View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7956_low_26 (Length: 215)

Name: NF7956_low_26
Description: NF7956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7956_low_26
NF7956_low_26
[»] chr3 (30 HSPs)
chr3 (17-153)||(44799045-44799181)
chr3 (104-150)||(986946-986992)
chr3 (77-153)||(25340914-25340990)
chr3 (82-153)||(48209201-48209272)
chr3 (75-153)||(916433-916510)
chr3 (75-153)||(44075146-44075223)
chr3 (75-153)||(45334182-45334260)
chr3 (104-153)||(7757105-7757154)
chr3 (76-153)||(334837-334915)
chr3 (76-150)||(16980347-16980421)
chr3 (79-153)||(27185474-27185548)
chr3 (76-150)||(48315017-48315091)
chr3 (76-153)||(51047159-51047237)
chr3 (97-150)||(1111834-1111887)
chr3 (76-153)||(3100215-3100292)
chr3 (76-153)||(7464481-7464558)
chr3 (76-153)||(22722396-22722473)
chr3 (112-153)||(29164743-29164784)
chr3 (76-153)||(29687076-29687153)
chr3 (76-153)||(32843252-32843329)
chr3 (76-153)||(35863803-35863880)
chr3 (76-153)||(43344997-43345074)
chr3 (76-145)||(44579630-44579699)
chr3 (76-145)||(52904141-52904210)
chr3 (113-153)||(552205-552245)
chr3 (113-153)||(8136622-8136662)
chr3 (104-144)||(27065731-27065771)
chr3 (76-144)||(33745093-33745161)
chr3 (104-152)||(34899119-34899167)
chr3 (113-153)||(40520783-40520823)
[»] chr6 (22 HSPs)
chr6 (76-153)||(26489938-26490015)
chr6 (75-153)||(247653-247730)
chr6 (75-145)||(33976238-33976307)
chr6 (76-153)||(9444951-9445028)
chr6 (76-153)||(14296947-14297024)
chr6 (79-152)||(32524411-32524484)
chr6 (82-153)||(24623307-24623378)
chr6 (76-153)||(788860-788937)
chr6 (76-153)||(7081644-7081721)
chr6 (76-153)||(8569703-8569780)
chr6 (76-153)||(9665304-9665381)
chr6 (76-149)||(12333562-12333635)
chr6 (79-152)||(12602022-12602094)
chr6 (104-153)||(17935751-17935800)
chr6 (77-150)||(20744133-20744206)
chr6 (76-153)||(27907941-27908018)
chr6 (80-153)||(29680586-29680659)
chr6 (76-153)||(29740476-29740553)
chr6 (77-145)||(15046914-15046982)
chr6 (76-140)||(18256877-18256940)
chr6 (105-153)||(29283838-29283886)
chr6 (88-152)||(33824887-33824951)
[»] chr4 (38 HSPs)
chr4 (75-153)||(19588147-19588225)
chr4 (76-153)||(9946421-9946498)
chr4 (77-153)||(43499586-43499662)
chr4 (75-153)||(24079830-24079907)
chr4 (76-150)||(35021460-35021534)
chr4 (76-145)||(14577505-14577574)
chr4 (76-153)||(16470298-16470375)
chr4 (76-153)||(56564973-56565050)
chr4 (76-143)||(39171370-39171437)
chr4 (75-150)||(43374265-43374340)
chr4 (75-153)||(10261759-10261836)
chr4 (75-153)||(21562619-21562696)
chr4 (75-153)||(26926700-26926777)
chr4 (75-153)||(32180823-32180901)
chr4 (75-153)||(43330140-43330217)
chr4 (76-153)||(7230274-7230351)
chr4 (76-153)||(11949753-11949830)
chr4 (92-153)||(34969383-34969444)
chr4 (82-151)||(42139844-42139913)
chr4 (76-153)||(49491182-49491259)
chr4 (76-152)||(22164260-22164336)
chr4 (76-152)||(49021760-49021836)
chr4 (78-153)||(49041971-49042046)
chr4 (79-153)||(2430994-2431068)
chr4 (79-153)||(8027387-8027461)
chr4 (75-153)||(35287497-35287575)
chr4 (87-153)||(39093565-39093631)
chr4 (76-142)||(50362140-50362206)
chr4 (75-153)||(51450206-51450283)
chr4 (76-153)||(4963343-4963419)
chr4 (80-153)||(5924647-5924720)
chr4 (76-153)||(12671738-12671815)
chr4 (104-153)||(21318243-21318292)
chr4 (76-153)||(23809943-23810020)
chr4 (76-153)||(24664981-24665058)
chr4 (97-145)||(7371546-7371594)
chr4 (76-152)||(19479468-19479544)
chr4 (113-153)||(54857605-54857645)
[»] chr1 (37 HSPs)
chr1 (75-153)||(8269358-8269436)
chr1 (113-153)||(32962594-32962634)
chr1 (82-153)||(40411743-40411814)
chr1 (88-147)||(40680490-40680549)
chr1 (75-153)||(26010215-26010293)
chr1 (76-142)||(52592428-52592494)
chr1 (76-153)||(17139507-17139584)
chr1 (76-149)||(29506821-29506894)
chr1 (76-153)||(52043267-52043344)
chr1 (81-125)||(30937474-30937518)
chr1 (82-153)||(17917128-17917199)
chr1 (75-150)||(18166595-18166670)
chr1 (74-153)||(29233964-29234043)
chr1 (75-142)||(29739330-29739397)
chr1 (104-150)||(2994780-2994826)
chr1 (76-150)||(9527991-9528065)
chr1 (79-153)||(11181925-11181999)
chr1 (103-149)||(18335813-18335859)
chr1 (83-153)||(23405348-23405418)
chr1 (75-153)||(27533236-27533314)
chr1 (76-150)||(41763148-41763222)
chr1 (76-141)||(1789565-1789630)
chr1 (76-145)||(5907793-5907862)
chr1 (76-153)||(7158767-7158844)
chr1 (104-153)||(8736457-8736506)
chr1 (79-152)||(16475904-16475977)
chr1 (76-153)||(32944730-32944807)
chr1 (80-153)||(39252247-39252320)
chr1 (76-153)||(39302939-39303016)
chr1 (76-153)||(44243867-44243944)
chr1 (76-153)||(44641521-44641598)
chr1 (76-153)||(44801505-44801582)
chr1 (76-125)||(49183167-49183216)
chr1 (76-144)||(19262906-19262974)
chr1 (76-140)||(19620570-19620634)
chr1 (76-144)||(26803450-26803518)
chr1 (77-153)||(28016180-28016256)
[»] chr7 (36 HSPs)
chr7 (76-153)||(40024294-40024371)
chr7 (76-153)||(8227343-8227420)
chr7 (76-153)||(19416508-19416585)
chr7 (76-149)||(23198743-23198816)
chr7 (75-153)||(6579611-6579689)
chr7 (75-153)||(20763148-20763225)
chr7 (75-153)||(29488714-29488791)
chr7 (75-153)||(33232387-33232464)
chr7 (75-153)||(34284529-34284606)
chr7 (97-153)||(18773746-18773802)
chr7 (76-151)||(19599139-19599214)
chr7 (81-152)||(41029271-41029342)
chr7 (82-153)||(47607900-47607971)
chr7 (76-145)||(20135159-20135229)
chr7 (80-150)||(30622970-30623040)
chr7 (83-153)||(41250037-41250107)
chr7 (75-153)||(45046205-45046283)
chr7 (76-153)||(6023303-6023380)
chr7 (104-145)||(6781829-6781870)
chr7 (76-153)||(16577850-16577927)
chr7 (76-153)||(16587735-16587812)
chr7 (104-153)||(18023701-18023750)
chr7 (75-152)||(19036093-19036169)
chr7 (75-152)||(20718467-20718543)
chr7 (76-153)||(27462426-27462503)
chr7 (76-153)||(27833391-27833468)
chr7 (76-153)||(30857242-30857319)
chr7 (76-153)||(35142139-35142216)
chr7 (76-149)||(47677571-47677644)
chr7 (97-153)||(7720192-7720248)
chr7 (104-152)||(7735552-7735600)
chr7 (113-153)||(10242511-10242551)
chr7 (97-153)||(21728759-21728815)
chr7 (97-153)||(32315238-32315294)
chr7 (76-152)||(40752830-40752906)
chr7 (76-152)||(42336064-42336140)
[»] scaffold0007 (1 HSPs)
scaffold0007 (83-153)||(221003-221073)
[»] chr5 (25 HSPs)
chr5 (75-153)||(15889404-15889482)
chr5 (104-150)||(40837896-40837942)
chr5 (76-153)||(40715939-40716016)
chr5 (75-153)||(37462105-37462182)
chr5 (76-153)||(16575312-16575389)
chr5 (76-153)||(41266380-41266457)
chr5 (77-153)||(16701571-16701647)
chr5 (76-152)||(32200438-32200514)
chr5 (106-153)||(13864368-13864415)
chr5 (77-140)||(17861974-17862037)
chr5 (106-153)||(37884687-37884734)
chr5 (78-153)||(39980504-39980579)
chr5 (76-150)||(34191427-34191501)
chr5 (76-142)||(35270682-35270748)
chr5 (76-153)||(3445237-3445314)
chr5 (76-153)||(6489001-6489078)
chr5 (76-153)||(18331701-18331778)
chr5 (76-153)||(22522791-22522868)
chr5 (76-153)||(34436845-34436922)
chr5 (97-153)||(781878-781934)
chr5 (97-145)||(3671233-3671281)
chr5 (76-152)||(11637563-11637639)
chr5 (113-153)||(14474865-14474905)
chr5 (104-152)||(20721072-20721120)
chr5 (101-153)||(27086097-27086149)
[»] scaffold0005 (1 HSPs)
scaffold0005 (76-145)||(239801-239870)
[»] chr2 (35 HSPs)
chr2 (76-153)||(6723067-6723144)
chr2 (76-153)||(21482509-21482586)
chr2 (76-145)||(41187455-41187524)
chr2 (75-153)||(3708687-3708764)
chr2 (75-153)||(11868652-11868729)
chr2 (79-153)||(20990894-20990968)
chr2 (75-149)||(29734684-29734758)
chr2 (75-153)||(35360045-35360122)
chr2 (76-125)||(15251857-15251906)
chr2 (80-153)||(25186232-25186305)
chr2 (76-149)||(27244651-27244724)
chr2 (104-153)||(44746569-44746618)
chr2 (104-152)||(660813-660861)
chr2 (113-153)||(8728850-8728890)
chr2 (76-140)||(15427686-15427750)
chr2 (113-153)||(23250310-23250350)
chr2 (77-152)||(3617087-3617162)
chr2 (87-153)||(4137996-4138062)
chr2 (79-153)||(17142827-17142901)
chr2 (79-153)||(20565065-20565139)
chr2 (79-153)||(31815877-31815951)
chr2 (113-150)||(4180728-4180765)
chr2 (76-153)||(10735821-10735898)
chr2 (76-125)||(28277694-28277743)
chr2 (76-153)||(29133474-29133551)
chr2 (76-153)||(29544621-29544698)
chr2 (76-153)||(34469862-34469939)
chr2 (76-129)||(38202847-38202900)
chr2 (97-149)||(3113721-3113773)
chr2 (76-152)||(3197071-3197146)
chr2 (90-150)||(18693655-18693715)
chr2 (113-153)||(20200736-20200776)
chr2 (101-153)||(28120644-28120696)
chr2 (113-153)||(36264469-36264509)
chr2 (77-153)||(36648780-36648856)
[»] chr8 (29 HSPs)
chr8 (113-153)||(8999881-8999921)
chr8 (77-152)||(29652213-29652288)
chr8 (80-151)||(36781406-36781477)
chr8 (75-153)||(19163526-19163604)
chr8 (75-153)||(20665353-20665430)
chr8 (75-153)||(30550716-30550793)
chr8 (79-145)||(33482147-33482213)
chr8 (104-150)||(34438426-34438472)
chr8 (75-153)||(44215465-44215542)
chr8 (104-153)||(12800890-12800939)
chr8 (76-149)||(14303159-14303232)
chr8 (76-153)||(19260569-19260646)
chr8 (76-153)||(27587215-27587292)
chr8 (76-153)||(29499765-29499842)
chr8 (76-145)||(32555248-32555317)
chr8 (76-152)||(27718885-27718961)
chr8 (78-153)||(8881271-8881346)
chr8 (76-130)||(6314336-6314390)
chr8 (75-149)||(8137928-8138002)
chr8 (103-153)||(24838160-24838210)
chr8 (107-153)||(40679719-40679765)
chr8 (104-153)||(12061609-12061658)
chr8 (113-150)||(24023408-24023445)
chr8 (80-153)||(27134410-27134483)
chr8 (79-152)||(37749990-37750063)
chr8 (76-149)||(37938489-37938562)
chr8 (76-153)||(39433404-39433481)
chr8 (76-152)||(11708980-11709056)
chr8 (113-153)||(15001265-15001305)
[»] scaffold0143 (1 HSPs)
scaffold0143 (79-145)||(4463-4529)
[»] scaffold0071 (1 HSPs)
scaffold0071 (104-153)||(53447-53496)
[»] scaffold0262 (1 HSPs)
scaffold0262 (76-153)||(15920-15997)
[»] scaffold0160 (1 HSPs)
scaffold0160 (76-145)||(22905-22974)
[»] scaffold0050 (1 HSPs)
scaffold0050 (104-153)||(53370-53419)
[»] scaffold0021 (1 HSPs)
scaffold0021 (104-153)||(161163-161212)
[»] scaffold0011 (1 HSPs)
scaffold0011 (76-145)||(185257-185326)


Alignment Details
Target: chr3 (Bit Score: 117; Significance: 9e-60; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 44799181 - 44799045
Alignment:
Q  17 accaaaacgactattatccctttaaaatattaaccaaatgcagttaataaaaacttggcgtcctcgtgagtttagcttatttgataaggacaatatataa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||    
T  44799181 accaaaacgactattatccctttaaaatattaaccaaatgcagttaataaaaacttggcgtcctcgtgagcttaacttatttgataagaacaatacataa 44799082  T
Q  117 aatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||||||||||||||| ||||||    
T  44799081 aatatgcaaagtccagggttcaaaccccgatcaccac 44799045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 986992 - 986946
