View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7960_low_8 (Length: 484)

Name: NF7960_low_8
Description: NF7960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7960_low_8
NF7960_low_8
[»] chr6 (29 HSPs)
chr6 (120-467)||(31500170-31500517)
chr6 (120-467)||(31494784-31495131)
chr6 (19-467)||(31514547-31515020)
chr6 (120-399)||(31473580-31473853)
chr6 (122-457)||(14745085-14745424)
chr6 (139-393)||(22396670-22396918)
chr6 (122-441)||(7847889-7848217)
chr6 (125-258)||(10907197-10907332)
chr6 (19-86)||(31473448-31473515)
chr6 (392-467)||(31475220-31475295)
chr6 (19-86)||(31494652-31494719)
chr6 (19-86)||(31500038-31500105)
chr6 (229-459)||(27122148-27122388)
chr6 (164-285)||(8404235-8404356)
chr6 (164-285)||(21038167-21038288)
chr6 (164-285)||(21083788-21083908)
chr6 (122-284)||(9190594-9190756)
chr6 (154-225)||(31494781-31494852)
chr6 (161-284)||(19547997-19548122)
chr6 (154-225)||(31500167-31500238)
chr6 (386-460)||(8885580-8885654)
chr6 (200-285)||(10641811-10641895)
chr6 (154-225)||(31473577-31473648)
chr6 (200-262)||(14965685-14965747)
chr6 (163-285)||(14980736-14980859)
chr6 (200-248)||(20147244-20147292)
chr6 (200-248)||(22185536-22185584)
chr6 (165-225)||(22396659-22396719)
chr6 (120-184)||(22396688-22396752)
[»] chr4 (15 HSPs)
chr4 (120-393)||(6820927-6821194)
chr4 (200-457)||(17418101-17418368)
chr4 (198-467)||(3576588-3576868)
chr4 (163-393)||(19728707-19728933)
chr4 (164-285)||(15873344-15873465)
chr4 (122-225)||(6821126-6821229)
chr4 (200-262)||(16285528-16285590)
chr4 (200-285)||(11555552-11555636)
chr4 (161-284)||(18557572-18557697)
chr4 (399-457)||(19728954-19729013)
chr4 (200-262)||(12228591-12228653)
chr4 (398-455)||(6820850-6820907)
chr4 (164-262)||(9563958-9564058)
chr4 (207-285)||(12136653-12136729)
chr4 (238-290)||(34635928-34635980)
[»] chr2 (15 HSPs)
chr2 (122-312)||(35922654-35922845)
chr2 (199-460)||(23247534-23247803)
chr2 (238-457)||(23907263-23907492)
chr2 (240-459)||(22521207-22521435)
chr2 (163-259)||(13361402-13361500)
chr2 (200-261)||(44586894-44586955)
chr2 (164-261)||(23656830-23656928)
chr2 (196-262)||(32252570-32252636)
chr2 (387-460)||(23246825-23246898)
chr2 (386-441)||(39527712-39527767)
chr2 (196-284)||(16858360-16858447)
chr2 (164-264)||(24724912-24725013)
chr2 (339-393)||(35922858-35922912)
chr2 (239-284)||(18988136-18988180)
chr2 (270-323)||(23246698-23246751)
[»] scaffold0170 (1 HSPs)
scaffold0170 (238-389)||(16809-16954)
[»] scaffold1043 (1 HSPs)
scaffold1043 (163-393)||(1687-1913)
[»] chr7 (9 HSPs)
chr7 (222-329)||(3089568-3089675)
chr7 (200-262)||(13477928-13477990)
chr7 (164-260)||(4532170-4532267)
chr7 (200-298)||(16074791-16074890)
chr7 (387-459)||(3089772-3089844)
chr7 (163-284)||(37946273-37946395)
chr7 (200-285)||(11655065-11655149)
chr7 (207-284)||(20025525-20025601)
chr7 (200-261)||(22615183-22615246)
[»] chr8 (3 HSPs)
chr8 (163-393)||(17862506-17862732)
chr8 (242-284)||(14422131-14422172)
chr8 (200-285)||(23658101-23658186)
[»] scaffold0010 (2 HSPs)
scaffold0010 (200-393)||(141813-142001)
scaffold0010 (399-457)||(141732-141792)
[»] scaffold0061 (1 HSPs)
scaffold0061 (238-460)||(18453-18684)
[»] chr3 (10 HSPs)
chr3 (164-285)||(21974783-21974904)
chr3 (164-285)||(21997214-21997335)
chr3 (164-285)||(13929182-13929303)
chr3 (164-285)||(16363042-16363161)
chr3 (167-285)||(22159358-22159475)
chr3 (195-258)||(13927329-13927392)
chr3 (200-258)||(17790498-17790556)
chr3 (200-258)||(19098940-19098998)
chr3 (163-285)||(4713270-4713393)
chr3 (238-284)||(27871254-27871299)
[»] chr5 (7 HSPs)
chr5 (238-329)||(19019413-19019504)
chr5 (200-284)||(24614936-24615019)
chr5 (200-284)||(24711334-24711417)
chr5 (200-284)||(24744330-24744413)
chr5 (200-284)||(24757096-24757179)
chr5 (387-459)||(19019313-19019386)
chr5 (195-265)||(13935351-13935423)
[»] scaffold0057 (1 HSPs)
scaffold0057 (159-262)||(40693-40797)
[»] scaffold1001 (1 HSPs)
scaffold1001 (200-285)||(980-1064)
[»] scaffold0145 (1 HSPs)
scaffold0145 (200-262)||(12126-12188)
[»] scaffold0385 (1 HSPs)
scaffold0385 (164-259)||(13798-13892)
[»] scaffold0092 (1 HSPs)
scaffold0092 (195-285)||(20092-20181)
[»] scaffold0094 (1 HSPs)
scaffold0094 (238-284)||(5426-5472)
[»] scaffold0290 (1 HSPs)
scaffold0290 (198-284)||(14788-14875)
[»] chr1 (1 HSPs)
chr1 (200-284)||(43155406-43155490)


Alignment Details
Target: chr6 (Bit Score: 308; Significance: 1e-173; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 120 - 467
Target Start/End: Original strand, 31500170 - 31500517
Alignment:
Q  120 ttgagaaaagtccagtacaatatttctggcaatcatgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactc 219  Q
    ||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  31500170 ttgagaaaagttcagtaaaatatttctggcaactatgttgagaaaagtccagtaacatatctctggcaaccatgttgagaaaagtccaataatataactc 31500269  T
Q  220 tggcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagt 319  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31500270 tggcaaaatgatgagtaagtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattcatgatgatctgtatttggtgaataagt 31500369  T
Q  320 gtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactattttagaattgaattgtgacattgtgt 419  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31500370 gttactgtgtctgtgtgcaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactattttagaattgaattgtgacattgtgt 31500469  T
Q  420 ttgtgaagattttggttcttattccgtaatgatattttttattgatgt 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31500470 ttgtgaagattttggttcttattccgtaatgatattttttattgatgt 31500517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 120 - 467
Target Start/End: Original strand, 31494784 - 31495131
Alignment:
Q  120 ttgagaaaagtccagtacaatatttctggcaatcatgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactc 219  Q
    ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  31494784 ttgagaaaagttcagtaaaatatctctggcaaccatgttgagaaaagtccagtaacatatctctggcaaccatgttgagaaaaatccaataatataactc 31494883  T
Q  220 tggcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagt 319  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31494884 tggcaaaatgatgagtaagtgtggtaccacattcatatagatcttaggactgagtccatatgcatacaaattcatgatgatctgtatttggtgaataagt 31494983  T
Q  320 gtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactattttagaattgaattgtgacattgtgt 419  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31494984 gttactgtgtctgtgtgcaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactattttagaattgaattgtgacattgtgt 31495083  T
Q  420 ttgtgaagattttggttcttattccgtaatgatattttttattgatgt 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31495084 ttgtgaagattttggttcttattccgtaatgatattttttattgatgt 31495131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 19 - 467
Target Start/End: Original strand, 31514547 - 31515020
Alignment:
Q  19 atggtgcatttaggagaggggaccgcgtgaacatagagagaagtcagaatgtacaagactccatgcgttgatgcatgtgcatgcgtacattggagtgtat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31514547 atggtgcatttaggagaggggaccgcgtgaacatagagagaagtcagaatgtacaagactccatgcgttgatgcatgtgcatgcgtacattggagtgtat 31514646  T
