View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7960_low_37 (Length: 285)
Name: NF7960_low_37
Description: NF7960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7960_low_37 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 15 - 270
Target Start/End: Original strand, 10764583 - 10764838
Alignment:
| Q |
15 |
tattaacagctatggaaagcgcatgttgtttgctgcaatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttc |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10764583 |
tattaacagctatggaaagcgcatgttgtttgctgcaatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttc |
10764682 |
T |
 |
| Q |
115 |
caaatttagcaagccaagatgttgtaaattccctagacttggaacttgtccaaccaatttgtttgttcctatgtctagtaattgtatgacagacgcattt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10764683 |
caaatttagcaagccaagatgttgtaaattccctagacttggaacttgtccaaccaatttgtttgttcctatgtctagtaattgtatgacagaagcattt |
10764782 |
T |
 |
| Q |
215 |
gcaatcgaaacagggattgtacctgagaattgatttcctccaaaatttaatatttt |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10764783 |
gcaatcgaaacagggattgtacctgagaattgatttcctccaaaatttaatatttt |
10764838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 256
Target Start/End: Complemental strand, 10610430 - 10610227
Alignment:
| Q |
53 |
tttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattccctagac |
152 |
Q |
| |
|
||||||||||||||||||||||||||||| || || ||||||| ||| |||| ||| | ||||||| | ||| || ||||| | |||| ||| |||||| |
|
|
| T |
10610430 |
tttgtcaaatattttaaaaactctaaatctatagttgaattgttaccgaaatagttgtattccaaactcagccagtaaagatctggtaacttctctagac |
10610331 |
T |
 |
| Q |
153 |
ttggaacttgtccaaccaatttgtttgttcctatgtctagtaattgtatgacagacgcatttgcaatcgaaacagggattgtacctgagaattgatttcc |
252 |
Q |
| |
|
||||||||||||||||||| |||||| |||| || | || ||||| | ||| ||||||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
10610330 |
ttggaacttgtccaaccaaattgttttgacctaaatcaattatttgtagggaagaagcatttgcaatggaaacagggattggacctgagaattgatttcc |
10610231 |
T |
 |
| Q |
253 |
tcca |
256 |
Q |
| |
|
|||| |
|
|
| T |
10610230 |
tcca |
10610227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 257
Target Start/End: Complemental strand, 10563750 - 10563543
Alignment:
| Q |
50 |
caatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattcccta |
149 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || | ||||||| |||||||||||| | | | ||| ||||| || ||||| |||||| ||| ||| |
|
|
| T |
10563750 |
caatttgtcaaatagtttaaaaactctaaatctataattgaattgttacctaaattgttgtatccaaaacttagccagtaaagatcttgtaacttctcta |
10563651 |
T |
 |
| Q |
150 |
gacttggaacttgtccaaccaatttgtttgttcctatgtctagtaattgtatgacagacgcatttgcaatcgaaacagggattgtacctgagaattgatt |
249 |
Q |
| |
|
|||||||||||||||| ||||| | |||| ||| ||| |||| ||||| | ||| |||||| |||| |||| |||||||| ||||||||||||||| |
|
|
| T |
10563650 |
gacttggaacttgtcccaccaaatagttttgagctaagtcgagtacttgtagggaagaagcatttacaatggaaatagggattggacctgagaattgatt |
10563551 |
T |
 |
| Q |
250 |
tcctccaa |
257 |
Q |
| |
|
| |||||| |
|
|
| T |
10563550 |
tgctccaa |
10563543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 10748501 - 10748622
Alignment:
| Q |
50 |
caatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattcccta |
149 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || || ||||||| ||| |||| ||| ||||||||||||||| || ||||| |||||| ||| ||| |
|
|
| T |
10748501 |
caatttgtcaaatactttaaaaactctaaatcgatagttgaattgttaccgaaatagttgtcttccaaatttagccagtaaagatcttgtaacttctcta |
10748600 |
T |
 |
| Q |
150 |
gacttggaacttgtccaaccaa |
171 |
Q |
| |
|
||||||||||||| || ||||| |
|
|
| T |
10748601 |
gacttggaacttgccccaccaa |
10748622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 10603473 - 10603358
Alignment:
| Q |
53 |
tttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattccctagac |
