcatgagtct 6803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 6784 - 6684
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||| ||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| | ||    
T  6784 caagatgttgttgaaa-tgaattgttattaagct--tgatgagatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttcat 6688  T
Q  234 gatg 237  Q
    ||||    
T  6687 gatg 6684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 17150 - 17206
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  17150 gctgttgatgtgatctgattatgctgctattgttatttaactaagttccatgagtct 17206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 439 - 372
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||| | |||||||| ||||||||    
T  439 tgatgtgatttgattatgctgcaattgttatttaattaagttgcatgattatgaataagttgatgatg 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 587 - 531
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  587 aggaaccttaggtactaatgaaacctattaaagatattgactgagaactgtgaagct 531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 2981 - 2918
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 230  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||  |||||||    
T  2981 tgttgatgtgatctgattatgctgctattgttatttaactaagttgcataagtctatataagat 2918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 6349 - 6403
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  6349 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 6403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 365 - 299
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||||||||||  ||||||||||    
T  365 tgttgttgtgatctgattatgctgcttttgttatttaactaagttgcatgagtctatataagatgat 299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 520 - 460
Alignment:
Q  10 actttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  520 actttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 42703 - 42649
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  42703 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 42649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 42860 - 42803
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  42860 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 42803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 30988 - 30890
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||| ||||||| |||||||||  ||||| ||| |||||||||||  ||||||||||||  ||||||||||||| |||||||| ||||    
T  30988 caagatgttgttgaaa-tgaattgttattaagct--tgatgagatttgattatgctgtaattgttatttaactaagttgcatgagtatgaataagttgat 30892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 73807 - 73861
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  73807 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 73861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 4513 - 4452
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  4513 attatgctgttgttgtgatctgattatgctgccattgttatttaactaagttgcatgagtct 4452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 4674 - 4603
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||||||||| || |||||||||| |||||  |||||||  ||||||||| ||||||||||||||||||    
T  4674 ggaactttaggtagtagtgagacctatataagaagttaactgtaaactgtgaaactattatgaaatgctaag 4603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 541 - 471
Alignment:
Q  148 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaa-tcaagttgcatgagt 219  Q
    |||||||||| |||||||||  |||| |||  ||||||||||||||||||||||||| | |||||||||||||    
T  541 aaatgaattgttattaagct--tgatatgaattgattatgctgctattgttatttaactaaagttgcatgagt 471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 2125 - 2178
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  2125 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtc 2178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 1962 - 2020
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaa 71  Q
    ||||||| ||||| ||||||||||||||||||||||| |  ||||||||| ||||||||    
T  1962 ttaggtagtaatgtgacctatttaagatattaactgaaatatgtgaagctgttatgaaa 2020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 1569 - 1516
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  1569 gttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 1516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 1731 - 1682
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||| ||||| |||||||||||||| |||||||||| ||||||||||    
T  1731 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagct 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 23451 - 23386
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||| |||| ||||||||||||||||| |||||||| |||||||||| ||||||| |||||||    
T  23451 aaggaaccttagttactaatgagacctattcaagatattgactgagaactatgaagcttttatgaa 23386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 23321 - 23232
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 225  Q
    |||||| ||||||| ||||| ||| |||||||||  ||||||||| |||||| ||||| ||| ||||| ||  | ||| |||||||||||||    
T  23321 caagaaattgttgagaatgatttgttattaagct--tgatgtgatttgattaagctgcaattattattaaactatgtttcatgagtctgaat 23232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 463 - 415
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  463 tgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 631 - 574
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||| ||||| |||||||||||||| |||| ||||| ||||||||||| ||||||    
T  631 ttaggtagtaatgcgacctatttaagatgttaattgagatctgtgaagctactatgaa 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 9406 - 9338
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  9406 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 9338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 10085 - 10149
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| | |||  ||||||||||    
T  10085 ttgatgtgatctgattatgctgctattgttatttaactaagttgcataaatctatataagatgat 10149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 77205 - 77273
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  77205 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 77273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 1362 - 1425
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||||| || ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  1362 ggaactttagttagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 1530 - 1584
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| |||||||||||||||||||| | |||||||||  |||||||||||||||    
T  1530 tgttgttgtgatctgattatgctgctttggttatttaactaagttgcatgagtct 1584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 6035 - 6102
Alignment:
Q  170 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||||| |||||||| ||||||||    
T  6035 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgagtatgaataagttgatgatg 6102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 5871 - 5928
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    |||||||||||||||||||||||||||| | | |||||| |||||||| |||||||||    
T  5871 aaggaactttaggtactaatgagacctaataatgatattgactgagaattgtgaagct 5928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 9591 - 9536
Alignment:
Q  165 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||||||||||||||| || |||||||||||||  ||||||||||||||    
T  9591 gctgttgatgtgatctgattatgttgttattgttatttaactaagttgcatgagtc 9536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 1913 - 1853
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||| ||||||| |||||||||  |||||||| ||||||||||||  ||||||||||||||    
T  1913 attatgctgttgttgtgatctgcctatgctgccattgttatttaactaagttgcatgagtc 1853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 207880 - 207951
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||| |||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  207880 ctgttgatatgatatgattatgctgcaattgttatttaactaagttgcatgaatatgaataagttgatgatg 207951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 6171 - 6105
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||  ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  6171 tgttgttgtgatctgcctatgctgctattgttatttaaccaagttgcatgagtcaatataagatgat 6105  T