Q  119 tttg------------agaaaagtccagtacaatatttctggcaatcatgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtcc 206  Q
    ||||             ||     ||||||  ||| || ||||||  |||||||||||||| |||||| |||| |||| |||||||||||||||||||||    
T  31514647 tttgtggtggtttatttgatgccaccagtaagatacttttggcaactatgttgagaaaagttcagtaaaatatttctggcaaccatgttgagaaaagtcc 31514746  T
Q  207 agtaatataactctggcaa-aatgatgag---------------taagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaat 290  Q
    ||||||||| |||||||||  ||| ||||               ||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31514747 agtaatatatctctggcaatcatgttgagaaaagtccaataatataactctggtaccacattcatatagatcttaggactgagtccatatgcatacaaat 31514846  T
Q  291 tgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgac 390  Q
       ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31514847 ---tgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgcaacgacgaaggtgattctctgttgaggttcttatgaagattgttattggtgac 31514943  T
Q  391 tattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatattttttattgatgt 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31514944 tattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatattttttattgatgt 31515020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 120 - 399
Target Start/End: Original strand, 31473580 - 31473853
Alignment:
Q  120 ttgagaaaagtccagtacaatatttctggcaatcatgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactc 219  Q
    ||||||||||| || || |||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31473580 ttgagaaaagttcattaaaatatttctggcacccatgttgagaaaagtctagtaacatatctctggcaaccatgttgagaaaagtccagtaatataactc 31473679  T
Q  220 tggcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagt 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||    
T  31473680 tggcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatat------aaattgatgatgatctgtatttggtgaataagt 31473773  T
Q  320 gtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactattttaga 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31473774 gtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagatcgttattggtgactattttaga 31473853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 122 - 457
Target Start/End: Complemental strand, 14745424 - 14745085
Alignment:
Q  122 gagaaaagtccagtacaatatttctggcaatcatgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactctg 221  Q
    |||||||||||||||  ||| |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14745424 gagaaaagtccagtaatatacttctggcaactatgttgagaaaagttcagtaacatatctctgacaaccatgttgagaaaagtccagcaataaaactctg 14745325  T
Q  222 gcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgt 321  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | |  ||||| ||||||||||||||||||||    
T  14745324 gcaaaatgatgagtaggtgtggtaccacattcatataggtcttaggactgagtccatatgcata-aaacttacaatgatttgtatttggtgaataagtgt 14745226  T
Q  322 aactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat---------------tttagaattgaat 406  Q
    || | |||  |  ||         | ||||||||||||||| |||||||||||||| |||||||||||||||               ||| |||||||||    
T  14745225 aattatgtgag-atg---------atgtgattatctgttgatgttcttatgaagatggttattggtgactatatgtgttgtgactagtttggaattgaat 14745136  T
Q  407 tgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatttt 457  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  14745135 tgtgacattgtgtttgtgaagattttggttcttaggctgtaatgatatttt 14745085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 139 - 393
Target Start/End: Original strand, 22396670 - 22396918
Alignment:
Q  139 atatttctggcaatcatgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactctggcaaaatgatgagtaag 238  Q
    |||| ||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  22396670 atatctctggcaattatgttgaaaaaattccagtaacatatctctggcaaccatgttgagaaaagtctagtaatataactctggcaaaatgatgagtagg 22396769  T
Q  239 tgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgta 338  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || |||| |||||  |||||||||| |||| ||||||       ||||||      
T  22396770 tgtggtaccacattcatataggtcttaggactaagtccatatgcataaaatttgacgatgacttgtatttggttaatacgtgtaa------ttgtgtgag 22396863  T
Q  339 acgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 393  Q
    | || |||||||||||||||||||  |||||| |||||| |||||||||||||||    
T  22396864 atgatgaaggtgattatctgttgatattcttacgaagatggttattggtgactat 22396918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 122 - 441
Target Start/End: Complemental strand, 7848217 - 7847889
Alignment:
Q  122 gagaaaagtccagtacaatatttctggcaatcatgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactctg 221  Q
    ||||||||| || ||  ||| |||||||||  ||||||||||||||||  ||||||||||||  |||| ||||||||||||||||| |||||||||||||    
T  7848217 gagaaaagttcactaacatacttctggcaactatgttgagaaaagtcctataacatatctctagcaactatgttgagaaaagtccactaatataactctg 7848118  T
Q  222 gcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgt 321  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||||||||| ||||||||||||||||||||    
T  7848117 gcaaaacgatgagtaggtgtggtaccacattcatataggtcttaggattgagtttatatgcataaaaattgatgatgatttgtatttggtgaataagtgt 7848018  T
Q  322 aactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggt---------------gactattttagaattgaat 406  Q
    ||      ||  ||| |||||  ||||||||| | ||| || |||||||||||||| |||||||||               ||||||||| |||||||||    
T  7848017 aa------ctacgtgaaacgataaaggtgattgtatgtcgatgttcttatgaagatggttattggtgactatatgtgttgcgactatttttgaattgaat 7847924  T
Q  407 tgtgacattgtgtttgtgaagattttggttcttat 441  Q
    | ||||||||||||||||||||| |||||||||||    
T  7847923 tttgacattgtgtttgtgaagatcttggttcttat 7847889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 125 - 258
Target Start/End: Original strand, 10907197 - 10907332
Alignment:
Q  125 aaaagtccagtacaatatttctggcaatcatgttg-agaaaagtccagtaacatatctctgacaaccatgttg-agaaaagtccagtaatataactctgg 222  Q
    ||||||||||||  ||| |||||||||| |||| | |||||||||||||||||||  |||| |||| |||| | ||||||||||| ||||||||||||||    
T  10907197 aaaagtccagtaacatacttctggcaattatgtgggagaaaagtccagtaacatacttctggcaactatgtgggagaaaagtccattaatataactctgg 10907296  T
Q  223 caaaatgatgagtaagtgtggtaccacattcatata 258  Q
    |||||||| ||||| |||||||||||||||||||||    
T  10907297 caaaatgacgagtaggtgtggtaccacattcatata 10907332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 31473448 - 31473515
Alignment:
Q  19 atggtgcatttaggagaggggaccgcgtgaacatagagagaagtcagaatgtacaagactccatgcgt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31473448 atggtgcatttaggagaggggaccgcgtgaacatagagagaagtcagaatgtacaagactccatgcgt 31473515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 467
Target Start/End: Original strand, 31475220 - 31475295
Alignment:
Q  392 attttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatattttttattgatgt 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  31475220 attttagaattgaattgtgacattgtgtttgtgaagattttggttcttatgtcgtaatgatattttttattgatgt 31475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 31494652 - 31494719
Alignment:
Q  19 atggtgcatttaggagaggggaccgcgtgaacatagagagaagtcagaatgtacaagactccatgcgt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31494652 atggtgcatttaggagaggggaccgcgtgaacatagagagaagtcagaatgtacaagactccatgcgt 31494719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 31500038 - 31500105
Alignment:
Q  19 atggtgcatttaggagaggggaccgcgtgaacatagagagaagtcagaatgtacaagactccatgcgt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31500038 atggtgcatttaggagaggggaccgcgtgaacatagagagaagtcagaatgtacaagactccatgcgt 31500105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 229 - 459
Target Start/End: Original strand, 27122148 - 27122388
Alignment:
Q  229 gatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaa-ttgatgatgatctgtatttggtgaataagtgtaactgt 327  Q
    |||||||| || |||||||||||||||||||||||||||||||||| |||||||| | ||| | || |||||| |||||||| |||||| ||||||        
T  27122148 gatgagtaggtatggtaccacattcatataggtcttaggactgagttcatatgcacaaaaactcgaggatgatttgtatttgctgaatatgtgtaa---- 27122243  T
Q  328 gtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattg---------------gtgactattttagaattgaattgtgac 412  Q
       ||||||  |||| |||| |||||||||||||| ||||||||||||||  ||||||               |||||||||||  ||||||||||||||    
T  27122244 --ttgtgtgagacgatgaagatgattatctgttgatgttcttatgaagataattattgatgactatatgagttgtgactattttgaaattgaattgtgac 27122341  T
Q  413 attgtgtttgtgaagattttggttcttattccgtaatgatatttttt 459  Q
    |||||||||||||||||||| |||||||| | |||| |||| |||||    
T  27122342 attgtgtttgtgaagattttagttcttatactgtaaagataattttt 27122388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 8404235 - 8404356
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  8404235 aagtccagtaacatatctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaggagtggtaccacaatcatataggtc 8404334  T
Q  263 -ttaggactgagtccatatgcata 285  Q
     ||||||  ||| |||||||||||    
T  8404335 gttagga--gagaccatatgcata 8404356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 21038167 - 21038288
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||| ||||| ||| | ||| ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  21038167 aagtccagtaacatacctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaagagtgataccacaatcatataggtc 21038266  T
Q  263 -ttaggactgagtccatatgcata 285  Q
     ||||||  |||||||||||||||    
T  21038267 gttagga--gagtccatatgcata 21038288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 21083788 - 21083908
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||| ||||| ||| | ||| |||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  21083788 aagtccagtaacatacctctggcaaactatgatgagaaaagtccagtaac-taattctggcaaaatgatgagtaagagtggtaccacaatcatataggtc 21083886  T
Q  263 -ttaggactgagtccatatgcata 285  Q
     ||||||  |||||||||||||||    
T  21083887 gttagga--gagtccatatgcata 21083908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 122 - 284
Target Start/End: Complemental strand, 9190756 - 9190594
Alignment:
Q  122 gagaaaagtccagtacaatatttctggcaatcatgttg-agaaaagtccagtaacatatctctgacaaccatgttg-agaaaagtccagtaatataactc 219  Q
    ||||||||| || ||  ||| |||||||||| |||| | ||| ||||||||||||||| |||| ||||| |||| | ||||||||||| ||||||||||     
T  9190756 gagaaaagttcactaacatacttctggcaattatgtgggagagaagtccagtaacatacctctaacaactatgtgggagaaaagtccactaatataactt 9190657  T
Q  220 tggcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcat 284  Q
    ||| |||||  ||||||  | |||||||||||||||||||||| |||||  ||||||||||||||    
T  9190656 tggaaaaattgtgagtagctatggtaccacattcatataggtcatagga--gagtccatatgcat 9190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 31494781 - 31494852
Alignment:
Q  154 atgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactctggcaa 225  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  31494781 atgttgagaaaagttcagtaaaatatctctggcaaccatgttgagaaaagtccagtaacatatctctggcaa 31494852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 19547997 - 19548122
Alignment:
Q  161 gaaaagtccagtaacatatctctgacaaccatgttga-gaaaagtccagtaatataactctggcaaaatgatgag--taagtgtggtaccacattcatat 257  Q
    |||||||||||||| ||||||||| |||   || ||| |||||||||||||| ||| |||||||||  || |||   || || |||||||||||||||||    
T  19547997 gaaaagtccagtaatatatctctggcaatt-tgatgatgaaaagtccagtaacatatctctggcaacttggtgatgataggtatggtaccacattcatat 19548095  T
Q  258 aggtcttaggactgagtccatatgcat 284  Q
    ||||||||||| |||||||||||||||    
T  19548096 aggtcttaggaatgagtccatatgcat 19548122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 31500167 - 31500238
Alignment:
Q  154 atgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactctggcaa 225  Q
    |||||||||||||| |||||| |||| |||| |||| ||||||||||||||||||||| ||| |||||||||    
T  31500167 atgttgagaaaagttcagtaaaatatttctggcaactatgttgagaaaagtccagtaacatatctctggcaa 31500238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 460
Target Start/End: Complemental strand, 8885654 - 8885580
Alignment:
Q  386 gtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatttttta 460  Q
    |||| |||||| | |||||||||||||||||| ||||||||||||| |||||||||   ||||||||||||||||    
T  8885654 gtgattattttgggattgaattgtgacattgtatttgtgaagatttcggttcttatgttgtaatgatatttttta 8885580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 10641811 - 10641895
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcata 285  Q
    ||||| |||||| |||||||||| |||||||  |||| |||||||||||||||||||||||||  |||||  |||||||||||||||    
T  10641811 aaagttcagtaacataactctggaaaaatgacaagtaggtgtggtaccacattcatataggtcgatagga--gagtccatatgcata 10641895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 31473577 - 31473648
Alignment:
Q  154 atgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactctggcaa 225  Q
    |||||||||||||| || ||| |||| |||| || ||||||||||||||||| ||||| ||| |||||||||    
T  31473577 atgttgagaaaagttcattaaaatatttctggcacccatgttgagaaaagtctagtaacatatctctggcaa 31473648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 14965747 - 14965685
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    |||||||| ||| ||||||| ||  |||||| ||||| |||||||||||||||||||||||||    
T  14965747 aaagtccaataacataactccggagaaatgaagagtaggtgtggtaccacattcatataggtc 14965685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 14980736 - 14980859
Alignment:
Q  163 aaagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatatag 259  Q
    |||||||||||||||||||||| |||   |||  ||  |||||||||||| ||| ||||||||||  |||| || || ||||||||||||| ||||||||    
T  14980736 aaagtccagtaacatatctctggcaaattatgacgatgaaagtccagtaacatacctctggcaaattatgacga-taggtgtggtaccacaatcatatag 14980834  T
Q  260 gtc-ttaggactgagtccatatgcata 285  Q
    ||| ||||||  |||||||||||||||    
T  14980835 gtcattagga--gagtccatatgcata 14980859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 20147244 - 20147292
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtacca 248  Q
    |||||||||||| ||||||||||||||||| | |||| | |||||||||    
T  20147244 aaagtccagtaacataactctggcaaaatggtcagtaggagtggtacca 20147292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 22185584 - 22185536
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtacca 248  Q
    |||||||||||| ||||||||||||||||| | |||| | |||||||||    