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  986992 ggacaatgtataaaatatgcaaggtccagggttcaaaccccgaccac 986946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 25340990 - 25340914
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||| |||||| | ||| || |||||||  ||||||||||||| |||| |||||||||||||| |||||||    
T  25340990 tcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 25340914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 48209272 - 48209201
Alignment:
Q  82 gtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| | |||||| |||||||| |||| ||||  || || ||||||||||||||||||||||||    
T  48209272 gtgagtttagctcagttgatagggacaatacataatatatataaggttcagggttcaaaccccgaccaccac 48209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 916433 - 916510
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  916433 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 916510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 44075223 - 44075146
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||||||||||| ||  || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  44075223 cgtcctcgtgagtttagcttagtttgta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 44075146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 45334182 - 45334260
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||| ||| ||| |||||||| |||||  |||| |||||||| || | ||||||||| ||||||||||||    
T  45334182 cgtcctcgtgagtgtagtttaattgataagaacaatgcataatatatgcaaggttcggggttcaaatcccgaccaccac 45334260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 7757105 - 7757154
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||||||| || ||| |||| |||||||||||||||    
T  7757105 ggacaatatataaaatatgcaaggttcagagttcgaaccccgaccaccac 7757154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 334915 - 334837
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaa-tatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||||| || | ||| || |||||| |  ||||||||||||| |||| |||||||||||||| |||||||    
T  334915 gtcctcgtgagtttaactcagttggtatggacaaatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 334837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 16980421 - 16980347
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||||||| |||||| | ||| ||||||||||  |||| |||||||| || || |||||||| |||||||||    
T  16980421 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcatggttcaaatcccgaccac 16980347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 27185474 - 27185548
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| |||||| | ||| || |||||||| |||| |||||||| |||  ||||||||||| ||||||||||    
T  27185474 ctcgtgagcttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacctcgaccaccac 27185548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 48315091 - 48315017
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||||||| |||||| | ||| |||||| |||  |||| |||||||| |||| ||||||||| |||||||||    
T  48315091 gtcctcgtgagcttagctcagttggtaaggataatgcataatatatgcaaggtccggggttcaaatcccgaccac 48315017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 51047237 - 51047159
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataa-aatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||| ||| |||| ||| || ||||||| ||||| |||||| || |||| ||||||||||||||||||||||    
T  51047237 gtccccgtgagcttaccttagttggtatggacaatgtataataatatgtaaggtccggggttcaaaccccgaccaccac 51047159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 1111887 - 1111834
Alignment:
Q  97 ttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    |||||| |||||||| |||| |||||||| |||  |||||||||||||||||||    
T  1111887 ttgatagggacaatacataatatatgcaaggtctggggttcaaaccccgaccac 1111834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 3100215 - 3100292
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| |  |||||||  |||| |||||||||||||||||||  ||||||| |||||||    
T  3100215 gtcctcgtgagcttagctcagttggtgtggacaatgcataacatatgcaaagtccagggtttgaaccccggccaccac 3100292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 7464558 - 7464481
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| ||| || | ||| || |||||||  |||| ||||| || |||| ||||||||||||||||||||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 7464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 22722396 - 22722473
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||  || | |||||  ||||||||||||| ||||  |||||||||||||||||||||    
T  22722396 gtcctcgtgagcttagctcagttagtatgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgaccaccac 22722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 29164784 - 29164743
Alignment:
Q  112 tataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||| ||||||||||||  ||||||||||||||||||||||    
T  29164784 tataatatatgcaaagtctggggttcaaaccccgaccaccac 29164743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 29687076 - 29687153
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | |||||| ||||||||||||  |||||||| ||  | |||||||| ||||| ||||||    
T  29687076 gtcctcgtgagcttagctcagttgatatggacaatatatattatatgcaaggtttaaggttcaaatcccgatcaccac 29687153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 32843329 - 32843252
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| |  |||||||  ||||||||||||| |||  |||||||||||||| |||||||    
T  32843329 gtcctcgtgagcttagctcagttggtttggacaatgcataaaatatgcaaggtctggggttcaaaccccggccaccac 32843252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 35863880 - 35863803
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| || |||||| | ||| ||||||||||| |||| |||||||| |||  ||||||||||| || |||||||    
T  35863880 gtcctcgtaagcttagctcagttggtaaggacaatacataatatatgcaaggtctggggttcaaacctcggccaccac 35863803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 43345074 - 43344997
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||| | ||| || | |||||| |||| |||||||| |||||| ||||| | |||||| |||||    
T  43345074 gtcctcgtgagtttagctcagttggtatgaacaatacataatatatgcaaggtccagagttcagatcccgacaaccac 43344997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 44579630 - 44579699
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||| |||||| | ||| || |||||||  ||||||||||||| |||| |||||| |||||||    
T  44579630 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaaccccg 44579699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 52904210 - 52904141
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||| |||||| | ||| ||||||||||  |||| |||||||| |||  ||||||||||||||    
T  52904210 gtcctcgtgaggttagctcagttggtaaggacaatgcataatatatgcaatgtcgggggttcaaaccccg 52904141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 552205 - 552245
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||||| |||||||||||||||||||||| ||||    
T  552205 ataatatatgcaaggtccagggttcaaaccccgacctccac 552245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 8136662 - 8136622
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||||| ||||| |||||||||||||||||||||    
T  8136662 ataatatatgcaaggtccaaggttcaaaccccgaccaccac 8136622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 27065771 - 27065731
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaacccc 144  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  27065771 ggacaatgcataaaatatgcaaggtccagggttcaaacccc 27065731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 33745093 - 33745161
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaacccc 144  Q
    |||| |||||| |||||| | |||||| |||||||  ||||||||||||| |||  |||||||||||||    
T  33745093 gtccccgtgagcttagctcaattgatatggacaatgcataaaatatgcaaggtctggggttcaaacccc 33745161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 34899119 - 34899167
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||  |||| |||||||| |||| |||||||||||||||||||||    
T  34899119 ggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 40520783 - 40520823
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||| |||||  ||||||||||||||||||||    
T  40520783 ataaaatatgcaaggtccaaagttcaaaccccgaccaccac 40520823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 26490015 - 26489938
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| ||||||  ||||| | |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  26490015 gtccccgtgagcgtagctcagttgatagggacaatgtataaaatatgcaaagtccagggttcaaaccccaaccaccac 26489938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 247653 - 247730
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  247653 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 247730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 33976238 - 33976307
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| ||||||||||||||    
T  33976238 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggggttcaaaccccg 33976307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 9444951 - 9445028
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || | ||||| |||||||||||||| || |||||||| || ||||||||||||    
T  9444951 gtcctcgtgagcttagctcagttggtatgaacaatgtataaaatatgcaaggttcagggttcgaatcccgaccaccac 9445028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 14297024 - 14296947
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||| ||||| |||||| | ||| || |||||||| |||||||||| || |||| |||||||||||||| |||||||    
T  14297024 gtccttgtgagcttagctgagttggtatggacaatacataaaatatgtaaggtccggggttcaaaccccggccaccac 14296947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 32524484 - 32524411
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||| ||| || | ||| || |||||||  |||| ||||||||||||||||||||||||||| |||||||    
T  32524484 ctcgtgagcttaactcaattggtagggacaatgcataatatatgcaaagtccagggttcaaaccccaaccacca 32524411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 24623378 - 24623307
Alignment:
Q  82 gtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| | |||||| |||||||  |||| ||||| || || | ||||||||||||||||||||||    
T  24623378 gtgagtttagctcagttgatatggacaatgcataatatatgtaaggttcggggttcaaaccccgaccaccac 24623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 788860 - 788937
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| ||| || | ||| ||||||||||  |||| |||||||| || | | ||||||||||||||||||||    
T  788860 gtcctcgtgagcttatctcagttggtaaggacaatgcataatatatgcaaggttcggagttcaaaccccgaccaccac 788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 7081721 - 7081644
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||||||| ||||||| |||| |||||||| ||| | |||| ||||||  ||||||||    
T  7081721 gtcctcgtgagcttagctcagttgataaagacaatacataatatatgcaaggtctaaggttgaaacccaaaccaccac 7081644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 8569703 - 8569780