152 |
Q |
| |
|
|||||||| ||||||||||||| ||||| ||||| || |||||||||||| |||| ||||||||||||||| ||||| || || |||||||||| |
|
|
| T |
10603473 |
tttgtcaatgattttaaaaactccaaatcaattgttgagttgtcacctaaaatgttcatttccaaatttagcaaataaagatcttttagcttccctagac |
10603374 |
T |
 |
| Q |
153 |
ttggaacttgtccaac |
168 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
10603373 |
ttggaacttgtccaac |
10603358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 10218232 - 10218308
Alignment:
| Q |
50 |
caatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaa |
126 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||| |||| |||||||||||||||| ||| | ||||||| ||||||| |
|
|
| T |
10218232 |
caatttgtcaaagattttaaaaactccaaatcctttgttgaattgtcacctaaatagttgtattccaaacttagcaa |
10218308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 255
Target Start/End: Complemental strand, 7191725 - 7191523
Alignment:
| Q |
53 |
tttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattccctagac |
152 |
Q |
| |
|
|||||||| |||||||||||||||||||| | |||||||||| ||||||| ||||| || | ||||| | | ||||| ||||| |||||||||| |
|
|
| T |
7191725 |
tttgtcaaggattttaaaaactctaaatccttagtggaattgttacctaaactgtttagctctagatttaaccgtcgaagatcatgtaacttccctagac |
7191626 |
T |
 |
| Q |
153 |
ttggaacttgtccaaccaatttgtttgttcctatgtctagtaattgtatgacagacgcatttgcaatcgaaacagggattgtacctgagaattgatttcc |
252 |
Q |
| |
|
||||||||||||| ||||| |||||| ||| ||| || || | ||| ||||||| ||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
7191625 |
ttggaacttgtccgaccaaattgttttgatctaagtcaagattaaatagggaagaagcatttgaaatggaaatagggattgtacctgagaattgatttcc |
7191526 |
T |
 |
| Q |
253 |
tcc |
255 |
Q |
| |
|
||| |
|
|
| T |
7191525 |
tcc |
7191523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 10718429 - 10718514
Alignment:
| Q |
95 |
tcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattccctagacttggaacttgtccaaccaatttgtttgt |
180 |
Q |
| |
|
||||||||||||||| || ||||||||| || | ||||| |||||| | ||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
10718429 |
tcacctaaattgtttgattgcaaatttagaaatcgaagattttgtaactcccctatacttggaacttgtccaaccaaattgtttgt |
10718514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 165
Target Start/End: Complemental strand, 10579717 - 10579615
Alignment:
| Q |
63 |
attttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattccctagacttggaacttg |
162 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||| ||||| |||| |||| ||||| | | ||| | |||| |||||||||| ||||||||| |
|
|
| T |
10579717 |
attttaaaaactctaaatccttactggaattgtcacctaatttgttatcttgcaaacttagcgaccaaagtttctgtagcttccctagacatggaacttg |
10579618 |
T |
 |
| Q |
163 |
tcc |
165 |
Q |
| |
|
||| |
|
|
| T |
10579617 |
tcc |
10579615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 10589926 - 10590028
Alignment:
| Q |
63 |
attttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattccctagacttggaacttg |
162 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||| ||||| |||| |||| ||||| | | ||| | |||| |||||||||| ||||||||| |
|
|
| T |
10589926 |
attttaaaaactctaaatccttactggaattgtcacctaatttgttatcttgcaaacttagcgaccaaagtttctgtagcttccctagacatggaacttg |
10590025 |
T |
 |
| Q |
163 |
tcc |
165 |
Q |
| |
|
||| |
|
|
| T |
10590026 |
tcc |
10590028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 10742272 - 10742396
Alignment:
| Q |
137 |
tgtaaattccctagacttggaacttgtccaaccaatttgttt-gttc--ctatgtctagtaattgtatgacagacgcatttgcaatcgaaacagggattg |
233 |
Q |
| |
|
||||| ||||| ||| ||||||||||||||||||| |||||| | || ||| || ||| |||||| | |||| ||||||||||| |||| |||||||| |
|
|
| T |
10742272 |
tgtaacttcccaagatttggaacttgtccaaccaaattgttttgatcacctaaatcaagtgattgtaaggcagaagcatttgcaatggaaatagggattg |
10742371 |
T |
 |
| Q |
234 |
tacctgagaattgatttcctccaaa |
