View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7959_low_6 (Length: 336)
Name: NF7959_low_6
Description: NF7959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7959_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 37303169 - 37303486
Alignment:
| Q |
1 |
tatctccataccttcaacaccaaatccatttcctccggttcaactaaaaccatcgccttctctaaagacatggtcttcaccactcaccaagactgtaaaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37303169 |
tatctccataccttcaacaccaaatccatttcctccggttcaactaaaaccattgccttctctaaagacatggtcttcaccactcaccaagactgtaaaa |
37303268 |
T |
|
| Q |
101 |
tccgcgtctggaaccaccaccaccacaaaaacaacaacaaccaccgcaagttaaccactcttcccactgtcaacgaccgtctccgccgtttcctcctccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
37303269 |
tccgcgtctggaaccaccaccaccacaaaaacaacaacaaccaccggaagttaaccactcttcccactgtcaacgaccgtttccgccgtttcctcctccc |
37303368 |
T |
|
| Q |
201 |
aagtaactacatcaacatccgtcgccacgtaaaacgtctatggattgaacatgccgacgctgtcaccgacctcacagtctccaacggcgttatctactcg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||| |
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| T |
37303369 |
aagtaactacatcaacatccgtcgccacgtaaaacgtctctggattgaacatgccgacgccgtcaccgaccttgcagtttcaaacggcgttatctactcc |
37303468 |
T |
|
| Q |
301 |
gtttcatgggacaaaaca |
318 |
Q |
| |
|
|||||||||||||||||| |
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| T |
37303469 |
gtttcatgggacaaaaca |
37303486 |
T |
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