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||||||| || | ||| || |||||||  |||| |||||||| |||| |||||||||||||| |||||||    
T  8569703 gtccccgtgagtttaactcaattggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 8569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 9665304 - 9665381
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||||| || | ||| || | ||||||||||| ||||| || |||| |||||| ||| |||||||||||    
T  9665304 gtcctcgtgagtttaactcaattggtatgaacaatatataatatatgtaaggtccggggttcgaactccgaccaccac 9665381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 12333635 - 12333562
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    ||||||||||| |||||| | ||  || |||||||  ||||||||||||| |||||| ||| ||||||||||||    
T  12333635 gtcctcgtgagcttagctcagttagtatggacaatgcataaaatatgcaaggtccagagtttaaaccccgacca 12333562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 12602022 - 12602094
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||||||||||||||| ||| || |||||||| |||| |||||||| || | |||||||||  ||||||||||    
T  12602022 ctcgtgagtttagcttagttggtagggacaatacataatatatgcaaggt-ctgggttcaaaatccgaccacca 12602094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 17935751 - 17935800
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||  ||||||||||||| ||| |||||||||| ||||||||||||    
T  17935751 ggacaatgcataaaatatgcaaggtctagggttcaaatcccgaccaccac 17935800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 20744133 - 20744206
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    |||||||||| |||||| | ||| || |||||||  |||| |||||||| |||  |||||||||||||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccccgaccac 20744206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 27908018 - 27907941
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| || |||||| | |||| ||||| |||  ||||||||||||| |||  |||||||||||||| |||||||    
T  27908018 gtcctcgttagcttagctcagttgacaaggataatgcataaaatatgcaaggtctggggttcaaaccccggccaccac 27907941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 29680586 - 29680659
Alignment:
Q  80 tcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||||||||||||||| ||| |||  |||| |||||||| || | | |||||||| |||||||||||    
T  29680586 tcgtaagtttagcttatttgatagggataatgcataatatatgcaaggttcggtgttcaaactccgaccaccac 29680659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 29740476 - 29740553
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || |||||||  |||| ||| |||| |||| |||||||||||||| |||||||    
T  29740476 gtcctcgtgagcttagctcaattggtatggacaatgcataatatacgcaaggtccggggttcaaaccccggccaccac 29740553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 15046982 - 15046914
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||||||||||| ||||||  ||||||  |||| |||||||  |||  ||||||||||||||    
T  15046982 tcctcgtgagtttagcttaattgatatagacaatgcataatatatgcattgtctggggttcaaaccccg 15046914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 18256877 - 18256940
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaa 140  Q
    ||||||||||| |||||| | ||||||||||||||  |||| |||||||| |||| |||||||||    
T  18256877 gtcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaaggtcc-gggttcaaa 18256940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 29283838 - 29283886
Alignment:
Q  105 gacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| ||||| |||||||| ||| ||||||||||| |||||||||||    
T  29283838 gacaatgtataatatatgcaaggtctagggttcaaactccgaccaccac 29283886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 33824887 - 33824951
Alignment:
Q  88 ttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||| | ||||||||||||||  |||| |||||||| |||| ||||||||||| || ||||||    
T  33824887 ttagctcagttgataaggacaatgcataatatatgcaaggtccggggttcaaacctcggccacca 33824951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 19588147 - 19588225
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||| | ||| || |||||||  ||||||||||||| ||||||||||||||||||| |||||||    
T  19588147 cgtcctcgtgagcttagctcaattggtatggacaatgcataaaatatgcaaggtccagggttcaaaccccggccaccac 19588225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 9946421 - 9946498
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || |||||||  ||||||||||||| |||| ||||||||||||||||||||||    
T  9946421 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccaccac 9946498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 43499586 - 43499662
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||| |||||||| ||| || ||||||| |||||||||| ||| |||| |||||||||||||| |||||||    
T  43499586 tcctcgtgagcttagcttaattggtatggacaatgtataaaatatacaaggtccggggttcaaaccccggccaccac 43499662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 24079907 - 24079830
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | ||||||||||||||||||||    
T  24079907 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccgaccaccac 24079830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 35021534 - 35021460
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||||||| |||||| | |||||| |||||||| ||||||||||||| || | |||||| ||||||||||||    
T  35021534 gtcctcgtgagcttagctcagttgatatggacaatacataaaatatgcaaggttcggggttcgaaccccgaccac 35021460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 14577574 - 14577505
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    |||||||||||||||||| | ||| ||||||||||  |||| ||||||||||||| | ||||||||||||    
T  14577574 gtcctcgtgagtttagctcagttggtaaggacaatgcataatatatgcaaagtccggagttcaaaccccg 14577505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 16470298 - 16470375
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||  ||||| | ||| || |||||||  ||||||||||||| ||||||||||| |||||||||||||||    
T  16470298 gtcctcgtgagcgtagctcaattggtatggacaatgcataaaatatgcaaggtccagggttcgaaccccgaccaccac 16470375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 56565050 - 56564973
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | |||||| |||||||  ||||||||||||| ||| ||||||| |||||||| ||||||    
T  56565050 gtcctcgtgagcttagctcaattgatatggacaatgcataaaatatgcaaggtctagggttcgaaccccgaacaccac 56564973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 39171437 - 39171370
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccc 143  Q
    ||||||||||| |||||| | |||||| |||||||  ||||||||||||| || ||||||||||||||    
T  39171437 gtcctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcagggttcaaaccc 39171370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 43374340 - 43374265
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    |||||||||||| |||||| | |||||| |||||||  ||||||||||||| || | | |||||||||||||||||    
T  43374340 cgtcctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcggagttcaaaccccgaccac 43374265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 10261836 - 10261759
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  10261836 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 10261759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 21562619 - 21562696
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  21562619 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 21562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 26926777 - 26926700
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  26926777 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 26926700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 32180823 - 32180901
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||| | ||| ||  ||||||  |||||||||||||||||  |||||| |||||||||||||||    
T  32180823 cgtcctcgtgagcttagctcagttggtatagacaatgcataaaatatgcaaagtctggggttcgaaccccgaccaccac 32180901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 43330140 - 43330217
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  43330140 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 43330217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 7230274 - 7230351
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| ||||||||||  |||| |||||||| |||| ||||||||||| || |||||||    
T  7230274 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaacctcggccaccac 7230351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 11949830 - 11949753
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| |||| |||||| | ||| || |||||||  |||| |||||||| |||| ||||||||||||||||||||||    
T  11949830 gtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 34969444 - 34969383
Alignment:
Q  92 cttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||| | ||||||||||| |||||||| || |||||||||||| |||||||||||    
T  34969444 cttagttgatatgaacaatatataatatatgcaaggttcagggttcaaactccgaccaccac 34969383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 42139844 - 42139913
Alignment:
Q  82 gtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacc 151  Q
    |||||||||||||||||| || |||||||  |||| | |||||| |||| |||||||||||||| |||||    
T  42139844 gtgagtttagcttatttggtatggacaatgcataatacatgcaatgtccggggttcaaaccccggccacc 42139913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 49491182 - 49491259
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| |||| ||| |||| |||||||||| ||| ||||| ||||| ||||||| | |||||||| |||||||||||    
T  49491182 gtcctcttgagcttaacttagttgataaggataatgtataatatatgtaaagtccggagttcaaactccgaccaccac 49491259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 22164336 - 22164260
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||||||||||||||| ||| || | |||||  |||| ||||| || |||  |||||||||||||||||||||    
T  22164336 gtcctcgtgagtttagcttagttggtaggaacaatgcataatatatgtaaggtctggggttcaaaccccgaccacca 22164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 49021760 - 49021836
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||| |||||||||||  | ||| || |||||||| ||||||||||||| ||| ||| ||| ||||||||||||||    
T  49021760 gtccttgtgagtttagcgcagttggtatggacaatacataaaatatgcaaggtctaggattcgaaccccgaccacca 49021836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 49042046 - 49041971
Alignment:
Q  78 cctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||| ||||| || ||||||  ||||||  |||| |||||||| |||| |||||||||||||| |||||||    
T  49042046 cctcgtgagcttagcctagttgatatagacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 49041971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 2430994 - 2431068
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||||| | ||| ||  ||||||| ||||||||||||| ||    |||||||||||||||||||||    
T  2430994 ctcgtgagtttagctcagttggtattgacaatacataaaatatgcaaggtatgaggttcaaaccccgaccaccac 2431068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 8027461 - 8027387