T  22185584 aaagtccagtaacataactctggcaaaatggtcagtaggagtggtacca 22185536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 22396659 - 22396719
Alignment:
Q  165 agtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactctggcaa 225  Q
    |||| ||||||||||||||| |||  ||||||| |||| |||||||| ||| |||||||||    
T  22396659 agtctagtaacatatctctggcaattatgttgaaaaaattccagtaacatatctctggcaa 22396719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 22396688 - 22396752
Alignment:
Q  120 ttgagaaaagtccagtacaatatttctggcaatcatgttgagaaaagtccagtaacatatctctg 184  Q
    |||| |||| |||||||  |||| |||||||| |||||||||||||||| ||||| ||| |||||    
T  22396688 ttgaaaaaattccagtaacatatctctggcaaccatgttgagaaaagtctagtaatataactctg 22396752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 1e-79; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 120 - 393
Target Start/End: Complemental strand, 6821194 - 6820927
Alignment:
Q  120 ttgagaaaagtccagtacaatatttctggcaatcatgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactc 219  Q
    |||||||||||||||||  ||| ||||| |||  ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  6821194 ttgagaaaagtccagtaacatacttctgacaactatgttgagaaaagtccagtaacatatctctggcaactatgttgagaaaagtccagtaatataactc 6821095  T
Q  220 tggcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagt 319  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||||||||| ||||||||||||||||||    
T  6821094 tggcaaaacgatgagtaggtgtggtaccacattcatataggtcttaggattgagtaaatatgcataaaaattgatgatgatttgtatttggtgaataagt 6820995  T
Q  320 gtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 393  Q
    ||||      ||| |||  ||||  ||||||||| | ||| || |||||||||||||| |||||||||||||||    
T  6820994 gtaa------ctgcgtgagacgataaaggtgattgtatgtcgatgttcttatgaagatggttattggtgactat 6820927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 200 - 457
Target Start/End: Complemental strand, 17418368 - 17418101
Alignment:
Q  200 aaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgat 297  Q
    |||||| ||||| ||| ||||||||||  |||| || || |||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||    
T  17418368 aaagtctagtaacatacctctggcaaattatgacga-taggtgtggtaccacattcatataggtcttaggactgagtccatatgcataaaatttgacgat 17418270  T
Q  298 gatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat---- 393  Q
    ||| ||||||||||||||||| ||||       ||||||  |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||        
T  17418269 gatttgtatttggtgaataagagtaa------ttgtgtgagacgatgaaggtgattatctgttgatgttcttatgaagatggttattggtgactatatgt 17418176  T
Q  394 -----------tttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatttt 457  Q
               |||  ||||||||||||||||||||||||||||||||||||||||||  | ||||| |||||||    
T  17418175 gttgtgactagtttgaaattgaattgtgacattgtgtttgtgaagattttggttcttaagctgtaattatatttt 17418101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 198 - 467
Target Start/End: Original strand, 3576588 - 3576868
Alignment:
Q  198 gaaaagtccagtaatataactctggcaaaatgatgag--taagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatg 295  Q
    |||||||||||||| ||| |||||||||  || |||   || ||||||||||||||||||||||||||||| |||  ||||||||||||| || ||||||    
T  3576588 gaaaagtccagtaacatatctctggcaacttggtgatgataggtgtggtaccacattcatataggtcttagtactacgtccatatgcataaaatttgatg 3576687  T
Q  296 atgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattg---------- 385  Q
    ||||| ||||||||||||||||||||||       ||||||  |  | |||||||||||| |||||| |||||||||||||| |||||||              
T  3576688 atgatatgtatttggtgaataagtgtaa------ttgtgtgagataatgaaggtgattatatgttgatgttcttatgaagatggttattggtgactatat 3576781  T
Q  386 -----gtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatattttttattgatgt 467  Q
         ||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||   |||||||||||||||||| ||||    
T  3576782 gttttgtgactattttggaattgaattgtgacattgtgtttgtgaaggttttagttcttatgatgtaatgatattttttattaatgt 3576868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 163 - 393
Target Start/End: Original strand, 19728707 - 19728933
Alignment:
Q  163 aaagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatatag 259  Q
    ||||||||||||||||||||||||||   |||  ||  |||||||||||| ||| || |||||||  |||| || || ||||||||||||||||||||||    
T  19728707 aaagtccagtaacatatctctgacaaattatgacgatgaaagtccagtaacatacctttggcaaattatgacga-taggtgtggtaccacattcatatag 19728805  T
Q  260 gtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgt 359  Q
    ||||||||| |||||||| ||||||| || |||| |||||| | | ||||||||||||||||||       ||||||  |||| |||| |||||||||||    
T  19728806 gtcttaggattgagtccacatgcataaaatttgacgatgatttctgtttggtgaataagtgtaa------ttgtgtgagacgatgaagatgattatctgt 19728899  T
Q  360 tgaggttcttatgaagattgttattggtgactat 393  Q
    ||| |||||||||||||| |||||||||||||||    
T  19728900 tgatgttcttatgaagatggttattggtgactat 19728933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 15873344 - 15873465
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||| |||||||||||    
T  15873344 aagtccagtaacatatctctgacaaactatgatgagaaaagtccagtaacataactctggctaaatgatgagtaggagtggtaccacaatcatataggtc 15873443  T
Q  263 -ttaggactgagtccatatgcata 285  Q
     ||||||  |||||||||||||||    
T  15873444 gttagga--gagtccatatgcata 15873465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 6821229 - 6821126
Alignment:
Q  122 gagaaaagtccagtacaatatttctggcaatcatgttgagaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactctg 221  Q
    ||||||| |||||||  ||| ||||| |||  |||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| ||| |||||    
T  6821229 gagaaaattccagtaacatacttctgacaactatgttgagaaaagtccagtaacatacttctgacaactatgttgagaaaagtccagtaacatatctctg 6821130  T
Q  222 gcaa 225  Q
    ||||    
T  6821129 gcaa 6821126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 16285528 - 16285590
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    |||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  16285528 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtaccacattcatataggtc 16285590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 11555636 - 11555552
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcata 285  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| ||||  |||||  |||||||||||||||    
T  11555636 aaagtccagtaacataactctggcaaaatgatgagtaggtgtggtaccgcattcatattggtcaatagga--gagtccatatgcata 11555552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 18557572 - 18557697
Alignment:
Q  161 gaaaagtccagtaacatatctctgacaaccatgttga-gaaaagtccagtaatataactctggcaaaatgatgag--taagtgtggtaccacattcatat 257  Q
    |||||||||||||| ||||||||| |||   || ||| |||||||||||||| ||| |||||||||  || |||   || || |||||||||||||||||    
T  18557572 gaaaagtccagtaatatatctctggcaatt-tgatgatgaaaagtccagtaacatatctctggcaacttggtgatgataggtatggtaccacattcatat 18557670  T
Q  258 aggtcttaggactgagtccatatgcat 284  Q
    ||||||||||| |||||||||||||||    
T  18557671 aggtcttaggaatgagtccatatgcat 18557697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 457
Target Start/End: Original strand, 19728954 - 19729013
Alignment:
Q  399 aattgaattgtgacattgtgtttgtgaag-attttggttcttattccgtaatgatatttt 457  Q
