View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7953_high_3 (Length: 311)
Name: NF7953_high_3
Description: NF7953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7953_high_3 |
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Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 22 - 303
Target Start/End: Original strand, 41170524 - 41170805
Alignment:
| Q |
22 |
tttatttgaaattttaatacattagtggtactttaggacaaggagctagctgcaaaagctcgtgaagggaaattgaagccgcaagaatttcaagggggga |
121 |
Q |
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| T |
41170524 |
tttatttgaaattttaatacattagtggtactttaggtcaaggagctagctgcaaaagctcgtgaagggaaattgaagccgcaagaatttcaagggggga |
41170623 |
T |
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| Q |
122 |
cttttaggtgagtttactactgaatgcatatattgccatgaatgtcgggaaattctctatttatcatttttgtttgccaaaaccaataactccgggcttt |
221 |
Q |
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| T |
41170624 |
cttttaggtgagtttactactgaatgcatatattgccatgaatgttgggaaattctctatttatcatttttgtttgccaaaaccaataactccgggcttt |
41170723 |
T |
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| Q |
222 |
gtacaaccccttgcagcatttcaaacttaggaatgtatcccgtggataaattctgtgctattataaatcccccacaggttct |
303 |
Q |
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| T |
41170724 |
gtacaaccccttgcagcatttcaaacttaggaatgtatcctgtggataaattctgtgctattataaatcccccacaggttct |
41170805 |
T |
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