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||||| | ||| |||||| |||  |||| ||||||||  ||  ||||||||||||||||||||||    
T  8027461 ctcgtgagtttagctcagttggtaaggataatgcataatatatgcaagatcgggggttcaaaccccgaccaccac 8027387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 35287575 - 35287497
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||| | ||| || | |||||  ||||||||||||| |||| |||||| ||||||| |||||||    
T  35287575 cgtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatgcaaggtccggggttccaaccccggccaccac 35287497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 39093631 - 39093565
Alignment:
Q  87 tttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||| | ||| ||||||||||  |||| |||||||||||  ||||||||||||||||| |||||    
T  39093631 tttagctcaattggtaaggacaatgcataatatatgcaaagtttagggttcaaaccccgactaccac 39093565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 50362206 - 50362140
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaacc 142  Q
    ||||||||||| |||||| | ||| || |||||||  |||| |||||||| ||||||||||||||||    
T  50362206 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccagggttcaaacc 50362140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 51450206 - 51450283
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  |||| |||||||| |||| | |||||||||||| |||||||    
T  51450206 cgtcctcgtgagcttagcttagttggta-ggacaatgcataagatatgcaaggtccggagttcaaaccccggccaccac 51450283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 4963419 - 4963343
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||| | |||||| |||||| | |||||||||| || || | |||||| ||||||| |||||||    
T  4963419 gtcctcgtgagtttagctcaattgatatggacaacacataaaatatgtaaggt-cggggttcgaaccccggccaccac 4963343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 5924647 - 5924720
Alignment:
Q  80 tcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||| |||||| | ||| || |||||||| |||| ||||| || |||| ||||||||||| ||||||||||    
T  5924647 tcgtgagcttagctcagttgctatggacaatacataatatatggaaggtccggggttcaaacctcgaccaccac 5924720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 12671815 - 12671738
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||| | ||| ||  ||||||  |||||||||||||  ||| |||||| |||| ||||||||||    
T  12671815 gtcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaagatccggggttcgaacctcgaccaccac 12671738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 21318292 - 21318243
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||  |||| |||||||| ||| |||||||||||||||||||||||    
T  21318292 ggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 21318243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 23809943 - 23810020
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || ||||||   |||| |||||||| || |||||||||||||||| |||||||    
T  23809943 gtcctcgtgagcttagctcagttggtatggacaaagcataatatatgcaaggttcagggttcaaaccccggccaccac 23810020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 24665058 - 24664981
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || ||| |||  |||| |||||||| |||| |||||| |||||||||||||||    
T  24665058 gtcctcgtgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcgaaccccgaccaccac 24664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 7371594 - 7371546
Alignment:
Q  97 ttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||||||| |||| |||||||| |||| |||||| |||||||    
T  7371594 ttgataaggacaatacataatatatgcaaggtccggggttcgaaccccg 7371546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 19479544 - 19479468
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||| ||||| |||||| | || ||| | |||||  |||| |||||||| |||| |||||||||||||||||||||    
T  19479544 gtccttgtgagcttagctcagttaatatgaacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 19479468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 54857645 - 54857605
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||| |||| |||||||||||||| |||||||    
T  54857645 ataaaatatgcaaggtccggggttcaaaccccggccaccac 54857605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 8269436 - 8269358
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||  |||||| | ||| ||||||||||| |||| |||||||| |||| ||||||||||||||||||||||    
T  8269436 cgtcctcgtgaacttagctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 8269358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 32962594 - 32962634
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  32962594 ataaaatatgcaaggtccagggttcaaaccccgaccaccac 32962634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 40411814 - 40411743
Alignment:
Q  82 gtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||| |||||| | ||| ||||||||||| ||||  |||| || |||||||||||||||||||||||||||    
T  40411814 gtgagcttagctcaattggtaaggacaatacataatgtatgtaaggtccagggttcaaaccccgaccaccac 40411743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 40680490 - 40680549
Alignment:
Q  88 ttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgac 147  Q
    |||||||| ||| ||| ||||||||||||||||||||| |||| ||||| ||||||||||    
T  40680490 ttagcttagttggtaatgacaatatataaaatatgcaaggtccggggttaaaaccccgac 40680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 26010215 - 26010293
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||||||||| | ||||||  |||||| ||||| | |||||| || | |||||||||||| |||||||||    
T  26010215 cgtcctcgtgagtttagctcaattgatagtgacaatgtataatacatgcaaggttcggggttcaaaccctgaccaccac 26010293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 52592494 - 52592428
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaacc 142  Q
    |||||||||||||||||| | ||| |||||||||||||||| |||||||| |||  || ||||||||    
T  52592494 gtcctcgtgagtttagctcaattggtaaggacaatatataatatatgcaaggtcggggattcaaacc 52592428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 17139584 - 17139507
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || |||||||  |||| |||| ||| |||| ||||||||||||||||||||||    
T  17139584 gtcctcgtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccaccac 17139507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 29506821 - 29506894
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    ||||||||||| ||| |||| ||| ||  ||||||| |||| |||||||| ||||||||||| |||||||||||    
T  29506821 gtcctcgtgagcttaacttagttggtatagacaatacataatatatgcaaggtccagggttcgaaccccgacca 29506894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 52043267 - 52043344
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||| | ||| || ||| |||  ||||||||||||| || | ||||||||| ||||||||||||    
T  52043267 gtcctcgtgagtttagctcagttggtatggataatgcataaaatatgcaatgttcggggttcaaatcccgaccaccac 52043344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 30937474 - 30937518
Alignment:
Q  81 cgtgagtttagcttatttgataaggacaatatataaaatatgcaa 125  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||    
T  30937474 cgtgagtttagcttagttgataaggacaatgtataatatatgcaa 30937518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 17917199 - 17917128
Alignment:
Q  82 gtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| | |||||| |||||||  |||||||||| || || | || |||||||||||||||||||    
T  17917199 gtgagtttagctcagttgatatggacaatgcataaaatatgtaaggttcgggattcaaaccccgaccaccac 17917128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 18166595 - 18166670
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    |||||||||| | |||||| | ||| ||  ||||||  |||| ||||||||||||| |||||||||||||||||||    
T  18166595 cgtcctcgtgggcttagctcagttggtatagacaatgcataatatatgcaaagtccggggttcaaaccccgaccac 18166670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 29234043 - 29233964
Alignment:
Q  74 gcgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||||| | ||| ||  ||||||  ||||||||||||| |||  |||||| |||||| ||||||||    
T  29234043 gcgtcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaaggtctggggttcgaaccccaaccaccac 29233964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 29739330 - 29739397
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaacc 142  Q
    ||||||||| || |||||| | ||| ||||||||||  ||||||||||||| |||| |||||||||||    
T  29739330 cgtcctcgttagcttagctcagttggtaaggacaatgcataaaatatgcaaggtccggggttcaaacc 29739397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 2994780 - 2994826
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||| ||||| |||||||| |||| |||||||||||||||||||    
T  2994780 ggacaatgtataatatatgcaaggtccggggttcaaaccccgaccac 2994826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 9527991 - 9528065
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||||||| |||||| | |||||  | |||||| ||||||||||||| || |  ||||||||||||||||||    
T  9527991 gtcctcgtgagcttagctaaattgatttgaacaatacataaaatatgcaaggttcgaggttcaaaccccgaccac 9528065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 11181999 - 11181925
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| |||||||| ||| || |||||||  || |||||||||| || | |||||||||||||| |||||||    
T  11181999 ctcgtgagcttagcttaattggtatggacaatgcatgaaatatgcaaggtgcggggttcaaaccccggccaccac 11181925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 18335859 - 18335813
Alignment:
Q  103 aggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||||    
T  18335859 aggacaatgtataaaatatgcaaggttcagggttcaaacctcgacca 18335813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 23405418 - 23405348
Alignment:
Q  83 tgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| ||| |||| ||| ||||||||||  |||| |||||||| ||||||||||| || ||||||||||||    
T  23405418 tgagcttaacttagttgttaaggacaatgcataatatatgcaaggtccagggttcgaatcccgaccaccac 23405348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 27533236 - 27533314
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||| | | ||| || |||||||  |||| |||||||| || | ||||||||||||||||||||||    
T  27533236 cgtcctcgtgagcttagatcagttggtagggacaatgcataatatatgcaaggttcggggttcaaaccccgaccaccac 27533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 41763222 - 41763148
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||||||| |||||| | ||| || ||| |||  ||||||||||||| |||| |||||||||||||| ||||    
T  41763222 gtcctcgtgagcttagctcagttggtagggataatgcataaaatatgcaaggtccggggttcaaaccccggccac 41763148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 1789630 - 1789565
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaac 141  Q
    ||||||||||| |||| ||| ||| ||  ||||||| ||| ||||||||| |||||||||||||||    
T  1789630 gtcctcgtgagcttagtttagttggtattgacaatacatacaatatgcaaggtccagggttcaaac 1789565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 5907793 - 5907862