    |||||||||||||||||||||||||||||  ||||||||||||  | |||||||||||||    
T  19728954 aattgaattgtgacattgtgtttgtgaagttttttggttcttaagctgtaatgatatttt 19729013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 12228653 - 12228591
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    |||||||||||| |||||||||| ||||| | ||||| | || ||||||||||||||||||||    
T  12228653 aaagtccagtaacataactctggaaaaataacgagtaggcgttgtaccacattcatataggtc 12228591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 455
Target Start/End: Complemental strand, 6820907 - 6820850
Alignment:
Q  398 gaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatt 455  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||   |||||||||||    
T  6820907 gaattaaattttgacattgtgtttgtgaagatcttggttcttatgttgtaatgatatt 6820850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 9564058 - 9563958
Alignment:
Q  164 aagtccagtaacatatctctgac-aaccatgttgagaaaagtccagtaatataactctggcaaaatgatgag-taagtgtggtaccacattcatataggt 261  Q
    |||| |||||||||||||||| | ||| |||  ||||||||| |||||| ||||||||| ||||||| |||| || | |||||||||  ||||| |||||    
T  9564058 aagtacagtaacatatctctggcaaactatgacgagaaaagttcagtaacataactctgacaaaatgttgagatatgagtggtaccatgttcatgtaggt 9563959  T
Q  262 c 262  Q
    |    
T  9563958 c 9563958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 12136729 - 12136653
Alignment:
Q  207 agtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcata 285  Q
    ||||| |||||||||| ||||||||||||| |  |||||||||| ||||||||||| ||||||  || ||||||||||||    
T  12136729 agtaacataactctgg-aaaatgatgagtatgactggtaccacaatcatataggtcgttagga--gattccatatgcata 12136653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 34635928 - 34635980
Alignment:
Q  238 gtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaat 290  Q
    ||||||||||||||| |||||||||||||||   |||| |||| |||||||||    
T  34635928 gtgtggtaccacatttatataggtcttaggatgaagtctatatacatacaaat 34635980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 6e-66; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 35922654 - 35922845
Alignment:
Q  122 gagaaaagtccagtacaatatttctggcaatcatgttg-agaaaagtccagtaacatatctctgacaaccatgttgagaaaagtccagtaatataactct 220  Q
    |||||||||||||||  ||| |||||| ||| |||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  35922654 gagaaaagtccagtaacatacttctggaaattatgtgggagaaaagtccagtaacatatctctggcaactatgttgagaaaagtccagtaataaaactct 35922753  T
Q  221 ggcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtg 312  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  35922754 ggcaaaacgatgagtagatgtggtaccacattcatataggtcttaggactgagtccatatgcataaaaattgatgatgatttgtatttggtg 35922845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 199 - 460
Target Start/End: Original strand, 23247534 - 23247803
Alignment:
Q  199 aaaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatataggtcttaggact-gagtccatatgcatacaaattgatg 295  Q
    ||||||||||||||||| || ||| |||  |||| || || ||||||||||||||||||||||||||||||| | ||||||||||||||| || ||||||    
T  23247534 aaaagtccagtaatatacctttggaaaattatgacga-taggtgtggtaccacattcatataggtcttaggaattgagtccatatgcataaaatttgatg 23247632  T
Q  296 atgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattgg--------- 386  Q
    ||||| ||||||||| ||||||||||||       ||||||  | || ||||||||||||||||||| |||||||||| ||| ||||||||             
T  23247633 atgatttgtatttggcgaataagtgtaa------ttgtgtgagatgatgaaggtgattatctgttgatgttcttatgatgatggttattggtgactaatg 23247726  T
Q  387 ---tgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatttttta 460  Q
       |||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||   ||||||||||||||||    
T  23247727 ttttgactattttggaattgaattgtgacgtggtgtttgtgaaaattttggttcttatgatgtaatgatatttttta 23247803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 238 - 457
Target Start/End: Complemental strand, 23907492 - 23907263
Alignment:
Q  238 gtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 337  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||| || |||| |||||| ||||||||||||||||||||||       ||||||     
T  23907492 gtgtggtactacattcatataggtcttaggaatgagtccatatgcataaaatttgacgatgatttgtatttggtgaataagtgtaa------ttgtgtga 23907399  T
Q  338 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat---------------tttagaattgaattgtgacattgtgtttg 422  Q
     |||| |||||||||||||| |||| |||||||||||||| |||||||||||||||               ||| |||||||||||||||||||||||||    
T  23907398 gacgatgaaggtgattatcttttgatgttcttatgaagatggttattggtgactatatgtcttgtgactagtttggaattgaattgtgacattgtgtttg 23907299  T
Q  423 tgaag-attttggttcttattccgtaatgatatttt 457  Q
    |||||  ||||||||||||  | |||||||||||||    
T  23907298 tgaagctttttggttcttaagctgtaatgatatttt 23907263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 240 - 459
Target Start/End: Complemental strand, 22521435 - 22521207
Alignment:
Q  240 gtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaa 339  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||      |||||  |    
T  22521435 gtggtaccacattcataaaggtcttaggactgagtccatatccataaaaattaatgatgatttgtatttggtgaataagtgtaact------gtgtgaga 22521342  T
Q  340 cgacgaaggtgattatctgttgaggttcttatgaagattgttattg---------------gtgactattttagaattgaattgtgacattgtgtttgtg 424  Q
    ||| |||||||||||| |||| | |||||||| ||||| |||||||               ||||||||||| ||||| ||||||| ||||||| |||||    
T  22521341 cgatgaaggtgattatatgttaatgttcttataaagatggttattggtgactatatgtgttgtgactattttggaattaaattgtggcattgtgcttgtg 22521242  T
Q  425 aagattttggttcttattccgtaatgatatttttt 459  Q
    |||||||||||||||||   |||||||||||||||    
T  22521241 aagattttggttcttatgatgtaatgatatttttt 22521207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 13361500 - 13361402
Alignment:
Q  163 aaagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaa-tgatgagtaagtgtggtaccacattcatatag 259  Q
    |||||||||||||||| ||||| ||| | |||| |||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  13361500 aaagtccagtaacatacctctggcaaactatgtagagaaaagtccagtaacataactctggcaaaattgaagagtaggtgtggtaccacattcatatag 13361402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 44586894 - 44586955
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggt 261  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44586894 aaagtccagtaacataactctggcaaaatgatgagtaggtgtggtaccacattcatataggt 44586955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 261
Target Start/End: Original strand, 23656830 - 23656928
Alignment:
Q  164 aagtccagtaacatatctctg-acaaccatgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggt 261  Q
    ||||| ||||||||| ||||| | ||| ||| ||||||||| ||||||| |||||||||| |||| |||||||| | ||||||||||||||||||||||    
T  23656830 aagtctagtaacatacctctggaaaactatgatgagaaaagcccagtaacataactctggaaaaacgatgagtaggagtggtaccacattcatataggt 23656928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 32252570 - 32252636
Alignment:
Q  196 gagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||||||||||||||  |||||| |||||| |||||||||||||| ||||||||||    
T  32252570 gagaaaagtccagtaatataactctgcaaaaatggtgagtaggtgtggtaccacatacatataggtc 32252636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 460