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Target: scaffold0546 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 6131 - 6193
Alignment:
Q  8 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||| |||||| |||||||| |||||||| |||||||||| ||||||| |||||||    
T  6131 gaactttaggtgctaatgtgacctattaaagatattgactgagaactctgaagcttttatgaa 6193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 6291 - 6359
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||| ||  | ||||||||||  |||||||| ||||||||    
T  6291 ttgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagcatgaataagttgatgatg 6359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 10138 - 10073
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  10138 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 10073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 10008 - 9907
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||| ||||| ||| |||||| |   ||||||||| |||||||||||| | ||||||||||  |||||||||| || |||||||| ||||    
T  10008 caagaaattgttgagaatgatttgttattaaacc--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtgtatgaataagctgat 9911  T
Q  234 gatg 237  Q
    ||||    
T  9910 gatg 9907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 30783 - 30836
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  30783 tgttgttgtgatccgattatgctgcttttgttatttaaccaagttgcatgagtc 30836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 1948 - 1880
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||| ||||||  ||||||||||| | |||||||| ||||||||    
T  1948 ttgatgtgatttgattatgctgcaattgtgatttaactaagttgcatgattatgaataagttgatgatg 1880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 15409 - 15341
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||| | | |||||||| ||||||||    
T  15409 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcataattatgaataagttgatgatg 15341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 36540 - 36476
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    |||||||||||||| ||| |||||||||||  ||||| | |||||||||||||||||| ||||||    
T  36540 aaggaactttaggtgctagtgagacctattagagataatgactgagaactgtgaagcttttatga 36476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 36396 - 36310
Alignment:
Q  149 aatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||| ||||||||||  | |||||||  ||||||||    
T  36396 aatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaattaagttgcatgtttatgaataaactgatgatg 36310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 8571 - 8503
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||| ||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  8571 ttgatgtgatttgattatgttgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 8503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 15715 - 15647
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatgatg 237  Q
    |||||||||| |||||||| ||| ||||||||||||  ||||||||||| | |||||||| ||||||||    
T  15715 ttgatgtgatttgattatgttgcaattgttatttaactaagttgcatgattatgaataagttgatgatg 15647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 15290 - 15361
Alignment:
Q  6 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    |||||| || |||||||||||||| |||| || || |||||||||||||||||||||||| ||||||| ||||    
T  15290 aggaacctttggtactaatgagacatattaaa-atgttaactgagaactgtgaagctattgtgaaatgataag 15361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 44164 - 44104
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||| ||||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  44164 attatgctgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 44104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 44318 - 44269
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 62  Q
    ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  44318 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 44269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 9655 - 9600
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| |||||||||||    
T  9655 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaag 9600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 4097 - 4160
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||  |||||| || |||||||    
T  4097 ggaactttaggtagtaatgtgacctatttaagatgttaactgagatatgtgaatctgttatgaa 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 20057 - 19990
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||| |||||  |||||| ||||||||||||||||||| |||||||||| | ||||||||||    
T  20057 ctgttgttgtaatctgcctatgctactattgttatttaatcaagctgcatgagtcggtataagatgat 19990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 18695 - 18750
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||||| |||||||||  |||||||||||||||||||||  |||||||||||||||    
T  18695 ctgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtct 18750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 18534 - 18594
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatg 73  Q
    ||||||| ||||||||||||| |||||  |||||||  | |||||||||| ||||||||||    
T  18534 ttaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgaaatg 18594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 7547 - 7493
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  7547 tgttgctgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 7493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 15157 - 15111
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 219  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||    
T  15157 tgtgatctgattatgctgttattgttatttaactaagttgcatgagt 15111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 21844 - 21910
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  21844 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 21910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 29736 - 29802
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  29736 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 29802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 21684 - 21740
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    ||||||| ||||||||||||| |||||| |||||||  | |||||||||| ||||||    
T  21684 ttaggtagtaatgagacctatataagatgttaactgcaatctgtgaagctgttatga 21740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 29576 - 29632
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    ||||||| ||||||||||||| |||||| |||||||  | |||||||||| ||||||    
T  29576 ttaggtagtaatgagacctatataagatgttaactgcaatctgtgaagctgttatga 29632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 4841 - 4911
Alignment:
Q  163 aagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||| |||||||||  |||||||||||| ||||||||  ||||||||||||||   ||||||||||    
T  4841 aagctgttgttgtgatctgcctatgctgctattattatttaactaagttgcatgagtcaatataagatgat 4911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 14740 - 14674
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||  ||||||||||||||||||||| ||||||| |||||||   ||||||||||    
T  14740 tgttgttgtgatctgcctatgctgctattgttatttaaccaagttgtatgagtcaatataagatgat 14674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 23755 - 23689
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||  ||||||||||||||||||||| ||||||| |||||||   ||||||||||    
T  23755 tgttgttgtgatctgcctatgctgctattgttatttaaccaagttgtatgagtcaatataagatgat 23689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 39179 - 39113
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||  ||||||||||||||||||||| ||||||| |||||||   ||||||||||    
T  39179 tgttgttgtgatctgcctatgctgctattgttatttaaccaagttgtatgagtcaatataagatgat 39113  T