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    |||| |||||| |||||| | |||  |||||||||  |||| |||||||| |||||||||||||||||||    
T  5907793 gtccccgtgagcttagctcagttggcaaggacaatgcataatatatgcaaggtccagggttcaaaccccg 5907862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 7158767 - 7158844
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||  | |||||| |||||||  ||||||||||||| |||| | |||  | |||||||||||||    
T  7158767 gtcctcgtgagtttagcccagttgatatggacaatgcataaaatatgcaaggtccggagtttgagccccgaccaccac 7158844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 8736457 - 8736506
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||  ||||||||||||| |||| |||||||||||||| |||||||    
T  8736457 ggacaatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 8736506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 16475977 - 16475904
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||||||| |||| ||| || | |||||| |||| ||||| || ||||| |||||||||||| |||||||    
T  16475977 ctcgtgagtttaacttagttggtaggaacaatacataatatatgtaaggtccaaggttcaaaccccaaccacca 16475904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 32944730 - 32944807
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||| ||||| |||||||| ||| || |||||||  |||| |||||||| |||  |||||| |||||||||||||||    
T  32944730 gtccttgtgagcttagcttagttggtatggacaatgcataatatatgcaacgtctggggttcgaaccccgaccaccac 32944807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 39252320 - 39252247
Alignment:
Q  80 tcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||| |||||| | ||||||  ||||||| |||| ||||| || ||||||||||||||| || ||||||||    
T  39252320 tcgtgagcttagctcagttgatatcgacaatacataatatatgtaaggtccagggttcaaactccaaccaccac 39252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 39302939 - 39303016
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| ||||||  ||||| | ||| ||||||||||| ||||||||||||| |||   ||||||||||||| |||||||    
T  39302939 gtccccgtgagcatagctcagttggtaaggacaatacataaaatatgcaaggtcggtggttcaaaccccggccaccac 39303016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 44243867 - 44243944
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||| | ||| || | |||||  |||| ||||| || |||||| ||||||||||| ||||||||    
T  44243867 gtcctcgtgagtttagctcagttggtaggaacaatgcataatatatgtaaggtccagagttcaaaccccaaccaccac 44243944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 44641521 - 44641598
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||| | |||||| |||||||  |||| |||||||| | || ||||||||| || | |||||||    
T  44641521 gtcctcgtgagtttagctcagttgatatggacaatgcataatatatgcaaggcccggggttcaaatcctggccaccac 44641598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 44801505 - 44801582
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| |||||||| |||| ||| || ||||| |  |||||||||||||||||| | |||||||||| | |||||||    
T  44801505 gtcctcttgagtttaacttagttggtatggacactgcataaaatatgcaaagtccggtgttcaaaccctggccaccac 44801582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 49183167 - 49183216
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaa 125  Q
    |||||||||||||||||| | ||| ||||||||||| |||| ||||||||    
T  49183167 gtcctcgtgagtttagctcagttggtaaggacaatacataatatatgcaa 49183216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 19262974 - 19262906
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaacccc 144  Q
    |||| |||||| |||||| | ||||||||||||||  |||| ||||||||||| | |||||| ||||||    
T  19262974 gtccacgtgagcttagctcagttgataaggacaatgcataacatatgcaaagttcggggttcgaacccc 19262906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 19620570 - 19620634
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaa 140  Q
    |||| |||||| |||||| | ||| ||||||||||| |||| |||||||| |||| |||||||||    
T  19620570 gtccccgtgagcttagctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaa 19620634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 26803518 - 26803450
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaacccc 144  Q
    ||||||||||  |||||| | ||| || |||||||  |||| ||||||||||||| |||||||||||||    
T  26803518 gtcctcgtgaacttagctcagttggtatggacaatgcataatatatgcaaagtccggggttcaaacccc 26803450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 28016256 - 28016180
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||| ||||||||||| | |||  | |||||||| |||||||||||||  ||| ||||||||||||| || |||||    
T  28016256 tcctcatgagtttagctcagttgggatggacaatacataaaatatgcaagatccggggttcaaaccccaactaccac 28016180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 40024371 - 40024294
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| ||||||||||||| ||  ||||||||||| |||||||||||||||||||| |||  ||||||| |||||||    
T  40024371 gtcctcctgagtttagcttagtttgtaaggacaatacataaaatatgcaaagtccagcgtttgaaccccggccaccac 40024294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 8227343 - 8227420
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| ||||||||||||| | ||||||||||||||  |||| ||||| |||||||||||||| || | ||||||||||    
T  8227343 gtccccgtgagtttagctcagttgataaggacaatgcataatatatgtaaagtccagggttcgaatctcgaccaccac 8227420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 19416508 - 19416585
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || |||||||  ||||||||||||| |||| |||||||||||||| |||||||    
T  19416508 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 19416585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 23198816 - 23198743
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    ||||||||||||||| || | ||| || | |||||  |||||||||||||||||| ||||||||||||||||||    
T  23198816 gtcctcgtgagtttaactcagttggtatgaacaatgcataaaatatgcaaagtccggggttcaaaccccgacca 23198743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 6579611 - 6579689
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| ||| || | ||| || ||||||| |||||||||||||| ||  | |||||||||||||||||||||    
T  6579611 cgtcctcgtgagcttaactcaattggtatggacaatgtataaaatatgcaaggtgtaaggttcaaaccccgaccaccac 6579689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 20763148 - 20763225
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  20763148 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 20763225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 29488714 - 29488791
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  29488714 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 29488791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 33232464 - 33232387
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  33232464 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 33232387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 34284606 - 34284529
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  34284606 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 34284529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 18773802 - 18773746
Alignment:
Q  97 ttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| |||||||  |||||||||| || |||| ||||||||||||||||||||||    
T  18773802 ttgatatggacaatgcataaaatatgtaaggtccggggttcaaaccccgaccaccac 18773746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 19599139 - 19599214
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacc 151  Q
    ||||| ||||||||| || | ||| || |||||||  |||| |||||||| |||| ||||||||||||||||||||    
T  19599139 gtcctggtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 41029271 - 41029342
Alignment:
Q  81 cgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||| |||||| | ||| |||||||||| ||||| |||||||| |||| |||||| || |||||||||||    
T  41029271 cgtgagcttagctcagttggtaaggacaatgtataatatatgcaaggtccggggttcgaatcccgaccacca 41029342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 47607971 - 47607900
Alignment:
Q  82 gtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| | ||| || ||||| || |||| |||||||| ||||||||||||||| ||| |||||||    
T  47607971 gtgagtttagctcagttggtagggacattacataatatatgcaaggtccagggttcaaactccggccaccac 47607900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 20135229 - 20135159
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaa-atatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||| |||||| | ||||||| |||||| |||||| |||||||| |||| |||||| |||||||    
T  20135229 gtcctcgtgagcttagctcagttgataaagacaatgtataaatatatgcaaggtcccgggttcgaaccccg 20135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 30622970 - 30623040
Alignment:
Q  80 tcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||||||| || | |||||  |||||||| |||| |||||||| ||| | ||||||||||||||||||    
T  30622970 tcgtgagtttaactcaattgattgggacaatacataatatatgcaaggtctatggttcaaaccccgaccac 30623040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 41250107 - 41250037
Alignment:
Q  83 tgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| | |||||||| ||||| ||||| |||||||| ||||  ||||||| |||||| ||||||    
T  41250107 tgagtttagctcagttgataagaacaatgtataatatatgcaaggtccgaggttcaagccccgaacaccac 41250037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 45046283 - 45046205
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||  ||||| | |||||| ||||| || |||| |||||||| |||| |||||||||| | |||||||||    
T  45046283 cgtcctcgtgagcatagctcagttgatatggacagtacataatatatgcaaggtccggggttcaaactctgaccaccac 45046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 6023303 - 6023380
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| |  |||||||   |||||||||||| || | ||||||||||||||||||||||    
T  6023303 gtcctcgtgagcttagctcagttggtttggacaatgcttaaaatatgcaaggttcggggttcaaaccccgaccaccac 6023380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 6781829 - 6781870
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  6781829 ggacaatgcataaaatatgcaaggtccagggttcaaaccccg 6781870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 16577927 - 16577850
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||| |||||||| | ||| || |||||||| |||| |||||||| |||  ||||||||||| || |||||||    
T  16577927 gtcctcgtgggtttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacctcggccaccac 16577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 16587735 - 16587812
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||| |||||||| | ||| || |||||||| |||| |||||||| |||  ||||||||||| || |||||||    
T  16587735 gtcctcgtgggtttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacctcggccaccac 16587812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 18023701 - 18023750
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||  |||| |||||||| ||||||||||||||| |||||||||||    
T  18023701 ggacaatgcataatatatgcaaggtccagggttcaaactccgaccaccac 18023750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 19036169 - 19036093