Target Start/End: Original strand, 23246825 - 23246898
Alignment:
Q  387 tgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatttttta 460  Q
    |||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||   ||||||||||||||||    
T  23246825 tgactattttggaattgaattgtgacgtggtgtttgtgaaaattttggttcttatgatgtaatgatatttttta 23246898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 39527712 - 39527767
Alignment:
Q  386 gtgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttat 441  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  39527712 gtgactcttttggaattgaattgtgacgttgtgtttgtgaagattttggttcttat 39527767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 16858447 - 16858360
Alignment:
Q  196 gagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcat 284  Q
    |||||||||||  ||| |||||| ||||||||||| || || ||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  16858447 gagaaaagtccgataacataactttggcaaaatgacgaataggtgtggtaccacattcatataggtcgttagga--gagtccatatgcat 16858360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 24724912 - 24725013
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||| ||||| ||| | ||| ||||||||||||||||| |||||| || ||| ||| |||||| | |||||||||| || || ||||||    
T  24724912 aagtccagtaacatacctctggcaagctatgatgagaaaagtccagtaacataactttgacaatatggtgagtaggagtggtaccacgtttatgtaggtc 24725011  T
Q  263 tt 264  Q
    ||    
T  24725012 tt 24725013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 35922858 - 35922912
Alignment:
Q  339 acgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 393  Q
    |||| ||||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  35922858 acgatgaaggtgtttatctgttgatgttcttatgaagatgattattggtgactat 35922912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 18988136 - 18988180
Alignment:
Q  239 tgtggtaccacattcatataggtcttaggactgagtccatatgcat 284  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||    
T  18988136 tgtggtaccacattcatataggtcttagga-tgactccatatgcat 18988180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 23246698 - 23246751
Alignment:
Q  270 tgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaa 323  Q
    |||||||||||| ||| || ||||||||||| ||| ||||| ||||||||||||    
T  23246698 tgagtccatatgtataaaatttgatgatgatttgtgtttggcgaataagtgtaa 23246751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 238 - 389
Target Start/End: Complemental strand, 16954 - 16809
Alignment:
Q  238 gtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 337  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||| || |||| |||||| ||||||||||||||||||||||       ||||||     
T  16954 gtgtggtaccacattcatataggtcttagaaatgagtccatatgcataaaatttgacgatgatttgtatttggtgaataagtgtaa------ttgtgtga 16861  T
Q  338 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtga 389  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  16860 gacgacgaaggtgattatctgttgatgttcttatgaagatggttattggtga 16809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1043 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold1043
Description:

Target: scaffold1043; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 163 - 393
Target Start/End: Original strand, 1687 - 1913
Alignment:
Q  163 aaagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatatag 259  Q
    |||||||||||||||||||||| |||   |||  || ||||||||||||| ||| ||||||||||  |||| || || ||||||||||||||||||||||    
T  1687 aaagtccagtaacatatctctggcaaattatgacgataaaagtccagtaacatacctctggcaaattatgacga-taggtgtggtaccacattcatatag 1785  T
Q  260 gtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgt 359  Q
    |||||||||||||||||||||||||| || |||| |||||| ||| |||||||||||||| ||| |||||  |      |||| |||| ||||||| |||    
T  1786 gtcttaggactgagtccatatgcataaaatttgacgatgatttgtgtttggtgaataagtataattgtgttag------acgatgaagatgattatatgt 1879  T
Q  360 tgaggttcttatgaagattgttattggtgactat 393  Q
    ||| ||||||||||||||  ||||||||||||||    
T  1880 tgatgttcttatgaagatgattattggtgactat 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 222 - 329
Target Start/End: Original strand, 3089568 - 3089675
Alignment:
Q  222 gcaaaatgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgt 321  Q
    |||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  3089568 gcaaaacgatgagtaggtctggtaccacattcatataggtcttaggtctgagtccatatgcataaaaattgatgatgatttgtatttggtgaataagtgt 3089667  T
Q  322 aactgtgt 329  Q
    || |||||    
T  3089668 aattgtgt 3089675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 13477928 - 13477990
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  13477928 aaagtccagtaacataactctggaaaaatgatgagtaggtgtggtaccacattcatataggtc 13477990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 260
Target Start/End: Original strand, 4532170 - 4532267
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatatagg 260  Q
    ||||| ||||||||| ||||| ||| | ||| ||||||||||||||||| |||||| ||||||||||||||||| | ||||||||||| |||||||||    
T  4532170 aagtctagtaacatacctctggcaaactatgatgagaaaagtccagtaacataactatggcaaaatgatgagtaggagtggtaccacaatcatatagg 4532267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 16074791 - 16074890
Alignment:
Q  200 aaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgat 297  Q
    |||||||||||| ||| ||||||||||  |||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||||| || |||| |||    
T  16074791 aaagtccagtaacatacctctggcaaattatgacgag-aggtgtggtaccacatgcatataggtcttaggactgagtccatatgcataaaatttgacgat 16074889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 3089772 - 3089844
Alignment:
Q  387 tgactattttagaattgaattgtgacattgtgtttgtgaagattttggttcttattccgtaatgatatttttt 459  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||   |||||||||||||||    
T  3089772 tgactattttggaatcgaattgtgacattgtgtttgtgaagattttggttcctatgttgtaatgatatttttt 3089844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 284
Target Start/End: Original strand, 37946273 - 37946395
Alignment:
Q  163 aaagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaat-gatgagtaagtgtggtaccacattcatatagg 260  Q
    |||||||| ||||||| ||||||||| | |||| |||||||||||| ||| |||||||||||||||| || ||||| ||||| ||||||||||||| | |    
T  37946273 aaagtccaataacatacctctgacaaactatgtagagaaaagtccaataacataactctggcaaaatggaagagtaggtgtgttaccacattcatacatg 37946372  T
Q  261 tc-ttaggactgagtccatatgcat 284  Q
    || ||||||  ||||||||||||||    
T  37946373 tcgttagga--gagtccatatgcat 37946395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 11655149 - 11655065
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcata 285  Q
    |||||||| ||| |||||| ||||||||||| ||||| |||||||||||||||||||||||||  |||||  |||||||||||||||    
T  11655149 aaagtccaataacataactttggcaaaatgacgagtaggtgtggtaccacattcatataggtcgatagga--gagtccatatgcata 11655065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 284
Target Start/End: Complemental strand, 20025601 - 20025525
Alignment:
Q  207 agtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtct-taggactgagtccatatgcat 284  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||| |||||||||| |||||  ||||||||||||||    