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Target: scaffold0056 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 14127 - 14193
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||  ||||||||||    
T  14127 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtctatataagatgat 14193  T

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Target: scaffold0037 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 80810 - 80876
Alignment:
Q  169 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 235  Q
    |||||||||| | |||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  80810 ttgatgtgatttaattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 80876  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 38520 - 38586
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| |||||||||  |||||||||||||||||||||  ||||||||||||||   ||||||||||    
T  38520 tgttgttgtgatctgtctatgctgctattgttatttaactaagttgcatgagtcaatataagatgat 38586  T

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Target: scaffold0297 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 15737 - 15786
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  15737 tatgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 15786  T

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Target: scaffold0297; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 10580 - 10629
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||| |||||||||||||||| |||||||||||||||   ||||||||||    
T  10580 tatgttgctattgttatttaaccaagttgcatgagtcgatataagatgat 10629  T

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Target: scaffold0284 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 18589 - 18524
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||| ||||| | |||||||    
T  18589 aaggaactttaggtactaatgtgacctattaaagataatgactgtgaactatgaagtttttatgaa 18524  T

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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 35552 - 35605
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  35552 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 35605  T

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Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 64088 - 64023
Alignment:
Q  5 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    ||||||||||||||||||||| |||||||| |||||| | |||  ||||||||||| | |||||||    
T  64088 aaggaactttaggtactaatgtgacctattaaagataatgactatgaactgtgaagtttttatgaa 64023  T

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Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 34960 - 35014
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||    
T  34960 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtct 35014  T

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Target: scaffold0042; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 63958 - 63858
Alignment:
Q  134 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    |||||| ||||||| ||||||||| |||||| |   || |||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||    
T  63958 caagaaattgttgagaatgaattgttattaaacc--tgttgtgatttgattatgctgcaaatgttatttaactaagttgcatg-ttatgaataagctgat 63862  T
Q  234 gatg 237  Q
    ||||    
T  63861 gatg 63858  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 19773 - 19826
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||| ||||||||| |||||||||||  ||||||||||||||    
T  19773 tgttgttgtgatctgaatatgctgcttttgttatttaactaagttgcatgagtc 19826  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 15251 - 15304
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||||||| |||| |||| |||||||||||  ||||||||||||||    
T  15251 tgttgttgtgatctgaatatgatgcttttgttatttaactaagttgcatgagtc 15304  T