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||  | |||||||||||| ||||||    
T  19036169 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtctggagttcaaaccccggccacca 19036093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 20718467 - 20718543
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||  | |||||||||||| ||||||    
T  20718467 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtctggagttcaaaccccggccacca 20718543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 27462503 - 27462426
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||  ||||| | ||| || |||||||  |||| |||||||| |||| |||||||||||||| |||||||    
T  27462503 gtcctcgtgagcatagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 27462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 27833468 - 27833391
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| ||  ||||| | ||| ||||||||||  |||| ||||| || |||| ||||||||||||||||||||||    
T  27833468 gtcctcgtaagcctagctcagttggtaaggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 27833391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 30857242 - 30857319
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||||| ||| || |||||||  |||| |||||||| ||   | ||||||||||| ||||||||    
T  30857242 gtcctcgtgagtttagcttagttggtatggacaatgcataatatatgcaaggttttgagttcaaaccccaaccaccac 30857319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 35142216 - 35142139
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | |||||| |||||||  |||| |||||||||||    ||||| |||||||||||||||    
T  35142216 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccaccac 35142139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 47677644 - 47677571
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    |||||||||||||||||| | ||| | || |||||  ||||||||||||| || | ||||||||||||| ||||    
T  47677644 gtcctcgtgagtttagctcagttggttagaacaatgcataaaatatgcaatgttcggggttcaaaccccaacca 47677571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 7720248 - 7720192
Alignment:
Q  97 ttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| ||||||||||||| ||||| |||||   | ||||||||||||||||||||    
T  7720248 ttgatatggacaatatataatatatgtaaagttttgagttcaaaccccgaccaccac 7720192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 7735552 - 7735600
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||  ||||||||||||| ||| |||||||||| |||||||||||    
T  7735552 ggacaatgcataaaatatgcaaggtctagggttcaaagcccgaccacca 7735600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 10242511 - 10242551
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||||| |||||||||||||||||||| ||||||    
T  10242511 ataatatatgcaaggtccagggttcaaaccccgatcaccac 10242551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 21728815 - 21728759
Alignment:
Q  97 ttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||| ||| |||||||||| ||||||   ||||| ||||||||||||||||    
T  21728815 ttgataaggataatgtataaaatatacaaagtttcgggtttaaaccccgaccaccac 21728759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 32315238 - 32315294
Alignment:
Q  97 ttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| || |||| |||||||| || |||||||| ||||| |||||||||    
T  32315238 ttgataaggacattacataatatatgcaaggttcagggttcgaaccctgaccaccac 32315294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 40752906 - 40752830
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||||||||| |||||| | ||  || |||||||| |||| |||||||| |||| |||||| ||||||| ||||||    
T  40752906 gtcctcgtgagcttagctcagttagtatggacaatacataatatatgcaatgtccggggttcgaaccccggccacca 40752830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 42336064 - 42336140
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||||| ||||||| | ||||||||||||||  |||| | |||||| |||| |||||| || | |||||||||    
T  42336064 gtcctcgtgaatttagctcagttgataaggacaatgcataatacatgcaaggtccggggttcgaatctcgaccacca 42336140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 221073 - 221003
Alignment:
Q  83 tgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| | ||| || ||| |||| |||| |||||||||||| |||||||||||||||||||||||    
T  221073 tgagtttagctcagttggtagggataatacataatatatgcaaagtctagggttcaaaccccgaccaccac 221003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 15889404 - 15889482
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||| | ||| || |||||||  |||| |||||||| ||| |||||||||||||||||||||||    
T  15889404 cgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 15889482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 40837942 - 40837896
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||    
T  40837942 ggacaatatataaaatatgcaaggtccggggttcaaaccccgaccac 40837896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 40716016 - 40715939
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | |||||| |||||||  |||| |||||||| |||| |||||||||||||| |||||||    
T  40716016 gtcctcgtgagcttagctcaattgatatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 40715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 37462105 - 37462182
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  37462105 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 37462182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 16575389 - 16575312
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| ||||||||  || || ||||||||||||| ||||| || |||| | |||||||||| |||||||||    
T  16575389 gtcctcgtgagcttagcttaactggtatggacaatatataatatatgtaaggtccggagttcaaaccctgaccaccac 16575312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 41266380 - 41266457
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||| |||||||||||| | ||||||||||||| | |||| ||||| || || | ||||||| ||||||||||||||    
T  41266380 gtccttgtgagtttagctcaattgataaggacaaaacataatatatgtaaggttcggggttcacaccccgaccaccac 41266457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 16701647 - 16701571
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||| |||||| | ||| || |||||||  |||| |||||||| |||| || |||||||||||||||||||    
T  16701647 tcctcgtgagcttagctcagttggtagggacaatgaataatatatgcaaggtccgggattcaaaccccgaccaccac 16701571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 32200514 - 32200438
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||||||||| |||||| | |||| | |||||||  |||| |||||||| |||| |||||||| ||||||||||||    
T  32200514 gtcctcgtgagcttagctcagttgacagggacaatgcataatatatgcaaggtccggggttcaagccccgaccacca 32200438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 13864368 - 13864415
Alignment:
Q  106 acaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| |||| |||||||| |||| ||||||||||||||||||||||    
T  13864368 acaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 17861974 - 17862037
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaa 140  Q
    ||||||||||||||||| | ||| || |||||||  |||| ||||||||||| |||||||||||    
T  17861974 tcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaaagttcagggttcaaa 17862037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 37884687 - 37884734
Alignment:
Q  106 acaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| |||||| ||| || |||||||||||||||||||||||||||    
T  37884687 acaatacataaaagatgtaaggtccagggttcaaaccccgaccaccac 37884734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 39980504 - 39980579
Alignment:
Q  78 cctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||| |||||| | ||| || ||| |||  ||||||||||||| |||| | ||||||||||||||||||||    
T  39980504 cctcgtgagcttagctcagttggtatggataatgcataaaatatgcaaggtccggagttcaaaccccgaccaccac 39980579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 34191427 - 34191501
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||||||| |||||| | ||| |  |||||||  ||||||||||||| |||| |||||||||||||| ||||    
T  34191427 gtcctcgtgagcttagctcagttggttgggacaatgcataaaatatgcaaggtccggggttcaaaccccggccac 34191501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 35270748 - 35270682
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaacc 142  Q
    ||||||||||| |||||| | ||| |  |||||||  ||||||||||||| ||||||||||||||||    
T  35270748 gtcctcgtgagcttagctcagttggttgggacaatgcataaaatatgcaaggtccagggttcaaacc 35270682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 3445314 - 3445237
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| ||||||||||  ||||  ||||||| |||| ||||||||| |||| |||||||    
T  3445314 gtcctcgtgagcttagctcagttggtaaggacaatgcataatgtatgcaaggtccggggttcaaatcccggccaccac 3445237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 6489001 - 6489078
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || |||||||  |||| |||||||| |||  |||||||||||||| |||||||    
T  6489001 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccaccac 6489078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 18331701 - 18331778
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||| ||||| |||||| | ||| || |||||||  ||||||||||||| |||| |||||||| ||||| |||||||    
T  18331701 gtccttgtgagcttagctcacttggtatggacaatgcataaaatatgcaaggtccggggttcaagccccggccaccac 18331778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 22522868 - 22522791
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| ||||||   ||| || |||||||  |||| |||||||| |||| |||||||||||||| |||||||    
T  22522868 gtcctcgtgagcttagctcggttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 22522791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 34436845 - 34436922
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || |||||||  |||| |||||||| | || |||||||||||||| |||||||    
T  34436845 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaagggccggggttcaaaccccgcccaccac 34436922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 781878 - 781934
Alignment:
Q  97 ttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||| ||||||| |||||||||||||| |||  |||||| ||||| |||||||||    
T  781878 ttgatagggacaatgtataaaatatgcaaggtctggggttcgaaccctgaccaccac 781934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 3671233 - 3671281
Alignment:
Q  97 ttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    |||||||||| ||| ||||| |||||||| ||||||||||| |||||||    
T  3671233 ttgataaggataatgtataatatatgcaaggtccagggttcgaaccccg 3671281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 11637639 - 11637563
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||||||||| ||| || | ||| || |||||||  ||||||||||||| || | |||||| ||||||||||||||    
T  11637639 gtcctcgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcgaaccccgaccacca 11637563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 14474865 - 14474905