T  20025601 agtaacataactctggtgaaataatgagtaggtgtggtaccacattaatataggtctatagga--gagtccatatgcat 20025525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 22615183 - 22615246
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgt--ggtaccacattcatataggt 261  Q
    |||||||||||  ||||||||| ||||||||  |||| ||||  ||||||||||||||||||||    
T  22615183 aaagtccagtagcataactctgtcaaaatgacaagtaggtgtgtggtaccacattcatataggt 22615246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 163 - 393
Target Start/End: Original strand, 17862506 - 17862732
Alignment:
Q  163 aaagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatatag 259  Q
    |||||||||||||||||||||| |||   |||  ||  |||||||||||| ||| || |||||||  |||| || || ||||||||||||||||||||||    
T  17862506 aaagtccagtaacatatctctggcaaattatgacgatgaaagtccagtaacatacctatggcaaattatgacga-taggtgtggtaccacattcatatag 17862604  T
Q  260 gtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgt 359  Q
    |||||||||||||||||||||||||| || |||| |||||| ||| ||||||||||| ||||||       ||||||  |||| | || |||||||||||    
T  17862605 gtcttaggactgagtccatatgcataaaatttgacgatgatttgtgtttggtgaataggtgtaa------ttgtgtgagacgatgtagatgattatctgt 17862698  T
Q  360 tgaggttcttatgaagattgttattggtgactat 393  Q
    ||| |||||||||||||| ||||||||| |||||    
T  17862699 tgatgttcttatgaagatggttattggttactat 17862732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 14422131 - 14422172
Alignment:
Q  242 ggtaccacattcatataggtcttaggactgagtccatatgcat 284  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  14422131 ggtaccacattcatataggtcttagg-gtgagtccatatgcat 14422172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 23658186 - 23658101
Alignment:
Q  200 aaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcata 285  Q
    |||||||||||| ||| ||||||||||  |||| || || ||||||||||||| ||||||||||| ||||||  |||||||||||||||    
T  23658186 aaagtccagtaacatacctctggcaaattatgacga-taggtgtggtaccacaatcatataggtcgttagga--gagtccatatgcata 23658101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 200 - 393
Target Start/End: Complemental strand, 142001 - 141813
Alignment:
Q  200 aaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgat 297  Q
    |||||||||||| ||| ||||||||||  |||| || || ||||||||||||||||||||||||||||||||||||||||| |||||| || |||| |||    
T  142001 aaagtccagtaacatacctctggcaaattatgacga-taggtgtggtaccacattcatataggtcttaggactgagtccatttgcataaaatttgacgat 141903  T
Q  298 gatctgtatttggtgaataagtgtaactgtgtctgtgtgtaacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat 393  Q
    ||| ||| ||||||||||||||||||       ||||||  |||| |||| ||||||| |||||  |||||||||||||| ||||| |||||||||    
T  141902 gatttgtgtttggtgaataagtgtaa------ttgtgtgagacgatgaagatgattatttgttgttgttcttatgaagatggttatcggtgactat 141813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 457
Target Start/End: Complemental strand, 141792 - 141732
Alignment:
Q  399 aattgaattgtgacattgtg-tttgtgaa-gattttggttcttattccgtaatgatatttt 457  Q
    |||||||||||||||||||| |||||||| | ||||||||||||  | |||||||||||||    
T  141792 aattgaattgtgacattgtgttttgtgaaggtttttggttcttaagctgtaatgatatttt 141732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 238 - 460
Target Start/End: Original strand, 18453 - 18684
Alignment:
Q  238 gtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgtctgtgtgt 337  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||| |||||  |         
T  18453 gtgtggtacgacattcatataggtcttaggactgagtccatatgcataaaaattgatgatgatttgtatttgacgaataagtgtaattgtgtgag----- 18547  T
Q  338 aacgacgaaggtgattatctgttgaggttcttatgaagattgttattggtgactat---------------tttagaattgaattgtgacattgtgtttg 422  Q
     | || |||||||| |||||||||| |||||||||  ||| |||||| ||||||||               ||| |||||||||| ||||||  || |||    
T  18548 -atgatgaaggtgactatctgttgatgttcttatggcgatggttattagtgactatatatgttttgactattttggaattgaattatgacatgctgattg 18646  T
Q  423 tgaagattttggttcttattccgtaatgatatttttta 460  Q
    |||||||||||||||||||   ||||||||||||||||    
T  18647 tgaagattttggttcttatgatgtaatgatatttttta 18684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 21974904 - 21974783
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||||||||||||||| | || |||||||| |||||||||||    
T  21974904 aagtccagtaacatatctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaggagttgtaccacaatcatataggtc 21974805  T
Q  263 -ttaggactgagtccatatgcata 285  Q
     ||||||  |||||||||||||||    
T  21974804 gttagga--gagtccatatgcata 21974783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 21997335 - 21997214
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||||||||||||||| | || |||||||| |||||||||||    
T  21997335 aagtccagtaacatatctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaggagttgtaccacaatcatataggtc 21997236  T
Q  263 -ttaggactgagtccatatgcata 285  Q
     ||||||  |||||||||||||||    
T  21997235 gttagga--gagtccatatgcata 21997214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 13929182 - 13929303
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||| ||||| ||| | ||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| || ||||||||    
T  13929182 aagtccagtaacatacctctggcaaactatgatgagaaaagtccagtaacataactctggcaaaatgatgagtaggagtggtaccacaatcttataggtc 13929281  T
Q  263 -ttaggactgagtccatatgcata 285  Q
     |||| |  |||||||||||||||    
T  13929282 gttagaa--gagtccatatgcata 13929303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 16363042 - 16363161
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    ||||||||||||||||||||| ||| | ||| ||||||||||||| ||| |  ||||||||||||||||||||| | ||||||||||| |||||||||||    
T  16363042 aagtccagtaacatatctctggcaaactatgatgagaaaagtccattaaca--actctggcaaaatgatgagtaggagtggtaccacaatcatataggtc 16363139  T
Q  263 -ttaggactgagtccatatgcata 285  Q
     ||||||  |||| ||||||||||    
T  16363140 gttagga--gagtacatatgcata 16363161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 22159475 - 22159358
Alignment:
Q  167 tccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatatagg-tctt 264  Q
    |||||||||||||||||| ||| | ||| ||||||||||| ||||| ||||||||||| |||||||||||| | ||||||||||| ||||||||| | ||    
T  22159475 tccagtaacatatctctggcaaactatgatgagaaaagtc-agtaacataactctggcgaaatgatgagtatgagtggtaccacaatcatataggttgtt 22159377  T
Q  265 aggactgagtccatatgcata 285  Q
    ||||  |||||||||||||||    
T  22159376 agga--gagtccatatgcata 22159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 13927329 - 13927392
Alignment:
Q  195 tgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatata 258  Q
    ||||||||||||||||| ||||||| ||||||||||||| || | ||||||||||| |||||||    
T  13927329 tgagaaaagtccagtaaaataactccggcaaaatgatgactaggagtggtaccacaatcatata 13927392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 17790556 - 17790498
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatata 258  Q
    |||||||||||| |||||| ||| ||||||| ||||| |||||||||| ||||||||||    
T  17790556 aaagtccagtaacataactttggaaaaatgacgagtaggtgtggtaccgcattcatata 17790498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 19098998 - 19098940
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatata 258  Q
    |||||||||||| |||||| ||| ||||||| ||||| |||||||||| ||||||||||    