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Target: scaffold0367 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 980 - 920
Alignment:
Q  160 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||| ||||||| |||||||||  |||||||||||||||||| ||  ||||||||||||||    
T  980 attatgctgttgttgtgatctgcctatgctgctattgttattgaactaagttgcatgagtc 920  T

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Target: scaffold0637 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 8630 - 8583
Alignment:
Q  173 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  8630 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 8583  T

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Target: scaffold0637; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 8799 - 8752
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 60  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  8799 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 8752  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 192189 - 192252
Alignment:
Q  7 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 70  Q
    |||||||  |||| ||||| |||||||||||||| |||||||||| |||||||| | |||||||    
T  192189 ggaacttagggtagtaatgtgacctatttaagatgttaactgagatctgtgaagttgttatgaa 192252  T

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Target: scaffold0439 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 2477 - 2531
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||  ||||||||||  || ||||||||||||    
T  2477 tgttgttgtgatctgattatgctgctgctgttatttaactaaattgcatgagtct 2531  T

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Target: scaffold0439; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 10337 - 10391
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    ||||| ||||||||||||||||||||  ||||||||||  || ||||||||||||    
T  10337 tgttgttgtgatctgattatgctgctgctgttatttaactaaattgcatgagtct 10391  T

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Target: scaffold0215 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 26904 - 26838
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||   ||||||||||    
T  26904 tgttgttgtaatctgcctatgctgctattgttatttaaccaagatgcatgagtcgatataagatgat 26838  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 48500 - 48550
Alignment:
Q  166 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatg 216  Q
    |||||| |||||||||  ||||||||||||||||||||| | |||||||||    
T  48500 ctgttgttgtgatctgtctatgctgctattgttatttaacctagttgcatg 48550  T

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Target: scaffold0101 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 9004 - 9070
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 233  Q
    ||||| ||| |||||  |||||||||||| |||||||| |||||||||||||||   ||||||||||    
T  9004 tgttgttgtaatctgcctatgctgctattattatttaaccaagttgcatgagtcgatataagatgat 9070  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 16696 - 16762
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 234  Q
    |||||| |||| |||||||||||| ||||||||||||  |||| |||||| | |||||||| |||||    
T  16696 gttgatatgatttgattatgctgcaattgttatttaactaagtcgcatgattatgaataagttgatg 16762  T

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Target: scaffold0574 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 7878 - 7911
Alignment:
Q  187 gctgctattgttatttaatcaagttgcatgagtc 220  Q
    |||||||||||||||||| |||||||||||||||    
T  7878 gctgctattgttatttaaccaagttgcatgagtc 7911  T

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Target: scaffold0342 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 7311 - 7364
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| ||||||||||||||| ||||  ||||||||||  ||||||||||||||    
T  7311 tgttgttgtgatctgattatgttgctgctgttatttaactaagttgcatgagtc 7364  T

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Target: scaffold0158 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 2907 - 2854
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||| ||||||||| || |||||||||||||||||||  | |||||||||||||    
T  2907 gttgttgtgatctgcttgtgctgctattgttatttaactatgttgcatgagtct 2854  T

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Target: scaffold0158; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 6573 - 6520
Alignment:
Q  168 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 221  Q
    |||| ||||||||| || |||||||||||||||||||  | |||||||||||||    
T  6573 gttgttgtgatctgcttgtgctgctattgttatttaactatgttgcatgagtct 6520  T

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Target: scaffold0096 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 16389 - 16442
Alignment:
Q  167 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||| |||||| ||  |||||||||||||||||||||  ||||||||||||||    
T  16389 tgttgttgtgatatgcctatgctgctattgttatttaactaagttgcatgagtc 16442  T

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Target: scaffold0035 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 46605 - 46670
Alignment:
Q  13 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 78  Q
    ||||||| ||||| ||||||| |||||  |||||||  | |||||||||| |||||||||||||||    
T  46605 ttaggtagtaatgtgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgctaag 46670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 175005 - 174952
Alignment:
Q  16 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 69  Q
    |||| ||||||||||||| |||||  |||||||| | |||||||||||||||||    
T  175005 ggtagtaatgagacctatataagaagttaactgaaatctgtgaagctattatga 174952  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 178957 - 178921
Alignment:
Q  184 tatgctgctattgttatttaatcaagttgcatgagtc 220  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  178957 tatgctgctattgttatttaaccaagctgcatgagtc 178921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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