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||||| ||||||||||||||||||| |||||||    
T  14474865 ataatatatgcaaggtccagggttcaaaccccggccaccac 14474905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 20721072 - 20721120
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||| |||| |||||||| |||| |||||||||||||||| ||||    
T  20721072 ggacaatacataatatatgcaaggtccggggttcaaaccccgactacca 20721120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 27086097 - 27086149
Alignment:
Q  101 taaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| ||||| ||||| |||||||| ||||||||||||||||||  |||||||    
T  27086097 taagaacaatgtataatatatgcaaggtccagggttcaaaccccagccaccac 27086149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 239801 - 239870
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    |||||||||||||||||| | ||| ||||||||||  |||| ||||||||||||| | ||||||||||||    
T  239801 gtcctcgtgagtttagctcagttggtaaggacaatgcataatatatgcaaagtccggagttcaaaccccg 239870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 6723144 - 6723067
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||||| || | |||||| ||||||| ||||| |||||||| ||||||||||| |||| |||| |||||    
T  6723144 gtcctcgtgagtttaactcagttgatatggacaatgtataatatatgcaaggtccagggttcgaacctcgactaccac 6723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 21482586 - 21482509
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||||||| | ||| |||||| ||| ||||| |||||||| |||| |||||  |||||||||||||||    
T  21482586 gtcctcgtgagtttagctcagttggtaaggataatgtataatatatgcaaggtccggggtttgaaccccgaccaccac 21482509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 41187524 - 41187455
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||| |||||||| ||| || |||||||  |||||||||||||||||| |||||| |||||||    
T  41187524 gtcctcgtgagcttagcttagttggtatggacaatgcataaaatatgcaaagtccggggttcgaaccccg 41187455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 3708687 - 3708764
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  3708687 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 3708764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 11868729 - 11868652
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  11868729 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 11868652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 20990968 - 20990894
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| ||| |||| ||| ||  ||||||  ||||||||||||| || ||||||||||||||||||||||||    
T  20990968 ctcgtgagcttaacttagttgttatagacaatgcataaaatatgcaaggttcagggttcaaaccccgaccaccac 20990894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 29734684 - 29734758
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    |||||| |||||||||||| | |||||| |||||||  |||| |||||||| ||||  |||||||||||||||||    
T  29734684 cgtccttgtgagtttagctcagttgatatggacaatgcataatatatgcaaggtccgtggttcaaaccccgacca 29734758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 35360122 - 35360045
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  35360122 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 35360045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 15251906 - 15251857
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaa 125  Q
    |||||||||||  ||||||| |||||| ||||||||||||||||||||||    
T  15251906 gtcctcgtgagcatagcttagttgatatggacaatatataaaatatgcaa 15251857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 25186305 - 25186232
Alignment:
Q  80 tcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||| | |||||| |||||||  |||| |||||||| |||| |||||||||||||  |||||||    
T  25186305 tcgtgagtttagctcagttgatatggacaatgcataatatatgcaaggtccggggttcaaaccccagccaccac 25186232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 27244651 - 27244724
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    ||||||||||| |||||| | |||||| |||||||  |||| |||||||| ||| |||||||||| ||||||||    
T  27244651 gtcctcgtgagcttagctcagttgatagggacaatgcataatatatgcaaggtctagggttcaaagcccgacca 27244724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 44746569 - 44746618
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||| ||||||||||||||||||| |||||| ||||||| |||||||    
T  44746569 ggacaatgtataaaatatgcaaagtccggggttcgaaccccggccaccac 44746618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 660861 - 660813
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||  |||| |||||||| ||||||||||||||||||||||||||    
T  660861 ggacaatgcataatatatgcaaggtccagggttcaaaccccgaccacca 660813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 8728850 - 8728890
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  8728850 ataaaatatgcaagatccagggttcaaaccccgaccaccac 8728890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 15427686 - 15427750
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaa 140  Q
    |||||| |||| |||||| | |||||| ||||||||||||| |||||||| ||| ||||||||||    
T  15427686 gtcctcatgagcttagctcagttgatatggacaatatataatatatgcaaggtctagggttcaaa 15427750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 23250350 - 23250310
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  23250350 ataatatatgcaaggtccagggttcaaaccccgaccaccac 23250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 3617087 - 3617162
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||||| | |||| | ||| ||||||||||  |||| ||| |||||||||||||||||||| ||| ||||||    
T  3617087 tcctcgtgagataagctcaattggtaaggacaatgcataatatacgcaaagtccagggttcaaactccggccacca 3617162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 4137996 - 4138062
Alignment:
Q  87 tttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||| | ||| |||||||||| ||||| |||||||| ||||  | |||||||||||||||||||    
T  4137996 tttagctcaattggtaaggacaatgtataatatatgcaaggtccgagattcaaaccccgaccaccac 4138062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 17142827 - 17142901
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| |||||| | ||| ||  |||||| ||||| ||||||||||||  | ||||||||||||||||||||    
T  17142827 ctcgtgagcttagctcagttggtagtgacaatgtataatatatgcaaagtctggagttcaaaccccgaccaccac 17142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 20565139 - 20565065
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| |||||| | ||| || |||||||  |||| |||||||| |||| ||||||||||||| ||||||||    
T  20565139 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 20565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 31815951 - 31815877
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| ||| || | ||| || |||||||  |||| |||||||| |||| ||||||||||||||||||||||    
T  31815951 ctcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 4180728 - 4180765
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  4180728 ataaaatatgcaaggtccggggttcaaaccccgaccac 4180765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 10735898 - 10735821
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || |||| ||  |||| |||||||| |||| |||||||||||||| |||||||    
T  10735898 gtcctcgtgagcttagctcagttggtagggacgatgcataatatatgcaaggtccggggttcaaaccccggccaccac 10735821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 28277743 - 28277694
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaa 125  Q
    |||||||||||||||||||| ||| ||||||||||  |||| ||||||||    
T  28277743 gtcctcgtgagtttagcttagttggtaaggacaatgcataatatatgcaa 28277694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 29133551 - 29133474
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| ||||||||| | ||| || | |||||  |||||||||||||  || ||||||| |||||||||||||||    
T  29133551 gtcctcgtaagtttagctcagttggtatgaacaatgcataaaatatgcaagatctagggttcgaaccccgaccaccac 29133474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 29544621 - 29544698
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||| ||||| |||||| | ||| || |||||||  |||| |||||||| |||| |||||||||||||| |||||||    
T  29544621 gtcctagtgagcttagctcaattggtagggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 29544698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 34469939 - 34469862
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| ||| |||| |||||||| |||||  |||   ||||||| |||| |||||| |||||||||||||||    
T  34469939 gtcctcgtgagcttaacttagttgataagaacaatgcatagcttatgcaaggtccggggttcgaaccccgaccaccac 34469862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 38202847 - 38202900
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtc 129  Q
    ||||| ||||| |||||||| ||| |||||| ||| ||||||||||||||||||    
T  38202847 gtccttgtgagcttagcttaattggtaaggataatgtataaaatatgcaaagtc 38202900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 3113773 - 3113721
Alignment:
Q  97 ttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    ||||||||||||||  ||||||||||||| |||| || |||||| ||||||||    
T  3113773 ttgataaggacaatgcataaaatatgcaaggtccgggattcaaatcccgacca 3113721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 3197146 - 3197071
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    |||||||||||||||||| | ||| || |||||||  |||| |||||||| || | || ||||||||||||||||||    
T  3197146 gtcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaaggttc-ggattcaaaccccgaccacca 3197071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 18693715 - 18693655
Alignment:
Q  90 agcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    |||||| ||| | ||||||||  |||| ||||||||  |||||||||||||||||||||||    
T  18693715 agcttagttggttaggacaatgcataatatatgcaagatccagggttcaaaccccgaccac 18693655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 20200736 - 20200776
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||||||| ||||||||||||||||||| |||||||    
T  20200736 ataatatatgcaaggtccagggttcaaaccccggccaccac 20200776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 28120696 - 28120644
Alignment:
Q  101 taaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||| |||| |||||||   |||||||||||||||||||||    
T  28120696 taaggacaatacataatatatacaaagtcagaggttcaaaccccgaccaccac 28120644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 36264509 - 36264469
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  36264509 ataatatatgcaaagttcggggttcaaaccccgaccaccac 36264469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 36648856 - 36648780
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||| |||||| | ||| || |||||||  |||  |||||||| ||| |||||| ||||||||||||||||    
T  36648856 tcctcgtgagcttagctcagttggtatggacaatgaataggatatgcaaggtctagggtttaaaccccgaccaccac 36648780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 8999921 - 8999881
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  8999921 ataatatatgcaaagtccagggttcaaaccccgaccaccac 8999881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 29652213 - 29652288