T  19098998 aaagtccagtaacataactttggaaaaatgacgagtaggtgtggtaccgcattcatata 19098940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 4713270 - 4713393
Alignment:
Q  163 aaagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatatag 259  Q
    |||||||||||||||||||||| |||   |||  ||  |||||||||||| ||| ||||||||||  |||| || || ||||||||||||| ||||||||    
T  4713270 aaagtccagtaacatatctctggcaaattatgacgatgaaagtccagtaacatacctctggcaaattatgacga-taggtgtggtaccacaatcatatag 4713368  T
Q  260 gtc-ttaggactgagtccatatgcata 285  Q
    ||| ||||||  |||||||||||||||    
T  4713369 gtcattagga--gagtccatatgcata 4713393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 27871254 - 27871299
Alignment:
Q  238 gtgtggtaccacattcatataggtcttaggactgagtccatatgcat 284  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||    
T  27871254 gtgtggtaccacattcatataggtcaaagga-tgagtccatatgcat 27871299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 19019504 - 19019413
Alignment:
Q  238 gtgtggtaccacattcatataggtcttaggactgagtccatatgcatacaaattgatgatgatctgtatttggtgaataagtgtaactgtgt 329  Q
    |||| |||||||||||||||||||  ||||| | ||||||||| |||| |||||||||||||| ||||| || |||||||||||||||||||    
T  19019504 gtgtagtaccacattcatataggtaataggatttagtccatatacataaaaattgatgatgatttgtatatgatgaataagtgtaactgtgt 19019413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 24615019 - 24614936
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcat 284  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||||| ||||||  ||||||||||||||    
T  24615019 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtatgacattcatataggtcgttagga--gagtccatatgcat 24614936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 24711417 - 24711334
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcat 284  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||||| ||||||  ||||||||||||||    
T  24711417 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtatgacattcatataggtcgttagga--gagtccatatgcat 24711334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 24744413 - 24744330
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcat 284  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||||| ||||||  ||||||||||||||    
T  24744413 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtatgacattcatataggtcgttagga--gagtccatatgcat 24744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 24757179 - 24757096
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcat 284  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||||| ||||||  ||||||||||||||    
T  24757179 aaagtccagtaacataactctggcaaaatgacgagtaggtgtggtatgacattcatataggtcgttagga--gagtccatatgcat 24757096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 459
Target Start/End: Complemental strand, 19019386 - 19019313
Alignment:
Q  387 tgactattttagaattgaattgtgacattg-tgtttgtgaagattttggttcttattccgtaatgatatttttt 459  Q
    |||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||   ||||||||| |||||    
T  19019386 tgactattttggaattgaattgtaacattggtgtttatgaagattttggttcttatgttgtaatgatacttttt 19019313  T

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Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 13935423 - 13935351
Alignment:
Q  195 tgagaaaagtccagtaatataactctggcaaa--atgatgagtaagtgtggtaccacattcatataggtctta 265  Q
    |||||||| |||||||| ||||||||| ||||  ||||  |||| |||||||||||||||||||||| |||||    
T  13935423 tgagaaaaatccagtaacataactctgacaaactatgactagtaggtgtggtaccacattcatatagatctta 13935351  T

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Target: scaffold0057 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 40797 - 40693
Alignment:
Q  159 gagaaaagtccagtaacatatctctgacaaccatgttga-gaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatat 257  Q
    |||||||||||| ||||||| ||||  |||| |||| |  ||||||||||||||||||||||| |||||||| | ||||  |||||||||||||||||||    
T  40797 gagaaaagtccaataacatacctctagcaactatgtgggtgaaaagtccagtaatataactctagcaaaatggtaagtagatgtggtaccacattcatat 40698  T
Q  258 aggtc 262  Q
    |||||    
T  40697 aggtc 40693  T

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Target: scaffold1001 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 1064 - 980
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcata 285  Q
    ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||  |||||  |||||||||||||||    
T  1064 aaagtccaggaatataactctgacaaaatgacgagtaggtgtggtaccacattcatataggtcgatagga--gagtccatatgcata 980  T

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Target: scaffold0145 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 12188 - 12126
Alignment:
Q  200 aaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc 262  Q
    |||||||||||| |||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  12188 aaagtccagtaacataactctggcaaaatgacgagtaggtttggtaccacattcatataggtc 12126  T

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Target: scaffold0385 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 13892 - 13798
Alignment:
Q  164 aagtccagtaacatatctctgacaacc-atgttgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatatag 259  Q
    ||||||||||||||||||||| ||| | ||| ||||||||||||| ||| |  ||||||||||||||||||||| | ||||||||||| ||||||||    
T  13892 aagtccagtaacatatctctggcaaactatgatgagaaaagtccattaaca--actctggcaaaatgatgagtaggagtggtaccacaatcatatag 13798  T

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Target: scaffold0092 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 20092 - 20181
Alignment:
Q  195 tgagaaaagtccagtaatataactctggcaaaatgatgagtaagtgtggtaccacattcatataggtc-ttaggactgagtccatatgcata 285  Q
    ||||||||  ||||||| |||||||||||||||||||||||| | ||||||||||| ||||| ||||| ||||||  |||||||||||||||    
T  20092 tgagaaaatcccagtaacataactctggcaaaatgatgagtaggagtggtaccacaatcatacaggtcgttagga--gagtccatatgcata 20181  T

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Target: scaffold0094 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 5426 - 5472
Alignment:
Q  238 gtgtggtaccacattcatataggtcttaggactgagtccatatgcat 284  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5426 gtgtggtaccacattcatataggtcttaggaatgagtccatatgcat 5472  T

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Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 284
Target Start/End: Original strand, 14788 - 14875
Alignment:
Q  198 gaaaagtccagtaatataactctggcaaa---atgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcat 284  Q
    |||||||||||||| ||| |||||||||    ||||||| || ||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  14788 gaaaagtccagtaacatatctctggcaactcgatgatga-taggtgtggtacaacattcatataggtcttagga-tgagttcatatgcat 14875  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 43155406 - 43155490
Alignment:
Q  200 aaagtccagtaatataactctggcaaaa-tgatgagtaagtgtggtaccacattcatataggtcttaggactgagtccatatgcat 284  Q
    |||||||||||| | ||||||||||||| |||| |||| |||| || ||||||||||||||||| || || || ||||||||||||    
T  43155406 aaagtccagtaacacaactctggcaaaaatgataagtaggtgtagtgccacattcatataggtcataaga-tgggtccatatgcat 43155490  T

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