258 |
Q |
| |
|
||||| |||||||||| ||||||| |
|
|
| T |
10742372 |
gacctgtgaattgatttactccaaa |
10742396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 10599793 - 10599693
Alignment:
| Q |
68 |
aaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattccctagacttggaacttgtccaa |
167 |
Q |
| |
|
||||||| ||||||||||| || ||||||||||| |||| ||||||||||||||| ||||| || || ||||||||||||||||||||||||| |
|
|
| T |
10599793 |
aaaaactgcaaatccattgttgagctgtcacctaaaatgttcatttccaaatttagcaaataaagatcttttagcttccctagacttggaacttgtccaa |
10599694 |
T |
 |
| Q |
168 |
c |
168 |
Q |
| |
|
| |
|
|
| T |
10599693 |
c |
10599693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 9837814 - 9837932
Alignment:
| Q |
50 |
caatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaaattcccta |
149 |
Q |
| |
|
|||||||||| | ||| |||||| |||||||| | || ||||||||||||| | |||| ||| | ||||||||| ||||| ||||| ||||||| |
|
|
| T |
9837814 |
caatttgtcatagttttcaaaaaccctaaatccttagttgaattgtcacctagaatgttcatttcaagatttagcaaattaagatcttgtagcttcccta |
9837913 |
T |
 |
| Q |
150 |
gacttggaacttgtccaac |
168 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
9837914 |
gacttggaacttgtccaac |
9837932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 10653847 - 10653887
Alignment:
| Q |
209 |
gcatttgcaatcgaaacagggattgtacctgagaattgatt |
249 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
10653847 |
gcatttgcaatggaaatagggattgtacctgagaattgatt |
10653887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 17924881 - 17925112
Alignment:
| Q |
42 |
gtttgctgcaatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaa |
141 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| | | ||| | |||||| |
|
|
| T |
17924881 |
gtttactgcaatttgtcaaatattttaaaaactctaaatccatagttgaattatcacctaaattgttttcttccaaatttagaatggaaaggtcttgtaa |
17924980 |
T |
 |
| Q |
142 |
attccctagacttggaacttgtccaaccaatt---tgtttgttcctatgtctagtaattgtatgacagacgcatttgcaatcgaaacagggattgtacct |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||| | || ||||| || ||||| | |||| || ||||||||||||| |||||||| |||| |
|
|
| T |
17924981 |
attccctagacttggaacttgtccaaccaaattcatgttttctgataagtctaatatttgtagggcagaagcgtttgcaatcgaaaaagggattggacct |
17925080 |
T |
 |
| Q |
239 |
gagaattgatttcctccaaaatttaatatttt |
270 |
Q |
| |
|
||||||||||||||| |||||| |||||||| |
|
|
| T |
17925081 |
gagaattgatttcctgcaaaatcaaatatttt |
17925112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 99; Significance: 7e-49; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 42 - 259
Target Start/End: Complemental strand, 12931010 - 12930790
Alignment:
| Q |
42 |
gtttgctgcaatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaa |
141 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||| |||| ||| ||||| |||||| |
|
|
| T |
12931010 |
gtttactgcaatttgtcaaatattttaaaaactctaaatccatagttgaattgttacctaaattgttaacttccaaacttaggaaggaaagatcttgtaa |
12930911 |
T |
 |
| Q |
142 |
attccctagacttggaacttgtccaaccaatt---tgtttgttcctatgtctagtaattgtatgacagacgcatttgcaatcgaaacagggattgtacct |
238 |
Q |
| |
|
||||| ||||||||||||||||||||||| | |||| |||||| ||||| || ||||| | |||| ||||||||||||||| |||||||| |||| |
|
|
| T |
12930910 |
attcctaagacttggaacttgtccaaccaaattcatgttgtttcctaagtctaatatttgtagggcagaagcatttgcaatcgaagtagggattggacct |
12930811 |
T |
 |
| Q |
239 |
gagaattgatttcctccaaaa |
259 |
Q |
| |
|
|||||||||||| || ||||| |
|
|
| T |
12930810 |
gagaattgatttgctgcaaaa |
12930790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 12956812 - 12956582
Alignment:
| Q |
42 |
gtttgctgcaatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaa |
141 |
Q |
| |
|
|||| |||||||| ||||||||||||| ||| ||||||||||| || ||| ||| ||||||||||||| || ||||||||| | ||| | |||||| |
|
|
| T |
12956812 |
