View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7958_low_3 (Length: 319)
Name: NF7958_low_3
Description: NF7958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7958_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 11 - 299
Target Start/End: Original strand, 37253909 - 37254197
Alignment:
| Q |
11 |
cataggtgctcaaataagtattttcaaagaaaaagctagtcagatgacnnnnnnnnaatacatttcagtcaaatgttaatttatttaaataaatatgata |
110 |
Q |
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| T |
37253909 |
cataggtgctcaaataagtattttcaaagaaaaagctagtcagatgacttttttttaatacatttcagtcaaatgttaatttatttaaataaatatgata |
37254008 |
T |
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| Q |
111 |
tgaaatattatcatatttttaaaatagaccatttccgctatctttggctagtattttactattcatttttgtattttaatttttaacattgcaaaaaatg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37254009 |
tgaaatattatcatatttttaaaatagaccatttccgctatctttggctagtattttactattcatttttgtattttaatttttaacattgcaaaaaatg |
37254108 |
T |
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| Q |
211 |
taacttaacgaaccaaatgtcatgcagatatgtagatcagttttcaagatctttatatatggagtacaaacagtatggaatccacgtgc |
299 |
Q |
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| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37254109 |
ttacttaacgaaccaaatgtcatgcagatatgtagatcagttttcaagatctttatatatggagtacaaacagtatggaatccacgtgc |
37254197 |
T |
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