Alignment:
Q  77 tcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||| ||||||||||| | |||||||| |||||  |||| |||||||| |||||| ||||||||| |||||||||    
T  29652213 tcctcatgagtttagctcagttgataagaacaatgcataatatatgcaaggtccagagttcaaacctcgaccacca 29652288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 36781406 - 36781477
Alignment:
Q  80 tcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacc 151  Q
    |||||||  ||||| | ||| ||||||||||| |||| ||||||||||||| ||||| ||||||||||||||    
T  36781406 tcgtgagcctagctcagttggtaaggacaatacataatatatgcaaagtccggggtttaaaccccgaccacc 36781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 19163604 - 19163526
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||| | ||| || |||||||  ||||  ||||||| |||| ||||||||||||||||||||||    
T  19163604 cgtcctcgtgagcttagctcagttggtatggacaatgcataatttatgcaaggtccggggttcaaaccccgaccaccac 19163526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 20665430 - 20665353
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  20665430 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 20665353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 30550793 - 30550716
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  30550793 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 30550716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 33482213 - 33482147
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||||||||| |||||| |||||||  ||||  ||||||| |||||||||||||| ||||    
T  33482213 ctcgtgagtttagcttagttgatagggacaatgcataatttatgcaaggtccagggttcaaatcccg 33482147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 34438426 - 34438472
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||||    
T  34438426 ggacaatatataaaatatgcaaggtccggggttgaaaccccgaccac 34438472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 44215542 - 44215465
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||||||| |||||||| ||| || |||||||  ||||||||||||| |||| | |||||||||||| |||||||    
T  44215542 cgtcctcgtgagcttagcttagttggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 44215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 12800939 - 12800890
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| |||| |||||||| |||| ||||||||||||||||||||||    
T  12800939 ggacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 12800890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 14303159 - 14303232
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    |||||||||||||||||| | ||| || ||||||| ||||| |||| ||| ||||| ||||| |||||||||||    
T  14303159 gtcctcgtgagtttagctcagttggtatggacaatgtataatatatacaaggtccaaggttcgaaccccgacca 14303232  T

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Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 19260646 - 19260569
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||| ||||||||||| |||||| | |||||  |||| ||||| || |||| |||||||||||||| |||||||    
T  19260646 gtcctcgtaagtttagcttagttgatatgtacaatgcataatatatgtaaggtccggggttcaaaccccggccaccac 19260569  T

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Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 27587215 - 27587292
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| ||||||||||  || | |||||||| |||| |||||||||||||| |||||||    
T  27587215 gtcctcgtgagcttagctcagttggtaaggacaatgcatgatatatgcaaggtccggggttcaaaccccggccaccac 27587292  T

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Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 29499765 - 29499842
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | ||| || |||||||  ||||||||||||| ||||||||||| |||||| | ||||||    
T  29499765 gtcctcgtgagcttagctcaattggtatggacaatgcataaaatatgcaaggtccagggttcgaaccccaaacaccac 29499842  T

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Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 32555248 - 32555317
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    |||||||||||||||||||| ||| || |||||||  ||||||||||||| || || ||||| |||||||    
T  32555248 gtcctcgtgagtttagcttagttggtatggacaatgcataaaatatgcaaggttcaaggttcgaaccccg 32555317  T

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Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 27718961 - 27718885
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||||||||| |||||| | |||||| |||||||  |||| |||||||| |||| | |||||||| ||||||||||    
T  27718961 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

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Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 8881271 - 8881346
Alignment:
Q  78 cctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||| |||| |||||| | ||| || |||||||  |||| |||||||| ||||||||||||||||||| |||||||    
T  8881271 cctcatgagcttagctgacttggtagggacaatgcataatatatgcaaggtccagggttcaaaccccggccaccac 8881346  T

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Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 6314390 - 6314336
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtcc 130  Q
    ||||||||||| |||||| | ||||||||||||||  ||||||||||||| ||||    
T  6314390 gtcctcgtgagcttagctcagttgataaggacaatgcataaaatatgcaaggtcc 6314336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 8137928 - 8138002
Alignment:
Q  75 cgtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    ||||||||| || |||||| | ||| || |||||||  ||||||||||||||||   ||||||||||||||||||    
T  8137928 cgtcctcgtaagcttagctcagttggtatggacaatgcataaaatatgcaaagtttggggttcaaaccccgacca 8138002  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 24838210 - 24838160
Alignment:
Q  103 aggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||  ||||||||||||| |||| |||||||||||||| |||||||    
T  24838210 aggacaatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 24838160  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 40679765 - 40679719
Alignment:
Q  107 caatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||||||||| |||| ||||||||||| || |||||||    
T  40679765 caatatataaaatatgcaaggtccggggttcaaacctcggccaccac 40679719  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 12061609 - 12061658
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||| |||||||| || |||||||||||  |||||||||||    
T  12061609 ggacaatatataatatatgcaaggttcagggttcaaagtccgaccaccac 12061658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 24023445 - 24023408
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccac 150  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  24023445 ataaaatatgcaaggtccggggttcaaaccccgaccac 24023408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 27134483 - 27134410
Alignment:
Q  80 tcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| || | ||| || | ||||| ||||| ||||||||||||| |||||||||| ||||| |||||    
T  27134483 tcgtgagtttaactcagttggtatgaacaatgtataatatatgcaaagtccggggttcaaactccgacaaccac 27134410  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 37750063 - 37749990
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||||||||||||| | |||||| | |||||  |||| ||||||||||||| |||||  ||||||| ||||||    
T  37750063 ctcgtgagtttagctcagttgatatgaacaatgcataatatatgcaaagtccggggtttgaaccccggccacca 37749990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 37938489 - 37938562
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgacca 149  Q
    |||||||||||||||||| | ||| || ||| |||  |||| |||||||||||||  |||||||| ||||||||    
T  37938489 gtcctcgtgagtttagctcagttggtatggataatgcataatatatgcaaagtccgaggttcaaatcccgacca 37938562  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 39433404 - 39433481
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| |||||| | |||||| | |||||| ||||||||||||| |||  |||||| ||| ||| |||||||    
T  39433404 gtcctcgtgagcttagctcagttgatatgaacaatacataaaatatgcaaggtctggggttcgaacgccggccaccac 39433481  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 11708980 - 11709056
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccacca 152  Q
    ||||||||||| |||||| | ||| || |||||||  |||| |||||||| ||||   |||||||||||||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccacca 11709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 15001305 - 15001265
Alignment:
Q  113 ataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||| ||||| ||||||||||||| |||||||    
T  15001305 ataaaatatgcaaggtccaaggttcaaaccccggccaccac 15001265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 4463 - 4529
Alignment:
Q  79 ctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||||||||| |||||| |||||||  ||||  ||||||| |||||||||||||| ||||    
T  4463 ctcgtgagtttagcttagttgatagggacaatgcataatttatgcaaggtccagggttcaaatcccg 4529  T

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Target: scaffold0071 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 53447 - 53496
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||||| |||||||| |||| || |||||||||||||||||||    
T  53447 ggacaatatataacatatgcaaggtccgggattcaaaccccgaccaccac 53496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 15997 - 15920
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    ||||||||||| ||| || | ||| |||||||||| ||||| |||||||| |||  |||||||||||||  |||||||    
T  15997 gtcctcgtgagcttaactcaattggtaaggacaatgtataatatatgcaaggtctggggttcaaaccccagccaccac 15920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 22905 - 22974
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||| |||| ||| |||||| | |||||  ||||||||||||| ||||  |||||||||||||    
T  22905 gtcctcgtgagcttagtttagttgatatgaacaatgcataaaatatgcaaggtccgaggttcaaaccccg 22974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 53419 - 53370
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||  ||||||||||||| |||  ||||||||||||||||||||||    
T  53419 ggacaatgcataaaatatgcaaggtctggggttcaaaccccgaccaccac 53370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 161163 - 161212
Alignment:
Q  104 ggacaatatataaaatatgcaaagtccagggttcaaaccccgaccaccac 153  Q
    |||||||  ||||||||||||| || | ||||||||||||||||||||||    
T  161163 ggacaatgcataaaatatgcaaggttcggggttcaaaccccgaccaccac 161212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 185257 - 185326
Alignment:
Q  76 gtcctcgtgagtttagcttatttgataaggacaatatataaaatatgcaaagtccagggttcaaaccccg 145  Q
    ||||||||||| |||||| | ||| || |||||||  |||||||||||||  ||| ||||||||||||||    
T  185257 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaagatccggggttcaaaccccg 185326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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