gtttactgcaattagtcaaatattttagaaattctaaatccatagttgaaatgttacctaaattgtttgattgcaaatttagattggaaaggtcttgtaa |
12956713 |
T |
 |
| Q |
142 |
attccctagacttggaacttgtccaaccaattt---gtttgttcctatgtctagtaattgtatgacagacgcatttgcaatcgaaacagggattgtacct |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||| ||||| ||||| || ||||| | |||| |||||||||||||||| |||||||| |||| |
|
|
| T |
12956712 |
attccctagacttggaacttgtccaaccaaattcatgttgtctcctaagtctaatatttgtagggcagaagcatttgcaatcgaaatagggattggacct |
12956613 |
T |
 |
| Q |
239 |
gagaattgatttcctccaaaatttaatattt |
269 |
Q |
| |
|
|||||||||||| || |||||| ||||||| |
|
|
| T |
12956612 |
gagaattgatttgctgcaaaatcgaatattt |
12956582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 260
Target Start/End: Complemental strand, 12947375 - 12947154
Alignment:
| Q |
42 |
gtttgctgcaatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaa |
141 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| ||||| || ||| ||| |||||||||||| ||||||| |||| ||| ||||| |||||| |
|
|
| T |
12947375 |
gtttactgcaatttgtcaaatattttaaaaactctaagtccatagttgaaatgttacctaaattgttaaattccaaacttaggaaggaaagatcttgtaa |
12947276 |
T |
 |
| Q |
142 |
attccctagacttggaacttgtccaaccaatt---tgtttgttcctatgtctagtaattgtatgacagacgcatttgcaatcgaaacagggattgtacct |
238 |
Q |
| |
|
||||| ||||||||||||||||||||||| | |||| ||||| ||||| | ||||| | |||| ||||||||||| |||| ||| |||| |||| |
|
|
| T |
12947275 |
attcctaagacttggaacttgtccaaccaaattcatgttgtgtcctaagtctaatctttgtagggcagaagcatttgcaattgaaataggaattggacct |
12947176 |
T |
 |
| Q |
239 |
gagaattgatttcctccaaaat |
260 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
12947175 |
gagaattgatttgctccaaaat |
12947154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 12898321 - 12898078
Alignment:
| Q |
21 |
cagctatggaaagcgcatgttgtttgctgcaatttgtcaaatattttaaaaactctaaa-tccattgtggaattgtcacctaaattgttttcttccaaat |
119 |
Q |
| |
|
||||||| |||||| ||| | |||| |||||||||||||||||||||||||| |||||| ||||| || ||| ||| |||||||||||| | ||||| |
|
|
| T |
12898321 |
cagctatcgaaagcacatttagtttactgcaatttgtcaaatattttaaaaaatctaaaatccatagttgaaatgttacctaaattgttgaatcccaaac |
12898222 |
T |
 |
| Q |
120 |
ttagcaagccaagatgttgtaaattccctagacttggaacttgtccaaccaatt---tgtttgttcctatgtctagtaattgtatgacagacgcatttgc |
216 |
Q |
| |
|
|||| | | ||||| |||||||||||||||||||||||||||||||||||| | ||||| | || ||||| || ||||| | ||| ||||| || |
|
|
| T |
12898221 |
ttagaatggaaagattttgtaaattccctagacttggaacttgtccaaccaaattcatgttttctgataagtctaatatttgtagggtagaagcattagc |
12898122 |
T |
 |
| Q |
217 |
aatcgaaacagggattgtacctgagaattgatttcctccaaaat |
260 |
Q |
| |
|
|||||||| ||| |||| ||| |||||||||||||||||||||| |
|
|
| T |
12898121 |
aatcgaaataggaattggaccagagaattgatttcctccaaaat |
12898078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 12905921 - 12905710
Alignment:
| Q |
42 |
gtttgctgcaatttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaagccaagatgttgtaa |
141 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| | || ||| ||| |||||||||||| | ||||| |||| | | ||||| |||||| |
|
|
| T |
12905921 |
gtttactgcaatttgtcaaatattttaaaaactctaaatccttagttgaaatgttacctaaattgttgaatcccaaacttagaatggaaagattttgtaa |
12905822 |
T |
 |
| Q |
142 |
attccctagacttggaacttgtccaaccaattt---gtttgttcctatgtctagtaattgtatgacagacgcatttgcaatcgaaacagggattgtacct |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||| || || ||||| || ||||| | |||| ||||| ||||||||| |||||||| ||| |
|
|
| T |
12905821 |
attccctagacttggaacttgtccaaccaaattcatgttttttgataagtctaatatttgtagggcagaagcattatcaatcgaaatagggattggacca |
12905722 |
T |
 |
| Q |
239 |
gagaattgattt |
250 |
Q |
| |
|
|||||||||||| |
|
|
| T |
12905721 |
gagaattgattt |
12905710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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